View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1706-Insertion-15 (Length: 285)
Name: NF1706-Insertion-15
Description: NF1706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1706-Insertion-15 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 8 - 285
Target Start/End: Original strand, 2244945 - 2245222
Alignment:
| Q |
8 |
gttattgacagttgaataaatcttacctataataacggttgcttggggagatgatgtaacgccggagctcttgtctcttgctgccatacatggtggcggc |
107 |
Q |
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| T |
2244945 |
gttattgacagttgaataaatcttacctataataacggttgcttggggagatgatgtaacgccggagctcttgtctcttgctgccatacatggtggcggc |
2245044 |
T |
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| Q |
108 |
accgagagatggaatgaatccggtaagactgtattggctgctagaatcatctttggtttgtttttgtttatcatttttacgaccaaaggactttattcca |
207 |
Q |
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| T |
2245045 |
accgagagatggaatgaatccggtaagactgtattggctgctagaatcatctttggtttgtttttgtttatcatttttacgaccaaaagactttattcca |
2245144 |
T |
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| Q |
208 |
aacatcttcatgatcttcctcgtaaaggggatcaaggagagacacactatgcattcatgtgttattttcttctcataa |
285 |
Q |
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| T |
2245145 |
aacatcttcatgatcttcctcgtaaaggggatcaaggagagacacactatgcattcatgtgttattttcttctcataa |
2245222 |
T |
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