View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17061_high_31 (Length: 325)
Name: NF17061_high_31
Description: NF17061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17061_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 38 - 316
Target Start/End: Original strand, 30633377 - 30633652
Alignment:
| Q |
38 |
ataataaatatgttcaaattgactttttatcttttaagataaatttgtcagtagtaataaggatccgactcctctaaaacgtacagtttgtaagatggag |
137 |
Q |
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| T |
30633377 |
ataataaatatgttaaaattgactttttatcttt-aagataaatttgtcattagtaataaggatccgactcctctaaaacgtgcagtttgtaagatggag |
30633475 |
T |
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| Q |
138 |
aaatcgagagttttcttttttgacaagatggagaaatcaagagttgataatttaaccatcataattaatttgttatgcatgtagtacatatataataaga |
237 |
Q |
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| T |
30633476 |
aaatcgagagtttacttttttgacaaaatggagaaatcaagagttgataatttaaccatcataattaatttgttatgcatgtagtacatatataataaga |
30633575 |
T |
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| Q |
238 |
aacattgatcgcttcttnnnnnnnnnncattgatctatttatcaattaactcactttattttatctagctcagaattat |
316 |
Q |
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| T |
30633576 |
aacattgatcgcttcttaaaaaaaaa--attgatctatttatcaattaactcactttattttatctagctcagagttat |
30633652 |
T |
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