View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17061_high_39 (Length: 273)

Name: NF17061_high_39
Description: NF17061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17061_high_39
NF17061_high_39
[»] chr6 (46 HSPs)
chr6 (17-262)||(364037-364282)
chr6 (23-174)||(24059722-24059874)
chr6 (28-222)||(35225491-35225684)
chr6 (23-254)||(21598505-21598726)
chr6 (23-132)||(17136901-17137011)
chr6 (179-251)||(17136907-17136980)
chr6 (23-254)||(9982730-9982950)
chr6 (26-108)||(35225458-35225541)
chr6 (23-108)||(21598502-21598588)
chr6 (183-254)||(17136844-17136916)
chr6 (23-122)||(17342621-17342721)
chr6 (25-221)||(2761495-2761680)
chr6 (145-254)||(35050596-35050704)
chr6 (23-132)||(10356432-10356542)
chr6 (14-110)||(9982718-9982815)
chr6 (58-110)||(2761494-2761546)
chr6 (25-96)||(9982936-9983008)
chr6 (183-254)||(10356321-10356393)
chr6 (23-110)||(13273125-13273210)
chr6 (155-222)||(21598625-21598690)
chr6 (140-222)||(17342605-17342685)
chr6 (178-254)||(10356462-10356539)
chr6 (179-254)||(24059725-24059801)
chr6 (27-97)||(35050731-35050802)
chr6 (184-222)||(9982936-9982974)
chr6 (25-98)||(21598710-21598784)
chr6 (29-97)||(9982673-9982742)
chr6 (25-97)||(10356260-10356333)
chr6 (180-221)||(17342534-17342575)
chr6 (179-254)||(2761603-2761679)
chr6 (188-254)||(3895756-3895821)
chr6 (183-254)||(10356261-10356333)
chr6 (25-97)||(24059666-24059737)
chr6 (25-96)||(35225397-35225469)
chr6 (179-238)||(364062-364121)
chr6 (26-101)||(364199-364274)
chr6 (23-97)||(10356318-10356393)
chr6 (183-222)||(17342706-17342745)
chr6 (183-214)||(19557904-19557935)
chr6 (27-96)||(35050847-35050917)
chr6 (184-253)||(35050847-35050917)
chr6 (195-251)||(6140447-6140504)
chr6 (26-110)||(13273258-13273342)
chr6 (182-254)||(21598710-21598783)
chr6 (183-254)||(10356527-10356599)
chr6 (183-254)||(13273068-13273140)
[»] chr2 (58 HSPs)
chr2 (23-252)||(31630127-31630354)
chr2 (23-254)||(25894965-25895196)
chr2 (15-224)||(3876818-3877026)
chr2 (23-222)||(5009216-5009417)
chr2 (28-245)||(36694383-36694589)
chr2 (28-238)||(12612448-12612664)
chr2 (114-221)||(4511482-4511587)
chr2 (140-257)||(29379856-29379973)
chr2 (23-132)||(44556582-44556692)
chr2 (23-114)||(1316092-1316184)
chr2 (28-132)||(14166359-14166463)
chr2 (60-143)||(4188657-4188740)
chr2 (23-97)||(36217208-36217281)
chr2 (59-156)||(11791745-11791842)
chr2 (28-108)||(31630127-31630208)
chr2 (179-254)||(31630277-31630351)
chr2 (23-108)||(9500962-9501048)
chr2 (29-133)||(4188982-4189087)
chr2 (151-223)||(9500997-9501067)
chr2 (183-254)||(1316035-1316107)
chr2 (23-110)||(5009366-5009453)
chr2 (179-254)||(43699440-43699516)
chr2 (25-107)||(25894964-25895047)
chr2 (183-254)||(36217208-36217278)
chr2 (179-252)||(3876939-3877013)
chr2 (57-135)||(4511940-4512018)
chr2 (25-106)||(43699435-43699517)
chr2 (25-97)||(5009438-5009510)
chr2 (59-132)||(30265473-30265546)
chr2 (177-222)||(36694513-36694558)
chr2 (158-221)||(5009257-5009318)
chr2 (139-222)||(33847597-33847678)
chr2 (23-110)||(3876785-3876872)
chr2 (179-221)||(6694122-6694164)
chr2 (179-221)||(11791800-11791842)
chr2 (189-251)||(36217155-36217217)
chr2 (23-85)||(36217161-36217223)
chr2 (182-252)||(5009160-5009232)
chr2 (24-96)||(25895182-25895255)
chr2 (179-223)||(1316127-1316171)
chr2 (179-235)||(8035471-8035527)
chr2 (179-238)||(12612462-12612522)
chr2 (179-238)||(25895117-25895177)
chr2 (183-254)||(33847698-33847770)
chr2 (57-132)||(8035440-8035515)
chr2 (87-138)||(14166022-14166073)
chr2 (184-254)||(25895182-25895253)
chr2 (184-254)||(44556585-44556656)
chr2 (179-221)||(4511942-4511984)
chr2 (26-107)||(29379888-29379970)
chr2 (179-220)||(4188657-4188698)
chr2 (58-107)||(4512049-4512098)
chr2 (28-98)||(5009160-5009232)
chr2 (191-251)||(14166460-14166521)
chr2 (25-97)||(33847698-33847771)
chr2 (179-215)||(4511871-4511907)
chr2 (179-234)||(30265459-30265515)
chr2 (183-238)||(44556541-44556597)
[»] chr3 (98 HSPs)
chr3 (23-222)||(40286331-40286527)
chr3 (14-254)||(25848347-25848587)
chr3 (23-221)||(32186556-32186753)
chr3 (14-222)||(47891202-47891409)
chr3 (59-221)||(43650078-43650239)
chr3 (59-221)||(27768400-27768560)
chr3 (29-221)||(40209738-40209918)
chr3 (25-143)||(36900033-36900152)
chr3 (23-252)||(14624104-14624321)
chr3 (23-153)||(28813894-28814025)
chr3 (24-251)||(36374861-36375075)
chr3 (23-108)||(252103-252189)
chr3 (23-108)||(7607680-7607765)
chr3 (25-223)||(47069620-47069807)
chr3 (14-251)||(47573743-47573969)
chr3 (146-221)||(14964923-14964996)
chr3 (135-222)||(36667239-36667324)
chr3 (23-122)||(47573876-47573975)
chr3 (155-222)||(47891299-47891364)
chr3 (179-252)||(28813899-28813973)
chr3 (25-97)||(47069527-47069600)
chr3 (14-110)||(47069576-47069673)
chr3 (179-251)||(7607687-7607759)
chr3 (23-110)||(14964887-14964974)
chr3 (183-254)||(25848287-25848359)
chr3 (148-254)||(26724070-26724175)
chr3 (164-254)||(46337562-46337651)
chr3 (183-254)||(50332698-50332770)
chr3 (179-222)||(26976497-26976540)
chr3 (183-238)||(30955011-30955066)
chr3 (183-238)||(30970823-30970878)
chr3 (23-101)||(46337559-46337638)
chr3 (26-174)||(5442515-5442665)
chr3 (23-92)||(25848568-25848638)
chr3 (31-97)||(28813843-28813909)
chr3 (163-254)||(39541415-39541506)
chr3 (29-110)||(39714551-39714633)
chr3 (26-110)||(13902996-13903081)
chr3 (158-222)||(25848480-25848542)
chr3 (29-97)||(46337505-46337574)
chr3 (25-97)||(47891385-47891458)
chr3 (25-97)||(50332698-50332771)
chr3 (146-221)||(252140-252213)
chr3 (25-96)||(18020088-18020160)
chr3 (183-254)||(26724275-26724347)
chr3 (183-254)||(28814063-28814135)
chr3 (14-101)||(40286286-40286374)
chr3 (155-221)||(18020001-18020065)
chr3 (184-254)||(18020088-18020159)
chr3 (25-143)||(26976375-26976494)
chr3 (183-238)||(28813854-28813909)
chr3 (29-108)||(36374997-36375075)
chr3 (180-254)||(45131439-45131514)
chr3 (59-110)||(50332527-50332578)
chr3 (158-254)||(14624107-14624201)
chr3 (15-132)||(18019992-18020110)
chr3 (35-97)||(36375066-36375128)
chr3 (23-104)||(36667278-36667360)
chr3 (25-101)||(39541429-39541507)
chr3 (29-174)||(51833335-51833481)
chr3 (25-97)||(26724275-26724348)
chr3 (179-243)||(27768377-27768442)
chr3 (25-97)||(28814063-28814136)
chr3 (179-251)||(40209738-40209810)
chr3 (199-251)||(42865968-42866021)
chr3 (28-116)||(14624233-14624321)
chr3 (26-97)||(25848287-25848359)
chr3 (183-254)||(32186462-32186534)
chr3 (25-100)||(45131438-45131514)
chr3 (88-132)||(45131556-45131600)
chr3 (183-223)||(46337534-46337574)
chr3 (183-254)||(47891385-47891457)
chr3 (179-222)||(3169561-3169604)
chr3 (28-83)||(39714639-39714694)
chr3 (26-97)||(40209938-40210008)
chr3 (191-254)||(40209945-40210008)
chr3 (26-108)||(43650044-43650127)
chr3 (179-252)||(43650196-43650271)
chr3 (179-222)||(50332526-50332569)
chr3 (146-216)||(54343425-54343492)
chr3 (188-222)||(5442548-5442582)
chr3 (183-252)||(39714624-39714694)
chr3 (23-108)||(47891166-47891252)
chr3 (184-221)||(252080-252117)
chr3 (186-258)||(13903072-13903145)
chr3 (179-251)||(36667141-36667213)
chr3 (184-252)||(36900140-36900209)
chr3 (183-247)||(47891116-47891181)
chr3 (179-251)||(51833408-51833481)
chr3 (183-223)||(3169745-3169785)
chr3 (23-114)||(26724199-26724290)
chr3 (30-106)||(27657986-27658062)
chr3 (194-234)||(41165868-41165908)
chr3 (179-222)||(45131525-45131569)
chr3 (183-238)||(45131670-45131726)
chr3 (183-254)||(47069528-47069600)
chr3 (183-254)||(47573695-47573767)
chr3 (58-110)||(54343349-54343400)
[»] chr7 (58 HSPs)
chr7 (35-254)||(43258304-43258522)
chr7 (23-239)||(4048259-4048475)
chr7 (23-204)||(3198268-3198448)
chr7 (29-221)||(40951724-40951918)
chr7 (23-167)||(27280671-27280816)
chr7 (23-222)||(6694588-6694774)
chr7 (23-110)||(11975504-11975592)
chr7 (23-108)||(44293966-44294052)
chr7 (23-143)||(30869559-30869680)
chr7 (25-108)||(6694724-6694808)
chr7 (140-254)||(42312819-42312932)
chr7 (155-251)||(40951823-40951918)
chr7 (59-132)||(29019342-29019415)
chr7 (26-101)||(6069262-6069338)
chr7 (183-254)||(29710320-29710392)
chr7 (155-222)||(29710499-29710564)
chr7 (23-106)||(41666201-41666285)
chr7 (184-254)||(42312997-42313068)
chr7 (158-222)||(11975622-11975685)
chr7 (178-251)||(27576531-27576605)
chr7 (179-221)||(29019342-29019384)
chr7 (179-245)||(43258456-43258522)
chr7 (183-254)||(27576596-27576668)
chr7 (183-254)||(42312759-42312831)
chr7 (183-254)||(44294037-44294109)
chr7 (28-98)||(6694533-6694604)
chr7 (23-128)||(11975614-11975721)
chr7 (186-251)||(4048205-4048271)
chr7 (191-252)||(46713213-46713275)
chr7 (147-254)||(11975507-11975613)
chr7 (25-97)||(27280874-27280947)
chr7 (25-97)||(29710319-29710392)
chr7 (25-97)||(31453047-31453120)
chr7 (25-97)||(42312758-42312831)
chr7 (147-238)||(44293943-44294033)
chr7 (183-251)||(11975451-11975519)
chr7 (29-97)||(11975451-11975519)
chr7 (191-254)||(29710380-29710444)
chr7 (183-254)||(31453047-31453119)
chr7 (183-222)||(27280874-27280913)
chr7 (29-94)||(4048205-4048271)
chr7 (183-221)||(22750350-22750388)
chr7 (119-215)||(26185847-26185939)
chr7 (24-97)||(27576596-27576670)
chr7 (183-252)||(40951634-40951703)
chr7 (183-221)||(42313056-42313094)
chr7 (26-94)||(44293780-44293845)
chr7 (158-223)||(44293864-44293927)
chr7 (179-220)||(27280709-27280750)
chr7 (183-255)||(30869665-30869738)
chr7 (134-214)||(41666245-41666323)
chr7 (59-108)||(44293866-44293915)
chr7 (29-108)||(4048407-4048487)
chr7 (183-238)||(6694607-6694662)
chr7 (88-156)||(22026410-22026477)
chr7 (23-110)||(27576523-27576611)
chr7 (183-254)||(29710585-29710657)
chr7 (183-254)||(30662155-30662227)
[»] chr1 (39 HSPs)
chr1 (28-219)||(18981086-18981274)
chr1 (24-222)||(52913233-52913430)
chr1 (23-251)||(2633208-2633436)
chr1 (74-251)||(1173075-1173249)
chr1 (23-123)||(18608635-18608736)
chr1 (14-254)||(18608638-18608868)
chr1 (69-150)||(41007425-41007506)
chr1 (14-132)||(26879571-26879690)
chr1 (23-222)||(33650455-33650645)
chr1 (29-122)||(1173075-1173167)
chr1 (23-116)||(40892486-40892579)
chr1 (183-254)||(7489959-7490031)
chr1 (29-90)||(18204925-18204986)
chr1 (23-122)||(52913196-52913297)
chr1 (87-151)||(38699114-38699178)
chr1 (23-97)||(7489956-7490031)
chr1 (183-222)||(52913172-52913211)
chr1 (20-97)||(26879666-26879744)
chr1 (28-110)||(6314353-6314437)
chr1 (24-100)||(34173316-34173393)
chr1 (29-152)||(38698916-38699036)
chr1 (25-97)||(40892564-40892637)
chr1 (183-254)||(26879666-26879738)
chr1 (179-223)||(41007474-41007518)
chr1 (179-223)||(52913352-52913396)
chr1 (158-254)||(34173318-34173412)
chr1 (179-254)||(40892501-40892576)
chr1 (183-221)||(33650493-33650531)
chr1 (179-221)||(36956477-36956519)
chr1 (183-221)||(40892564-40892602)
chr1 (183-251)||(52913034-52913104)
chr1 (25-54)||(18608537-18608566)
chr1 (28-108)||(18981052-18981133)
chr1 (179-252)||(18981201-18981274)
chr1 (145-217)||(36956361-36956431)
chr1 (179-220)||(38698944-38698985)
chr1 (179-223)||(2633357-2633401)
chr1 (81-117)||(26879516-26879552)
chr1 (182-222)||(33650431-33650471)
[»] chr8 (67 HSPs)
chr8 (23-221)||(36052929-36053127)
chr8 (59-223)||(9399908-9400070)
chr8 (14-223)||(27127966-27128165)
chr8 (35-212)||(14550070-14550243)
chr8 (106-254)||(24827417-24827564)
chr8 (92-220)||(27855652-27855777)
chr8 (14-222)||(41151453-41151650)
chr8 (23-108)||(20209454-20209540)
chr8 (23-108)||(20229162-20229248)
chr8 (29-132)||(24083206-24083305)
chr8 (25-97)||(6220448-6220521)
chr8 (183-251)||(15563848-15563916)
chr8 (29-110)||(27127938-27128019)
chr8 (25-97)||(24909669-24909742)
chr8 (20-96)||(27128142-27128218)
chr8 (140-252)||(6220348-6220458)
chr8 (180-252)||(15564043-15564116)
chr8 (25-97)||(24827356-24827429)
chr8 (25-97)||(41151404-41151477)
chr8 (158-222)||(41151498-41151560)
chr8 (179-222)||(9400027-9400071)
chr8 (183-254)||(20209525-20209597)
chr8 (183-254)||(20229233-20229305)
chr8 (183-222)||(14550276-14550315)
chr8 (59-110)||(28618829-28618880)
chr8 (24-97)||(16912999-16913073)
chr8 (183-252)||(27052659-27052729)
chr8 (178-251)||(36053047-36053121)
chr8 (29-122)||(41151586-41151680)
chr8 (29-97)||(9400092-9400161)
chr8 (147-238)||(20209431-20209521)
chr8 (147-238)||(20229139-20229229)
chr8 (81-154)||(22813459-22813532)
chr8 (177-222)||(24909603-24909648)
chr8 (145-222)||(27052567-27052638)
chr8 (23-108)||(27052592-27052674)
chr8 (23-110)||(6220376-6220463)
chr8 (25-96)||(9399815-9399887)
chr8 (28-120)||(14895126-14895218)
chr8 (14-101)||(24909605-24909693)
chr8 (183-254)||(24909669-24909741)
chr8 (181-221)||(29427958-29427998)
chr8 (185-251)||(41151673-41151741)
chr8 (184-254)||(27052408-27052479)
chr8 (183-222)||(27052501-27052540)
chr8 (179-222)||(28618838-28618881)
chr8 (183-222)||(41151438-41151477)
chr8 (23-120)||(9399873-9399970)
chr8 (26-94)||(20209268-20209333)
chr8 (158-223)||(20209352-20209415)
chr8 (26-94)||(20228976-20229041)
chr8 (158-223)||(20229060-20229123)
chr8 (183-221)||(24083296-24083334)
chr8 (59-137)||(24793055-24793133)
chr8 (28-97)||(27052659-27052729)
chr8 (25-86)||(27127877-27127938)
chr8 (179-221)||(27128076-27128118)
chr8 (184-254)||(27128142-27128212)
chr8 (25-97)||(6220182-6220255)
chr8 (59-108)||(20209354-20209403)
chr8 (59-108)||(20229062-20229111)
chr8 (182-219)||(22813144-22813181)
chr8 (29-66)||(38415029-38415066)
chr8 (203-252)||(38415076-38415125)
chr8 (183-223)||(6220448-6220488)
chr8 (29-97)||(15563848-15563916)
chr8 (24-107)||(36052893-36052977)
[»] chr4 (96 HSPs)
chr4 (42-254)||(12592255-12592467)
chr4 (39-238)||(45787099-45787298)
chr4 (23-222)||(40147009-40147206)
chr4 (41-223)||(51950545-51950726)
chr4 (98-257)||(24369186-24369344)
chr4 (28-156)||(17231990-17232119)
chr4 (61-221)||(41519237-41519395)
chr4 (23-222)||(2787944-2788138)
chr4 (155-255)||(26782352-26782450)
chr4 (27-215)||(55617441-55617627)
chr4 (27-215)||(55624745-55624931)
chr4 (23-122)||(45038356-45038456)
chr4 (134-221)||(12498714-12498799)
chr4 (23-106)||(41083111-41083195)
chr4 (88-221)||(50290215-50290354)
chr4 (14-128)||(9999337-9999452)
chr4 (23-133)||(11884673-11884784)
chr4 (119-254)||(12697142-12697271)
chr4 (145-254)||(45038345-45038453)
chr4 (23-221)||(24684142-24684326)
chr4 (29-222)||(41083147-41083328)
chr4 (14-222)||(53863365-53863562)
chr4 (158-254)||(12498802-12498897)
chr4 (25-110)||(26782485-26782571)
chr4 (28-96)||(2788160-2788229)
chr4 (155-254)||(26782472-26782570)
chr4 (23-110)||(40395156-40395244)
chr4 (23-110)||(46196167-46196255)
chr4 (158-221)||(51950564-51950625)
chr4 (179-245)||(12592248-12592315)
chr4 (26-220)||(25055941-25056135)
chr4 (180-223)||(40395191-40395234)
chr4 (23-211)||(2470002-2470188)
chr4 (181-254)||(2470111-2470185)
chr4 (179-221)||(2787979-2788021)
chr4 (183-254)||(11884615-11884688)
chr4 (24-97)||(12498885-12498959)
chr4 (179-221)||(17232022-17232064)
chr4 (24-97)||(21322035-21322109)
chr4 (23-108)||(40147156-40147242)
chr4 (24-97)||(40147227-40147301)
chr4 (156-221)||(41083234-41083297)
chr4 (184-250)||(12498623-12498691)
chr4 (25-97)||(41083053-41083126)
chr4 (29-97)||(50290403-50290472)
chr4 (183-251)||(50290403-50290472)
chr4 (183-254)||(2469899-2469971)
chr4 (140-254)||(7246188-7246301)
chr4 (26-97)||(7246289-7246361)
chr4 (23-106)||(11884811-11884895)
chr4 (183-254)||(12498885-12498957)
chr4 (178-222)||(53863410-53863454)
chr4 (184-254)||(7246052-7246123)
chr4 (25-97)||(11884614-11884688)
chr4 (179-238)||(40147028-40147087)
chr4 (29-95)||(45787299-45787365)
chr4 (158-254)||(40395281-40395376)
chr4 (29-110)||(53863510-53863592)
chr4 (24-108)||(12592384-12592469)
chr4 (26-97)||(2469899-2469971)
chr4 (183-254)||(7245992-7246064)
chr4 (23-110)||(7246216-7246304)
chr4 (26-97)||(45038441-45038513)
chr4 (183-254)||(45038441-45038513)
chr4 (191-254)||(55617623-55617687)
chr4 (191-254)||(55624927-55624991)
chr4 (23-101)||(12498677-12498756)
chr4 (195-238)||(12698010-12698052)
chr4 (183-222)||(46196143-46196182)
chr4 (24-83)||(50290181-50290239)
chr4 (23-96)||(7246049-7246123)
chr4 (183-221)||(7246289-7246327)
chr4 (29-110)||(9999482-9999564)
chr4 (189-254)||(17236774-17236840)
chr4 (183-221)||(21322035-21322073)
chr4 (183-221)||(40146986-40147024)
chr4 (183-221)||(44057328-44057366)
chr4 (183-221)||(45787239-45787277)
chr4 (23-128)||(46196292-46196398)
chr4 (23-120)||(51950663-51950761)
chr4 (184-221)||(2788160-2788197)
chr4 (25-97)||(7245991-7246064)
chr4 (183-251)||(25055884-25055953)
chr4 (24-72)||(25056186-25056235)
chr4 (25-97)||(41083319-41083392)
chr4 (183-220)||(45038281-45038318)
chr4 (185-222)||(53863350-53863387)
chr4 (183-238)||(53863583-53863640)
chr4 (183-238)||(2470173-2470229)
chr4 (25-92)||(9999288-9999356)
chr4 (23-78)||(11966795-11966851)
chr4 (183-254)||(41083054-41083126)
chr4 (183-254)||(41083319-41083391)
chr4 (28-87)||(45038191-45038251)
chr4 (158-221)||(55617534-55617594)
chr4 (158-221)||(55624838-55624898)
[»] chr5 (100 HSPs)
chr5 (26-254)||(1996202-1996430)
chr5 (23-254)||(16327155-16327376)
chr5 (23-110)||(16327291-16327379)
chr5 (14-223)||(4942990-4943190)
chr5 (29-221)||(5746189-5746381)
chr5 (23-222)||(28559328-28559516)
chr5 (98-238)||(38682727-38682866)
chr5 (74-238)||(35813397-35813559)
chr5 (23-254)||(23661939-23662159)
chr5 (178-254)||(23796556-23796631)
chr5 (23-252)||(14604122-14604341)
chr5 (14-252)||(25456323-25456550)
chr5 (26-153)||(7209848-7209976)
chr5 (28-222)||(33491605-33491786)
chr5 (23-134)||(35461493-35461605)
chr5 (26-136)||(36760764-36760875)
chr5 (158-254)||(20927905-20928000)
chr5 (23-132)||(12713055-12713167)
chr5 (23-132)||(12774319-12774431)
chr5 (33-117)||(28559302-28559387)
chr5 (28-148)||(36759665-36759786)
chr5 (29-132)||(10827275-10827379)
chr5 (183-254)||(32361168-32361240)
chr5 (23-252)||(35811967-35812196)
chr5 (23-222)||(37642851-37643038)
chr5 (119-238)||(10074068-10074186)
chr5 (183-252)||(19550101-19550171)
chr5 (23-128)||(20927902-20928008)
chr5 (158-254)||(25456335-25456430)
chr5 (25-97)||(40980710-40980783)
chr5 (179-238)||(1996218-1996278)
chr5 (141-251)||(20181404-20181513)
chr5 (25-97)||(25456275-25456347)
chr5 (179-254)||(4943100-4943178)
chr5 (23-97)||(17400812-17400887)
chr5 (23-110)||(35813491-35813578)
chr5 (179-221)||(7209882-7209924)
chr5 (183-251)||(14604072-14604137)
chr5 (183-252)||(23661881-23661951)
chr5 (183-252)||(23796619-23796689)
chr5 (25-97)||(1996141-1996214)
chr5 (183-254)||(4943226-4943299)
chr5 (155-254)||(16327158-16327256)
chr5 (14-123)||(17400724-17400836)
chr5 (179-251)||(35461637-35461710)
chr5 (183-219)||(10827143-10827179)
chr5 (195-251)||(12712424-12712480)
chr5 (29-85)||(12712424-12712480)
chr5 (195-251)||(12773688-12773744)
chr5 (29-85)||(12773688-12773744)
chr5 (23-110)||(17400601-17400689)
chr5 (23-107)||(23661936-23662019)
chr5 (23-107)||(23796551-23796634)
chr5 (183-254)||(35461701-35461773)
chr5 (158-221)||(36760780-36760841)
chr5 (183-254)||(38680630-38680702)
chr5 (183-254)||(40980711-40980783)
chr5 (183-256)||(16327364-16327436)
chr5 (183-222)||(20928081-20928120)
chr5 (27-97)||(23662144-23662215)
chr5 (156-222)||(35461529-35461593)
chr5 (183-252)||(12713152-12713222)
chr5 (183-252)||(12774416-12774486)
chr5 (23-120)||(28022130-28022228)
chr5 (20-97)||(32361162-32361240)
chr5 (179-221)||(35187994-35188036)
chr5 (25-153)||(7210214-7210336)
chr5 (183-251)||(20927848-20927917)
chr5 (28-97)||(25456540-25456609)
chr5 (23-123)||(35461615-35461716)
chr5 (26-78)||(1649473-1649524)
chr5 (183-254)||(1996142-1996214)
chr5 (179-238)||(5746308-5746368)
chr5 (23-103)||(10827164-10827243)
chr5 (183-238)||(16327114-16327170)
chr5 (183-223)||(17400577-17400616)
chr5 (183-254)||(17400812-17400884)
chr5 (183-254)||(35461436-35461508)
chr5 (183-254)||(35812181-35812253)
chr5 (179-222)||(7210266-7210309)
chr5 (158-251)||(10827287-10827379)
chr5 (155-252)||(36759665-36759761)
chr5 (30-179)||(40980844-40980994)
chr5 (179-254)||(14604125-14604202)
chr5 (28-97)||(19550101-19550171)
chr5 (28-97)||(23661881-23661951)
chr5 (28-97)||(23796619-23796689)
chr5 (124-221)||(28022097-28022191)
chr5 (179-217)||(35813386-35813424)
chr5 (183-221)||(37032963-37033001)
chr5 (23-108)||(37642988-37643074)
chr5 (28-92)||(1649341-1649406)
chr5 (29-97)||(4943166-4943235)
chr5 (23-107)||(5746152-5746237)
chr5 (25-102)||(6588073-6588148)
chr5 (183-220)||(25456310-25456347)
chr5 (183-252)||(25456540-25456609)
chr5 (25-97)||(35461435-35461508)
chr5 (29-81)||(13170001-13170053)
chr5 (184-236)||(33491531-33491583)
[»] scaffold0018 (7 HSPs)
scaffold0018 (178-254)||(161605-161682)
scaffold0018 (23-254)||(161464-161685)
scaffold0018 (183-254)||(161670-161742)
scaffold0018 (25-97)||(161403-161476)
scaffold0018 (183-254)||(161404-161476)
scaffold0018 (24-97)||(161670-161744)
scaffold0018 (23-99)||(161461-161538)
[»] scaffold0157 (6 HSPs)
scaffold0157 (134-221)||(21678-21763)
scaffold0157 (158-254)||(21580-21675)
scaffold0157 (24-97)||(21518-21592)
scaffold0157 (184-250)||(21786-21854)
scaffold0157 (183-254)||(21520-21592)
scaffold0157 (23-101)||(21721-21800)
[»] scaffold0128 (2 HSPs)
scaffold0128 (74-221)||(2490-2635)
scaffold0128 (27-110)||(2584-2667)
[»] scaffold0279 (4 HSPs)
scaffold0279 (178-251)||(1135-1209)
scaffold0279 (183-254)||(1200-1272)
scaffold0279 (24-97)||(1200-1274)
scaffold0279 (23-110)||(1127-1215)
[»] scaffold0002 (5 HSPs)
scaffold0002 (27-108)||(12110-12191)
scaffold0002 (158-253)||(12110-12203)
scaffold0002 (30-137)||(12212-12318)
scaffold0002 (29-85)||(12322-12377)
scaffold0002 (183-251)||(12310-12377)
[»] scaffold0578 (2 HSPs)
scaffold0578 (182-252)||(2445-2517)
scaffold0578 (28-98)||(2445-2517)


Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 364037 - 364282
Alignment:
Q  17 aaacagaagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaat 116  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  364037 aaacagaagtcctttaagtttaaggtttgtaacagattgatttttaagttgttttggtcacaaataagttctttaagtttgtaaacattttcaacttaat 364136  T
Q  117 cattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataac 216  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  364137 cattctattaaccaaacgttacaaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataac 364236  T
Q  217 ttaaagattaatctattacaaatatcaaatttaaaggaatttgatg 262  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  364237 ttaaagatcaatctattacaaatatcaaatttaaaggaatttgatg 364282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 24059722 - 24059874
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||| ||||| ||||||  ||||| || ||||| ||||| |||||| ||||||||||||||||||||| ||  || || |||    
T  24059722 aagtcctttaagtttgaggtttataacagattgatcatttaaattattttggtcacacataagtcctttaagtttgtaaacgtttttaatctagtccttc 24059821  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaa 174  Q
    |||||||||||  |||| ||||||||||||||||| |||||||||||| ||||    
T  24059822 tattaaccaaaagttacaaaaatgatgatgtggcagaaggactaaatcaaaaa 24059874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 35225684 - 35225491
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatta 126  Q
    ||||||||||| | ||||||| ||||||||  ||| |||| ||||  ||||| |||| | || ||||||||||||||| ||||| ||| || || | |||    
T  35225684 ctttaagtttgggatttgtaataaattgatcatttgagttatttttgtcacacataattcctataagtttgtaaacgtattcaatttagtccttttgtta 35225585  T
Q  127 accaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    || ||||||||| ||||||||||||||||| |||| |||||||||||  |  ||||||||||||||  |||||||||||| || ||||||||||||    
T  35225584 actaaacattacaaaaatgatgatgtggcagaaggcctaaatcgaaa--acgtttacaaacttaaagaacttatgtgtgatcagaataacttaaag 35225491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 21598726 - 21598505
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||| ||||||||||| |||| |  |||||||| ||||| ||||| |||||| |||||||||||||||||||||||| ||| || ||     
T  21598726 aagtcctttaagtttgtggtttgtaacatattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagtcctta 21598627  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||          ||||||||| | ||||||||||||||||  |  |||| ||||||||| |||||||||| || ||||||||||||||    
T  21598626 tgttaaccaaacat----------atgatgtggtagaaggactaaatcgaaa--acgtttataaacttaaaggacttatgtgggatcaaaataacttaaa 21598539  T
Q  222 -gattaatctattacaaatatcaaatttaaagga 254  Q
     ||  ||||| |||||||  ||||| ||||||||    
T  21598538 ggaccaatctgttacaaacctcaaacttaaagga 21598505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 17136901 - 17137011
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| |||||||||||||||||||||| ||| ||| |||||||| ||||| ||||| ||||||  ||||||||||||||||||||||| ||| || ||     
T  17136901 aagtcatttaagtttgaggtttgtaacagattaattctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttcaatttagtccttt 17137000  T
Q  122 tattaaccaaa 132  Q
    | |||||||||    
T  17137001 tgttaaccaaa 17137011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 17136980 - 17136907
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||| |||||    
T  17136980 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaa 17136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 9982950 - 9982730
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||   |||||||||| |||| |  |||||||| ||||  || || |||||| |||||||||||||||| ||||||| ||| || |||    
T  9982950 aagtcctttaagtttagagtttgtaacatattggtcctttaagttctttttgtctcacataagtcctttaagtttgtaaac-ttttcaatttagtccttc 9982852  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | |||||||||          | ||||||||| || ||||||||||| |||||  |||  |||||||||||||||||||||| ||||||||||||| |||    
T  9982851 tgttaaccaaa----------acgatgatgtgacagaaggactaaattgaaaacgttt--acaaacttaaaagacttatgtgcgaccaaaataactcaaa 9982764  T
Q  222 -gattaatctattacaaatatcaaatttaaagga 254  Q
     ||| ||||| |||||||  ||||| ||||||||    
T  9982763 ggatcaatctgttacaaaactcaaacttaaagga 9982730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 35225458 - 35225541
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||| |||||||||||| |||| |  |||||||| || |||||||| |||||||||||||||||||||||||||||    
T  35225458 tcctttaagtttaaggtttgtaacagattggtcctttaagttattctgatcacacataagttctttaagtttgtaaacgttttc 35225541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 21598502 - 21598588
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||||||||||||||||| |||| |  |||||||| |||||||| || |||||| |||||||||| |||||||||||    
T  21598502 aagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttgatcccacataagtcctttaagtttataaacgttttc 21598588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 17136916 - 17136844
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||| ||||||||||||||||| || ||||||||||||||  ||||||||||||||    
T  17136916 caaacttaaatgacttatgtgagaccaaaataacttaaaggactaatctattacaaacctcaaatttaaagga 17136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 17342721 - 17342621
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| ||||||||||||||||||||||  ||| |  |||||||| ||| | ||||| |||||| |||||||||||||||||||||||| ||| ||||||    
T  17342721 aagtcttttaagtttgaggtttgtaacatgttggtcctttaagttatttcggtcacacataagtcctttaagtttgtaaacgttttcaatttagtcattc 17342622  T
Q  122 t 122  Q
    |    
T  17342621 t 17342621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 2761680 - 2761495
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattcta 123  Q
    ||||||||| |||||  ||| ||| |||||| | ||||| ||| ||||||||||| |||| | |||||||||||||||||||||||| ||| || ||||     
T  2761680 gtcctttaaatttgaaatttataataaattggtcttttaggttattttgatcacacataaatcctttaagtttgtaaacgttttcaatttagtccttctg 2761581  T
Q  124 ttaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||          | || |||| |||| || ||||||||||| ||||  |  |||||||||||||| ||||||||||||| ||||||||||||||    
T  2761580 ttaacc----------agaacgatgttgtgtcagaaggactaaattgaaa--acgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaa 2761495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 35050704 - 35050596
Alignment:
Q  145 gatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatca 243  Q
    |||||||||||| |||||||||||||||||  ||| ||  ||||||||||| ||||||||||| ||||||||||||| || |||||| |||| ||  |||    
T  35050704 gatgatgtggcagaaggactaaatcgaaaacgtttata--aacttaaaagatttatgtgtgacaaaaataacttaaaggactaatctcttacgaacttca 35050607  T
Q  244 aatttaaagga 254  Q
    || ||||||||    
T  35050606 aacttaaagga 35050596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 10356542 - 10356432
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||| ||||||||| |||| | ||||||||| ||||   |||| |||||| |||||||||||||||  ||||||| |||||| ||     
T  10356542 aagtcctttaagtttgagatttgtaacagattggtcttttaagttatttttgccacacataagtcctttaagtttgtaaaacttttcaatttaatcctta 10356443  T
Q  122 tattaaccaaa 132  Q
    | |||||||||    
T  10356442 tgttaaccaaa 10356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 9982718 - 9982815
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||  ||| |||| ||||| || || ||||||  |||||||||||||||||||||||    
T  9982718 atcacacataagtcctttaagtttgagttttgtaacagattgatcctttgagttattttggtcgcacataagtcttttaagtttgtaaacgttttcaa 9982815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 2761494 - 2761546
Alignment:
Q  58 ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||    
T  2761494 ttttaagttattttgatcacacataagtcctttaagtttgtaaacgttttcaa 2761546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 9983008 - 9982936
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    ||||||||||||||||| |||||||||||||||  |||||||| ||||| ||||| |||||| ||||||||||    
T  9983008 gtcctttaagtttgaggattgtaacaaattgatcctttaagttattttggtcacacataagtcctttaagttt 9982936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 10356393 - 10356321
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||| |||||||||||||||||||||| |  ||||| |||||||||||||| ||||||||    
T  10356393 caaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaagga 10356321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 13273125 - 13273210
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||||||||||||||||| ||||| |||||||||  |||| ||||| || || ||||||| ||||||||||||||| |||||||    
T  13273125 aagttctttaagtttgaggtttataacagattgatttt--agttattttggtcccacataagttatttaagtttgtaaacattttcaa 13273210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 21598625 - 21598690
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| |||||  |||  ||||||||||| |||||||||||||||||||||||||||||    
T  21598625 cataaggactaaattgaaaacgttt--acaaacttaaaggacttatgtgtgaccaaaataacttaaag 21598690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 17342605 - 17342685
Alignment:
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| || || |||||||| |||||  |||  ||||||||||| ||||||||||||||| |||||||||||||    
T  17342605 aaaatgatgatgtgtcagaatgactaaattgaaaacgttt--acaaacttaaaggacttatgtgtgaccgaaataacttaaag 17342685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 10356462 - 10356539
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||| |||||||||||| | |||||||||| |||||  ||||| |||||||| ||||| ||||||||    
T  10356462 ttttacaaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaacttaaagga 10356539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 24059801 - 24059725
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||| ||||| ||| |||  ||||| ||||||||    
T  24059801 tttacaaacttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaacttaaagga 24059725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 35050802 - 35050731
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||| |||||||||||| |||| |  |||||||| ||| ||||||| ||||||||||||||||||    
T  35050802 cctttaagtttaaggtttgtaacagattggtcctttaagttatttcgatcacacataagttctttaagtttg 35050731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 9982936 - 9982974
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  9982936 aaacttaaaggacttatgtgtgaccaaaataacttaaag 9982974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 21598784 - 21598710
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgt 98  Q
    |||||||||||||||||||||||||| |||| |  |||||||| ||||| || || |||||| ||||||||||||    
T  21598784 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattttgttctcacataagtcctttaagtttgt 21598710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 9982673 - 9982742
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||| ||| ||  ||||| || ||||||||||| |||||| |||||||||||    
T  9982673 tttaagtttgaggtttgtaacatattcatcctttaaattattttgatcacacataagtcctttaagtttg 9982742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 10356260 - 10356333
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaatt-gatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||||||| |   ||||| || ||||| ||||| |||||| |||||||||||    
T  10356260 gtcctttaagtttgaggtttgtaacaaattagtcctttaaattattttggtcacacataagtcctttaagtttg 10356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 17342575 - 17342534
Alignment:
Q  180 ttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  17342575 ttacaaacttaaaggacttatgtgtgaccgaaataacttaaa 17342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 2761603 - 2761679
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataa-cttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||| || |||||||||| |||||||| || |||||  ||| ||||| |||| ||||||||||||||    
T  2761603 tttacaaacttaaaggatttatgtgtgatcaaaataacctaaaagaccaatttattataaatttcaaatttaaagga 2761679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 3895756 - 3895821
Alignment:
Q  188 ttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||||||  |||||||| ||| ||||||||||||||||  ||||| ||||||||    
T  3895756 ttaaaagacttatgtgtgacc--aataacttaaaaaattaatctattacaaacctcaaacttaaagga 3895821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 10356333 - 10356261
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||||||||||| ||||| || |||| | |||||||  ||||| ||||||||    
T  10356333 caaacttaaaggacttatgtgtgaccaaaataatttaaaggactaatttgttacaaacctcaaacttaaagga 10356261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24059666 - 24059737
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| ||||| |||||||||  ||||  | || |||||| |||||||||||    
T  24059666 gtcctttaagtttgaggtttgtaacatattga-ttttaagttactttggccccacataagtcctttaagtttg 24059737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 35225397 - 35225469
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    ||||||||||||||||||||||||||||||| |  |||||||| ||||| ||| | |||| | ||||||||||    
T  35225397 gtcctttaagtttgaggtttgtaacaaattggtcctttaagttattttggtcatacataaatcctttaagttt 35225469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 364121 - 364062
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||||||||||||  |||||| ||||||||||| |||||||| || ||||| |||||||    
T  364121 tttacaaacttaaagaacttatttgtgaccaaaacaacttaaaaatcaatctgttacaaa 364062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 364274 - 364199
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    |||||||| |||||  ||||||| | |||||| |||||||| ||||| ||||| ||||||  ||||||||||||||    
T  364274 tcctttaaatttgatatttgtaatagattgatctttaagttattttggtcacacataagtcttttaagtttgtaaa 364199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 10356318 - 10356393
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||  ||||||||| |||| || |||||||| ||||| |||||  ||||| |||||||||||    
T  10356318 aagtcctttaagtttgatatttgtaacagattggttctttaagttattttggtcacacttaagtcctttaagtttg 10356393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 17342706 - 17342745
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  17342706 caaacttaaaagacttatgtattaccaaaataacttaaag 17342745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 214
Target Start/End: Original strand, 19557904 - 19557935
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaata 214  Q
    ||||||||||||||||||||||||||||||||    
T  19557904 caaacttaaaagacttatgtgtgaccaaaata 19557935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 35050917 - 35050847
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||||||||||||||||||||| ||||||||  |||||||| ||| | ||||  |||||| ||||||||||    
T  35050917 cctttaagtttgaggtttgtaataaattgatcctttaagttatttaggtcacgcataagtcctttaagttt 35050847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 35050847 - 35050917
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagg 253  Q
    ||||||||| |||||||| |||||| |||||||||||| ||| ||| |||||||||  ||||| |||||||    
T  35050847 aaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaacctcaaacttaaagg 35050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 6140447 - 6140504
Alignment:
Q  195 acttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||||| ||||||||| | | |||||||||||||| ||||| |||||    
T  6140447 acttatgtgtgaccaaactaacttaaatggtcaatctattacaaatttcaaacttaaa 6140504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 13273342 - 13273258
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||| || ||||||||| |||| |  |||||||| ||||  ||||| ||||||||||||||||||| ||| |||||||    
T  13273342 tcctttaagttttag-tttgtaacagattggtcatttaagttatttttgtcacacataagttctttaagtttgtgaactttttcaa 13273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 21598710 - 21598783
Alignment:
Q  182 acaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||| |||||||||| || |||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  21598710 acaaacttaaaggacttatgtgagaacaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 21598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 10356527 - 10356599
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||| ||||||||||| |||| ||  ||||| |||||||  ||||| ||||||||    
T  10356527 caaacttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgttacaaacgtcaaacttaaagga 10356599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 13273140 - 13273068
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||  |||||||| |||||||||||| | ||| ||  ||||||||||||| |||||| ||||||||    
T  13273140 caaacttaaagaacttatgtatgaccaaaataattcaaaagaccaatctattacaaacatcaaacttaaagga 13273068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 6e-52; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 31630354 - 31630127
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    ||||||||||| ||||||||| |||| | |||| |||||||||| ||||| ||||| |||||| ||||||||||||||| |||||||| ||| ||||| |    
T  31630354 aagtcctttaaatttgaggttagtaatagattggtttttaagttattttggtcacacataagt-ctttaagtttgtaaatgttttcaatttagtcatttt 31630256  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa- 221  Q
     |||||||||  |||| |||| |||||||||||| ||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||     
T  31630255 gttaaccaaatgttacaaaaacgatgatgtggcagaaggactaaatcgaaa--acgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 31630158  T
Q  222 gattaatctattacaaatatcaaatttaaag 252  Q
    ||| ||||| |||||||  ||||| ||||||    
T  31630157 gatcaatctgttacaaacctcaaacttaaag 31630127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 25895196 - 25894965
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||||||||||||| |||||||||||| |||||   |||||||| ||||  ||||| |||||| |||| ||||||||||||||||||| ||| || ||     
T  25895196 aagtcctttaagtttaaggtttgtaacagattgaacctttaagttattttagtcacacataagtcctttcagtttgtaaacgttttcaatttagtccttt 25895097  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||||| |||| |||||||||| | ||||||||||||  ||| || |||||||||||||| ||||||| || |||||||||||||||||    
T  25895096 tgttaaccaaacattacaaaaacgatgatgtggtagaaggactaaatc--aaaaatgtttacaaacttaaaggacttatatgcgaccaaaataacttaaa 25894999  T
Q  222 -gattaatctattacaaatatcaaatttaaagga 254  Q
     ||  ||| | |||||||| ||||| ||||||||    
T  25894998 ggaccaatttgttacaaatctcaaacttaaagga 25894965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 3877026 - 3876818
Alignment:
Q  15 tcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaactt 113  Q
    ||||||| |||| |||||| |||||||||||||| |||||||| ||||||||| ||||| ||||| |||||| ||||| || ||||||| ||| ||| ||    
T  3877026 tcaaacataagttctttaaatttgaggtttgtaataaattgatcttttaagttattttggtcacacataagtcctttacgtatgtaaacctttccaattt 3876927  T
Q  114 aatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaat 213  Q
    | || |||||||||||||||||||| |||| ||||||| |||| || |||| ||| ||||  |  |||||||||||||| |||||||||||  | |||||    
T  3876926 agtccttctattaaccaaacattacaaaaacgatgatggggcagaatgacttaattgaaa--acgtttacaaacttaaatgacttatgtgtagcaaaaat 3876829  T
Q  214 aacttaaagat 224  Q
    ||| |||||||    
T  3876828 aacataaagat 3876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 5009216 - 5009417
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgattt-----ttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatc 117  Q
    ||||| |||||||||| ||||||||||| ||| ||||     ||||||| ||||||||||| ||||||  |||| ||||||||| |||||||| ||| ||    
T  5009216 aagtcatttaagtttgtggtttgtaacagattaatttgtcatttaagttattttgatcacacataagtcttttatgtttgtaaatgttttcaatttagtc 5009315  T
Q  118 attctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataact 217  Q
     |||| ||||||||||||||| |||| |||||||||||| ||| ||||||| ||||  |  |||||||||||||| || ||||||||||| |||||||||    
T  5009316 cttctcttaaccaaacattacaaaaacgatgatgtggcagaagaactaaattgaaa--acgtttacaaacttaaagga-ttatgtgtgacaaaaataact 5009412  T
Q  218 taaag 222  Q
    |||||    
T  5009413 taaag 5009417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 36694589 - 36694383
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatta 126  Q
    |||||| |||||||||||||||| |||| |  ||||| || ||||| ||||| |||||| |||||||||||||||   |||||| ||| || |||| |||    
T  36694589 ctttaattttgaggtttgtaacagattggtcctttaaattattttggtcacacataagtcctttaagtttgtaaaaaatttcaatttagtctttctgtta 36694490  T
Q  127 accaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaa-gacttatgtgtgaccaaaataacttaaagatt 225  Q
    ||||||          |||||||||||||| ||||||||||| |||||||  ||||||||||||||| ||||||| |||||||||||||||||||| | |    
T  36694489 accaaa----------atgatgatgtggcagaaggactaaattgaaaata--tttacaaacttaaaaggacttatatgtgaccaaaataacttaaa-act 36694403  T
Q  226 aatctattacaaatatcaaa 245  Q
    ||||| |||||||| |||||    
T  36694402 aatctgttacaaatttcaaa 36694383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 238
Target Start/End: Original strand, 12612448 - 12612664
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatta 126  Q
    |||||||||| |||||||||| | |||| | |||||| || ||||||||||| ||||||  |||||||||||||| |||||||| ||| || |||| |||    
T  12612448 ctttaagtttaaggtttgtaatagattggtcttttaaattattttgatcacacataagtcatttaagtttgtaaatgttttcaatttactc-ttctgtta 12612546  T
Q  127 accaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaac-------ttaaaagacttatgtgtgaccaaaataactta 219  Q
    |||||||||||| |||| |||||||| ||| || ||| |||||||||| || |||||||||       ||||||||||||||| ||| |||||||| |||    
T  12612547 accaaacattac-aaaacgatgatgttgcagaatgacaaaatcgaaaa-atgtttacaaacctaaaatttaaaagacttatgtatgagcaaaataattta 12612644  T
Q  220 aa-gattaatctattacaaa 238  Q
    || ||||||| | |||||||    
T  12612645 aatgattaatatgttacaaa 12612664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 4511587 - 4511482
Alignment:
Q  114 aatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaat 213  Q
    |||| ||||||||| |||||||||| |||| |||||||||||| ||||| ||||||||||  || |||||||||||||| ||||||||||| ||||||||    
T  4511587 aatccttctattaatcaaacattacaaaaacgatgatgtggcagaaggattaaatcgaaa--atgtttacaaacttaaatgacttatgtgtaaccaaaat 4511490  T
Q  214 aacttaaa 221  Q
    ||| ||||    
T  4511489 aacataaa 4511482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 29379856 - 29379973
Alignment:
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    ||||||||||||||||| |||||||||||| |||| || ||||||| ||||||  ||||||||||||||||||||| ||||| || |||| | |||||||    
T  29379856 aaaatgatgatgtggcagaaggactaaatcaaaaa-atgtttacaatcttaaagaacttatgtgtgaccaaaataatttaaaggactaatatgttacaaa 29379954  T
Q  239 tatcaaatttaaaggaatt 257  Q
      ||||| |||||||||||    
T  29379955 cgtcaaacttaaaggaatt 29379973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 44556582 - 44556692
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||| ||||||||  ||||| || ||||||||||| |||||| ||||||||||  | |||||||||| ||| |  |||    
T  44556582 aagtcctttaagtttgaggtttgtaataaattgatcctttaacttattttgatcacacataagtcctttaagtttacatacgttttcaatttagttcttc 44556681  T
Q  122 tattaaccaaa 132  Q
    |||||||||||    
T  44556682 tattaaccaaa 44556692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 1316092 - 1316184
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaat-tgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaactta 114  Q
    |||||||||| ||||||||||||||||| || || | |||||||| |||||||| || |||||| |||||||||||||||||||| |||||||    
T  1316092 aagtcctttatgtttgaggtttgtaacatatatgttctttaagttattttgatcgcacataagtcctttaagtttgtaaacgtttgcaactta 1316184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 14166463 - 14166359
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    |||||| ||||||||| |||||||||||||||||||||| | ||| ||||| ||||   |||||||||| ||||||||||||| ||| || |||||||||    
T  14166463 ctttaactttgaggttcgtaacaaattgatttttaagttatcttgttcacacataaaccctttaagtttttaaacgttttcaatttagtccttctattaa 14166364  T
Q  128 ccaaa 132  Q
     ||||    
T  14166363 gcaaa 14166359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 4188657 - 4188740
Alignment:
Q  60 ttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaa 143  Q
    ||||||| ||||| ||||| | |||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  4188657 ttaagttattttggtcacacacaagtcctttaagtttctaaacgttttcaatttattcattctattaaccaaacattacaaaaa 4188740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 36217281 - 36217208
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||  ||||||||||    
T  36217281 aagtcctttaagtttgaggtttgtaacaaattga-ttttaagttattttggtcacacataagtcttttaagtttg 36217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 11791842 - 11791745
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggca 156  Q
    |||||||| ||||| ||||| |||||| || ||||||||||||||||||||| ||| ||||| | |||||||||| |||| |||| |||||| |||||    
T  11791842 tttaagttattttggtcacacataagtcctataagtttgtaaacgttttcaatttagtcattttgttaaccaaacgttacaaaaacgatgatctggca 11791745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 31630127 - 31630208
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||| ||||| ||||||  |||||||||||||||||||||    
T  31630127 ctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttc 31630208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 31630277 - 31630351
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||| |||||||||||||||||||||||||||| |  |||||||||| ||  ||||||||||||||    
T  31630277 tttacaaacttaaa-gacttatgtgtgaccaaaataacttaaaaaccaatctattactaacctcaaatttaaagga 31630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 9500962 - 9501048
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||| ||||||||||||||||||||| || | || |||||||| ||||  ||||| |||||| ||||||||||||||||||||||    
T  9500962 aagtcccttaagtttgaggtttgtaacagatcgcttctttaagttattttagtcacacataagtcctttaagtttgtaaacgttttc 9501048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4189087 - 4188982
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    |||||||||||||||||||| | || | |  |||||||| ||||||||||| |||||| | |||||||| ||||||||||||| ||| ||||| | ||||    
T  4189087 tttaagtttgaggtttgtaatatataggtcctttaagttattttgatcacatataagtccattaagtttataaacgttttcaatttagtcattttgttaa 4188988  T
Q  128 ccaaac 133  Q
    ||||||    
T  4188987 ccaaac 4188982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 9501067 - 9500997
Alignment:
Q  151 gtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||| |||||||||||||||||  |||  ||||||||||| |||||||||||||| |||||||||||||||    
T  9501067 gtggcagaaggactaaatcgaaaacgttt--acaaacttaaaggacttatgtgtgactaaaataacttaaaga 9500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 1316107 - 1316035
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| |||| |||||||||||||||||||||||||||| |||  ||||||||||||  ||||||||||||||    
T  1316107 caaacataaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatttaaagga 1316035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 5009453 - 5009366
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||| ||||  ||||| |||| | ||||||||||||||||||||||||    
T  5009453 aagtactttaagtttgaggtttgtaacatattgatcctttaagttatttttgtcacacataa-tcctttaagtttgtaaacgttttcaa 5009366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 43699440 - 43699516
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| ||| | |||||||  ||||| ||||||||    
T  43699440 tttacaaacttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaagga 43699516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 25894964 - 25895047
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||||||||||||| |||||||||||||| |  |||||||| ||||| || || |||||| |||||||||||||||| ||||    
T  25894964 gtcctttaagtttgagatttgtaacaaattggtcctttaagttattttggtcgcatataagtcctttaagtttgtaaacatttt 25895047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 36217208 - 36217278
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| | |||||||  ||||| ||||||||    
T  36217208 caaacttaaaagacttatgtgtgaccaaaataacttaaa-atcaatttgttacaaacctcaaacttaaagga 36217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 3876939 - 3877013
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaag 252  Q
    |||||| || |||| ||||||||||||||||||||||||| |||||| ||| |||||||||  ||||||||||||    
T  3876939 tttacatacgtaaaggacttatgtgtgaccaaaataacttaaaagatcaatttattacaaacctcaaatttaaag 3877013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 4511940 - 4512018
Alignment:
Q  57 tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacat 135  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||| ||||||| ||  |||||||  |||| ||||||    
T  4511940 tttttaagttattttgatcacatataagtcctttaagtttgtaaacattttcaatttcgtcattctggtaacaaaacat 4512018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 43699517 - 43699435
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttt 106  Q
    |||||||||||||||||||||||||| ||||||  ||||| || ||||| ||||| ||||||  |||||||||||||| ||||    
T  43699517 gtcctttaagtttgaggtttgtaacatattgatcctttaatttattttggtcacacataagtcttttaagtttgtaaatgttt 43699435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 5009510 - 5009438
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| |||| | ||||||||| ||||| ||||| |||||| |||||||||||    
T  5009510 gtcctttaagtttgaggtttgtaacatattggtcttttaagtttttttg-tcacacataagtactttaagtttg 5009438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 30265473 - 30265546
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaa 132  Q
    |||||||| ||||  ||||| |||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  30265473 tttaagttctttttgtcacacataagtgctttaagtttgtaaacgttttcaatttagtcattctgttaaacaaa 30265546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 36694513 - 36694558
Alignment:
Q  177 tttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  36694513 tttttacaaacttaaaggacttatgtgtgaccaaaataatttaaag 36694558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 5009318 - 5009257
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| ||||| ||||  |||||| |||||||||||||||||| ||||||||||||||    
T  5009318 aaggactaaattgaaaacattt--acaaacataaaagacttatgtgtgatcaaaataacttaaa 5009257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 222
Target Start/End: Original strand, 33847597 - 33847678
Alignment:
Q  139 taaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||| ||||||||| |||||||||||||| ||||  || |||| ||||||||| ||||||| || ||||||||||| ||||||    
T  33847597 taaaacgatgatgtgccataaggactaaattgaaa--atgtttaaaaacttaaaggacttatatgcgaccaaaataatttaaag 33847678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 3876785 - 3876872
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||| ||||||| ||||||| |||||| |||| ||| ||||    ||| ||||||  |||||||||||||||||||||||    
T  3876785 aagtcctttaagattgaggtctgtaacatattgatctttatgttatttttgctacacataagtcatttaagtttgtaaacgttttcaa 3876872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 6694164 - 6694122
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  6694164 tttacaaacttaaaagatttatgtgtgatcaaaataacttaaa 6694122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 11791800 - 11791842
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||| | ||||||||||||||||||||||||||||    
T  11791800 tttacaaacttataggacttatgtgtgaccaaaataacttaaa 11791842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 36217155 - 36217217
Alignment:
Q  189 taaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||| |||||||||||||||||||||| |||||||| ||||| |||||||  ||||| |||||    
T  36217155 taaatgacttatgtgtgaccaaaataatttaaagatcaatctgttacaaacctcaaacttaaa 36217217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 36217223 - 36217161
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagt 85  Q
    ||||| |||||||||||||||||||||| |||||| ||||| || ||||| ||||| ||||||    
T  36217223 aagtcttttaagtttgaggtttgtaacagattgatctttaaattattttggtcacacataagt 36217161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 5009232 - 5009160
Alignment:
Q  182 acaaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||| ||||||||||||| ||||||||||||||  ||  |||||||||||||  ||||| ||||||    
T  5009232 acaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 5009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 25895255 - 25895182
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| ||||| ||||| | |||| ||||||||||    
T  25895255 agtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacaaaagtcctttaagttt 25895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 1316171 - 1316127
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||| |||||||||| || ||||||||||||||||    
T  1316171 tttacaaacttaaaggacttatgtgcgatcaaaataacttaaaga 1316127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 8035471 - 8035527
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattac 235  Q
    ||||||||||||||| |||||||| | |||||||||||||||| | |||| ||||||    
T  8035471 tttacaaacttaaaaaacttatgtataaccaaaataacttaaaaactaatatattac 8035527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 12612522 - 12612462
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaa 238  Q
    |||||||||||||| ||||||||||||| |||||||| || |||||  |||||||||||||    
T  12612522 tttacaaacttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaa 12612462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 25895117 - 25895177
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagatt-aatctattacaaa 238  Q
    |||||||||| ||| |||||||||||||| |||||||||||||| || ||||| |||||||    
T  25895117 tttacaaactgaaaggacttatgtgtgactaaaataacttaaaggttcaatctgttacaaa 25895177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 33847698 - 33847770
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||||| |||||||||||||||||||||||||||| ||  ||| | ||||||| |||||| ||||||||    
T  33847698 caaatttaaaggacttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaagga 33847770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 8035515 - 8035440
Alignment:
Q  57 tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaa 132  Q
    |||||||||| ||||| | | | ||||||| |||||||||||||||||||| || ||| ||||| | |||||||||    
T  8035515 tttttaagttattttggttatacataagttttttaagtttgtaaacgtttttaatttagtcattatgttaaccaaa 8035440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 14166022 - 14166073
Alignment:
Q  87 ctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattac 138  Q
    ||||||||||||||| |||||||| ||| ||||| |||||||||||| ||||    
T  14166022 ctttaagtttgtaaatgttttcaatttagtcattttattaaccaaacgttac 14166073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 25895182 - 25895253
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||| |||||||||||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  25895182 aaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 25895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 44556656 - 44556585
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||||||||||| |||||||| ||||| ||| ||| |||||||||  ||||| ||||||||    
T  44556656 aaacttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaacttaaagga 44556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 4511984 - 4511942
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||    
T  4511984 tttacaaacttaaaggacttatatgtgatcaaaataacttaaa 4511942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 29379970 - 29379888
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||||||||||| |||||||||| |||  |  ||||| || ||||| ||||| |||||||||||||| |||||||| ||||    
T  29379970 tcctttaagtttgacgtttgtaacatattagtcctttaaattattttggtcacacataagttctttaagattgtaaacatttt 29379888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 4188698 - 4188657
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    |||| ||||||||| ||||| |||||||||||||||||||||    
T  4188698 tttagaaacttaaaggacttgtgtgtgaccaaaataacttaa 4188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 4512098 - 4512049
Alignment:
Q  58 ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||| || |||||||| || |||||| |||||||||||||||||||||    
T  4512098 ttttaaattattttgatcccatataagtcctttaagtttgtaaacgtttt 4512049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 5009160 - 5009232
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttgt 98  Q
    ||||||||||||||||||||| | |||| |  ||||||||| ||||| ||||| ||||||  |||||||||||    
T  5009160 ctttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtcatttaagtttgt 5009232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 14166460 - 14166521
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||||| ||||||||||||| ||   |||||||||||| |||||| |||||    
T  14166460 aaagacttatgtgtgacaaaaataacttaaaggacctatctattacaaacatcaaacttaaa 14166521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 33847771 - 33847698
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| |||||||||| |||| |  |||||||| ||||| ||||| |||||| |||||| ||||    
T  33847771 gtcctttaagtttgatgtttgtaacatattgttcctttaagttattttggtcacacataagtcctttaaatttg 33847698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 4511907 - 4511871
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataa 215  Q
    ||||||||||||||||||||||||||||  |||||||    
T  4511907 tttacaaacttaaaagacttatgtgtgattaaaataa 4511871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 30265515 - 30265459
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctatta 234  Q
    ||||||||||||||  ||||||||||||| |||| |||||||| || ||||||||||    
T  30265515 tttacaaacttaaagcacttatgtgtgacaaaaagaacttaaatgactaatctatta 30265459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 44556597 - 44556541
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||| |||||||||||||| |||| |||||||| ||  |||||||||||||    
T  44556597 caaacttaaaggacttatgtgtgacaaaaaaaacttaaatgaccaatctattacaaa 44556541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 40286527 - 40286331
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| |||| | |||| |||| ||||  |||||  |||||||||||||||||||||| ||||||| ||| |  |||    
T  40286527 aagtcctttaagtttgaggtttgtaacagattggtcttttgagttattttagtcaca--taagttctttaagtttgtaaacattttcaatttagttcttc 40286430  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||||||||| |||| ||||||||| || ||| |||||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||    
T  40286429 tattaaccaaacattacaaaaacgatgatgtgacagaagtactaaatcgaaaata--tttacaaacttaaaggacttctgtgtgaccaaaataacttaaa 40286332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 25848587 - 25848347
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||||||||| ||| |||||||||||| |||| |  |||||||| ||||| ||||| ||| || ||||||||||||||| |||||||| |    
T  25848587 atcacacataagtcctttaaattttaggtttgtaacacattggtcctttaagttattttggtcacacatatgtcctttaagtttgtaaatgttttcaatt 25848488  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || |||| ||||||||||||||| |||||||| |||||||| ||||||||||||| ||  |  ||||||||||||||||| || |||||||||||||    
T  25848487 tagtccttctgttaaccaaacattacaaaaatgattatgtggcagaaggactaaatcgcaa--acgtttacaaacttaaaagatttttgtgtgaccaaaa 25848390  T
Q  213 taacttaa-agattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||  || ||||||||||||||  ||||| ||||||||    
T  25848389 taacttaacggactaatctattacaaacctcaaacttaaagga 25848347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 32186753 - 32186556
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| ||||| | ||| |||| |||||||||||||||||||||||||| ||| || ||     
T  32186753 aagtcctttaagtttgaggtttgtaacatattgatgttttaagttattttggttacacataaattctttaagtttgtaaacgttttcaatttagtctttt 32186654  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | |||||||||| | || ||||||||||||||| | ||||||||||||||||  |  |||| ||||||||| ||||||||||| || |||||||||||||    
T  32186653 tgttaaccaaacgtaacaaaaatgatgatgtggtagaaggactaaatcgaaa--acgtttaaaaacttaaaggacttatgtgttacaaaaataacttaaa 32186556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 47891409 - 47891202
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||||||| ||||||||||||| |||| |||| |  |||||||| ||||| ||||| ||||||  ||||||||||||||||||||||| |    
T  47891409 atcacacataagtcctttgagtttgaggtttgcaacatattggtcctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttcaatt 47891310  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || || | |||||||||| |||| |||| ||||||||| || || |||||||||||||| |  ||||||||||||||||||| || || ||||||||    
T  47891309 tagtccttatgttaaccaaacgttacaaaaacgatgatgtgacaaaatgactaaatcgaaaaca--tttacaaacttaaaagactaatatgcgaccaaaa 47891212  T
Q  213 taacttaaag 222  Q
    ||||||||||    
T  47891211 taacttaaag 47891202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 43650239 - 43650078
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaag-tttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcat 157  Q
    |||||||| ||||| | ||| |||||| ||||||| ||||||||  ||||||||||| || |||| ||||| ||||||||| |||| ||||||||||||     
T  43650239 tttaagttattttggtaacacataagtcctttaagatttgtaaatcttttcaacttagtccttctgttaacaaaacattacaaaaacgatgatgtggcag 43650140  T
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    || |||||||||||||  || ||||||||||||||||| |||||||||| ||||||||||||||    
T  43650139 aaagactaaatcgaaa--atgtttacaaacttaaaagatttatgtgtgatcaaaataacttaaa 43650078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 27768400 - 27768560
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcata 158  Q
    |||| ||| ||||||||||| |||| | ||||||||||||||||||||| || ||| ||| ||| |||||||||| |||| ||||||||||||||  | |    
T  27768400 tttatgttattttgatcacacataaatcctttaagtttgtaaacgttttaaatttagtcaatctgttaaccaaacgttacaaaaatgatgatgtgagaga 27768499  T
Q  159 aggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
       || |||||||||  || |||||||||||||| ||||| ||| ||| ||||||||||||||    
T  27768500 caaaccaaatcgaaa--atgtttacaaacttaaatgacttttgtatgatcaaaataacttaaa 27768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 40209738 - 40209918
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    ||||| |||||||||| ||| | |||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||||| ||| | ||||| ||||    
T  40209738 tttaaatttgaggtttctaatagattgatcttttaagttgttttgttcacacataagt-ctttaagtttgtaaacgttttcaatttagttattctgttaa 40209836  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||          |||| ||| |||||||| || |||||||| ||||  | |||| |||||||||| ||||||||||||||||||||| ||||||    
T  40209837 cc----------aaaacgattatgtggcagaatgactaaattgaaa--acttttgcaaacttaaacgacttatgtgtgaccaaaatatcttaaa 40209918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 36900152 - 36900033
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattcta 123  Q
    ||||||||||||| |||||||||| | ||||||  |||||||| |||| ||| || |||| | |||||||||||||||| ||||||| ||| |||||||     
T  36900152 gtcctttaagtttaaggtttgtaagagattgatcgtttaagttattttaatctcacataaatcctttaagtttgtaaacattttcaatttagtcattctg 36900053  T
Q  124 ttaaccaaacattactaaaa 143  Q
    ||||||||||||||| ||||    
T  36900052 ttaaccaaacattacaaaaa 36900033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 14624104 - 14624321
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||| ||||| ||| |   |||||||| ||||| ||||| ||||||  ||||||| ||||||  ||||||| ||| || |||    
T  14624104 aagtcctttaagtttgaggtttataacagattaaacatttaagtt-ttttggtcacacataagtcatttaagtctgtaaatattttcaatttagtccttc 14624202  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||          | ||||||||| || ||| | ||||| |||||  |||  |||||||||||||||||||||||||||| |||||||||||    
T  14624203 tattaaccaaa----------acgatgatgtgacagaagaattaaattgaaaacgttt--acaaacttaaaagacttatgtgtgaccagaataacttaaa 14624290  T
Q  222 gattaatctattacaaatatcaaatttaaag 252  Q
       |||||||||||||| || ||| ||||||    
T  14624291 atctaatctattacaaacattaaacttaaag 14624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 28813894 - 28814025
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||| ||||||||||||| ||||||| ||||||||  |||||||| ||||| ||||| |||||| ||| |||||||||||||||||||| ||| |  ||     
T  28813894 aagttctttaagtttgagatttgtaataaattgatcatttaagttattttggtcacacataagtccttcaagtttgtaaacgttttcaatttagtattta 28813993  T
Q  122 tattaaccaaacattactaaaatgatgatgtg 153  Q
    | |||||||||| |||| |||| |||| ||||    
T  28813994 tgttaaccaaacgttacaaaaacgatggtgtg 28814025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 251
Target Start/End: Original strand, 36374861 - 36375075
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||||||||||||||||||||| ||||||||  |  ||||| |  ||||| |||||||||| | |||||| |||||||| |||||| | ||| ||||| |    
T  36374861 agtcctttaagtttgaggtttgcaacaaattagtcctttaaataattttggtcacaaataaatcctttaaatttgtaaaagttttcgatttagtcatttt 36374960  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||           |||||||||| | || ||| ||||||||||  |||  |||||||||||| |||||| |||||||||||||| ||||||    
T  36374961 attaaccaaac-----------gatgatgtggtagaacgaccaaatcgaaaacgttt--acaaacttaaaa-acttatttgtgaccaaaataatttaaag 36375046  T
Q  223 attaatctattacaaatatcaaatttaaa 251  Q
     | ||||||||| |||| ||||| |||||    
T  36375047 gtcaatctattataaatctcaaacttaaa 36375075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 252103 - 252189
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||||||||||||| |||||||||||| ||   | ||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  252103 aagtcctttaagtttaaggtttgtaacagatcagtcttttaagttattttggtcacaaataagtcctttaagtttgtaaacgttttc 252189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 7607765 - 7607680
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||| ||||| ||||  ||||||  ||||||||| |||||||||||    
T  7607765 aagtcatttaagtttgatgtttgtaacatattgatttttaagttattttggtcacgcataagtcttttaagtttctaaacgttttc 7607680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 47069807 - 47069620
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattcta 123  Q
    |||||||||||||||||||||||||| |||| |  |||||||   |||  ||||| |||||| |||||||||||||||||||||||| ||| ||||| |     
T  47069807 gtcctttaagtttgaggtttgtaacagattggtcatttaagtgaatttcgtcacatataagtcctttaagtttgtaaacgttttcaatttagtcattatg 47069708  T
Q  124 ttaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||          |||| |||||||||| | ||| ||||||| ||||  |  ||||| |||| ||| |||||||||||||||||||||||| |||||    
T  47069707 ttaacc----------aaaacgatgatgtggtagaagaactaaattgaaa--acgtttacgaactcaaaggacttatgtgtgaccaaaataactaaaaga 47069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 47573743 - 47573969
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||| |||||||||||||||||||||| ||||||  ||||| || |||||  | |  ||||||  ||||||||||||||   |||||| |    
T  47573743 atcacacataagtcttttaagtttgaggtttgtaacatattgatcctttaaattattttggccgctcataagtcatttaagtttgtaaaaaatttcaatt 47573842  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || ||||||||||||||          |||||||||||||| ||||| ||||| |||||  |||  || |||||||| ||||||| |||||||||||    
T  47573843 tagtccttctattaaccaaa----------atgatgatgtggcagaaggattaaattgaaaacgttt--acgaacttaaa-gacttatatgtgaccaaaa 47573929  T
Q  213 taacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||| ||| |||||||||||||  ||||| |||||    
T  47573930 taacttaaaggatcaatctattacaaacctcaaacttaaa 47573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 14964996 - 14964923
Alignment:
Q  146 atgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| ||||||||||| |||||  |||  ||||||||||| ||||||||||||||||||||||||||||    
T  14964996 atgatgtggcagaaggactaaattgaaaaccttt--acaaacttaaaggacttatgtgtgaccaaaataacttaaa 14964923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 36667239 - 36667324
Alignment:
Q  135 ttactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||| |||| |||||||||| | || |||||||||||   ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  36667239 ttacaaaaacgatgatgtgggagaatgactaaatcgac--tacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 36667324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 47573975 - 47573876
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| |||||||||||||||||||| | ||||||  |||||||| ||||| ||||| |||||| ||||||||| |||||||||||||| |||||| |||    
T  47573975 aagtcttttaagtttgaggtttgtaatagattgatcctttaagttattttggtcacatataagt-ctttaagttcgtaaacgttttcaatttaatccttc 47573877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 47891299 - 47891364
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| |||||  |||  |||||||||||||||||||||||||||||||||||||||||    
T  47891299 cataaggactaaattgaaaacgttt--acaaacttaaaagacttatgtgtgaccaaaataacttaaag 47891364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 28813973 - 28813899
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||| ||| |||||||||| ||||| ||||||    
T  28813973 tttacaaacttgaaggacttatgtgtgaccaaaataacttaaatgatcaatttattacaaatctcaaacttaaag 28813899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 47069527 - 47069600
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||| |||||||||||||||| |||| |  |||||||| ||||||||||| ||||||||||||||||||    
T  47069527 gtcctttaaatttgaggtttgtaacatattggtcctttaagttattttgatcacacataagttctttaagtttg 47069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 47069576 - 47069673
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||| |||| ||||||||||||| |||||||||||||| || ||| |||| ||||| ||||| |||||| |||| |||| ||||||||||||||    
T  47069576 atcacacataagttctttaagtttgagttttgtaacaaattggttcttttagttattttggtcacacataagtcctttgagttcgtaaacgttttcaa 47069673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 7607687 - 7607759
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||| |||||||||||||||||| ||||||||||||||||||| || ||| | ||||||| |||||| |||||    
T  7607687 tttagaaacttaaaagacttatgcgtgaccaaaataacttaaaaatcaatatgttacaaacatcaaacttaaa 7607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 14964887 - 14964974
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||| ||||||||| |||| |  |||||||| ||||| ||||| |||||| ||||||||||||||| ||||||||    
T  14964887 aagtcctttaagtttgag-tttgtaacagattggtcatttaagttattttggtcacacataagtcctttaagtttgtaaaggttttcaa 14964974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 25848359 - 25848287
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||| |||||||||||||||||||||| ||| ||| |||||||||| ||||| ||||||||    
T  25848359 caaacttaaaggacttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaagga 25848287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 254
Target Start/End: Complemental strand, 26724175 - 26724070
Alignment:
Q  148 gatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaat 246  Q
    ||||||||| || |||||||| |||||   ||||| ||||||||| ||||||| |||||||||||||||||||| || |||||| |||||||| | |||     
T  26724175 gatgtggcagaatgactaaattgaaaac--ttttataaacttaaaggacttatatgtgaccaaaataacttaaatgactaatcttttacaaatcttaaac 26724078  T
Q  247 ttaaagga 254  Q
    ||||||||    
T  26724077 ttaaagga 26724070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 46337651 - 46337562
Alignment:
Q  164 taaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||  ||||||||||||||| || |||| ||||||||||||||||||||| |||||| | |||||||  ||||| ||||||||    
T  46337651 taaatcgaaaat--ttttacaaacttaaaggatttatctgtgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaagga 46337562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 50332698 - 50332770
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||| ||||||||||||| |||||| ||| ||||||||| |||||| ||||||||    
T  50332698 caaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatttattacaaacatcaaacttaaagga 50332770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 26976497 - 26976540
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  26976497 tttacaaacttaaatgacttatgtgtgaccaaaataacttaaag 26976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 30955011 - 30955066
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  30955011 caaacataaaggacttatgtgtgaccaaaataacttaaacactaatctattacaaa 30955066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 30970823 - 30970878
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||| |||| |||||||||||||||||||||||||||| | ||||||||||||||    
T  30970823 caaacataaaggacttatgtgtgaccaaaataacttaaacactaatctattacaaa 30970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 46337559 - 46337638
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    ||||||||||||||||| |||||||||| ||| ||| |||||||| ||||| ||||| |||| | |||||||||||||||    
T  46337559 aagtcctttaagtttgaagtttgtaacatattaattctttaagttattttggtcacagataaatcctttaagtttgtaaa 46337638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 5442515 - 5442665
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaag-tttgtaaacgttttcaacttaatcattcta 123  Q
    |||||||||||||||||||||||   |||  |  |||||||| ||||| ||||| ||||||  |||||  |||||||| |||||||| ||| |  || |     
T  5442515 tcctttaagtttgaggtttgtaaatgattcgtcctttaagttattttggtcacagataagtcttttaaaatttgtaaatgttttcaatttagttcttatg 5442614  T
Q  124 ttaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaa 174  Q
    |||||| |||||||| |||| ||||||||| || |||||||||||||||||    
T  5442615 ttaacccaacattacaaaaacgatgatgtgacagaaggactaaatcgaaaa 5442665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 25848638 - 25848568
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaa 92  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||| ||||||    
T  25848638 aagtccttaaagtttgaggtttgtaataaattgatcttttaagttattttaatcacacataagtcctttaa 25848568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 28813843 - 28813909
Alignment:
Q  31 taagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||| | |||||| |||||||| ||| | ||||| ||||||||||||||||||    
T  28813843 taagtttgaggtttgtaatagattgatctttaagttatttaggtcacatataagttctttaagtttg 28813909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 39541415 - 39541506
Alignment:
Q  163 ctaaatcgaaaatatttttacaaacttaaaag-acttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||| ||| ||||  |||||||  ||||| ||||||||    
T  39541415 ctaaatcgaaaatattt--acaaacttaaaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaagga 39541506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 39714633 - 39714551
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||| ||||||||  ||||| || ||||||| ||| ||||||  ||| |||||||||||||||||||    
T  39714633 tttaagtttgaggtttgtaataaattgatcatttaaattattttgattacacataagtcatttgagtttgtaaacgttttcaa 39714551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 13903081 - 13902996
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||| |||||||||||||| |||  | ||||||||| ||||| | ||| |||||| |||||| |||||||||||||||||    
T  13903081 tcctttaagtctgaggtttgtaacatattagtcttttaagttattttggttacatataagtcctttaaatttgtaaacgttttcaa 13902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 25848480 - 25848542
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||| ||||| ||||  ||||||||||| ||| |||||||||||||||||||||||||    
T  25848480 aaggactaaattgaaaacattt--acaaacttaaaggacatatgtgtgaccaaaataacttaaag 25848542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 46337505 - 46337574
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||| ||||||| ||||| || ||||| ||||| |||||| |||||||||||    
T  46337505 tttaagtttgaggtttgtaacatattgattctttaaattattttggtcacacataagtcctttaagtttg 46337574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 47891458 - 47891385
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||  ||||||||||||||||  |||||||| ||||||||||| |||||| |||| ||||||    
T  47891458 gtcctttaagtttgaaatttgtaacaaattgatcctttaagttattttgatcacacataagtcctttgagtttg 47891385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 50332771 - 50332698
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| |||||||| |||||||| ||||||||| ||||| | ||| |||||| |||||||||||    
T  50332771 gtcctttaagtttgatgtttgtaataaattgatcttttaagttattttggttacacataagtcctttaagtttg 50332698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 252213 - 252140
Alignment:
Q  146 atgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||| | |||||| ||||||||||  |||  ||||||||||| ||||||| ||||||||||||||||||||    
T  252213 atgatgtggtagaaggaccaaatcgaaaacgttt--acaaacttaaaggacttatttgtgaccaaaataacttaaa 252140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 18020160 - 18020088
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||| ||| | |||||| ||||||||||    
T  18020160 gtcctttaagtttgaggtttgtaatagattgattatttaagttattttggtcaaacataagtcctttaagttt 18020088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 26724275 - 26724347
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||||| |||||||||||||| |||||||||||||| || |||||||||||||  ||||| ||||||||    
T  26724275 caaatttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctcaaacttaaagga 26724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 28814063 - 28814135
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||  |||||||| ||| |||||||||||||| || ||||||||||||||  ||||||||||||||    
T  28814063 caaacttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaacctcaaatttaaagga 28814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 40286286 - 40286374
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    |||| ||| |||||||||||||||||||||| ||||| |||| |  |||||||| ||||| ||||| | |||| |||||||||||||||    
T  40286286 atcacacataagtcctttaagtttgaggtttataacatattgttcctttaagttattttggtcacacagaagtcctttaagtttgtaaa 40286374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 18020001 - 18020065
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| |||||  |||   |||||||||||||||||||||| ||||||||||||||||    
T  18020001 cataaggactaaattgaaaaggtttg--caaacttaaaagacttatgtgtaaccaaaataacttaaa 18020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 18020088 - 18020159
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||||||| ||||||||||||||||||  || |||||||||||||  ||||| ||||||||    
T  18020088 aaacttaaaggacttatgtttgaccaaaataacttaaataatcaatctattacaaacctcaaacttaaagga 18020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 26976375 - 26976494
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatttt-taagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattcta 123  Q
    |||||||||||||||||||||||||| || | |  | |||||| ||||| | ||| | || |  ||||||||||||| ||||||||| |||  | |||||    
T  26976375 gtcctttaagtttgaggtttgtaacagataggtcctctaagttattttggttacacaaaaatcttttaagtttgtaatcgttttcaatttagaccttcta 26976474  T
Q  124 ttaaccaaacattactaaaa 143  Q
    ||||||||||||||| ||||    
T  26976475 ttaaccaaacattacaaaaa 26976494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 28813909 - 28813854
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||||||||  |||||| ||||||| ||||||||||||||| |||||||||||||    
T  28813909 caaacttaaagaacttatatgtgacctaaataacttaaagatcaatctattacaaa 28813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 36375075 - 36374997
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||| ||| ||| | |||||  ||||| || ||||| ||||||||||||| |||||||||||||||||||||    
T  36375075 tttaagtttgagatttataatagattgacctttaaattattttggtcacaaataagtt-tttaagtttgtaaacgttttc 36374997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 45131514 - 45131439
Alignment:
Q  180 ttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||||||| ||| || ||||||||||||| ||| ||||| |||||||  ||||| ||||||||    
T  45131514 ttacaaacttaaaagacttatatgttacaaaaataacttaaatgatcaatctgttacaaacctcaaacttaaagga 45131439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 50332527 - 50332578
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  50332527 tttaagttattttgatcacatataagtcatttaagtttgtaaacgttttcaa 50332578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 14624201 - 14624107
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||| ||||||||||  ||| ||||||| ||||||||||||||||||| |||||||| | ||||||| ||| |||  ||||| ||||||||    
T  14624201 aaggactaaattgaaaatattt--acagacttaaatgacttatgtgtgaccaaaa-aacttaaatgtttaatctgttataaacctcaaacttaaagga 14624107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18020110 - 18019992
Alignment:
Q  15 tcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaactt 113  Q
    ||||||| ||||||||||||||| |||||| ||||| |||| |  |||||||| ||||| | ||| ||||||  |||||||||| |||| ||||||| ||    
T  18020110 tcaaacataagtcctttaagtttaaggtttataacagattggtcgtttaagttattttggttacacataagtcttttaagtttgcaaaccttttcaattt 18020011  T
Q  114 aatcattctattaaccaaa 132  Q
    | || || | |||||||||    
T  18020010 agtccttatgttaaccaaa 18019992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 36375128 - 36375066
Alignment:
Q  35 tttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| |||| |||||||||| |||||||||   ||||||| ||||||||||    
T  36375128 tttgaggtttgtaacagattgttttttaagttattttgatcatgcataagttttttaagtttg 36375066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 36667360 - 36667278
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgt 104  Q
    ||||||||||||||| |||||||||||| |||  |  |||||||| ||||| ||||| ||||||  |||||||||||||||||    
T  36667360 aagtcctttaagtttaaggtttgtaacagatttgtcctttaagttattttggtcacacataagtcttttaagtttgtaaacgt 36667278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Complemental strand, 39541507 - 39541429
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttc-tttaagtttgtaaa 101  Q
    |||||||||||||||||||||||||  ||||||  |||||||| ||||| ||||| |||||| | ||||||||||||||    
T  39541507 gtcctttaagtttgaggtttgtaacggattgatcctttaagttattttggtcacatataagtccttttaagtttgtaaa 39541429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 51833481 - 51833335
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttt-taagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    ||||||||||| |||||||| | ||||||  | | |||| ||||| ||| | ||||||  |||||| ||||||| ||| |||| ||| |  |||| ||||    
T  51833481 tttaagtttgaagtttgtaatagattgatcatgttagttattttggtcatacataagtcatttaagattgtaaatgttatcaatttagttcttctgttaa 51833382  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaa 174  Q
    |||||| |||| |||||||||||||| || || || |||||||||||    
T  51833381 ccaaacgttacaaaaatgatgatgtgacagaaagattaaatcgaaaa 51833335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 26724348 - 26724275
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||  ||||| |||||| |||||| ||||    
T  26724348 gtcctttaagtttgaggtttgtaatagattgattctttaagttattttcgtcacacataagtcctttaaatttg 26724275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 27768442 - 27768377
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatca 243  Q
    |||||||||||||| || |||||||||| ||||||||| |||| ||||||||| ||||||| ||||    
T  27768442 tttacaaacttaaaggatttatgtgtgatcaaaataacataaatgattaatcttttacaaacatca 27768377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 28814136 - 28814063
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||| |||||||||||||| | |||  | ||||||||| ||||||||| | ||||||||||||||||||    
T  28814136 gtcctttaaatttgaggtttgtaatagattagtcttttaagttattttgatcagacataagttctttaagtttg 28814063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 40209810 - 40209738
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||||| ||||||||||||| ||||| ||||| |||||| ||||||||| |||  |||||||||||    
T  40209810 tttacaaacttaaa-gacttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaatttaaa 40209738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 42866021 - 42865968
Alignment:
Q  199 atgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||    
T  42866021 atgtgtgaccaaaataacataaatgattaatctgttacaaatatcaaatataaa 42865968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 14624321 - 14624233
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaat 116  Q
    |||||||||| | |||||||| | |||   ||||||||| || || ||||| ||||||  ||||||||||||||||||||||| |||||    
T  14624321 ctttaagtttaatgtttgtaatagattagattttaagttattctggtcacacataagtcttttaagtttgtaaacgttttcaatttaat 14624233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 25848287 - 25848359
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| ||||||| ||||||||  |||||||| ||||| ||||| | |||| |||||||||||    
T  25848287 tcctttaagtttgagatttgtaataaattgatcctttaagttattttggtcacacacaagtcctttaagtttg 25848359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 32186534 - 32186462
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||| |||||||||||||| |||||| ||  ||| |||||||||  ||||| ||||||||    
T  32186534 caaacttaaaagacttaggtgtgaccaaaatagcttaaaggaccaatatattacaaacctcaaacttaaagga 32186462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 45131438 - 45131514
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaa 100  Q
    |||||||||||||||||||||||||| ||||||  |||||||| ||||  | ||| ||||||  |||||||||||||    
T  45131438 gtcctttaagtttgaggtttgtaacagattgatcatttaagttatttttgtaacatataagtcttttaagtttgtaa 45131514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 45131556 - 45131600
Alignment:
Q  88 tttaagtttgtaaacgttttcaacttaatcattctattaaccaaa 132  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||    
T  45131556 tttaagtttgtaaatgttttcaacttagtcattctgttaaccaaa 45131600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 46337574 - 46337534
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  46337574 caaacttaaaggacttatgtgtgaccaaaataatttaaaga 46337534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 47891385 - 47891457
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||| ||| ||||||||||||| |||||||||||||| ||| ||| | |||||||| ||||| ||||||||    
T  47891385 caaactcaaaggacttatgtgtgatcaaaataacttaaaggatcaatttgttacaaatttcaaacttaaagga 47891457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 3169604 - 3169561
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||||| | ||| |||||||||||||||||||    
T  3169604 tttacaaacttaaaagacctgtgtatgaccaaaataacttaaag 3169561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 39714694 - 39714639
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataa 83  Q
    ||||||||||||||||| ||||| |||||| |||||||| ||||| ||||| ||||    
T  39714694 ctttaagtttgaggtttttaacagattgatgtttaagttattttggtcacacataa 39714639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 40210008 - 40209938
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| ||| ||||| |||||| ||||| || ||||| ||||| |||| |||||||||||||    
T  40210008 tcctttaagtttgagatttctaacatattgatctttaatttattttggtcacacataa-ttctttaagtttg 40209938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 40209945 - 40210008
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| ||||||||||||||||||| |||||||| ||| | ||| |||| ||||| ||||||||    
T  40209945 aaagaattatgtgtgaccaaaataaattaaagatcaatatgttagaaatctcaaacttaaagga 40210008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 43650044 - 43650127
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||||| |||||| | |||| |  |||||||| ||||||||||| |||| |  ||||||||||||||| |||||    
T  43650044 tcctttaagtttgaggattgtaagagattggtcatttaagttattttgatcacacataaatcttttaagtttgtaaacattttc 43650127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 43650196 - 43650271
Alignment:
Q  179 tttacaaa-cttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    |||||||| |||||| ||||||||||| |||||||||||||||| || | |||||||||| || ||||| ||||||    
T  43650196 tttacaaatcttaaaggacttatgtgttaccaaaataacttaaaggactcatctattacatatctcaaacttaaag 43650271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 50332569 - 50332526
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||    
T  50332569 tttacaaacttaaatgacttatatgtgatcaaaataacttaaag 50332526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 54343425 - 54343492
Alignment:
Q  146 atgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataac 216  Q
    |||| |||||| ||||||||| |||||||||| |  |||||||||||||| |||||||||| |||||||||    
T  54343425 atgaagtggcagaaggactaa-tcgaaaatatct--acaaacttaaaagatttatgtgtgatcaaaataac 54343492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 5442582 - 5442548
Alignment:
Q  188 ttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||||| |||||||||||||||||||||    
T  5442582 ttaaaagacttatctgtgaccaaaataacttaaag 5442548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 39714624 - 39714694
Alignment:
Q  183 caaacttaaaag-acttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||||| | ||||||||||||||||||||||||| || ||||| ||| |||  ||||| ||||||    
T  39714624 caaacttaaaaggatttatgtgtgaccaaaataacttaaacatcaatctgttaaaaacctcaaacttaaag 39714694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 47891166 - 47891252
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||| ||||||||||||||||||| || ||||||  |||||||| ||||| || || || |||  |||||||||||||| ||||||    
T  47891166 aagtcatttaagtttgaggtttgtaccagattgatcctttaagttattttggtcgcatattagtcttttaagtttgtaaatgttttc 47891252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 252117 - 252080
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  252117 aaacttaaaggacttacgtgtgaccaaaataacttaaa 252080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 13903072 - 13903145
Alignment:
Q  186 acttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaaggaattt 258  Q
    ||||||| || |||||||  |||||||||||||||| ||||||| | |||||||  |||||||||||| |||||    
T  13903072 acttaaaggatttatgtgcaaccaaaataacttaaaggattaatatgttacaaacctcaaatttaaagtaattt 13903145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 36667213 - 36667141
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaa-agattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||  ||||||| |||||||||||||||||||||||| ||| |||||| |||||||  ||||| |||||    
T  36667213 tttacaaatctaaaaga-ttatgtgtgaccaaaataacttaagagactaatctcttacaaacctcaaacttaaa 36667141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36900140 - 36900209
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||| ||| ||||||| |||||||||||||||| ||  ||||||||| |||| ||||| ||||||    
T  36900140 aaacttaaaggacctatgtgtaaccaaaataacttaaaggaccaatctattataaatctcaaacttaaag 36900209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 47891181 - 47891116
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatt 247  Q
    |||||||||| |||||| ||||||||||||||| || |||||| ||||| |||||||  |||||||    
T  47891181 caaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacctcaaatt 47891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 51833408 - 51833481
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataactta-aagattaatctattacaaatatcaaatttaaa 251  Q
    ||||||| |||||| ||||||||| |||||||||||||| | | ||| |||||||||||||  ||||| |||||    
T  51833408 tttacaatcttaaatgacttatgtatgaccaaaataactaacatgatcaatctattacaaacttcaaacttaaa 51833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 3169785 - 3169745
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||||||||| |||| |||||| |||||||||||||||    
T  3169785 caaacttaaaagatttatatgtgactaaaataacttaaaga 3169745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 26724290 - 26724199
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttcttt-aagtttgtaaacgttttcaactta 114  Q
    ||||||||||| |||||||| | ||||| ||| | ||||||||| ||||| ||| | | ||||||||| |||||| ||||||||||||| |||    
T  26724290 aagtcctttaaatttgaggtctctaacagatt-agttttaagttattttggtcatacacaagttcttttaagtttataaacgttttcaattta 26724199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 27657986 - 27658062
Alignment:
Q  30 ttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttt 106  Q
    ||||||||||||||||| ||| |||  |||||||||| |||   ||||| |||| |  |||||||||||||||||||    
T  27657986 ttaagtttgaggtttgtcacacattagtttttaagttatttcagtcacacataaatcatttaagtttgtaaacgttt 27658062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 41165868 - 41165908
Alignment:
Q  194 gacttatgtgtgaccaaaataacttaaagattaatctatta 234  Q
    ||||||||||||||||||||||| ||||||| ||| |||||    
T  41165868 gacttatgtgtgaccaaaataacataaagatcaatttatta 41165908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 45131569 - 45131525
Alignment:
Q  179 tttacaaacttaaaag-acttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||    
T  45131569 tttacaaacttaaaaggacttatgtgtgacaaaaataacataaag 45131525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 45131670 - 45131726
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||||||||||| | |||| ||||||||||||| || |||| |||||||||    
T  45131670 caaacttaaaagacttatatatgacaaaaataacttaaaggactaatatattacaaa 45131726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 47069600 - 47069528
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||  |||||||||||| |||||||||||||| ||  ||| | |||||||  ||||||||||||||    
T  47069600 caaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacctcaaatttaaagga 47069528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 47573767 - 47573695
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||||||||||  ||||||| ||||| || |||| | |||||||  ||||| ||||||||    
T  47573767 caaacttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaagga 47573695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 54343349 - 54343400
Alignment:
Q  58 ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||||||| ||||| ||||| |||||  ||||||||||||||||||||||||    
T  54343349 ttttaagttattttggtcacatataagc-ctttaagtttgtaaacgttttcaa 54343400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 35 - 254
Target Start/End: Complemental strand, 43258522 - 43258304
Alignment:
Q  35 tttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaaca 134  Q
    |||||| ||||||| | |||||||||||| || ||||||||||| |||||| |||||||||| |||||||||| || ||| ||||||| ||||| ||| |    
T  43258522 tttgagatttgtaatagattgatttttaaattattttgatcacacataagtcctttaagtttttaaacgtttttaatttagtcattctgttaacaaaata 43258423  T
Q  135 ttactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctatt 233  Q
    |||| |||| |||||||| ||| || |||||||||||||  || ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||    
T  43258422 ttacaaaaacgatgatgtcgcagaaagactaaatcgaaa--atgtttacaaacttaaaacacttatgtgtgacaaaaataacttaaatgatcaatctatt 43258325  T
Q  234 acaaatatcaaatttaaagga 254  Q
    |||||  |||| |||||||||    
T  43258324 acaaacttcaattttaaagga 43258304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 4048259 - 4048475
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||| |||||||| |||||||||||||| |||| |  |||||||| |  || ||||| |||| | ||| |||||||||||||||||||| ||| |||||     
T  4048259 aagttctttaagtctgaggtttgtaacatattggtcctttaagttataatggtcacatataaatccttgaagtttgtaaacgttttcaatttagtcattt 4048358  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||||| ||||||||||||||| | || |||||||||||||  || |||||||||||||| ||||||||||| ||||||||||||||||    
T  4048359 tgttaaccaaacattacaaaaatgatgatgtggtagaaagactaaatcgaaa--atgtttacaaacttaaaggacttatgtgtaaccaaaataacttaaa 4048456  T
Q  222 -gattaatctattacaaat 239  Q
     ||| ||||| ||||||||    
T  4048457 tgatcaatctgttacaaat 4048475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 3198268 - 3198448
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||| |||||||||||||||||||||||||||| | ||||||||| ||||| || || |||||||||| |||||||||||| ||||||| |||||||| |    
T  3198268 aagttctttaagtttgaggtttgtaacaaattggtcttttaagttattttggtcccacataagttcttaaagtttgtaaacattttcaatttaatcatcc 3198367  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgt 204  Q
    | ||||||||||||||| |||| |||||| ||||| || |||||||| ||||  |  ||||||||| |||| |||||||||||    
T  3198368 tgttaaccaaacattacaaaaacgatgatctggcagaaagactaaattgaaa--acgtttacaaacataaatgacttatgtgt 3198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 40951918 - 40951724
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct---at 124  Q
    |||||||||||||||||||| | ||||||  |||||||| ||||| ||||| |||| |  ||||||||||||||| ||||| | ||| ||||| |   ||    
T  40951918 tttaagtttgaggtttgtaatagattgatcatttaagttattttggtcacacataaatcatttaagtttgtaaacattttctatttagtcattatgtaat 40951819  T
Q  125 taaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| |||| ||||||||| || ||||||||||||||||     |||||||||||||| |||||||||| |||||||||||||||||    
T  40951818 taaccaaacattacaaaaacgatgatgtgacagaaggactaaatcgaaa--gcgtttacaaacttaaatgacttatgtgcgaccaaaataacttaaa 40951724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 27280671 - 27280816
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgattt-ttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| ||||||||||||||| |||| | ||| ||   ||||||| ||||| | |||  ||||| |||||||||||||||||||||| | ||| ||||||    
T  27280671 aagtcatttaagtttgaggttcgtaagagattaatcacttaagttattttggtaacacgtaagtcctttaagtttgtaaacgttttcgatttagtcattc 27280770  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaa 167  Q
      ||||||||||||||| |||| |||||||||||| ||||||||||    
T  27280771 agttaaccaaacattacaaaaacgatgatgtggcagaaggactaaa 27280816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 6694588 - 6694774
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||| ||||||||| | ||||||  |||||||| ||||| | ||| |||||| ||||||||||| |||||||||||| ||| || ||     
T  6694588 aagtcctttaagtttgtggtttgtaatagattgatcctttaagttattttgtt-acacataagtcctttaagtttgcaaacgttttcaatttagtcttta 6694686  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||          ||||| ||||| ||||| ||||||||||  |  |||| ||||||||| ||||||||||||||||||||||||||||    
T  6694687 tgttaaccaaacat----------atgatatggcagaagga-taaatcgaaa--acgtttataaacttaaaggacttatgtgtgaccaaaataacttaaa 6694773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 11975504 - 11975592
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||||||||||| ||||||  |||||||| || || ||||| |||||| |||||||||| |||||||||||||    
T  11975504 aagtcctttaagtttgaggtttgtaacatattgatcctttaagttattgtggtcacacataagtcctttaagtttttaaacgttttcaa 11975592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 44294052 - 44293966
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||| |||| ||||||||||||||||| ||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||    
T  44294052 aagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttc 44293966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 30869680 - 30869559
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||| ||||||||||||||||||||||| |||| |  |||||||| |||| |||||   ||||| |||||||||||||||| ||||||| ||| || ||     
T  30869680 aagttctttaagtttgaggtttgtaacagattggtcctttaagttatttttatcacgcgtaagtcctttaagtttgtaaacattttcaatttagtctttt 30869581  T
Q  122 tattaaccaaacattactaaaa 143  Q
    | ||||||||||||||| ||||    
T  30869580 tgttaaccaaacattacaaaaa 30869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 6694808 - 6694724
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||||||||||||||| |||| |  |||||||| ||||| ||||| |||||| |||||||||| |||||||||||    
T  6694808 gtcctttaagtttgaggtttgtaacatattggtcctttaagttattttggtcacacataagtcctttaagtttataaacgttttc 6694724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 42312932 - 42312819
Alignment:
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaat-aacttaaagattaatctattacaaa 238  Q
    ||||||||||||| | ||||||||||||| |||||   ||||||||| ||||| |||||||||||||| ||||| |||| || ||  |||||||||||||    
T  42312932 aaaatgatgatgtcgtataaggactaaattgaaaac--ttttacaaatttaaaggacttatgtgtgacaaaaataaactaaatgaccaatctattacaaa 42312835  T
Q  239 tatcaaatttaaagga 254  Q
    | ||||| ||||||||    
T  42312834 tctcaaacttaaagga 42312819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 40951823 - 40951918
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||| |||||||| |||||| |||  ||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||  ||||| |||||    
T  40951823 cataatgactaaatagaaaatgttt--acaaacttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 29019342 - 29019415
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaa 132  Q
    |||||||| ||||| ||||| |||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||    
T  29019342 tttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagtcattctgttaatcaaa 29019415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 6069338 - 6069262
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaat-tgatttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    ||||||||||||||||||||||||| || ||   |||||||| ||||||||| | ||||||||||||||||||||||    
T  6069338 tcctttaagtttgaggtttgtaacatatatgtcatttaagttattttgatcaaacataagttctttaagtttgtaaa 6069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 29710392 - 29710320
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||||||| |||||||  ||||| ||||||||    
T  29710392 caaacttaaaggacttatatgtgaccaaaataacttaaaggattaatctgttacaaacgtcaaacttaaagga 29710320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 29710499 - 29710564
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| |||||   ||||||||||||||| |||||||||||||| ||||||||||||||    
T  29710499 cataaggactaaattgaaaag--ttttacaaacttaaatgacttatgtgtgacgaaaataacttaaag 29710564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 41666201 - 41666285
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattga-tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttt 106  Q
    |||||||||||||||||||||||||||| ||||| ||||| || | ||||| | ||| ||||||  |||||||||||||||||||    
T  41666201 aagtcctttaagtttgaggtttgtaacatattgatttttttagctattttggttacacataagtagtttaagtttgtaaacgttt 41666285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 42312997 - 42313068
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| |||||||||||||||||||||||||| ||||| ||  ||| | |||||||||||||||||||||||    
T  42312997 aaactaaaaagacttatgtgtgaccaaaataatttaaaggaccaatttgttacaaatatcaaatttaaagga 42313068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 11975622 - 11975685
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaag-acttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  11975622 aaggactaaattgaaaatattt--acaaacttaaaaggacttatgtgtgacaaaaataacttaaag 11975685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 27576531 - 27576605
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||  |||||||||||||| |||||    
T  27576531 ttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaa 27576605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 29019384 - 29019342
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  29019384 tttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 29019342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 43258456 - 43258522
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaa 245  Q
    |||| ||||||||| ||||||||||||| |||||||| ||||| || |||||||||||||| |||||    
T  43258456 tttaaaaacttaaaggacttatgtgtgatcaaaataatttaaaaatcaatctattacaaatctcaaa 43258522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 27576596 - 27576668
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||||||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  27576596 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagga 27576668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 42312831 - 42312759
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||||||||||||||||| ||  ||| |||||||||  ||||| ||||||||    
T  42312831 caaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaagga 42312759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 44294037 - 44294109
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| ||||||||||||||||||||||||||| ||||| || |||| | |||||||  ||||||||||||||    
T  44294037 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagga 44294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 6694533 - 6694604
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgt 98  Q
    ||||||||||||||||||||| |||||| | ||||||||| ||||| || || |||||| ||||||||||||    
T  6694533 ctttaagtttgaggtttgtaataaattggtcttttaagttattttgttcccacataagtcctttaagtttgt 6694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 11975721 - 11975614
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttc-tttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||||||||||||||||||||||||||  |||| |  |||||||| ||||  ||||| |||||| | ||||||||||||||  ||||||| ||| || ||    
T  11975721 aagtcctttaagtttgaggtttgtaactgattggtcctttaagttatttttgtcacacataagtccttttaagtttgtaaatattttcaatttagtcctt 11975622  T
Q  121 ctattaac 128  Q
    ||||||||    
T  11975621 ctattaac 11975614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 4048271 - 4048205
Alignment:
Q  186 acttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaa 251  Q
    |||||||  |||||||||||||||||||||||||||| |||| |||||||||||  ||||| |||||    
T  4048271 acttaaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaacttaaa 4048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 252
Target Start/End: Complemental strand, 46713275 - 46713213
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||||| ||||||||||||||||||  | ||||||||||||||  ||||||||||||    
T  46713275 aaagacttatgtatgaccaaaataacttaaataactaatctattacaaacctcaaatttaaag 46713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 11975613 - 11975507
Alignment:
Q  147 tgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaa 245  Q
    ||||||| || ||||||||||| |||||  |||  | ||||||||| |||||||||||||||| ||||||||||| ||| ||| | |||||||  |||||    
T  11975613 tgatgtgacagaaggactaaattgaaaacgttt--aaaaacttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaa 11975516  T
Q  246 tttaaagga 254  Q
     ||||||||    
T  11975515 cttaaagga 11975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 27280947 - 27280874
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattga-tttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||||  ||||   |||||||| ||||| ||||| |||||| |||||||||||    
T  27280947 gtcctttaagtttgaggtttgtaacagcttgaccctttaagttattttggtcacacataagtactttaagtttg 27280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 29710319 - 29710392
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| |||||||||| ||| ||  |||||||| ||||| ||||| |||||| |||||||||||    
T  29710319 gtcctttaagtttgacgtttgtaacagattaatcctttaagttattttggtcacatataagtcctttaagtttg 29710392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 31453120 - 31453047
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaatt-gatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| ||| | | |||||||| ||||  ||||| |||||| |||||||||||    
T  31453120 gtcctttaagtttgaggtttgtaacagattagttatttaagttatttttgtcacacataagtcctttaagtttg 31453047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 42312758 - 42312831
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||| | |||| |  |||||||| ||||| ||||| |||||| |||||||||||    
T  42312758 gtcctttaagtttgaggtttgtaatatattggtcatttaagttattttggtcacacataagtcctttaagtttg 42312831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 44293943 - 44294033
Alignment:
Q  147 tgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||| | || ||||| ||||||||| |||  |||||||||||  |||||| |||||||||||||||||||| ||| ||||| |||||||    
T  44293943 tgatgtggtaaaatgactatatcgaaaatgttt--acaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaa 44294033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 11975519 - 11975451
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||| |||||||||||| | ||||||||||||| | |||| |||||||||  ||||| |||||    
T  11975519 caaacttaaaggacttatgtgtgtcaaaaataacttaaaaactaatttattacaaacctcaaacttaaa 11975451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 11975451 - 11975519
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||| |||||  |||||||||| ||||   |||| |||||| |||||||||||    
T  11975451 tttaagtttgaggtttgtaataaattagtttttaagttatttttgacacacataagtcctttaagtttg 11975519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 29710444 - 29710380
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||||||||||||||||||| ||  ||| | |||||||||||||| ||||||||    
T  29710444 aaagacttaagtgtgaccaaaataacttaaaggaccaatatgttacaaatatcaaacttaaagga 29710380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 31453047 - 31453119
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||| |||||||||||||  | |||||| |||||||  ||||| ||||||||    
T  31453047 caaacttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaagga 31453119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 27280874 - 27280913
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  27280874 caaacttaaagtacttatgtgtgaccaaaataacttaaag 27280913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 4048205 - 4048271
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagt 94  Q
    |||||||||||||||||||| | | | ||| |||||||| ||||| ||||| |||||||||||||||    
T  4048205 tttaagtttgaggtttgtaatagactaattctttaagttattttggtcacacataagttctttaagt 4048271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 22750388 - 22750350
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  22750388 caaaattaaatgacttatgtgtgaccaaaataacttaaa 22750350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 26185939 - 26185847
Alignment:
Q  119 ttctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataa 215  Q
    |||| ||||||||||||||  |||||||| ||||| || ||||||||||||   || | |||||| ||||||||||| ||||||||||  |||||||    
T  26185939 ttctgttaaccaaacattataaaaatgataatgtgacagaaggactaaatc---aaaacttttac-aacttaaaagatttatgtgtgattaaaataa 26185847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 27576670 - 27576596
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| |||||||||| |||| |  |||||||| ||||| ||||| ||||||  ||||||||||    
T  27576670 agtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 27576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 40951703 - 40951634
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||| |||||| ||||| |||||||||||||| ||| |||||| ||||||| ||||| ||||||    
T  40951703 caaacttaaaa-acttatttgtgagcaaaataacttaaatgatcaatctactacaaatctcaaacttaaag 40951634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 42313056 - 42313094
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  42313056 caaatttaaaggacttatgtgtgaccaaaataacttaaa 42313094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 44293780 - 44293845
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagt 94  Q
    ||||||||||||| ||||||||||||||   |  ||||||| ||||| ||||| |||||||||||||||    
T  44293780 tcctttaagtttgtggtttgtaacaaat---tagttaagttattttggtcacacataagttctttaagt 44293845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 44293927 - 44293864
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||||||| |||||| |||  |||||||||||  | |||| ||||||||||||||||||||||    
T  44293927 aaggactaaatagaaaatgttt--acaaacttaaagtatttatttgtgaccaaaataacttaaaga 44293864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 27280750 - 27280709
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    |||||||||||||| |||||| |||| |||||||||||||||    
T  27280750 tttacaaacttaaaggacttacgtgttaccaaaataacttaa 27280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 30869665 - 30869738
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaaggaa 255  Q
    ||||||||||  |||||||| |||||||||||||||||| ||  |||| ||||||||  ||||| |||||||||    
T  30869665 caaacttaaagaacttatgtatgaccaaaataacttaaaggaccaatcaattacaaacctcaaacttaaaggaa 30869738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 41666323 - 41666245
Alignment:
Q  134 attactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaata 214  Q
    ||||| |||| |||||||||||| ||||| ||||||| |||  |||  |||||||||||  |||||||||| |||||||||    
T  41666323 attacaaaaaagatgatgtggcaaaaggattaaatcgtaaacgttt--acaaacttaaactacttatgtgtaaccaaaata 41666245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 44293866 - 44293915
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||| ||||| |||||||||| | |||||||||||||||| |||||    
T  44293866 tttaagttattttggtcacaaataaatactttaagtttgtaaacattttc 44293915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 4048487 - 4048407
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||| |||| || ||||||||| ||||||  |||||||| ||||| | ||| |||||| |||||||||||||||| |||||    
T  4048487 tttaggtttaagatttgtaacagattgatcatttaagttattttggttacacataagtcctttaagtttgtaaacattttc 4048407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 6694662 - 6694607
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||| ||||||||||| | |||||||||||||| ||| |||||||||||||    
T  6694662 caaacttaaaggacttatgtgt-aacaaaataacttaaaggatcaatctattacaaa 6694607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 22026410 - 22026477
Alignment:
Q  88 tttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggca 156  Q
    |||||||||||||||||||| || ||| || || | |||||||||| |||| |||| ||||||||||||    
T  22026410 tttaagtttgtaaacgtttttaatttagtccttatgttaaccaaacgttac-aaaacgatgatgtggca 22026477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 27576611 - 27576523
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||| |||||||||||  ||||||||  |||| |  |||| ||| ||||| ||||| |||||| ||||||||||||||| ||||||||    
T  27576611 aagtcatttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaa 27576523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 29710585 - 29710657
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataa-cttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||| |||||||||| || |||||  ||||| |||||||  ||||| ||||||||    
T  29710585 caaacttaaatgacttatgtgttaccaaaataacctaaaagaccaatctgttacaaacgtcaaacttaaagga 29710657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 30662227 - 30662155
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||| | ||||||||||| ||||| |||||| |||| ||  | ||||||||||||    
T  30662227 caaacttaaaggacttatgtgtaatcaaaataacttaaaagactaatctgttacgaactttaaatttaaagga 30662155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 28 - 219
Target Start/End: Complemental strand, 18981274 - 18981086
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    ||||||||||||| ||||| ||| |||||| |||||||| |||| |||| | ||||||| |||||||||||||| |||||||| ||| ||||||||||||    
T  18981274 ctttaagtttgagatttgttacagattgatctttaagttattttaatcatatataagttatttaagtttgtaaatgttttcaa-ttagtcattctattaa 18981176  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataactta 219  Q
    ||||||||||| |||||||| |||||| | || ||| |||||||||  || |||||||||||||| ||||||||||||||||||||||||||    
T  18981175 ccaaacattacaaaaatgataatgtggtagaaagacgaaatcgaaa--atgtttacaaacttaaaggacttatgtgtgaccaaaataactta 18981086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 52913430 - 52913233
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||||||||||||| ||  |||||| |||||  || ||| |||| ||||||||||| |||||| |||||||||||||||||||||| | ||| || ||||    
T  52913430 agtcctttaagtttcagacttgtaataaattagttctttgagttattttgatcacacataagtcctttaagtttgtaaacgttttctatttagtccttct 52913331  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
     ||||||||||||||| |||| |||||||||||| || |||||||||||||  |  |||||||||||||| |||||||||||||| | ||||||||||||    
T  52913330 gttaaccaaacattacaaaaacgatgatgtggcagaatgactaaatcgaaa--acgtttacaaacttaaaggacttatgtgtgactagaataacttaaag 52913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 2633436 - 2633208
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||| ||||||||||||||||||||||| |||  || |||||||| ||||  ||||  |||||| |||||| ||||||||| |||| || ||| |||||     
T  2633436 aagttctttaagtttgaggtttgtaacatatttgttctttaagttatttttgtcacgcataagtcctttaaatttgtaaacatttttaatttagtcatta 2633337  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||||| |||| |||||||| | | || |||||||||||||  || |||||||||||||| || |||||||| ||||||||||||||||    
T  2633336 tgttaaccaaacattacaaaaacgatgatgtagtagaatgactaaatcgaaa--atgtttacaaacttaaatgatttatgtgtaaccaaaataacttaaa 2633239  T
Q  222 -gattaatctattacaaatatcaaatttaaa 251  Q
     ||  |||||||||||||| ||||| |||||    
T  2633238 tgaacaatctattacaaatctcaaacttaaa 2633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 251
Target Start/End: Complemental strand, 1173249 - 1173075
Alignment:
Q  74 tcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaa 173  Q
    ||||| |||||| |||| ||||||| ||||||||||| ||| || |||| |||| |||||||||| |||| |||||||||||| || |||||||||||||    
T  1173249 tcacacataagtcctttgagtttgtgaacgttttcaatttagtctttctgttaaacaaacattacaaaaacgatgatgtggcagaatgactaaatcgaaa 1173150  T
Q  174 atatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
      || ||||||||||| ||||||||||||||||||||||||||||||| | |||||| ||| |||  ||||| |||||    
T  1173149 --atgtttacaaactt-aaagacttatgtgtgaccaaaataacttaaaaactaatctgttataaacctcaaacttaaa 1173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 18608635 - 18608736
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||  ||||| ||||||||||||||| |||||||| ||| || |||    
T  18608635 aagtcctttaagtttgaggtttgtaacagattgattctttaagttattttggtcacacttaagtcctttaagtttgtaaatgttttcaatttagtccttc 18608734  T
Q  122 ta 123  Q
    ||    
T  18608735 ta 18608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 18608868 - 18608638
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||| |||| |||||| |||||||||| |||||| ||||||||| ||||||||| | |||||| |||||||||||||||||||||||| |    
T  18608868 atcacacataagtcgtttacgtttgatgtttgtaacagattgatattttaagttattttgatcatagataagtcctttaagtttgtaaacgttttcaatt 18608769  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || |  |||  ||||||||| | |          |  | ||| | ||||||||||| ||||| |  |||||||||||||| |||||| ||||||||||||    
T  18608768 tagttcttcggttaaccaaagact----------tattttggtagaaggactaaattgaaaaca--tttacaaacttaaaggacttaagtgtgaccaaaa 18608681  T
Q  213 taacttaaag-attaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| || ||||| |||||||  ||||| ||||||||    
T  18608680 taacttaaagaatcaatctgttacaaacctcaaacttaaagga 18608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 41007506 - 41007425
Alignment:
Q  69 tttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgat 150  Q
    |||| ||||| ||||||  ||||||||||||||||||||||| ||| ||||||| |||| |||||||||| |||||||||||    
T  41007506 tttggtcacatataagtcttttaagtttgtaaacgttttcaatttagtcattctgttaatcaaacattacaaaaatgatgat 41007425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 26879690 - 26879571
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||| ||||||||||| ||||| |||| ||||||  |||||||| ||||||||||| ||| || |||||| ||| ||||||||||||| |    
T  26879690 atcacacataagtcttttaagtttgaagtttgaaacagattgatcctttaagttattttgatcacatatatgtcctttaaatttttaaacgttttcaatt 26879591  T
Q  113 taatcattctattaaccaaa 132  Q
    || ||||| | |||||||||    
T  26879590 tagtcattatgttaaccaaa 26879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 33650455 - 33650645
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttg-taaacgttttcaacttaatcat 119  Q
    ||||| |||||||||| ||| ||||||| |||| |  ||||||||| ||||| |||||  ||||| ||||||||||| ||||||||| ||| ||| || |    
T  33650455 aagtcatttaagtttgtggtatgtaacatattggtccttttaagttattttggtcacacgtaagtcctttaagtttggtaaacgttt-caatttagtctt 33650553  T
Q  120 tctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaag-acttatgtgtgaccaaaataactt 218  Q
    | | ||||||||||||          ||||||||||| |||||||||||| ||||  |||  ||||||||||||| ||||||||| ||||||||||||||    
T  33650554 tatgttaaccaaacat----------atgatgtggcagaaggactaaatcaaaaacgttt--acaaacttaaaaggacttatgtgagaccaaaataactt 33650641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 1173075 - 1173167
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||||||||||||||| ||||| |||  |||||||||| ||||| ||||| ||||| ||||||||||||||||| ||||| | ||| |||||||    
T  1173075 tttaagtttgaggtttataacagattagtttttaagttattttggtcacacataag-tctttaagtttgtaaacattttcgatttagtcattct 1173167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 40892579 - 40892486
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaat 116  Q
    ||||||||||| |||||||||||||||| ||||   |||||||| ||| ||||||| ||||||  ||| ||||| ||||||||||||| |||||    
T  40892579 aagtcctttaaatttgaggtttgtaacagattggactttaagttatttcgatcacacataagtcatttgagtttttaaacgttttcaatttaat 40892486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 7490031 - 7489959
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| || ||||||||||||||||||||||||| ||||||||| |||||||  ||||| ||||||||    
T  7490031 caaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaagga 7489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 18204986 - 18204925
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttcttt 90  Q
    |||||||||||||||||||||| |||||||||||  || ||||| ||||| |||||||||||    
T  18204986 tttaagtttgaggtttgtaacatattgatttttagattattttggtcacacataagttcttt 18204925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 52913196 - 52913297
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaa-caaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||||||||||||||||||||||||| || |||| |  |||||||| || |  ||||| |||||| |||||||||||||||||||||| | ||| |||||    
T  52913196 aagtcctttaagtttgaggtttgtaaacagattggtcctttaagttattctagtcacacataagtcctttaagtttgtaaacgttttcgatttagtcatt 52913295  T
Q  121 ct 122  Q
    ||    
T  52913296 ct 52913297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 38699178 - 38699114
Alignment:
Q  87 ctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatg 151  Q
    |||||||||||||||||||||||| |||||| |||  |||||||||| |||| |||| |||||||    
T  38699178 ctttaagtttgtaaacgttttcaatttaatccttcggttaaccaaacgttacaaaaacgatgatg 38699114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 7489956 - 7490031
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||||| ||| ||  |||||||| ||||| ||||| |||| | |||||||||||    
T  7489956 aagtcctttaagtttgaggtttgtaacagattaatcatttaagttattttggtcacacataaatcctttaagtttg 7490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 52913211 - 52913172
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  52913211 caaacttaaaggacttatgtgtgaccaaaataacttaaag 52913172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 26879744 - 26879666
Alignment:
Q  20 cagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||| |||||||||||||||||||||||||| |||| |  |||||||| |||| |||||| ||||||  ||||||||||    
T  26879744 cagaggtcctttaagtttgaggtttgtaacagattggtcatttaagttatttttatcacacataagtcttttaagtttg 26879666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 6314353 - 6314437
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttc--tttaagtttgtaaacgttttcaa 110  Q
    |||||||||| | |||||||||| ||| || |||||||| |||| | |||| ||||||||  |||| ||||||||||||||||||    
T  6314353 ctttaagtttaaagtttgtaacagattaatgtttaagttattttaaacacatataagttctttttatgtttgtaaacgttttcaa 6314437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 34173316 - 34173393
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaa 100  Q
    |||||||||||||||| |||||||||| |||| |  |||||||| ||||| | |||||||||| |||||| |||||||    
T  34173316 agtcctttaagtttgatgtttgtaacagattggtcctttaagttattttggttacaaataagtcctttaaatttgtaa 34173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 38698916 - 38699036
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaac 128  Q
    ||||| |||||| |||||||||||||| ||   ||||| ||||| ||||| |  |||  ||||| ||||||||||||||||| ||| ||||  | |||||    
T  38698916 tttaactttgagatttgtaacaaattggtt---aagttattttggtcacacacgagtcttttaaatttgtaaacgttttcaatttagtcatgttgttaac 38699012  T
Q  129 caaacattactaaaatgatgatgt 152  Q
    |||| ||||| |||| ||||||||    
T  38699013 caaatattacaaaaacgatgatgt 38699036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 40892637 - 40892564
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||| |||||||||||||||||| ||||||  |||||||| ||||| ||||| |||||| |||||| ||||    
T  40892637 gtcctttgagtttgaggtttgtaacatattgatcatttaagttattttggtcacacataagtcctttaaatttg 40892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 26879666 - 26879738
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||||||||||  ||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  26879666 caaacttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaacttaaagga 26879738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 41007474 - 41007518
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||||||||||| |||||||||| ||| |||||||    
T  41007474 tttacaaacttaaaagacttatatgtgaccaaattaatttaaaga 41007518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 52913352 - 52913396
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||    
T  52913352 tttacaaacttaaaggacttatgtgtgatcaaaataactcaaaga 52913396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 34173412 - 34173318
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||     ||||||| ||||| ||||||| ||| |||||||||||||||| ||  ||||| ||||||| |||||| ||||||||    
T  34173412 aaggactaaatcgaaaa---cgttacaaatttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaagga 34173318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 40892501 - 40892576
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||||| ||| ||||||||||||| | |||||||||||||   ||||| |||||||  ||||||||||||||    
T  40892501 tttaaaaactcaaatgacttatgtgtgatcgaaataacttaaagtccaatctgttacaaacctcaaatttaaagga 40892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 33650531 - 33650493
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  33650531 caaacttaaaggacttacgtgtgaccaaaataacttaaa 33650493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 36956477 - 36956519
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||| |||||||||  |||||||||||||||||||||    
T  36956477 tttacaaactcaaaagacttgagtgtgaccaaaataacttaaa 36956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 40892564 - 40892602
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  40892564 caaatttaaaggacttatgtgtgaccaaaataacttaaa 40892602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 52913104 - 52913034
Alignment:
Q  183 caaacttaaaag-acttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||| | ||||||||||||||||||||||||| || |||||| |||||||  ||||| |||||    
T  52913104 caaacttaaaaggatttatgtgtgaccaaaataacttaaaggactaatctgttacaaacttcaaacttaaa 52913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 18608537 - 18608566
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaatt 54  Q
    ||||||||||||||||||||||||||||||    
T  18608537 gtcctttaagtttgaggtttgtaacaaatt 18608566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 18981052 - 18981133
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttt-taagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||| || ||| ||| ||||||||  | |||||| ||||| ||||| |||||| |||||||||||||||| |||||    
T  18981052 ctttaagtttaagttttataataaattgatcatataagttattttggtcacacataagtcctttaagtttgtaaacattttc 18981133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 18981201 - 18981274
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||||||  |||||| | |||  |||||||||||||||| ||||| | |||||| ||||| ||||||    
T  18981201 tttacaaacttaaataacttatatatgattaaaataacttaaagatcaatctgtaacaaatctcaaacttaaag 18981274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 36956431 - 36956361
Alignment:
Q  145 gatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataact 217  Q
    ||||||||| || |||| ||||||| |||| ||||  ||||||||| | | ||||||||||||||||||||||    
T  36956431 gatgatgtgacaaaagggctaaatcaaaaacattt--acaaacttatatggcttatgtgtgaccaaaataact 36956361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 38698985 - 38698944
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    |||||||| ||||||||||  |||||||||||||||||||||    
T  38698985 tttacaaatttaaaagactcgtgtgtgaccaaaataacttaa 38698944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 2633357 - 2633401
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||| ||||| |||||||| ||||| |||||||||||||||    
T  2633357 tttacaaatttaaaggacttatgcgtgacaaaaataacttaaaga 2633401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 26879516 - 26879552
Alignment:
Q  81 taagttctttaagtttgtaaacgttttcaacttaatc 117  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  26879516 taagttccttaagtttgtaaacgttttcaatttaatc 26879552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 33650471 - 33650431
Alignment:
Q  182 acaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||| |||||||||| || |||||||||||||||    
T  33650471 acaaacttaaatgacttatgtgggaacaaaataacttaaag 33650431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 9e-45; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 36053127 - 36052929
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| ||||| |||||||||||||| | ||||||  |||||||| ||||  ||||| |||||||||||||||||||||| ||||||||  || ||||||    
T  36053127 aagtcatttaaatttgaggtttgtaaaatattgatcctttaagttattttagtcacacataagttctttaagtttgtaaaagttttcaatctagtcattc 36053028  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||||||||||| |||||||||||||| || |||||||||||| |||| || ||||||||||||||  ||||| |||||||||||||||| ||||    
T  36053027 tgttaaccaaacattacaaaaatgatgatgtgacagaaggactaaatc-aaaaaatgtttacaaacttaaacaacttacgtgtgaccaaaataacataaa 36052929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 9400070 - 9399908
Alignment:
Q  59 tttaagttgttttgatcacaaataagttcttt-aagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcat 157  Q
    |||||||| ||||| ||||| |||||| |||| |||||||||||| ||||||| ||| ||||||  ||||||||||||||| |||||||| |||||||||    
T  9400070 tttaagttattttggtcacacataagtccttttaagtttgtaaaccttttcaatttagtcattccgttaaccaaacattacaaaaatgatcatgtggcat 9399971  T
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    || |||||||| ||||  || ||||||| |||||||| ||||||||||||||||||||||||||||    
T  9399970 aatgactaaattgaaa--atgtttacaatcttaaaag-cttatgtgtgaccaaaataacttaaaga 9399908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 27128165 - 27127966
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaac 111  Q
    |||| ||| ||||||||||||||| |||||| ||||||||||||  ||||||||| ||||| ||||| ||||||| ||| ||| |||||||||||||||     
T  27128165 atcacacacaagtcctttaagtttaaggtttctaacaaattgatctttttaagttattttggtcacacataagttttttcagtctgtaaacgttttcaat 27128066  T
Q  112 ttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaa 211  Q
    ||| ||||||| ||||||           ||| |||||||||||| ||||||||||| ||||| |  |||||||||||||| ||||||||||||||||||    
T  27128065 ttagtcattctgttaacc----------caaacgatgatgtggcagaaggactaaattgaaaaca--tttacaaacttaaaggacttatgtgtgaccaaa 27127978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 14550070 - 14550243
Alignment:
Q  35 tttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaaca 134  Q
    |||||||||||||||| |||||| ||| |   |||||| | ||| |||||| |||||||||||||||||||||||| ||| || |||| |||||||||||    
T  14550070 tttgaggtttgtaacatattgatctttgaa--gttttggttacacataagtcctttaagtttgtaaacgttttcaatttattccttctgttaaccaaaca 14550167  T
Q  135 ttactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || | |||||||||||||| |||| ||| |||||  |||| || |||||||||||||| |||||||||||||||||||    
T  14550168 ttgcaaaaatgatgatgtgacatacggaataaat--aaaaaatgtttacaaacttaaatgacttatgtgtgaccaaaa 14550243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 254
Target Start/End: Complemental strand, 24827564 - 24827417
Alignment:
Q  106 ttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtg 205  Q
    ||||| ||| || ||||||||||||||  |||| |||| |||||||| ||| |||||||||||||||||  |||  ||||| ||||||||||||||||||    
T  24827564 ttcaatttagtccttctattaaccaaatgttacaaaaacgatgatgttgcagaaggactaaatcgaaaacgttt--acaaatttaaaagacttatgtgtg 24827467  T
Q  206 accaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    || ||||||||||||| ||  ||||||||||||| |||||| ||||||||    
T  24827466 actaaaataacttaaatgacaaatctattacaaacatcaaacttaaagga 24827417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 27855777 - 27855652
Alignment:
Q  92 agtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaa 191  Q
    ||||||||||||||||||| |||||  ||||||||| || ||||||  |||| |||||||||||| ||||||||||||||||| |  |||| ||||||||    
T  27855777 agtttgtaaacgttttcaatttaattcttctattaatcagacattaa-aaaacgatgatgtggcagaaggactaaatcgaaaaca--tttaaaaacttaa 27855681  T
Q  192 aagacttatgtgtgaccaaaataacttaa 220  Q
    | || |||| ||| ||||||| |||||||    
T  27855680 atgatttatatgtaaccaaaacaacttaa 27855652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 41151453 - 41151650
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| |||||||||||||||||| || |||||| |||| |  |||||||| ||||| ||||| |||||| ||||| ||||||||| |||||||| |    
T  41151453 atcacacataagtcctttaagtttgagtttagtaacagattggtcctttaagttattttggtcacacataagtcctttatgtttgtaaatgttttcaatt 41151552  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || |||| ||||||          |||| |||||||||||| || ||||||||  |||     |||||||||||||| |||||||||||||||||||    
T  41151553 tagtccttctgttaacc----------aaaacgatgatgtggcagaatgactaaattcaaa--ccgtttacaaacttaaaggacttatgtgtgaccaaaa 41151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 20209540 - 20209454
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||| |||| ||||||||||||||||| ||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||    
T  20209540 aagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttc 20209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 20229248 - 20229162
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    ||||| |||| ||||||||||||||||| ||||||  |||||||| ||||| |||||||||||| |||||||||||||||| |||||    
T  20229248 aagtcttttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttc 20229162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 24083305 - 24083206
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaac 128  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |    | |||||||||||||||| ||||||| |||  | |||| |||||    
T  24083305 tttaagtttgaggtttgtaacagattgatttttaagttattttgatcacata----tcctttaagtttgtaaacattttcaatttagcccttctgttaac 24083210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 6220521 - 6220448
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||  ||||| ||||||||||||||||||    
T  6220521 gtcctttaagtttgaggtttgtaacaaattggttctttaagttatttttgtcacacataagttctttaagtttg 6220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 15563916 - 15563848
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||  | |||||||||    
T  15563916 caaacttaaaagacttatgtgtgactaaaataacttaaaaattaatctgttacaaaccttaaatttaaa 15563848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 27127938 - 27128019
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| |||||| ||||||||||||||| ||||||||    
T  27127938 tttaagtttgag-tttgtaacagattgattctttaagttattttggtcacacataagtcctttaagtttgtaaatgttttcaa 27128019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 24909742 - 24909669
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| |||||||||||||| |  |||||||| ||||||||||| |||||| |||||||||||    
T  24909742 gtcctttaagtttgagatttgtaacaaattggtcctttaagttattttgatcacacataagtcctttaagtttg 24909669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 27128218 - 27128142
Alignment:
Q  20 cagaagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||| |||||||||||||||||||||||| | |||| |||||| ||| ||||||||||| | |||| ||||||||||    
T  27128218 cagaggtcctttaagtttgaggtttgtaatagattggtttttaggttattttgatcacacacaagtcctttaagttt 27128142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 6220348 - 6220458
Alignment:
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaa 238  Q
    |||||||||||||| || ||||||||||| |||||  |||    ||||||||| |||||||||||||||| |||||||||||| |  ||||| |||||||    
T  6220348 aaaatgatgatgtgacagaaggactaaattgaaaacgttta---aaacttaaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaa 6220444  T
Q  239 tatcaaatttaaag 252  Q
    | ||||| ||||||    
T  6220445 tctcaaacttaaag 6220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 15564043 - 15564116
Alignment:
Q  180 ttacaaacttaaaagacttatgtgtgaccaaaataactta-aagattaatctattacaaatatcaaatttaaag 252  Q
    ||||||| ||||| ||||||||||| || ||||||||||| ||||| |||||||||||||  ||||||||||||    
T  15564043 ttacaaatttaaaggacttatgtgtaacaaaaataacttagaagatcaatctattacaaacttcaaatttaaag 15564116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24827356 - 24827429
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| |||| |  |||||||| | |||||||||| ||||| |||||||||||    
T  24827356 gtcctttaagtttgaggtttgtaacagattggtcatttaagttatattgatcacaactaagtcctttaagtttg 24827429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 41151404 - 41151477
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| ||||||||| |||| |  |||||||| ||||||||||| |||||| |||||||||||    
T  41151404 gtcctttaagtttgagttttgtaacatattggtcctttaagttattttgatcacacataagtcctttaagtttg 41151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 41151560 - 41151498
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||| ||||| ||||  |||||| |||| |||||||||||||||||||||||||||||    
T  41151560 aaggactaaattgaaaacattt--acaaacataaaggacttatgtgtgaccaaaataacttaaag 41151498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 9400027 - 9400071
Alignment:
Q  179 tttacaaacttaaaag-acttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  9400027 tttacaaacttaaaaggacttatgtgtgaccaaaataacttaaag 9400071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 20209525 - 20209597
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| ||||||||||||||||||||||||||| ||||| || |||| | |||||||  ||||||||||||||    
T  20209525 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagga 20209597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 20229233 - 20229305
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||| ||||||||||||||||||||||||||| ||||| || |||| | |||||||  ||||||||||||||    
T  20229233 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacctcaaatttaaagga 20229305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 14550276 - 14550315
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  14550276 caaacttaaaagacttatgtatgaccaaaataacttaaag 14550315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 28618880 - 28618829
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||| ||||| |||||||||| || |||||||||||||||||||||||    
T  28618880 tttaagttattttggtcacaaataaattttttaagtttgtaaacgttttcaa 28618829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 16912999 - 16913073
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||| ||||||| ||||||| ||| || | ||||||||| ||||||||||| |||| |||||||||||||    
T  16912999 agtcctttatgtttgagatttgtaataaaatggtcttttaagttattttgatcacatataaattctttaagtttg 16913073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 27052659 - 27052729
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaag 252  Q
    |||||||||| |||||||||| ||| |||||||||||||| || |||||||||||||  ||||| ||||||    
T  27052659 caaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 36053047 - 36053121
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| | |||||||  |||||||||||    
T  36053047 ttttacaaacttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaa 36053121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 41151680 - 41151586
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||||||| | ||||||||||| |||| |  |||||||| ||||| ||||| |||||| ||||||||||||||||| ||| || ||| |||||||    
T  41151680 tttaagttcgtggtttgtaacagattggtcctttaagttcttttggtcacacataagtcctttaagtttgtaaacggtttgaatttagtcattct 41151586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 9400161 - 9400092
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||| ||||||  |||||||| ||||| ||||| |||| |||||| ||||||    
T  9400161 tttaagtttgaggtttgtaacatattgatcgtttaagttattttggtcacacataaattctttgagtttg 9400092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 20209431 - 20209521
Alignment:
Q  147 tgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||| | || ||||| ||||||||| |||  |||||||||||  |||||| |||||||||||||||||||| ||| ||||| |||||||    
T  20209431 tgatgtggtaaaatgactatatcgaaaatgttt--acaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaa 20209521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 20229139 - 20229229
Alignment:
Q  147 tgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||| | || ||||| ||||||||| |||  |||||||||||  |||||| |||||||||||||||||||| ||| ||||| |||||||    
T  20229139 tgatgtggtaaaatgactatatcgaaaatgttt--acaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaa 20229229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 22813532 - 22813459
Alignment:
Q  81 taagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtgg 154  Q
    ||||| |||||||||||||||||||||||| ||| |  ||   ||||||||||||||| |||| ||||||||||    
T  22813532 taagtcctttaagtttgtaaacgttttcaatttagtttttaggttaaccaaacattacaaaaacgatgatgtgg 22813459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 24909603 - 24909648
Alignment:
Q  177 tttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||    
T  24909603 tttttacaaacttaaaggacttatgcgtgaccaaaataatttaaag 24909648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 27052567 - 27052638
Alignment:
Q  145 gatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||| ||||||||||||||||  |  ||||||||||||||    |||||||||| |||||||||||||||    
T  27052567 gatgatgtggcaaaaggactaaatcgaaa--aagtttacaaacttaaa----ttatgtgtgatcaaaataacttaaag 27052638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 27052674 - 27052592
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||||||||||| ||||| |||| |  |||||||| ||||||||||| ||||    ||||||||||||||| |||||    
T  27052674 aagtcctttaagtttgaggtttataacagattggtcctttaagttattttgatcacacataa----tttaagtttgtaaactttttc 27052592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 6220463 - 6220376
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||||||||||||| ||||||||| |||| |  |||||||| || || ||||| |||||| |||||||||| |||||||||||||    
T  6220463 aagttctttaagtttgagatttgtaacagattggtactttaagttattgtggtcacacataagtcctttaagttt-taaacgttttcaa 6220376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 9399815 - 9399887
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||||||||||||||||||||||||| |||| || ||||||||  |||| |||||  ||||| ||||||||||    
T  9399815 gtcctttaagtttgaggtttgtaacatattggttctttaagttactttggtcacacgtaagtcctttaagttt 9399887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 14895218 - 14895126
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    ||||||||||||| ||||||| |||||| | | |||||| | |||   ||| |||| | |||||||||||||||||||||||| ||| |||||    
T  14895218 ctttaagtttgagttttgtaataaattggtctctaagttatattggctacatataaatcctttaagtttgtaaacgttttcaatttagtcatt 14895126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 101
Target Start/End: Complemental strand, 24909693 - 24909605
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    |||| ||| ||||||||||||||||||||||||| || |||| |  ||||| || ||||| ||||  |||||| |||||||||||||||    
T  24909693 atcacacataagtcctttaagtttgaggtttgtagcagattggtcctttaaattattttggtcacgcataagtcctttaagtttgtaaa 24909605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 24909669 - 24909741
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||||| |||||||||||||| ||  ||| | |||||||| ||||| ||||||||    
T  24909669 caaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgttacaaatctcaaacttaaagga 24909741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 29427958 - 29427998
Alignment:
Q  181 tacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  29427958 tacaaacttaaaggacttatgtatgaccaaaataacttaaa 29427998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 41151673 - 41151741
Alignment:
Q  185 aacttaaaag-acttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||| ||||||||||||||||||||||||||| || |||||| |||||||  ||||| |||||    
T  41151673 aacttaaaaggacttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaa 41151741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 27052479 - 27052408
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaa-agattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||||| |||||| ||||||||||||  ||  ||||||||||||| |||||| ||||||||    
T  27052479 aaacttaaatgacttatatgtgactaaaataacttaagggaccaatctattacaaacatcaaacttaaagga 27052408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 27052540 - 27052501
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  27052540 caaacttaaaggacttatgtgtgaccgaaataacttaaag 27052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 28618838 - 28618881
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||||||| | |||| |||||||||||||||||||||    
T  28618838 tttacaaacttaaaaaatttatttgtgaccaaaataacttaaag 28618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 41151477 - 41151438
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  41151477 caaacttaaaggacttatgtgtgatcaaaataacttaaag 41151438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 9399873 - 9399970
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattga-tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    ||||||||||||||| |||||||||| | | ||| | |||||||| ||||| ||||| ||||| | |||||| |||||||| ||||||| ||| |||||    
T  9399873 aagtcctttaagtttaaggtttgtaatagagtgactctttaagttattttggtcacacataagct-tttaagattgtaaacattttcaatttagtcatt 9399970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 20209268 - 20209333
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagt 94  Q
    ||||||||||||| ||||||||||||||   |  ||||||| ||||| ||||| |||||||||||||||    
T  20209268 tcctttaagtttgtggtttgtaacaaat---tagttaagttattttggtcacacataagttctttaagt 20209333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 20209415 - 20209352
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||||||| |||||| |||  |||||||||||  | |||| ||||||||||||||||||||||    
T  20209415 aaggactaaatagaaaatgttt--acaaacttaaagtatttatttgtgaccaaaataacttaaaga 20209352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 20228976 - 20229041
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagt 94  Q
    ||||||||||||| ||||||||||||||   |  ||||||| ||||| ||||| |||||||||||||||    
T  20228976 tcctttaagtttgtggtttgtaacaaat---tagttaagttattttggtcacacataagttctttaagt 20229041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 20229123 - 20229060
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||||||| |||||| |||  |||||||||||  | |||| ||||||||||||||||||||||    
T  20229123 aaggactaaatagaaaatgttt--acaaacttaaagtatttatttgtgaccaaaataacttaaaga 20229060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 24083296 - 24083334
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  24083296 caaacttaaaagccttatgtgtgatcaaaataacttaaa 24083334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 24793055 - 24793133
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacatta 137  Q
    ||||| || ||||| | ||| |||||| |||||| ||||||||  ||||||| ||||||||| | ||||||||||||||    
T  24793055 tttaaattattttggttacacataagtactttaaatttgtaaaaattttcaatttaatcattatgttaaccaaacatta 24793133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 27052729 - 27052659
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||  || || |||||| |||||||||||    
T  27052729 ctttaagtttgaggtttgtaatagattgattctttaagttatttttgtcgcacataagtcctttaagtttg 27052659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 27127877 - 27127938
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagtt 86  Q
    |||||||||||||||| ||||||||| |||| || |||||||| ||||||||||| |||||||    
T  27127877 gtcctttaagtttgag-tttgtaacagattggttatttaagttattttgatcacacataagtt 27127938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 27128076 - 27128118
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||| ||| |||| |||||||||||||||||||||||||||    
T  27128076 tttacagactgaaaaaacttatgtgtgaccaaaataacttaaa 27128118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 27128142 - 27128212
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||| ||||||| ||||||||| |||| |  |||||||||||||  ||||| ||||||||    
T  27128142 aaacttaaaggacttgtgtgtgatcaaaataacctaaaaaccaatctattacaaacctcaaacttaaagga 27128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 6220182 - 6220255
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||| ||||||||| |  |||||||| ||||  | ||| |||||| |||||||||||    
T  6220182 gtcctttaagtttgaggtttgaaacaaattggtcctttaagttatttttgtaacagataagtcctttaagtttg 6220255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 20209354 - 20209403
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||| ||||| |||||||||| | |||||||||||||||| |||||    
T  20209354 tttaagttattttggtcacaaataaatactttaagtttgtaaacattttc 20209403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 20229062 - 20229111
Alignment:
Q  59 tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||| ||||| |||||||||| | |||||||||||||||| |||||    
T  20229062 tttaagttattttggtcacaaataaatactttaagtttgtaaacattttc 20229111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22813181 - 22813144
Alignment:
Q  182 acaaacttaaaagacttatgtgtgaccaaaataactta 219  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  22813181 acaaacttaaatgacttatgtgtgatcaaaataactta 22813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 38415066 - 38415029
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagtt 66  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  38415066 tttaagtttgaggtttgtaacatattaatttttaagtt 38415029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 38415076 - 38415125
Alignment:
Q  203 gtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||||||||||||||||  ||||||| ||  ||||||||||||    
T  38415076 gtgaccaaaataacttaaagattatactattactaaattcaaatttaaag 38415125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 6220448 - 6220488
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    ||||||||||  ||||||||||||| |||||||||||||||    
T  6220448 caaacttaaagaacttatgtgtgacaaaaataacttaaaga 6220488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 15563848 - 15563916
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||| ||| |||||||||||| ||| ||||||||||| ||||  ||||| ||||||  ||||||||||    
T  15563848 tttaaatttaaggtttgtaacagattaatttttaagttattttagtcacacataagtcttttaagtttg 15563916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 36052893 - 36052977
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||||||||||||| ||||  |||| ||||||  |||| ||| ||||| |||||  |||||| ||||||||||||||| ||||    
T  36052893 agtcctttaagtttgaagtttacaacagattgatcatttatgttattttggtcacacgtaagttgtttaagtttgtaaacatttt 36052977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 42 - 254
Target Start/End: Original strand, 12592255 - 12592467
Alignment:
Q  42 tttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattacta 140  Q
    ||||||||| ||||||  |||||||| ||||| ||||| |||| |  | ||||||||||||||||||||| ||| ||||||| | ||||||||||||| |    
T  12592255 tttgtaacagattgatcatttaagttattttggtcacacataaatcttgtaagtttgtaaacgttttcaatttagtcattctgtcaaccaaacattacaa 12592354  T
Q  141 aaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaat 239  Q
    ||| ||||||||| || ||||||||||||||||  | ||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||     
T  12592355 aaacgatgatgtgacagaaggactaaatcgaaa--acttttacaaacttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaac 12592452  T
Q  240 atcaaatttaaagga 254  Q
     ||||| ||||||||    
T  12592453 ttcaaacttaaagga 12592467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 238
Target Start/End: Complemental strand, 45787298 - 45787099
Alignment:
Q  39 aggtttgtaacaaatt-gatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacatta 137  Q
    |||||||||| ||||| | |||||||||| ||||||||||| ||||||| |||||||||| |||||||||||| ||| ||||||| ||||||||| ||||    
T  45787298 aggtttgtaataaattagttttttaagttattttgatcacacataagttttttaagtttgcaaacgttttcaatttagtcattcttttaaccaaatatta 45787199  T
Q  138 ctaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattaca 236  Q
    | ||||  |||||||| || ||| ||||||||||||  || |||| ||||||||| | ||||||||| |||||||||| ||||| ||| ||||| |||||    
T  45787198 caaaaacaatgatgtgacagaagaactaaatcgaaa--atgtttataaacttaaatgtcttatgtgtaaccaaaataagttaaatgatcaatctgttaca 45787101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 40147009 - 40147206
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||||||| ||||||||||||||||| | ||||||  ||| ||| ||||| ||||| || ||| ||||||| ||||||| |||||||  ||| || || |    
T  40147009 aagtccttgaagtttgaggtttgtaatagattgatccttaggttattttggtcacacatgagtcctttaaggttgtaaatgttttcagtttattccttat 40147108  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
     ||||||||||||||| |||| ||||||||| || ||||||||||||||||  || |||||||| ||||| ||||||| |||||  ||||||||||||||    
T  40147109 gttaaccaaacattacaaaaacgatgatgtgacagaaggactaaatcgaaa--atgtttacaaatttaaaggacttatatgtgagaaaaataacttaaag 40147206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 223
Target Start/End: Original strand, 51950545 - 51950726
Alignment:
Q  41 gtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattact 139  Q
    ||||||| || |||||| ||||||||| ||||| ||||| |||||| ||||||||||||||| |||||||| ||| || |||||||||| | || ||||     
T  51950545 gtttgtagcagattgatcttttaagttattttggtcacacataagtcctttaagtttgtaaatgttttcaatttagtccttctattaacgagacgttaca 51950644  T
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||| || || |||||||| ||||  || |||||||||||||| ||||||||| | |||||| |||||||||||    
T  51950645 aaaatgatgatgtgacaaaatgactaaattgaaa--atgtttacaaacttaaaggacttatgtataaccaaattaacttaaaga 51950726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 24369186 - 24369344
Alignment:
Q  98 taaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagact 197  Q
    ||||||||||||| ||| || || | |||||||||| |||| || |||||||||||||| || |||||||||||||| |  |||||||||||||| ||||    
T  24369186 taaacgttttcaatttagtccttttgttaaccaaacgttacaaacatgatgatgtggcaaaaagactaaatcgaaaaca--tttacaaacttaaaggact 24369283  T
Q  198 tatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaaggaatt 257  Q
    || ||||||| ||||||||||||| ||  |||||||||||||  ||||| |||||||||||    
T  24369284 taggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaaggaatt 24369344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 156
Target Start/End: Original strand, 17231990 - 17232119
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatta 126  Q
    ||||||||||||||||||||||| ||   | ||||||||| ||||||||||| ||||||  ||||||||||||||||||||||| ||| |  |||| |||    
T  17231990 ctttaagtttgaggtttgtaacagataagtcttttaagttattttgatcacacataagtcttttaagtttgtaaacgttttcaatttagttcttctgtta 17232089  T
Q  127 accaaacattactaaaatgatgatgtggca 156  Q
    |||||||||||| |||| ||||||||||||    
T  17232090 accaaacattacaaaaacgatgatgtggca 17232119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 41519237 - 41519395
Alignment:
Q  61 taagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataag 160  Q
    |||||| ||||  ||| |||||||| |||||||||||||||||||||||| ||  || || | ||||||||||||||| |||| ||| | ||| || |||    
T  41519237 taagttattttagtcaaaaataagtcctttaagtttgtaaacgttttcaatttggtctttatgttaaccaaacattacaaaaacgattaagtgtcaaaag 41519336  T
Q  161 gactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    || ||||||  ||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  41519337 gattaaatc--aaaaatgtttacaaacttaaaagacttatgtgtgactaaaatgacttaaa 41519395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 2787944 - 2788138
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    ||||| ||||||||| |||||||||||| |||  |||| ||||| ||||| ||||| ||||||  |||||||||||||| |||||||| ||| || ||||    
T  2787944 aagtcatttaagtttaaggtttgtaacatatttgtttt-aagttattttggtcacacataagtcatttaagtttgtaaatgttttcaa-ttagtctttct 2788041  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
     ||||||||||| ||| |||  |||||||||||| ||| ||||||||||||  || ||||| ||||| || ||||||| | |||||||||| ||||||||    
T  2788042 gttaaccaaacactacaaaaccgatgatgtggcagaagaactaaatcgaaa--atgtttaccaactt-aaggacttatctctgaccaaaatgacttaaag 2788138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 26782450 - 26782352
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagg 253  Q
    |||||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||  ||||| |||||||||||||| |||||||    
T  26782450 cataaggactaaattgaaaat--ttttacaaacttaaaagactta-gtgtgaccaaaataacttaaaggaccaatctgttacaaatatcaaacttaaagg 26782354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 55617627 - 55617441
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatt 125  Q
    ||||||||||||||||||| |||| |||  | ||||||||| ||||  ||||| ||||||  |||||||||||||| |||||||| ||| || || | ||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagtg-tttaagtttgtaaatgttttcaatttagtccttttgtt 55617529  T
Q  126 aaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataa 215  Q
    ||  ||||||||| |||| ||||||||| || || |||||||||  ||| ||||||||||||||||| |  ||||||||||| |||||||    
T  55617528 aattaaacattacaaaaacgatgatgtgtcagaatgactaaatc--aaacatttttacaaacttaaatgttttatgtgtgactaaaataa 55617441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 55624931 - 55624745
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatt 125  Q
    ||||||||||||||||||| |||| |||  | ||||||||| ||||  ||||| ||||||  |||||||||||||| |||||||| ||| || || | ||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagtg-tttaagtttgtaaatgttttcaatttagtccttttgtt 55624833  T
Q  126 aaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataa 215  Q
    ||  ||||||||| |||| ||||||||| || || |||||||||  ||| ||||||||||||||||| |  ||||||||||| |||||||    
T  55624832 aattaaacattacaaaaacgatgatgtgtcagaatgactaaatc--aaacatttttacaaacttaaatgttttatgtgtgactaaaataa 55624745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 45038456 - 45038356
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| |||| |  |||||||| ||||| ||||| |||||| |||||||||||||||||||||| | ||| ||||||    
T  45038456 aagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcgatttagtcattc 45038357  T
Q  122 t 122  Q
    |    
T  45038356 t 45038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 12498799 - 12498714
Alignment:
Q  134 attactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||| |||| |||||||||||| ||||||||||| |||| |  ||||||||||||||| || |||||||||||||||||||||||||    
T  12498799 attacaaaaaagatgatgtggcagaaggactaaattgaaatt--ttttacaaacttaaaggatttatgtgtgaccaaaataacttaaa 12498714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 41083111 - 41083195
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttt 106  Q
    ||||||||||||||||| |||||||||| |||| |  |||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  41083111 aagtcctttaagtttgaagtttgtaacatattggtcctttaagttattttgatcacacataagtcctttaagtttgtaaacgttt 41083195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 50290354 - 50290215
Alignment:
Q  88 tttaagtttgtaaacgttttcaac-------ttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttt 180  Q
    |||||||||||||||||||||||        ||| ||||| | ||||||||| ||||| |||||||||||||| || || ||||||||| ||||||  ||    
T  50290354 tttaagtttgtaaacgttttcaaacttttatttattcattatgttaaccaaatattacaaaaatgatgatgtgacagaatgactaaatcaaaaata--tt 50290257  T
Q  181 tacaaacttaaaag-acttatgtgtgaccaaaataacttaaa 221  Q
    || ||||||||||| | |||||||||||||||||||||||||    
T  50290256 taaaaacttaaaagtatttatgtgtgaccaaaataacttaaa 50290215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 9999337 - 9999452
Alignment:
Q  14 atcaaacagaagtcctttaa-gtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||||||||| |||||| |||| ||||| |||| |||||||||| | ||| ||||| |||| ||||||||||||||||||||||| || |    
T  9999337 atcacacataagtcctttaaagtttgatgtttctaacatattggtttttaagttatattggtcacacataaattctttaagtttgtaaacgttttgaatt 9999436  T
Q  113 taatcattctattaac 128  Q
    ||||| |||| |||||    
T  9999437 taatctttctgttaac 9999452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 11884673 - 11884784
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgattttt-aagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| |||| |  || || || ||||  |||||| |||||||||||||||||||||| ||||| | ||| || |||    
T  11884673 aagtcctttaagtttgaggtttgtaacagattggtccttcaatttattttagtcacaactaagttctttaagtttgtaaacattttcgatttagtccttc 11884772  T
Q  122 tattaaccaaac 133  Q
    ||||||||||||    
T  11884773 tattaaccaaac 11884784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 12697271 - 12697142
Alignment:
Q  119 ttctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaa-gacttatgtgtgaccaaaataact 217  Q
    ||||||||| |||||||||| |||| ||||||||| ||||||||||||||  |||| || ||||||||||||||| ||||||||||||      ||||||    
T  12697271 ttctattaatcaaacattacaaaaacgatgatgtgacataaggactaaat--aaaaaatgtttacaaacttaaaaggacttatgtgtg------ataact 12697180  T
Q  218 taaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||| |||||| |||||| |||||| ||||||||    
T  12697179 taaatgatcaatctaatacaaacatcaaacttaaagga 12697142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 45038345 - 45038453
Alignment:
Q  145 gatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatca 243  Q
    |||||||||||| || ||||||||||||||  |||  ||||||||||| |||||||||||||||||||||||||||| ||  ||||| |||||||  |||    
T  45038345 gatgatgtggcagaatgactaaatcgaaaacgttt--acaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctca 45038442  T
Q  244 aatttaaagga 254  Q
    || ||||||||    
T  45038443 aacttaaagga 45038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 24684326 - 24684142
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    |||| ||||||||||||||||||||||| ||||  ||||||||| |||   ||||| |||||| |||||||||| ||||||||||| | ||| || ||||    
T  24684326 aagttctttaagtttgaggtttgtaacagattg-gttttaagttatttcagtcacacataagtcctttaagtttataaacgttttcgatttagtctttct 24684228  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
               ||||| |||| |||||||||||| ||| | ||||| ||||  |  ||||||||||||||||| |||||||| ||||||||||||||||    
T  24684227 -----------attacaaaaaagatgatgtggcaaaagaaataaattgaaa--acgtttacaaacttaaaagatttatgtgtaaccaaaataacttaaa 24684142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 41083328 - 41083147
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    ||||||||||||||| |||||| |||| | ||||||||| ||| | ||||| |||||| |||||||||||||||||||||| | ||| || ||           
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttcggtcacacataagtcctttaagtttgtaaacgttttcgatttagtcctt------- 41083236  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
        | ||||| |||| |||||||||||| |||||||||||   ||  |  |||||||||||||| ||||||||||||| |||||||||||||||    
T  41083235 ----atattacaaaaaagatgatgtggcaaaaggactaaatttgaa--acgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaag 41083147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 222
Target Start/End: Original strand, 53863365 - 53863562
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| ||||| |||||||| ||| ||||||||| |||| |  |||||||| ||||  ||||| |||||| ||||||||||||||| | |||||| |    
T  53863365 atcacacataagtcatttaagttcgagatttgtaacagattggtcctttaagttattttagtcacacataagtcctttaagtttgtaaaagatttcaatt 53863464  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || || | |||||||||          | || ||||||||| ||||||||||| |||||   ||||||||||||||| ||||||||  |||||||||    
T  53863465 tagtctttatgttaaccaaa----------acgacgatgtggcagaaggactaaattgaaaac--ttttacaaacttaaaggacttatgcatgaccaaaa 53863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 12498802 - 12498897
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||  |||  ||||| ||||||||||||||||||||| |||||| ||||| ||||| ||| |||||||| ||||| ||||||||    
T  12498802 aaggactaaatcgaaaacgttt--acaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaagga 12498897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 26782571 - 26782485
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattga-tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||||||| | ||||| |||||||||| ||||  ||||| ||||||  |||||||||||||| ||||||||    
T  26782571 gtcctttaagtttgaggtttgtaatatattgattttttaagttatttttgtcacatataagtcttttaagtttgtaaaagttttcaa 26782485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 2788229 - 2788160
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||| | ||||||||||    
T  2788229 ctttaagtttgaggtttgtaacaaattgatattttaagttattttggtcacacataaatcctttaagttt 2788160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 26782472 - 26782570
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagg 253  Q
    |||||||||||||| |||||   ||||||||||||||||||||||| |||||| |||||||||| ||| || ||| |||||||||  ||||| |||||||    
T  26782472 cataaggactaaattgaaaac--ttttacaaacttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaagg 26782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 40395156 - 40395244
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaatt-gatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||||||||||| ||| | | |||||||| ||||| ||||| |||| |  ||||||||||||| |||||||||    
T  40395156 aagtcctttaagtttgaggtttgtaacatattagttctttaagttattttggtcacacataaatcttttaagtttgtaagcgttttcaa 40395244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 46196167 - 46196255
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||||||||||||||| ||||||||||||||| |  |||||| | ||| || | ||||||||| |||||| |||||||||||||||||    
T  46196167 aagtcctttaagtttgacgtttgtaacaaattggtcctttaagatatttggagctcaaataagtcctttaaatttgtaaacgttttcaa 46196255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 51950625 - 51950564
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| ||||| ||||  ||||||||||| ||||||||||||||||||||||||||||    
T  51950625 aaggactaaattgaaaacattt--acaaacttaaaggacttatgtgtgaccaaaataacttaaa 51950564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 12592315 - 12592248
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaa 245  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  12592315 tttacaaacttacaagatttatgtgtgaccaaaataacttaaatgatcaatctgttacaaatttcaaa 12592248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 25055941 - 25056135
Alignment:
Q  26 tcctttaagtttgagg--tttgtaacaaattgattt-ttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattct 122  Q
    ||||||||||||||||  ||||||||| |||| |   ||||||| ||||  ||||| ||| |  |||||||| |||||| |||||| | ||| || ||||    
T  25055941 tcctttaagtttgaggattttgtaacagattgttccattaagttatttttgtcacacatatgacctttaagtatgtaaatgttttccatttagtccttct 25056040  T
Q  123 attaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
     ||||||||||||||| ||||  ||| ||||||| ||||||||||| ||||  |  |||||||||||||| ||||||  | ||||||||| |||||||    
T  25056041 gttaaccaaacattacaaaaactatgttgtggcagaaggactaaattgaaa--acgtttacaaacttaaatgactta-atatgaccaaaagaacttaa 25056135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 40395234 - 40395191
Alignment:
Q  180 ttacaaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  40395234 ttacaaacttaaaagatttatgtgtgaccaaaataacttaaaga 40395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 2470188 - 2470002
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||||||||| |||||||||||||| | |||| |  |||||||| ||||| ||||| ||||||  ||| ||| |||| || ||| | | ||| || ||     
T  2470188 aagtcctttaaatttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtctttttagtatgtatacctttccgatttagtcctta 2470089  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaa 211  Q
    | |||||||||| |||  ||||||||||||| | | || |||||||||||||  |  ||||||||||| |||||||||| ||||||||||    
T  2470088 tgttaaccaaacgttaaaaaaatgatgatgttgaaaaatgactaaatcgaaa--aggtttacaaactt-aaagacttatatgtgaccaaa 2470002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 2470111 - 2470185
Alignment:
Q  181 tacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||  ||| |||||||||  ||||||||||||||    
T  2470111 tacatactaaaaagacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaagga 2470185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 2788021 - 2787979
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  2788021 tttacaaacttaaatgacttatgtgtgaccaaaataacttaaa 2787979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 11884688 - 11884615
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||| |||||||||||||  ||||||| | |||||||  ||||||||||||||    
T  11884688 caaacttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaagga 11884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 12498959 - 12498885
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||| | ||||||  |||||||| |||| |||||| |||||| |||||||||||    
T  12498959 agtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 12498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 17232064 - 17232022
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  17232064 tttacaaacttaaaagacttatgtgtgatcaaaataacttaaa 17232022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 21322109 - 21322035
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||||| |||  | ||||||||| ||||| ||||| |||||| |||||||||||    
T  21322109 agtcctttaagtttgaggtttgtaacacatttttcttttaagttattttggtcacatataagtcctttaagtttg 21322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 40147242 - 40147156
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattga-tttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||| |||||||||||||||||||||||||||||   |||||||| ||||  ||||| |||||| |||||| ||||||||| |||||    
T  40147242 aagttctttaagtttgaggtttgtaacaaattgaccctttaagttatttttctcacatataagtcctttaaatttgtaaacattttc 40147156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 40147301 - 40147227
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||| ||| |||||| |  ||||||| |||||| ||||| ||||||||||||||||||    
T  40147301 agtcctttaagtttgaggtttataataaattggtcatttaagtcgttttggtcacacataagttctttaagtttg 40147227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 41083234 - 41083297
Alignment:
Q  156 ataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||||||||  |||  ||||||||||| ||||||||||||||| ||||||||||||    
T  41083234 ataaggactaaatcgaaaacgttt--acaaacttaaaggacttatgtgtgaccgaaataacttaaa 41083297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 12498691 - 12498623
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaa 250  Q
    |||||||||||||||||||||||| |||||||||||||  ||  |||||||||||||  ||||||||||    
T  12498691 aaacttaaaagacttatgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaa 12498623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 41083053 - 41083126
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| ||||||  |||||||| ||||  ||||| |||||| |||||||||||    
T  41083053 gtcctttaagtttgaggtttgtaacatattgatcatttaagttatttttgtcacatataagtcctttaagtttg 41083126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 50290472 - 50290403
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||| ||||| ||||||| ||||||||||    
T  50290472 tttaagtttgaggtttgtaataaattgatcatttaagttattttggtcacacataagttttttaagtttg 50290403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 50290403 - 50290472
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||  ||||| |||||    
T  50290403 caaacttaaaaaacttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaacttaaa 50290472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 2469971 - 2469899
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||| |||||||||||||||||||||| |  |||||||||||||  ||||| ||||||||    
T  2469971 caaacttaaaggacttaggtgtgaccaaaataacttaaagaaccaatctattacaaacctcaaacttaaagga 2469899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 7246188 - 7246301
Alignment:
Q  140 aaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaa 238  Q
    ||||||||||||| | ||||||||||||| ||||  | |||||||||||||||  ||||||||||||  |||||||  ||||| |  |||||||| ||||    
T  7246188 aaaatgatgatgtcgtataaggactaaattgaaa--acttttacaaacttaaagtacttatgtgtgataaaaataaactaaagaaccaatctattccaaa 7246285  T
Q  239 tatcaaatttaaagga 254  Q
    | ||||| ||||||||    
T  7246286 tctcaaacttaaagga 7246301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 7246361 - 7246289
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||| |||| | ||||||||| ||||| ||| | |||||| |||||||||||    
T  7246361 tcctttaagtttgaggtttgtaacatattggtcttttaagttattttggtcatacataagtcctttaagtttg 7246289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 11884895 - 11884811
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttt 106  Q
    ||||||||||||||| | |||||||||| |||| |  ||||| ||  |||| |||||||||||||||||||||||||||| ||||    
T  11884895 aagtcctttaagttttaagtttgtaacagattggtcctttaaattaatttggtcacaaataagttctttaagtttgtaaatgttt 11884811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 12498885 - 12498957
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||  ||||||||||||| ||| |||||||||||||  ||||| ||||||||    
T  12498885 caaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 12498957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 53863454 - 53863410
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  53863454 ttttacaaacttaaaggacttatgtgtgactaaaataacttaaag 53863410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 7246123 - 7246052
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||| ||||||||||| |||||||||||||||| ||  ||| | |||||||||||||| ||||||||    
T  7246123 aaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaacttaaagga 7246052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 11884614 - 11884688
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||| ||||  ||||| |||||| |||||||||||    
T  11884614 gtcctttaaatttgaggtttgtaacaaattaatccttttaagttatttttgtcacacataagtcctttaagtttg 11884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 40147087 - 40147028
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||||| |||||| |||| |||||||||||||||||| ||| ||| |||||||||||||    
T  40147087 tttacaaccttaaaggactcatgtgtgaccaaaataacctaaggatcaatctattacaaa 40147028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 45787365 - 45787299
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtt 95  Q
    |||||||||||||||||||| |||||||| ||||||||| ||||| ||||| || |||||||||||||    
T  45787365 tttaagtttgaggtttgtaataaattgattttttaagttattttggtcacacat-agttctttaagtt 45787299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 254
Target Start/End: Original strand, 40395281 - 40395376
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||  |||  ||||| ||||| ||||||||||||||  |||||||||||| || |||||| |||||||  ||||||||| ||||    
T  40395281 aaggactaaatcgaaaacgttt--acaaatttaaaggacttatgtgtgacagaaataacttaaaggactaatctgttacaaacctcaaatttagagga 40395376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 53863592 - 53863510
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||||||||||| ||||||||||||| |  |||||||| ||||| |||   |||||| ||||||||||||||| ||||||||    
T  53863592 tttaagtttgagggttgtaacaaattggtcctttaagttattttggtcatgcataagtcctttaagtttgtaaaagttttcaa 53863510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 12592469 - 12592384
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||||| |||||||| | |||||| ||||||||| | ||| ||| | ||||||  |||||||||||||| ||||||    
T  12592469 agtcctttaagtttgaagtttgtaatagattgatcttttaagttatattggtcatacataagtcttttaagtttgtaaaagttttc 12592384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 2469899 - 2469971
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||| | |||| || |||||||| ||||| |||||  ||||| |||||||||||    
T  2469899 tcctttaagtttgaggtttgtaatagattggttctttaagttattttggtcacacctaagtcctttaagtttg 2469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 7246064 - 7245992
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||| |||||||||||||||||| ||| || || |||||||  ||||| ||||||||    
T  7246064 caaacttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaagga 7245992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 7246304 - 7246216
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttg-ttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||| |||| || | |||| || || ||||  |||| |||||| |||||| ||||||||||||||| ||||||||    
T  7246304 aagtcctttaagtttgagatttggaatagattggttctttagtttatttttatcacacataagtactttaagtttgtaaaagttttcaa 7246216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 45038513 - 45038441
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||| | |||| |  |||||||| ||||  |||||||||||| |||||||||||    
T  45038513 tcctttaagtttgaggtttgtaatagattggtcatttaagttatttttgtcacaaataagtcctttaagtttg 45038441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 45038441 - 45038513
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||  |||||||||||||  ||||| ||||||||    
T  45038441 caaacttaaaggacttatttgtgacaaaaataacttaaatgaccaatctattacaaacctcaaacttaaagga 45038513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 55617623 - 55617687
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaagat-taatctattacaaatatcaaatttaaagga 254  Q
    |||| |||| |||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  55617623 aaaggcttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaaagga 55617687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 55624927 - 55624991
Alignment:
Q  191 aaagacttatgtgtgaccaaaataacttaaagat-taatctattacaaatatcaaatttaaagga 254  Q
    |||| |||| |||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  55624927 aaaggcttacgtgttaccaaaataacttaaagaactaatctattacaaacctcaaatttaaagga 55624991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 12498677 - 12498756
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    ||||| ||||||||| ||||||| || | |||||| ||||||||| ||||| ||||| |||| | |||||||||||||||    
T  12498677 aagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaa 12498756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 12698010 - 12698052
Alignment:
Q  195 acttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    ||||||||||||||||||||||||||| |||||||| |||||||    
T  12698010 acttatgtgtgaccaaaataacttaaa-attaatctgttacaaa 12698052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 222
Target Start/End: Complemental strand, 46196182 - 46196143
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  46196182 caaacttaaaggacttatttgtgaccaaaataacttaaag 46196143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 50290181 - 50290239
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataa 83  Q
    ||||||||||||||||||||||| ||||||||  ||||||||| ||||| ||||| ||||    
T  50290181 agtcctttaagtttgaggtttgttacaaattg-gttttaagttattttggtcacacataa 50290239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 7246049 - 7246123
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagttt 96  Q
    |||||||||||||||||  |||||||||||||| |  |||||||| ||||| | ||| |||||| ||||||||||    
T  7246049 aagtcctttaagtttgatatttgtaacaaattggtcgtttaagttattttggttacacataagtcctttaagttt 7246123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 7246289 - 7246327
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  7246289 caaacttaaaggacttatgtatgaccaaaataacttaaa 7246327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 9999564 - 9999482
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||||| |||| |  |||||||| ||||  ||||| ||||||  ||||| |||||||| ||||||||    
T  9999564 tttaagtttgaggtttgtaacagattggtcatttaagttatttttgtcacatataagtcatttaactttgtaaaagttttcaa 9999482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 17236840 - 17236774
Alignment:
Q  189 taaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| |||||||||||||||||||||||||||| || | || |||||||||| | ||| ||||||||    
T  17236840 taaaggacttatgtgtgaccaaaataacttaaatgacttatttattacaaattttaaacttaaagga 17236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 21322035 - 21322073
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  21322035 caaacttaaaggacttatatgtgaccaaaataacttaaa 21322073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 40147024 - 40146986
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  40147024 caaacttcaaggacttatgtgtgaccaaaataacttaaa 40146986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 44057328 - 44057366
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  44057328 caaacttaaatgacttatgtgtaaccaaaataacttaaa 44057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 45787239 - 45787277
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  45787239 caaacttaaaaaacttatgtgtgatcaaaataacttaaa 45787277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 46196398 - 46196292
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaatt-gatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| ||| ||   ||||||| ||||   | |||||||||  |||||||||| |||| ||||||| ||| || |||    
T  46196398 aagtcctttaagtttgaggtttgtaacagattggaccattaagttattttaggcgcaaataagtattttaagtttgcaaacattttcaatttagtccttc 46196299  T
Q  122 tattaac 128  Q
    | |||||    
T  46196298 tgttaac 46196292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 51950761 - 51950663
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||||||||||||| |||||||  || |||||| || ||||||||  |||| | | | |||||| |||||||||||||||| ||||||| ||| |||||    
T  51950761 aagtcctttaagttcgaggtttacaataaattggttctttaagttaatttggttatacataagtcctttaagtttgtaaacattttcaatttagtcatt 51950663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 2788160 - 2788197
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||| || |||||||||||||||||||||||||    
T  2788160 aaacttaaaggatttatgtgtgaccaaaataacttaaa 2788197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 7245991 - 7246064
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||| ||||||||||  |||||  |||||||| ||||| ||| | |||||| |||||||||||    
T  7245991 gtcctttaagtttgacgtttgtaacaggttgatcctttaagttattttggtcagacataagtcctttaagtttg 7246064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 25055953 - 25055884
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||| || |||||||| |||||||||||||||| ||  |||||||||||||  ||||| |||||    
T  25055953 caaacttaaaggatttatgtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaacttaaa 25055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 25056235 - 25056186
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttg 72  Q
    |||| ||||||||||||||||||||||||||| | ||||||||| |||||    
T  25056235 agtcttttaagtttgaggtttgtaacaaattggtcttttaagttattttg 25056186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 41083392 - 41083319
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| |||| |  |||||||| ||||| ||||| ||| ||  ||||||||||    
T  41083392 gtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacatatatgtcatttaagtttg 41083319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 45038318 - 45038281
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  45038318 caaacttaaaggacttatgtgtgaccgaaataacttaa 45038281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 53863387 - 53863350
Alignment:
Q  185 aacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  53863387 aacttaaatgacttatgtgtgatcaaaataacttaaag 53863350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 53863583 - 53863640
Alignment:
Q  183 caaacttaaaag-acttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||||    
T  53863583 caaacttaaaaggacttatgtgtgactaaaataacttaaacgaccaatctattacaaa 53863640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 2470173 - 2470229
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||| ||||| ||||||| |||||||||||||||||||| ||  |||||||||||||    
T  2470173 caaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatctattacaaa 2470229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 9999288 - 9999356
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaa 92  Q
    ||||||||||| |||||||||||||| ||| ||  |||| |||||| |||||||| |||||| ||||||    
T  9999288 gtcctttaagtctgaggtttgtaacagatttatcctttaggttgttctgatcacacataagtcctttaa 9999356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 11966851 - 11966795
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcaca 78  Q
    ||||||||||||||||||||| |||| ||||||||  ||||| || |||||||||||    
T  11966851 aagtcctttaagtttgaggttggtaataaattgatcatttaaattattttgatcaca 11966795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 41083126 - 41083054
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||| ||| | |||||||  ||||| ||||||||    
T  41083126 caaacttaaaggacttatatgtgacaaaaataacttaaatgatcaatatgttacaaacctcaaacttaaagga 41083054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 41083319 - 41083391
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||| ||| |||||||||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  41083319 caaacttaaatgacatatatgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 41083391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 45038191 - 45038251
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttc 87  Q
    ||||||||||||||||||||| | |||||| ||||||||| ||||| ||||  ||||||||    
T  45038191 ctttaagtttgaggtttgtaatatattgatcttttaagttattttggtcacgtataagttc 45038251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 55617534 - 55617594
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| ||||| ||||  |||||||||||  ||||||||||||| |||||||||||||    
T  55617534 aaggactaaattgaaaacattt--acaaacttaaac-acttatgtgtgactaaaataacttaaa 55617594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 55624838 - 55624898
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| ||||| ||||  |||||||||||  ||||||||||||| |||||||||||||    
T  55624838 aaggactaaattgaaaacattt--acaaacttaaac-acttatgtgtgactaaaataacttaaa 55624898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 100)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 1996202 - 1996430
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctat 124  Q
    ||||||||||||| ||||||||| | |||  |  |||||||| ||||| ||||| |||||| || ||||||||||||||||||||| ||| || || |      
T  1996202 tcctttaagtttggggtttgtaatagattagtcctttaagttattttggtcacacataagtcctataagtttgtaaacgttttcaatttagtctttttga 1996301  T
Q  125 taaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-ga 223  Q
    |||||||||||||| ||||  ||||||||||| || |||||||||||||  ||  ||||||||||||| | |||||| ||||||||||||| ||||| ||    
T  1996302 taaccaaacattacaaaaacaatgatgtggcagaatgactaaatcgaaa--atccttacaaacttaaatggcttatgagtgaccaaaataatttaaagga 1996399  T
Q  224 ttaatctattacaaatatcaaatttaaagga 254  Q
      ||||| |||||||  ||||| ||||||||    
T  1996400 acaatctcttacaaacctcaaacttaaagga 1996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 254
Target Start/End: Original strand, 16327155 - 16327376
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||||||||| |||| |  |||||||| ||||| | ||| |||||| |||||||||||||||||||||||| ||| || ||     
T  16327155 aagtcctttaagtttgaggtttgtaacagattggtcgtttaagttattttggtaacacataagtcctttaagtttgtaaacgttttcaatttagtcctta 16327254  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||||||          |||| |||||||||||| ||||||||||| ||||  |  ||||||||||||||  |||||| ||||||||||||||||||||    
T  16327255 tgttaacc----------aaaacgatgatgtggcagaaggactaaattgaaa--acgtttacaaacttaaagtacttatttgtgaccaaaataacttaaa 16327342  T
Q  222 -gattaatctattacaaatatcaaatttaaagga 254  Q
     ||| ||||| |||||||  ||||| ||||||||    
T  16327343 ggatcaatctgttacaaacctcaaacttaaagga 16327376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 16327379 - 16327291
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  16327379 aagtcctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacgttttcaa 16327291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 4943190 - 4942990
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttcttt-aagtttgtaaacgttttcaa 110  Q
    |||| ||| |||||||||||||||||  ||| ||||| ||||||  ||||||||| ||||| ||||| ||||||||||| |||||||||||| |||||||    
T  4943190 atcacacataagtcctttaagtttgaaatttataacagattgatccttttaagttattttggtcacacataagttcttttaagtttgtaaacattttcaa 4943091  T
Q  111 cttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaa 210  Q
     ||| ||||||||||||||          |||| ||||||||| || |||||||||||   ||| || |||||||||||||| ||||||||| ||| |||    
T  4943090 tttagtcattctattaacc----------aaaacgatgatgtgtcaaaaggactaaat--taaaaatgtttacaaacttaaaggacttatgtatgatcaa 4943003  T
Q  211 aataacttaaaga 223  Q
    ||||| |||||||    
T  4943002 aataatttaaaga 4942990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 5746381 - 5746189
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    |||||| ||||||||||||||||||| || |||||| || ||||| ||| | ||||||  |||||||||||||||||||| || ||| || |||| ||||    
T  5746381 tttaagcttgaggtttgtaacaaattaatcttttaaattattttggtcatacataagtcatttaagtttgtaaacgtttttaatttagtctttctgttaa 5746282  T
Q  128 ccaaacattactaaaatga-tgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||| |||| ||||  | |||||||| | ||| |||||||  |||| |  |||||||||||||| ||||||||| | ||||||||||||||||    
T  5746281 ccaaacgttacaaaaacaaatgatgtggtagaagaactaaat--aaaaaacgtttacaaacttaaaggacttatgttttaccaaaataacttaaa 5746189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 28559516 - 28559328
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    |||||||||||||||||||||| ||||| |||| |  ||||| || ||||  ||||| |||||| |||||||||| ||||||||||||| ||| ||||||    
T  28559516 aagtcctttaagtttgaggtttataacagattggtcctttaaattattttagtcacacataagtcctttaagtttataaacgttttcaatttagtcattc 28559417  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
      |||| ||||          | ||||||||| |||||||| ||||| |||||  |||  ||||||||||| ||||||||||||||||||||||||||||    
T  28559416 cgttaagcaaa----------acgatgatgtgccataaggattaaattgaaaacgttt--acaaacttaaaggacttatgtgtgaccaaaataacttaaa 28559329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 38682727 - 38682866
Alignment:
Q  98 taaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagact 197  Q
    ||||| ||||||| ||| |  ||||||||| ||||| |||| |||| ||| || ||||| || ||||||||||||||| |||  ||||||||||||||||    
T  38682727 taaacattttcaatttagttcttctattaatcaaactttacaaaaacgataatatggcagaaagactaaatcgaaaatgttt--acaaacttaaaagact 38682824  T
Q  198 tatgtgtgaccaaaataac-ttaaagattaatctattacaaa 238  Q
    ||||||| ||||||||||| |||| ||| |||||||||||||    
T  38682825 tatgtgtaaccaaaataactttaaggatcaatctattacaaa 38682866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 238
Target Start/End: Original strand, 35813397 - 35813559
Alignment:
Q  74 tcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaa 173  Q
    ||||| |||||| ||||||||||||||||||||||||  || || || |||||||||||   ||| |||| |||||||||| | ||| ||||||| ||||    
T  35813397 tcacacataagtcctttaagtttgtaaacgttttcaatatagtctttttattaaccaaattctacaaaaacgatgatgtggtagaagaactaaattgaaa 35813496  T
Q  174 atatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaa 238  Q
    | |  ||||||| |||||| ||||||||| ||| |||||||||||||| |  ||||| |||||||    
T  35813497 aca--tttacaatcttaaatgacttatgtatgagcaaaataacttaaaaacaaatctgttacaaa 35813559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 23662159 - 23661939
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||| ||||||||||||| |||||||||||||| |  ||||||||| ||||  ||  | |||| | ||| ||||||||||| |||||||| ||| || ||    
T  23662159 aagttctttaagtttgagatttgtaacaaattggttcttttaagttatttttgtcgtacataactccttcaagtttgtaaaagttttcaatttagtcctt 23662060  T
Q  121 ctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
     | ||||||          |||| |||||||| ||| | |||||||||  |||  | |||||||||||||||||||||||||||||||||||||||||||    
T  23662059 ttgttaacc----------aaaaggatgatgtcgcagatggactaaatttaaa--acttttacaaacttaaaagacttatgtgtgaccaaaataacttaa 23661972  T
Q  221 agattaatctattacaaatatcaaatttaaagga 254  Q
    | || ||||| | |||||||||||| ||||||||    
T  23661971 a-atcaatctgtcacaaatatcaaacttaaagga 23661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 23796556 - 23796631
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||| ||||||||    
T  23796556 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-atcaatctgtcacaaatatcaaacttaaagga 23796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 14604122 - 14604341
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||||||||||||||||||||||||||| ||||||  ||||| ||| ||||| ||||| |||||| |||||| ||||||||  || |||| ||| || ||    
T  14604122 aagtcctttaagtttgaggtttgtaacagattgatcattttatgttattttggtcacatataagtcctttaaatttgtaaattttatcaatttagtcctt 14604221  T
Q  121 ctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    || ||||||||||           |||||| ||||| ||||| ||||||| |||||  ||||||| |||||   ||||||||||||||||||||||||||    
T  14604222 ctgttaaccaaac-----------gatgatatggcagaaggaataaatcg-aaata-gtttacaatcttaacgaacttatgtgtgaccaaaataacttaa 14604308  T
Q  221 a-gattaatctattacaaatatcaaatttaaag 252  Q
    | ||  |||||||||||||  | ||||||||||    
T  14604309 aggaccaatctattacaaactttaaatttaaag 14604341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 25456323 - 25456550
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaact 112  Q
    |||| ||| |||||||||||||||||||||||||||| |||| |  |||||||| ||||| ||||||||||||  |||||||| ||||| |||||| | |    
T  25456323 atcacacataagtcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataagtcttttaagttggtaaatgttttcgatt 25456422  T
Q  113 taatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaa 212  Q
    || || ||||||||| ||||||           |||| |||| | ||||| ||||||  ||| | ||||| |||||||||||| || | |||||||||||    
T  25456423 tagtccttctattaagcaaaca-----------atgacgtggtagaaggattaaatc--aaaaacttttaaaaacttaaaagaattctttgtgaccaaaa 25456509  T
Q  213 taacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||| ||  |||||||||||||  ||||| ||||||    
T  25456510 taacttaaaggaccaatctattacaaacctcaaacttaaag 25456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 7209848 - 7209976
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctat 124  Q
    ||||||| ||||||||||||||| ||||   |  |||||||| ||||| ||||| |||||| |||||||||||||||||||||||| ||| |  || | |    
T  7209848 tcctttatgtttgaggtttgtaataaatacgtcatttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagttcttatgt 7209947  T
Q  125 taaccaaacattactaaaatgatgatgtg 153  Q
    |||||||||||||| |||| |||||||||    
T  7209948 taaccaaacattacaaaaacgatgatgtg 7209976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 33491786 - 33491605
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    |||||||||||| ||||| |||||||||||  ||||||| ||||| ||||| || ||| ||||||||| ||| |||||||||| ||| |  |||| ||||    
T  33491786 ctttaagtttgaagtttgcaacaaattgatcattaagttattttggtcacacatgagt-ctttaagttcgtagacgttttcaatttagttcttctgttaa 33491688  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    ||||| |          ||||||| |||| ||||||||||| ||||||  ||||||||| ||||| ||||||| ||||| |||||||||||||||    
T  33491687 ccaaaaa----------gatgatgcggcagaaggactaaattgaaaat--ttttacaaagttaaaggacttatctgtgatcaaaataacttaaag 33491605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 35461493 - 35461605
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||||| ||||||||| |||||||||| |||| |  ||||| || |||||||||||||||||| ||||||||||||||| |||||| | ||| || ||     
T  35461493 aagtcctgtaagtttgaagtttgtaacagattggtcctttaaattattttgatcacaaataagtcctttaagtttgtaaaagttttcgatttagtcctta 35461592  T
Q  122 tattaaccaaaca 134  Q
    |||||||||||||    
T  35461593 tattaaccaaaca 35461605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 36760875 - 36760764
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctat 124  Q
    ||||||||||||||||||||||||| || |||  |||||||| ||| | ||||| ||||||  ||| ||||||||||| ||||||| ||| || ||||||    
T  36760875 tcctttaagtttgaggtttgtaacagatagataatttaagttatttcggtcacacataagtctttttagtttgtaaacattttcaatttagtccttctat 36760776  T
Q  125 taaccaaacatt 136  Q
    ||||||||||||    
T  36760775 taaccaaacatt 36760764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 20928000 - 20927905
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||| |||  ||||||||||||||||||  |||||||||||||||||||| ||  ||| |||||||||  ||||||||||||||    
T  20928000 aaggactaaatcgaaaatgttt--acaaacttaaaagacttacttgtgaccaaaataacttaaatgaccaatttattacaaacctcaaatttaaagga 20927905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 12713167 - 12713055
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttcttt--aagtttgtaaacgttttcaacttaatcat 119  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||| ||||| ||||  ||||  |||||  |||||||||||||||||||| ||| ||||    
T  12713167 aagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataaagtctttttaagtttgtaaacgttttcaatttagtcat 12713068  T
Q  120 tctattaaccaaa 132  Q
    ||| |||||||||    
T  12713067 tctgttaaccaaa 12713055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 12774431 - 12774319
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttc--tttaagtttgtaaacgttttcaacttaatcat 119  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||| ||||| ||||  ||||  ||  ||||||||||||||||||||||| ||| ||||    
T  12774431 aagtcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataaagtccttttaagtttgtaaacgttttcaatttagtcat 12774332  T
Q  120 tctattaaccaaa 132  Q
    ||| |||||||||    
T  12774331 tctgttaaccaaa 12774319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 28559302 - 28559387
Alignment:
Q  33 agtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatc 117  Q
    |||||||||||||||||| |||| |  |||||||| ||||| ||||| |||||| |||||||||||||||||||||||| ||||||    
T  28559302 agtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttaatc 28559387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 36759665 - 36759786
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctatta 126  Q
    |||||||||||| |||||||||| ||   || ||||| || ||||| ||||  |||||| ||||||||||||||| |||||||| ||| ||||| | |||    
T  36759665 ctttaagtttgatgtttgtaacagataagttctttaaattattttggtcacttataagtcctttaagtttgtaaatgttttcaatttagtcattatgtta 36759764  T
Q  127 accaaacattactaaaatgatg 148  Q
    |||||||||||| |||||||||    
T  36759765 accaaacattacaaaaatgatg 36759786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 10827379 - 10827275
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    |||||||||||| ||||||||| ||||||  ||||| || ||||| ||||||| |||| |||||||||||||||||||||| | ||| || ||| |||||    
T  10827379 tttaagtttgagttttgtaacagattgatcctttaaattattttggtcacaaacaagtcctttaagtttgtaaacgttttcgatttagtccttccattaa 10827280  T
Q  128 ccaaa 132  Q
    |||||    
T  10827279 ccaaa 10827275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 32361240 - 32361168
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||||  ||||||||||||||    
T  32361240 caaacttaaataacttatgtgtgaccaaaataacttaaatgatcaatctattacaaacttcaaatttaaagga 32361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 35812196 - 35811967
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgattttt-aagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| |||||||||||| ||||||||  ||||||  |  ||||| ||||| ||||| |||| |  ||||| ||| ||||  |||| |  ||| ||||||    
T  35812196 aagtcatttaagtttgagatttgtaactgattgatcctcgaagttattttggtcacacataaatcatttaaatttataaatatttttattttagtcattc 35812097  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||| |||| ||||  |||||||||||  | || |||||  |||| || ||||||||||||||  |||||| | |||||||||||| |||||    
T  35812096 tattaaccaaactttacaaaaacaatgatgtggcaggatgaataaat--aaaaaatgtttacaaacttaaagtacttatatatgaccaaaataatttaaa 35811999  T
Q  222 -gattaatctattacaaatatcaaatttaaag 252  Q
     ||| || |||||||||  |||||||||||||    
T  35811998 tgatcaacctattacaatcatcaaatttaaag 35811967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 222
Target Start/End: Original strand, 37642851 - 37643038
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| ||||||||| | ||||||||||  ||| |  |||||||| ||||| || ||||||| | |||||||||||||||||||||| | ||| ||||||    
T  37642851 aagtcgtttaagttttaagtttgtaacatgttgctcatttaagttattttggtctcaaataaatcctttaagtttgtaaacgttttcgatttagtcattc 37642950  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||           ||| |||||||||| | ||||||||| ||||||     |||||||||||||| ||||||| |||||||||||||| |||||    
T  37642951 tattaacc-----------aaaagatgatgtggtaaaaggactaattcgaaa--ccgtttacaaacttaaaggacttatttgtgaccaaaataatttaaa 37643037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 10074068 - 10074186
Alignment:
Q  119 ttctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtga-ccaaaataact 217  Q
    |||||||||||||||||||| ||||||||||| | | | ||||| ||||||||||  || ||||||||||||||| ||||||||||||   ||||| |||    
T  10074068 ttctattaaccaaacattacaaaaatgatgatatagtagaaggattaaatcgaaa--atgtttacaaacttaaaa-acttatgtgtgataaaaaattact 10074164  T
Q  218 taaa-gattaatctattacaaa 238  Q
    |||| ||||||||| |||||||    
T  10074165 taaatgattaatctgttacaaa 10074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 19550171 - 19550101
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaag 252  Q
    |||||||||||||||||||||| ||||||||||||||||| || |||||||||||||  ||||| ||||||    
T  19550171 caaacttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 19550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 20927902 - 20928008
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||||||||| |||||||||||||| |||||| |  |||||||| ||||| |||||| |||||  ||||||||||||||| ||||| | ||| || |||    
T  20927902 aagtcctttaaatttgaggtttgtaataaattggtcatttaagttattttggtcacaagtaagtcttttaagtttgtaaacattttcgatttagtccttc 20928001  T
Q  122 tattaac 128  Q
    |||||||    
T  20928002 tattaac 20928008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 25456430 - 25456335
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||| ||||  || |||||||||||||||| |||||||||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  25456430 aaggactaaatcgaaaacattt--accaacttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 25456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 40980710 - 40980783
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||| | ||||||  |||||||| ||||||||||| |||||| |||||||||||    
T  40980710 gtcctttaagtttgaggtttgtaatagattgatcatttaagttattttgatcacacataagtactttaagtttg 40980783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 1996278 - 1996218
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||||    
T  1996278 tttacaaacttataggacttatgtgtgaccaaaataacttaaaggactaatctattacaaa 1996218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 251
Target Start/End: Complemental strand, 20181513 - 20181404
Alignment:
Q  141 aaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaat 239  Q
    ||||||||||||| || |||||| |||| ||||| ||||  ||||||||||| ||||||| | ||||||||||||| |||| ||| ||||||||||||      
T  20181513 aaatgatgatgtgacagaaggacaaaattgaaaacattt--acaaacttaaatgacttatatttgaccaaaataacataaatgatcaatctattacaacc 20181416  T
Q  240 atcaaatttaaa 251  Q
     |||||||||||    
T  20181415 ctcaaatttaaa 20181404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 25456275 - 25456347
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||| |||||||||||| |||| |  ||||||| ||||||||||| |||||| |||||||||||    
T  25456275 gtcctttaagttttaggtttgtaacatattggtccttaagttattttgatcacacataagtcctttaagtttg 25456347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 4943100 - 4943178
Alignment:
Q  179 tttacaaacttaaaaga-cttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  ||| ||||| ||| |||| ||||| ||||||||    
T  4943100 tttacaaacttaaaagaacttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaaacttaaagga 4943178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 17400887 - 17400812
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||| ||||||||| |||| |  |||||||| ||||||||||| |||||| |||||||||||    
T  17400887 aagtcctttaagtttgagatttgtaacatattggtcatttaagttattttgatcacacataagtcctttaagtttg 17400812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 35813578 - 35813491
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||||||||||| |||||||||||||| |||  |||||||||| ||||| ||| | ||||||  |||||| ||||||| ||||||||    
T  35813578 aagtcctttaagtgtgaggtttgtaacagatttgtttttaagttattttgctcatacataagtcatttaagattgtaaatgttttcaa 35813491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 7209924 - 7209882
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  7209924 tttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 7209882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 14604137 - 14604072
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||| |||||||||||||||||||||||||   ||| |||||||||||||  |||||||||||    
T  14604137 caaacttaaaggacttatgtgtgaccaaaataactt---gatcaatctattacaaacctcaaatttaaa 14604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 23661951 - 23661881
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||| ||||||||||| ||||||||||||| |||||| ||||| |||||||  ||||||||||||    
T  23661951 caaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 23796619 - 23796689
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||| ||||||||||| ||||||||||||| |||||| ||||| |||||||  ||||||||||||    
T  23796619 caaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 1996141 - 1996214
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| ||||| ||||| |||| | |||||||||||    
T  1996141 gtcctttaagtttgagatttgtaacagattgatattttaagttattttggtcacatataaatcctttaagtttg 1996214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 4943226 - 4943299
Alignment:
Q  183 caaacttaaaaga-cttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||| |||||||||||||||||||||||||| ||  ||||||| |||||  ||||||||||||||    
T  4943226 caaacttaaaagaacttatgtgtgaccaaaataacttaaatgaccaatctatcacaaacctcaaatttaaagga 4943299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 16327256 - 16327158
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagg 253  Q
    |||||||||||||| |||||  |||  ||||||||||| ||||||||||| |||||||||||||||| ||  ||||| |||||||  ||||| |||||||    
T  16327256 cataaggactaaattgaaaacgttt--acaaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaagg 16327159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 17400836 - 17400724
Alignment:
Q  14 atcaaacagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgat--cacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||| ||| |||||||||||||||||| ||||||||| |||| |  | |||||||||||| |  |||| |||||| |||||| |||||||||||||||||    
T  17400836 atcacacataagtcctttaagtttgagttttgtaacagattggtcctgtaagttgttttggtcacacacataagtcctttaaatttgtaaacgttttcaa 17400737  T
Q  111 cttaatcattcta 123  Q
     ||| || |||||    
T  17400736 tttagtccttcta 17400724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 251
Target Start/End: Original strand, 35461637 - 35461710
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||||| |||| |||||| ||||||||||||| ||| ||||| |||||||| ||||| |||||    
T  35461637 tttacaaacttaaaagagttatttgtgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaa 35461710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 10827179 - 10827143
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactta 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  10827179 caaacttaaaagacttatgtgtgaccaaaataactta 10827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 12712480 - 12712424
Alignment:
Q  195 acttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||| |||||||||||||| || ||||||||||||| |||||| |||||    
T  12712480 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 12712424 - 12712480
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagt 85  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||| ||||||    
T  12712424 tttaagtttgatgtttgtaatagattgatttttaagttattttgatcacacataagt 12712480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 12773744 - 12773688
Alignment:
Q  195 acttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||| |||||||||||||| || ||||||||||||| |||||| |||||    
T  12773744 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12773688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 12773688 - 12773744
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagt 85  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||||||||| ||||||    
T  12773688 tttaagtttgatgtttgtaatagattgatttttaagttattttgatcacacataagt 12773744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 17400601 - 17400689
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||| |||||||||||  |||||||||||||| |  |||||||| |||||||| || |||||| ||||||| ||| ||||||||||||    
T  17400601 aagtcttttaagtttgaaatttgtaacaaattggtcctttaagttcttttgatctcacataagtcctttaaggttgcaaacgttttcaa 17400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 23661936 - 23662019
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||||||||||||||  ||||| ||| ||||||||| ||||| ||||| ||||| ||||||  |||||||||||||| |||||    
T  23661936 aagtcctttaagtttgatatttgtgacagattgatttt-aagttattttggtcacacataagtcttttaagtttgtaaaagtttt 23662019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 23796634 - 23796551
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||||||||||||||||  ||||| ||| ||||||||| ||||| ||||| ||||| ||||||  |||||||||||||| |||||    
T  23796634 aagtcctttaagtttgatatttgtgacagattgatttt-aagttattttggtcacacataagtcttttaagtttgtaaaagtttt 23796551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 35461701 - 35461773
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||||| |||||||||||||||||||||||||||| ||  |||||||||||||  ||||| ||||||||    
T  35461701 caaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagga 35461773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 36760780 - 36760841
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||||||| |||||| |||  ||||||| ||||||||||||||||||| ||||||||||||    
T  36760780 aaggactaaattgaaaatgttt--acaaactaaaaagacttatgtgtgaccgaaataacttaaa 36760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 38680702 - 38680630
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| |||||||| ||||||||||||||||||||||||| | | |||||||||||||  ||||| ||||||||    
T  38680702 caaaattaaaagatttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaaacttaaagga 38680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 40980783 - 40980711
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||  |||||||||||| |||||||||||||| ||| |||||||||||||  ||||| ||||||||    
T  40980783 caaacttaaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 40980711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 16327364 - 16327436
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaaggaat 256  Q
    |||||||||| |||||||||||  | ||||||||||||| |||||||||||||||||  ||||| ||||||||||    
T  16327364 caaacttaaaggacttatgtgt--ctaaaataacttaaatgattaatctattacaaacctcaaacttaaaggaat 16327436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 222
Target Start/End: Original strand, 20928081 - 20928120
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20928081 caaacttaaaggacttatgtgtgaccaaaataacttaaag 20928120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 97
Target Start/End: Complemental strand, 23662215 - 23662144
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||| |||||| |  |||||||| ||||| | ||| ||||||||||||||||||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagttctttaagtttg 23662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 35461593 - 35461529
Alignment:
Q  156 ataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||||||||   ||||||||||||||| ||||||| ||||| |||||||| ||||||    
T  35461593 ataaggactaaatcgaaaac--ttttacaaacttaaaggacttatttgtgatcaaaataatttaaag 35461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 12713152 - 12713222
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||| |||||||||||||| ||||||||||||| || ||| |||||| |||  ||||||||||||    
T  12713152 caaacttaaaggacttatgtgtgacaaaaataacttaaatgactaacctattataaagctcaaatttaaag 12713222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 12774416 - 12774486
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaag 252  Q
    |||||||||| |||||||||||||| ||||||||||||| || ||| |||||| |||  ||||||||||||    
T  12774416 caaacttaaaggacttatgtgtgacaaaaataacttaaatgactaacctattataaagctcaaatttaaag 12774486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 28022228 - 28022130
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcatt 120  Q
    |||| ||||||||||||||||| ||| ||||||||  |||||||| ||||| ||||  |||||  |||||| ||||||||| ||||| | |||||||||    
T  28022228 aagttctttaagtttgaggtttataataaattgatcatttaagttattttggtcacgcataagccctttaaatttgtaaacattttcgatttaatcatt 28022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 32361162 - 32361240
Alignment:
Q  20 cagaagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||| ||||| |||||||| | ||||||  |||||||| ||||| ||||| ||||||| ||||||||||    
T  32361162 cagaagtcctttaaatttgaagtttgtaatagattgatcatttaagttattttggtcacacataagttatttaagtttg 32361240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 35188036 - 35187994
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  35188036 tttacaaacttaaatgatttatgtgtgaccaaaataacttaaa 35187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 7210336 - 7210214
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctat 124  Q
    ||||||||||||||||||||| ||||| ||      |||||| ||||| |  || ||||||  |||||||||||||||||||| || ||| ||||||| |    
T  7210336 gtcctttaagtttgaggtttgcaacaactt------taagttattttggttgcacataagtcatttaagtttgtaaacgttttaaatttagtcattctgt 7210243  T
Q  125 taaccaaacattactaaaatgatgatgtg 153  Q
    |||  |||| |||| ||||| ||||||||    
T  7210242 taattaaacgttacaaaaataatgatgtg 7210214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 20927917 - 20927848
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||| ||||| ||||||||||| || ||||||||||||| ||| |||||||||||||| ||||| |||||    
T  20927917 caaatttaaaggacttatgtgtaactaaaataacttaaatgatcaatctattacaaatctcaaacttaaa 20927848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 25456609 - 25456540
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||| |||| | |||||||| ||||  ||||| |||| | |||||||||||    
T  25456609 ctttaagtttgaggtttgtaacagattggtctttaagttattttagtcacacataaatactttaagtttg 25456540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 35461716 - 35461615
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||| ||||| |||||| ||||||||| ||||||  |||||||| ||||  |||||||||| |  |||||||||||||||| |||||  ||| ||||||    
T  35461716 aagtcatttaattttgagatttgtaacagattgatcatttaagttatttttgtcacaaataactcttttaagtttgtaaacgctttcatattagtcattc 35461617  T
Q  122 ta 123  Q
    ||    
T  35461616 ta 35461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 1649524 - 1649473
Alignment:
Q  26 tcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcaca 78  Q
    |||||||||||| |||||||||||| ||||| ||||||||| |||||||||||    
T  1649524 tcctttaagtttaaggtttgtaacatattga-ttttaagttattttgatcaca 1649473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 1996214 - 1996142
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| || |||| ||||||||||||||||| ||| || ||||| |||||||| ||||| ||||||||    
T  1996214 caaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatctgttacaaatctcaaacttaaagga 1996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 5746308 - 5746368
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataactt-aaagattaatctattacaaa 238  Q
    |||||||||||||| ||||||||| |||||||||||| || |||||||||| | |||||||    
T  5746308 tttacaaacttaaatgacttatgtatgaccaaaataatttaaaagattaatttgttacaaa 5746368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 10827164 - 10827243
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacg 103  Q
    ||||| |||||||||||| ||||||||| |||| | |||||||| ||||| |||| | | ||| |||||||||||||||||    
T  10827164 aagtcttttaagtttgagttttgtaacagattggtctttaagttattttggtcac-atttagtcctttaagtttgtaaacg 10827243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 16327170 - 16327114
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaa 238  Q
    |||||||||| |||||||||| ||| ||||||||||||| ||| |||||||||||||    
T  16327170 caaacttaaaggacttatgtgcgactaaaataacttaaacgatcaatctattacaaa 16327114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 17400616 - 17400577
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaaga 223  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  17400616 caaacttaaaagacttatgtgtga-caaaataacttaaaga 17400577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 17400812 - 17400884
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| ||||||||||||| |||||||||||||| ||  ||| | |||||||| ||||| ||||||||    
T  17400812 caaacttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaagga 17400884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 35461508 - 35461436
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||| | |||||||||||||||||||||||||||| ||  ||| |||||||||  ||||| ||||||||    
T  35461508 caaacttacaggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaagga 35461436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 35812181 - 35812253
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||| ||||||||||||| ||||| ||  |||||||||||||  | ||||||||||||    
T  35812181 caaacttaaatgacttatgcgtgaccaaaataatttaaaggaccaatctattacaaactttaaatttaaagga 35812253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 7210266 - 7210309
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaag 222  Q
    |||||||||||||| ||||||||||  |||||||||||||||||    
T  7210266 tttacaaacttaaatgacttatgtgcaaccaaaataacttaaag 7210309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 10827287 - 10827379
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||||||||||  |||  ||||||||||| ||||| | |||||||||||||| ||||| ||| ||||| |||||||  ||||| |||||    
T  10827287 aaggactaaatcgaaaacgttt--acaaacttaaaggacttgtttgtgaccaaaataatttaaaggatcaatctgttacaaaactcaaacttaaa 10827379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 252
Target Start/End: Complemental strand, 36759761 - 36759665
Alignment:
Q  155 cataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaag-attaatctattacaaatatcaaatttaaag 252  Q
    ||||| |||||||| ||||| ||||  ||||||||||| |||||||  ||||||||||||| |||||| | | |||| ||||||| |||||| ||||||    
T  36759761 cataatgactaaattgaaaacattt--acaaacttaaaggacttataagtgaccaaaataatttaaagaacttatctgttacaaacatcaaacttaaag 36759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 40980994 - 40980844
Alignment:
Q  30 ttaagtttgaggttt-gtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaa 127  Q
    ||||||||||| ||| |||| |||||||| ||||||||| |||| || ||| |||||||||| || || ||| || ||||||| ||| || || | |||     
T  40980994 ttaagtttgagtttttgtaataaattgatcttttaagttatttttataacacataagttcttaaactt-gtacacattttcaatttagtctttatgttag 40980896  T
Q  128 ccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatattt 179  Q
     || ||||||| |||| |||||||||||| || ||||||||| ||| |||||    
T  40980895 tcacacattacaaaaacgatgatgtggcaaaatgactaaatcaaaagtattt 40980844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 14604202 - 14604125
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||| ||||| ||||||| ||||||||||||||| ||||  ||| ||||| |||||||  ||||| ||||||||    
T  14604202 tttacaaatttaaaggacttatatgtgaccaaaataacataaaatgatcaatctgttacaaacctcaaacttaaagga 14604125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 19550101 - 19550171
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||| | ||| ||||||  ||||||||||    
T  19550101 ctttaagtttgaggtttgtaatagattgattctttaagttattttggtgacacataagtcttttaagtttg 19550171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 23661881 - 23661951
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||| ||||| |||||||||| |||||| ||||||||| ||||| | ||| |||||| |||||||||||    
T  23661881 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23661951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 23796689 - 23796619
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||| ||||| |||||||||| |||||| ||||||||| ||||| | ||| |||||| |||||||||||    
T  23796689 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 28022097 - 28022191
Alignment:
Q  124 ttaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    |||| |||||||||| |||| ||| | |||||| || || |||||||||||| |||  ||||| ||||| | |||||| |||||||||||||||||||    
T  28022097 ttaatcaaacattacaaaaacgataa-gtggcaaaatgattaaatcgaaaatgttt--acaaatttaaagggcttatgcgtgaccaaaataacttaaa 28022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 35813424 - 35813386
Alignment:
Q  179 tttacaaacttaaaagacttatgtgtgaccaaaataact 217  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  35813424 tttacaaacttaaaggacttatgtgtgactaaaataact 35813386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 37032963 - 37033001
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  37032963 caaacttgaaggacttatgtgtgaccaaaataacttaaa 37033001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 37643074 - 37642988
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||  |||| |||||||||  |||||   ||||| || ||||| |||||||||||| ||||||||||||||||| ||||    
T  37643074 aagtcctttaacattgatgtttgtaacggattgaccctttaaattattttggtcacaaataagtcctttaagtttgtaaacggtttc 37642988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 1649406 - 1649341
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaa 92  Q
    ||||||||||||||||||||||| ||||||   ||||||| ||||||||||  |||||| ||||||    
T  1649406 ctttaagtttgaggtttgtaacagattgatccattaagttattttgatcactcataagtcctttaa 1649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 4943235 - 4943166
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||| ||||||||| |||| |  ||||| || ||||||||||| |||||| |||||||||||    
T  4943235 tttaagtttgagatttgtaacatattggtactttaaattattttgatcacacataagtcctttaagtttg 4943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 5746152 - 5746237
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgtttt 107  Q
    |||| |||||| |||||||||| ||||| |||| |  |||||||| ||||| | | | |||||| |||||||||||||||||||||    
T  5746152 aagttctttaaatttgaggtttataacagattggtcatttaagttattttggtaaaacataagtcctttaagtttgtaaacgtttt 5746237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 6588148 - 6588073
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaac 102  Q
    ||||||||| |||||||||||||||| ||||| ||||||||| ||||| || || ||||  | |||||||||||||||    
T  6588148 gtcctttaaatttgaggtttgtaacatattga-ttttaagttattttggtcgcacataa-ctatttaagtttgtaaac 6588073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 25456347 - 25456310
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaa 220  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  25456347 caaacttaaaggacttatgtgtgatcaaaataacttaa 25456310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 25456540 - 25456609
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||  | ||||||||||| |||||||||||||||  ||||| |||||||  ||||| ||||||    
T  25456540 caaacttaaagtatttatgtgtgactaaaataacttaaagaccaatctgttacaaacctcaaacttaaag 25456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 35461435 - 35461508
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||| | |||| |  |||||||| ||||| ||||| |||||| || ||||||||    
T  35461435 gtcctttaagtttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtcctgtaagtttg 35461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 13170001 - 13170053
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaat 81  Q
    |||||||||||||||||||| |||||| | |||||||| ||||| ||| ||||    
T  13170001 tttaagtttgaggtttgtaataaattggtctttaagttattttggtcataaat 13170053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 33491583 - 33491531
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattaca 236  Q
    ||||||||| ||||||||||  | |||||||| |||||||| |||||||||||    
T  33491583 aaacttaaaggacttatgtgcaatcaaaataatttaaagatcaatctattaca 33491531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 1e-19; HSPs: 7)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 161605 - 161682
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||| |||||||||||||||||||||||    
T  161605 ttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaagga 161682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 254
Target Start/End: Complemental strand, 161685 - 161464
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc 121  Q
    ||||||||||| |||||  ||||||||| |||| |  |||| ||| ||||| ||||| |||||| ||||||||||||||| |||||||| ||| ||||||    
T  161685 aagtcctttaaatttgatatttgtaacagattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaatttagtcattc 161586  T
Q  122 tattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    | ||| ||          |||| |||||||| ||| |||||||| || ||||   ||| |||||||||||| |||||||||||||| ||||||| |||||    
T  161585 tgttagcc----------aaaaggatgatgtcgcaaaaggactacattgaaa--ttttgtacaaacttaaaggacttatgtgtgacaaaaataagttaaa 161498  T
Q  222 -gattaatctattacaaatatcaaatttaaagga 254  Q
     ||  ||||| |||||||| ||||| ||||||||    
T  161497 ggaccaatctgttacaaatctcaaacttaaagga 161464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 161670 - 161742
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||| ||||| |||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||    
T  161670 caaatttaaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaagga 161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 161403 - 161476
Alignment:
Q  25 gtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||||||||||||| |||| |  ||||| || ||||| ||||| |||||| |||||||||||    
T  161403 gtcctttaagtttgaggtttgtaacagattggtcctttaacttattttggtcacacataagtcctttaagtttg 161476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 161476 - 161404
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||||||||||| ||||| ||  ||||| |||||||  ||||| ||||||||    
T  161476 caaacttaaaggacttatgtgtgaccaaaataagttaaaggaccaatctgttacaaacctcaaacttaaagga 161404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 161744 - 161670
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| |||||||| | ||||||  |||||||| ||||| ||||| |||||| |||||| ||||    
T  161744 agtcctttaagtttgatgtttgtaatagattgatcctttaagttattttggtcacacataagtcctttaaatttg 161670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 161461 - 161538
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgta 99  Q
    |||||||||||||||||| ||||||||| |||| |  ||||| || ||||  ||||| |||||| |||||||||||||    
T  161461 aagtcctttaagtttgagatttgtaacagattggtcctttaacttatttttgtcacacataagtcctttaagtttgta 161538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 21678 - 21763
Alignment:
Q  134 attactaaaatgatgatgtggcataaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
    ||||| |||| |||||||||||| ||||||||||| |||| |  ||||||||||||||| || |||||||||||||||||||||||||    
T  21678 attacaaaaaagatgatgtggcagaaggactaaattgaaatt--ttttacaaacttaaaggatttatgtgtgaccaaaataacttaaa 21763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 21675 - 21580
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||||||||||  |||  ||||| ||||||||||||||||||||| |||||| ||||| ||||| ||| |||||||| ||||| ||||||||    
T  21675 aaggactaaatcgaaaacgttt--acaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaagga 21580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 21518 - 21592
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    ||||||||||||||||||||||||| | ||||||  |||||||| |||| |||||| |||||| |||||||||||    
T  21518 agtcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 21592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 21786 - 21854
Alignment:
Q  184 aaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaa 250  Q
    |||||||||||||||||||||||| |||||||||||||  ||  |||||||||||||  ||||||||||    
T  21786 aaacttaaaagacttatgtgtgacaaaaataacttaaaaggaccaatctattacaaacctcaaatttaa 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 21592 - 21520
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||  ||||||||||||| ||| |||||||||||||  ||||| ||||||||    
T  21592 caaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 21520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 21800 - 21721
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttgtaaa 101  Q
    ||||| ||||||||| ||||||| || | |||||| ||||||||| ||||| ||||| |||| | |||||||||||||||    
T  21800 aagtcttttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaa 21721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 2490 - 2635
Alignment:
Q  74 tcacaaataagttctttaagtttgtaaacgttttcaacttaatcattctattaaccaaacattactaaaatgatgatgtggcataaggactaaatcgaaa 173  Q
    ||||| ||||||||||||||||||||||||||| | |  || || |||||||||||||||||||| |||| |||||| ||| |||| || ||||| ||||    
T  2490 tcacacataagttctttaagtttgtaaacgtttcctatctagtccttctattaaccaaacattacaaaaacgatgatatggtataacgaataaattgaaa 2589  T
Q  174 atatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 221  Q
      |  ||||||||||||||  |||||||||| |  ||| |||||||||    
T  2590 --acgtttacaaacttaaagaacttatgtgttataaaagtaacttaaa 2635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 2667 - 2584
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    |||||||||||||||||| ||||| |||| | ||||||||  ||| || ||| |||||||||||||||||||||||||||||||    
T  2667 cctttaagtttgaggtttataacagattgttatttaagttacttttataacacataagttctttaagtttgtaaacgttttcaa 2584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 1135 - 1209
Alignment:
Q  178 ttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaa 251  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||  |||||||||||||| |||||    
T  1135 ttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaa 1209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 1200 - 1272
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaa-gattaatctattacaaatatcaaatttaaagga 254  Q
    |||||||||| |||||||||||||||||||||||||||| ||  ||||| |||||||  ||||| ||||||||    
T  1200 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacgtcaaacttaaagga 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 1274 - 1200
Alignment:
Q  24 agtcctttaagtttgaggtttgtaacaaattgat-ttttaagttgttttgatcacaaataagttctttaagtttg 97  Q
    |||||||||||||||| |||||||||| |||| |  |||||||| ||||| ||||| ||||||  ||||||||||    
T  1274 agtcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 1215 - 1127
Alignment:
Q  23 aagtcctttaagtttgaggtttgtaacaaattgatt-tttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaa 110  Q
    ||||| |||||||||||  ||||||||  |||| |  |||| ||| ||||| ||||| |||||| ||||||||||||||| ||||||||    
T  1215 aagtcatttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaa 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 12110 - 12191
Alignment:
Q  27 cctttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttc 108  Q
    |||||||||||||| |||||||||||||| |  ||||||| ||||  ||||| | |||| |||||||||||||||| |||||    
T  12110 cctttaagtttgagatttgtaacaaattggtccttaagttatttttgtcacacacaagtcctttaagtttgtaaacattttc 12191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 253
Target Start/End: Complemental strand, 12203 - 12110
Alignment:
Q  158 aaggactaaatcgaaaatatttttacaaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaagg 253  Q
    ||||||| |||||||||| |||  ||||||||||| ||||| |||||||| |||||||||||| ||  ||| | |||||||| ||||| |||||||    
T  12203 aaggactcaatcgaaaatgttt--acaaacttaaaggacttgtgtgtgacaaaaataacttaaggaccaatttgttacaaatctcaaacttaaagg 12110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 12318 - 12212
Alignment:
Q  30 ttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagttctttaagtttgtaaacgttttcaacttaatcattc-tattaac 128  Q
    ||||||||||||||||||||| |||| | ||||| || ||||||||||  |||| |  ||||| |||||||| |||||||| ||| || ||| | |||||    
T  12318 ttaagtttgaggtttgtaacagattggtctttaacttattttgatcac--ataaatcttttaaatttgtaaatgttttcaatttagtccttcttgttaac 12221  T
Q  129 caaacatta 137  Q
    |||||||||    
T  12220 caaacatta 12212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 12377 - 12322
Alignment:
Q  29 tttaagtttgaggtttgtaacaaattgatttttaagttgttttgatcacaaataagt 85  Q
    |||||||||||||||||||| | ||||| ||||||||| ||||||||||| ||||||    
T  12377 tttaagtttgaggtttgtaatagattga-ttttaagttattttgatcacatataagt 12322  T

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Target: scaffold0002; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 12310 - 12377
Alignment:
Q  183 caaacttaaaagacttatgtgtgaccaaaataacttaaagattaatctattacaaatatcaaatttaaa 251  Q
    |||||||||  ||||||| ||||| |||||||||||||| || |||||||||||||  ||||| |||||    
T  12310 caaacttaattgacttatatgtgatcaaaataacttaaa-atcaatctattacaaacctcaaacttaaa 12377  T

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Target: scaffold0578 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 2445 - 2517
Alignment:
Q  182 acaaacttaaaagacttatgtgtgaccaaaataacttaaa--gattaatctattacaaatatcaaatttaaag 252  Q
    ||||||||||| ||||||||||||| ||||||||||||||  ||  |||||||||||||  ||||| ||||||    
T  2445 acaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 2517  T

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Target: scaffold0578; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 2517 - 2445
Alignment:
Q  28 ctttaagtttgaggtttgtaacaaattgat--ttttaagttgttttgatcacaaataagttctttaagtttgt 98  Q
    ||||||||||||||||||||| | |||| |  ||||||||| ||||| ||||| ||||||  |||||||||||    
T  2517 ctttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtcatttaagtttgt 2445  T

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