View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17061_high_25 (Length: 373)
Name: NF17061_high_25
Description: NF17061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17061_high_25 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 12 - 373
Target Start/End: Complemental strand, 45069068 - 45068707
Alignment:
| Q |
12 |
cagaacctgtggtaaataagctactgataattaataattagcccttgaatgctttagcaaccgtatttgtggcttaaattgcaagtaataaagagaaaag |
111 |
Q |
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| T |
45069068 |
cagaacatgtggtaaataagctactgataattaataattagcccttgaatgctttagcaaccgtatttgtggcttaaattgcaagtaataaagagaaaag |
45068969 |
T |
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| Q |
112 |
aaaggggccacttaaatgattatgtaagaaaaagagaagtcacattgagaagcagaaaatcaatattccttccttgaactaaggtattgccgataagggc |
211 |
Q |
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| T |
45068968 |
aaaggggccacttaaatgattatgtaagaaaaagagaagtcacattgagaagcagaaaatcaatattccttccttgaactaaggtattgccgataagggc |
45068869 |
T |
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| Q |
212 |
acttcacacacacagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttag |
311 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068868 |
acttcacactcacagtaacccctttcccttccagtgcattgatttgaacaatcaatgcaattggttttggcctcattcatggtgatgattctccacttag |
45068769 |
T |
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| Q |
312 |
aacaagagacaaaacattggcctacaagtagcacgaactcatcactcatcaaaacagaactt |
373 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45068768 |
aacaagagacaaaacattggcctacaagtagcacgaactcatcactcatcaaaacagaactt |
45068707 |
T |
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