View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17061_low_44 (Length: 256)
Name: NF17061_low_44
Description: NF17061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17061_low_44 |
 |  |
|
| [»] scaffold0047 (1 HSPs) |
 |  |  |
|
| [»] scaffold0170 (1 HSPs) |
 |  |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
| [»] scaffold0015 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 32 - 245
Target Start/End: Complemental strand, 30833768 - 30833556
Alignment:
| Q |
32 |
ttattttttcatgatgttgtgtttttcatccttttcaccgaaaaaagtctttaacttaataaccnnnnnnnnn-ctcctctgcaagattgttgtctttct |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
30833768 |
ttattttttcatgatgttgtgtttttcatccttttcaccgaaaaaagtctttaacttaataaccctttttttttctcctatgcaagattgttgtctttct |
30833669 |
T |
 |
| Q |
131 |
tggttgccatttgattagttactaagattatgtatattaattgtgggtttattatgcttccaaagcacatgtttctatcaattaaatattgaattcctct |
230 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30833668 |
tggttgccatttgattagttactaggattatgtatattaattgtgggtttattatgcttctaaagcaca--tttctatcaattaaatattgaattcctct |
30833571 |
T |
 |
| Q |
231 |
tctgttatgaaacaa |
245 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
30833570 |
tctgttatgaaacaa |
30833556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6389942 - 6389909
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
6389942 |
aaagtgcagggaccaatgacacatttaaacctta |
6389909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33706184 - 33706217
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
33706184 |
aaagtgcagggaccaatgacacatttaaacctta |
33706217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3199337 - 3199305
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
3199337 |
aaagtgcagggaccaatgacacatttaaacctt |
3199305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21003155 - 21003187
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
21003155 |
aaagtgcagggaccaatgacacatttaaacctt |
21003187 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 61965 - 61896
Alignment:
| Q |
121 |
ttgtctttcttggttgccatttgattagttactaagattatgtatattaattgtgggtttattatgcttc |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||| |
|
|
| T |
61965 |
ttgtctttcttggttgccatttgattagttactaggaatatgcatattaattgtgggtttattatgcttc |
61896 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4528999 - 4529038
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaaccttatttttt |
40 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4528999 |
aaagtgcagggaccaatgacacatttaaaccttatttttt |
4529038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32923754 - 32923721
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
32923754 |
aaagtgcagggaccaatgacacatttaaacctta |
32923721 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42216639 - 42216672
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
42216639 |
aaagtgcagggaccaatgacacatttaaacctta |
42216672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17696640 - 17696608
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
17696640 |
aaagtgcagggaccaatgacacatttaaacctt |
17696608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 34181515 - 34181547
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
34181515 |
aaagtgcagggaccaatgacacatttaaacctt |
34181547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31657771 - 31657807
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaaccttattt |
37 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
31657771 |
aaagtgcagggaccaatgacacatttaaaccttattt |
31657807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6626550 - 6626589
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaaccttatttttt |
40 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
6626550 |
aaagtgcagggaccaatgacacatttaaaccttaattttt |
6626589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1795470 - 1795437
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
1795470 |
aaagtgcagggaccaatgacacatttaaacctta |
1795437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6607666 - 6607634
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
6607666 |
aaagtgcagggaccaatgacacatttaaacctt |
6607634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1614292 - 1614330
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaaccttattttt |
39 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
1614292 |
aaagtgcagggaccaatgacacatttaaaccttaatttt |
1614330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 322029 - 322062
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
322029 |
aaagtgcagggaccaatgacacatttaaacctta |
322062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11021630 - 11021663
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
11021630 |
aaagtgcagggaccaatgacacatttaaacctta |
11021663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 47690322 - 47690289
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
47690322 |
aaagtgcagggaccaatgacacatttaaacctta |
47690289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8445040 - 8445072
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
8445040 |
aaagtgcagggaccaatgacacatttaaacctt |
8445072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15168943 - 15168911
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
15168943 |
aaagtgcagggaccaatgacacatttaaacctt |
15168911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51892693 - 51892661
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
51892693 |
aaagtgcagggaccaatgacacatttaaacctt |
51892661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 3017559 - 3017597
Alignment:
| Q |
5 |
tgcagggaccaatgacacatctaaaccttattttttcat |
43 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
3017559 |
tgcagggaccaatgacacatttaaacctttttttttcat |
3017597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 34682309 - 34682277
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
34682309 |
aaagtgcagggaccaatgacacatttaaacctt |
34682277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 51437028 - 51436996
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
51437028 |
aaagtgcagggaccaatgacacatttaaacctt |
51436996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.00000009; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5907290 - 5907257
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
5907290 |
aaagtgcagggaccaatgacacatttaaacctta |
5907257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32792393 - 32792360
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
32792393 |
aaagtgcagggaccaatgacacatttaaacctta |
32792360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39412502 - 39412535
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
39412502 |
aaagtgcagggaccaatgacacatttaaacctta |
39412535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18673940 - 18673904
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaaccttattt |
37 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
18673940 |
aaagtgtagggaccaatgacacatttaaaccttattt |
18673904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23910325 - 23910293
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
23910325 |
aaagtgcagggaccaatgacacatttaaacctt |
23910293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27858418 - 27858386
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
27858418 |
aaagtgcagggaccaatgacacatttaaacctt |
27858386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 38790272 - 38790304
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
38790272 |
aaagtgcagggaccaatgacacatttaaacctt |
38790304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.00000009; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5904843 - 5904810
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
5904843 |
aaagtgcagggaccaatgacacatttaaacctta |
5904810 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 38717713 - 38717746
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctta |
34 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
38717713 |
aaagtgcagggaccaatgacacatttaaacctta |
38717746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 36465966 - 36465934
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
36465966 |
aaagtgcagggaccaatgacacatttaaacctt |
36465934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39759303 - 39759335
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
39759303 |
aaagtgcagggaccaatgacacatttaaacctt |
39759335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 47672030 - 47671998
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
47672030 |
aaagtgcagggaccaatgacacatttaaacctt |
47671998 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5838 - 5870
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
5838 |
aaagtgcagggaccaatgacacatttaaacctt |
5870 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35722 - 35754
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
35722 |
aaagtgcagggaccaatgacacatttaaacctt |
35754 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49747 - 49715
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
49747 |
aaagtgcagggaccaatgacacatttaaacctt |
49715 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000003; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2098648 - 2098680
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
2098648 |
aaagtgcagggaccaatgacacatttaaacctt |
2098680 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4902653 - 4902621
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
4902653 |
aaagtgcagggaccaatgacacatttaaacctt |
4902621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4902981 - 4903013
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
4902981 |
aaagtgcagggaccaatgacacatttaaacctt |
4903013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4950051 - 4950019
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
4950051 |
aaagtgcagggaccaatgacacatttaaacctt |
4950019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16265615 - 16265583
Alignment:
| Q |
1 |
aaagtgcagggaccaatgacacatctaaacctt |
33 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |
|
|
| T |
16265615 |
aaagtgcagggaccaatgacacatttaaacctt |
16265583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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