View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1705_low_63 (Length: 314)
Name: NF1705_low_63
Description: NF1705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1705_low_63 |
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Alignment Details
Target: chr1 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 23 - 298
Target Start/End: Original strand, 7925444 - 7925719
Alignment:
| Q |
23 |
ttgaacaaacacttctaaaaatagaattattaaaagaatcatacaataccaataaaaagttaaaataataacttctcatctaagttggaatgaaattctg |
122 |
Q |
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| T |
7925444 |
ttgaacaaacacttctaaaaatagaattattaaaagaatcatacaataccaataaaaagttaaaataataacttctcatctaagttgaaatgaaattctg |
7925543 |
T |
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| Q |
123 |
cattttaaattctttttcttacagaacttatataatttaacttatccataaacactacctataagcaatctttaacgaatgctgctagtttgaacaatca |
222 |
Q |
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| T |
7925544 |
cattttaaattctttttcttacagaacttatataatttaacttatccataaacactacctataagcaatctttaacgaatgctgctagtttgaacaatca |
7925643 |
T |
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| Q |
223 |
ttggttagactttacctaacaattaactcccaaccaaactccatattacgagtctcttttcctcgagataaggatt |
298 |
Q |
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| T |
7925644 |
ttgattagactttacctaacaattaactcccaaccaaactccatattacgagtctcttttcctcgagataaggatt |
7925719 |
T |
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