View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17063_high_20 (Length: 506)

Name: NF17063_high_20
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17063_high_20
NF17063_high_20
[»] chr7 (45 HSPs)
chr7 (304-487)||(45867229-45867415)
chr7 (104-166)||(8805852-8805914)
chr7 (104-166)||(8949400-8949462)
chr7 (104-166)||(45055430-45055492)
chr7 (104-166)||(46738408-46738470)
chr7 (105-166)||(11338037-11338098)
chr7 (104-166)||(7149399-7149461)
chr7 (104-166)||(16860978-16861040)
chr7 (104-166)||(31813874-31813936)
chr7 (104-166)||(42391404-42391466)
chr7 (104-166)||(45867589-45867651)
chr7 (104-166)||(49114415-49114477)
chr7 (105-166)||(12423990-12424051)
chr7 (105-166)||(20121350-20121411)
chr7 (105-166)||(24331487-24331548)
chr7 (105-166)||(41857249-41857310)
chr7 (104-165)||(41922391-41922452)
chr7 (105-166)||(44457892-44457953)
chr7 (110-166)||(17173197-17173253)
chr7 (103-166)||(19104416-19104479)
chr7 (104-166)||(34287660-34287723)
chr7 (104-166)||(2699761-2699823)
chr7 (104-166)||(31115942-31116004)
chr7 (104-166)||(43575206-43575268)
chr7 (104-166)||(49023722-49023784)
chr7 (105-166)||(41749725-41749786)
chr7 (105-166)||(47221852-47221913)
chr7 (104-166)||(7173075-7173137)
chr7 (115-161)||(21455667-21455713)
chr7 (104-166)||(31283262-31283324)
chr7 (104-166)||(38495058-38495120)
chr7 (104-166)||(43268073-43268135)
chr7 (104-166)||(45062206-45062268)
chr7 (110-166)||(23036797-23036853)
chr7 (115-158)||(21627088-21627131)
chr7 (104-166)||(32165329-32165391)
chr7 (104-162)||(46426805-46426863)
chr7 (115-166)||(11682077-11682128)
chr7 (103-166)||(19124974-19125037)
chr7 (104-163)||(48766002-48766061)
chr7 (104-166)||(21733176-21733238)
chr7 (104-166)||(32064498-32064560)
chr7 (117-162)||(27551996-27552041)
chr7 (122-166)||(14792945-14792989)
chr7 (122-166)||(15239935-15239979)
[»] chr5 (42 HSPs)
chr5 (104-166)||(13577407-13577469)
chr5 (103-166)||(14871842-14871905)
chr5 (104-166)||(3279332-3279394)
chr5 (104-166)||(13697462-13697524)
chr5 (104-166)||(16736911-16736973)
chr5 (104-166)||(32772135-32772197)
chr5 (104-166)||(40952176-40952238)
chr5 (103-166)||(18707378-18707441)
chr5 (104-166)||(1099036-1099098)
chr5 (104-166)||(2467203-2467265)
chr5 (104-166)||(7601737-7601799)
chr5 (104-166)||(33429641-33429703)
chr5 (104-161)||(2426342-2426399)
chr5 (104-165)||(2961038-2961099)
chr5 (104-165)||(2969506-2969567)
chr5 (105-166)||(39589721-39589782)
chr5 (115-166)||(31618322-31618373)
chr5 (104-166)||(2492808-2492869)
chr5 (104-166)||(7610407-7610469)
chr5 (104-166)||(12854719-12854781)
chr5 (104-166)||(24858511-24858573)
chr5 (104-166)||(33381537-33381599)
chr5 (105-165)||(13455785-13455845)
chr5 (104-166)||(3168201-3168263)
chr5 (104-166)||(3974357-3974419)
chr5 (104-162)||(15858118-15858176)
chr5 (104-166)||(19984368-19984430)
chr5 (104-158)||(37943641-37943695)
chr5 (105-166)||(42610889-42610950)
chr5 (110-166)||(6540135-6540191)
chr5 (110-166)||(14729596-14729652)
chr5 (115-166)||(19131025-19131076)
chr5 (104-166)||(1643683-1643745)
chr5 (104-166)||(5239386-5239448)
chr5 (104-166)||(17539522-17539584)
chr5 (104-166)||(23226752-23226814)
chr5 (104-166)||(37092323-37092385)
chr5 (110-166)||(22621197-22621253)
chr5 (104-162)||(8357177-8357235)
chr5 (110-166)||(30129582-30129637)
chr5 (131-166)||(12875838-12875873)
chr5 (231-267)||(8874351-8874387)
[»] chr2 (43 HSPs)
chr2 (104-164)||(42030683-42030743)
chr2 (104-166)||(1270253-1270315)
chr2 (104-166)||(9027133-9027195)
chr2 (104-166)||(11724725-11724787)
chr2 (104-166)||(17549213-17549275)
chr2 (104-166)||(23926535-23926597)
chr2 (104-166)||(26499519-26499581)
chr2 (104-166)||(29175068-29175130)
chr2 (104-166)||(30488188-30488250)
chr2 (104-165)||(20663818-20663879)
chr2 (104-166)||(1650647-1650709)
chr2 (19-88)||(2782767-2782837)
chr2 (104-166)||(9912056-9912118)
chr2 (104-166)||(10192229-10192291)
chr2 (104-166)||(16350700-16350762)
chr2 (104-166)||(29421837-29421899)
chr2 (104-166)||(44490448-44490510)
chr2 (104-165)||(31556891-31556952)
chr2 (110-166)||(341420-341476)
chr2 (110-166)||(22196073-22196129)
chr2 (115-166)||(22899127-22899178)
chr2 (115-166)||(35412032-35412083)
chr2 (104-166)||(1479171-1479233)
chr2 (116-166)||(3888979-3889029)
chr2 (104-166)||(33274541-33274603)
chr2 (104-166)||(42950663-42950725)
chr2 (104-166)||(10714152-10714214)
chr2 (104-166)||(13421182-13421244)
chr2 (108-166)||(15461403-15461461)
chr2 (105-166)||(11723814-11723875)
chr2 (115-166)||(28788975-28789026)
chr2 (115-166)||(38574689-38574740)
chr2 (128-166)||(3322161-3322199)
chr2 (104-162)||(11122788-11122846)
chr2 (128-166)||(22486164-22486202)
chr2 (110-162)||(19079371-19079423)
chr2 (115-166)||(2450243-2450294)
chr2 (128-166)||(18449464-18449502)
chr2 (109-163)||(18508566-18508620)
chr2 (108-166)||(29154172-29154230)
chr2 (110-166)||(40657450-40657506)
chr2 (104-166)||(30842211-30842273)
chr2 (105-161)||(38574763-38574819)
[»] scaffold0119 (1 HSPs)
scaffold0119 (104-166)||(41387-41449)
[»] chr8 (32 HSPs)
chr8 (104-166)||(33279080-33279142)
chr8 (104-166)||(42684896-42684958)
chr8 (104-166)||(39198725-39198787)
chr8 (104-166)||(29596546-29596608)
chr8 (104-166)||(36556679-36556741)
chr8 (104-166)||(41617184-41617246)
chr8 (104-166)||(8156852-8156914)
chr8 (104-166)||(12649588-12649650)
chr8 (104-166)||(17494831-17494893)
chr8 (104-162)||(18805889-18805947)
chr8 (104-166)||(26938294-26938356)
chr8 (105-166)||(148401-148462)
chr8 (105-166)||(18929845-18929905)
chr8 (104-165)||(21660836-21660897)
chr8 (110-166)||(34198943-34198999)
chr8 (110-166)||(40277330-40277386)
chr8 (104-166)||(1235728-1235790)
chr8 (104-166)||(27712908-27712970)
chr8 (104-166)||(28828324-28828386)
chr8 (104-166)||(30253734-30253796)
chr8 (104-166)||(34632369-34632431)
chr8 (104-166)||(43497315-43497377)
chr8 (104-149)||(29726652-29726697)
chr8 (107-166)||(26187275-26187334)
chr8 (115-166)||(30464069-30464120)
chr8 (104-166)||(4968118-4968180)
chr8 (104-166)||(9887279-9887341)
chr8 (104-162)||(24419586-24419644)
chr8 (104-166)||(33527048-33527110)
chr8 (104-166)||(38229754-38229816)
chr8 (104-166)||(37727343-37727405)
chr8 (104-152)||(10925224-10925272)
[»] chr6 (26 HSPs)
chr6 (104-166)||(685061-685123)
chr6 (104-166)||(24325100-24325162)
chr6 (105-166)||(22568908-22568969)
chr6 (103-166)||(3012021-3012084)
chr6 (104-166)||(9220247-9220309)
chr6 (104-166)||(9546519-9546581)
chr6 (104-162)||(9899339-9899397)
chr6 (104-166)||(13853250-13853312)
chr6 (104-166)||(17853751-17853813)
chr6 (104-166)||(25121605-25121667)
chr6 (110-166)||(13178331-13178387)
chr6 (110-166)||(20027923-20027979)
chr6 (104-166)||(8129677-8129739)
chr6 (104-166)||(8487970-8488032)
chr6 (105-166)||(3105712-3105773)
chr6 (104-162)||(1925260-1925318)
chr6 (104-166)||(2316633-2316695)
chr6 (104-166)||(2882991-2883053)
chr6 (104-166)||(24896280-24896342)
chr6 (104-165)||(21926173-21926234)
chr6 (104-166)||(2863688-2863750)
chr6 (104-158)||(28852332-28852386)
chr6 (104-163)||(12240624-12240684)
chr6 (106-166)||(25026083-25026143)
chr6 (137-166)||(11361957-11361986)
chr6 (130-166)||(14655246-14655282)
[»] chr4 (44 HSPs)
chr4 (104-166)||(41935601-41935663)
chr4 (105-166)||(26842908-26842969)
chr4 (104-165)||(46648213-46648274)
chr4 (103-166)||(44835116-44835179)
chr4 (103-166)||(52538022-52538085)
chr4 (104-166)||(7067386-7067448)
chr4 (104-166)||(25331961-25332023)
chr4 (104-166)||(32188058-32188120)
chr4 (104-166)||(32922175-32922237)
chr4 (104-162)||(35130908-35130966)
chr4 (104-162)||(45801362-45801420)
chr4 (104-166)||(46689301-46689363)
chr4 (105-166)||(16020065-16020126)
chr4 (105-165)||(39792062-39792122)
chr4 (104-166)||(18568169-18568231)
chr4 (104-166)||(26886754-26886816)
chr4 (104-166)||(52654076-52654138)
chr4 (105-166)||(17362443-17362504)
chr4 (110-162)||(41376696-41376748)
chr4 (104-162)||(5748019-5748077)
chr4 (104-166)||(10993733-10993795)
chr4 (104-166)||(22539831-22539893)
chr4 (104-166)||(30637054-30637116)
chr4 (104-166)||(37068758-37068819)
chr4 (104-166)||(44551023-44551085)
chr4 (104-166)||(45655837-45655899)
chr4 (110-166)||(38556050-38556106)
chr4 (104-166)||(9902797-9902862)
chr4 (104-166)||(16530426-16530488)
chr4 (104-166)||(18635984-18636046)
chr4 (104-166)||(23572745-23572807)
chr4 (105-166)||(15516414-15516474)
chr4 (110-166)||(32488734-32488790)
chr4 (104-166)||(20984058-20984120)
chr4 (104-166)||(23962955-23963017)
chr4 (104-166)||(24270506-24270568)
chr4 (128-166)||(26948100-26948138)
chr4 (104-166)||(31857725-31857787)
chr4 (108-158)||(46674707-46674757)
chr4 (104-162)||(49387327-49387385)
chr4 (104-166)||(43264214-43264277)
chr4 (104-166)||(36868176-36868238)
chr4 (120-165)||(9644922-9644967)
chr4 (231-267)||(50512761-50512797)
[»] chr3 (44 HSPs)
chr3 (104-166)||(15543107-15543169)
chr3 (104-166)||(49002379-49002441)
chr3 (106-166)||(29434409-29434469)
chr3 (104-162)||(11439912-11439970)
chr3 (104-166)||(11989623-11989685)
chr3 (104-166)||(20209294-20209356)
chr3 (104-166)||(21017065-21017127)
chr3 (104-166)||(44664729-44664791)
chr3 (104-166)||(46292690-46292752)
chr3 (110-166)||(11221142-11221198)
chr3 (110-165)||(2862851-2862906)
chr3 (104-166)||(15020381-15020443)
chr3 (104-166)||(18168862-18168924)
chr3 (104-162)||(28843844-28843902)
chr3 (104-166)||(35747800-35747862)
chr3 (104-166)||(38675125-38675187)
chr3 (104-166)||(44036794-44036856)
chr3 (104-166)||(50711012-50711074)
chr3 (105-166)||(13997062-13997123)
chr3 (105-166)||(25061445-25061506)
chr3 (105-166)||(45539977-45540038)
chr3 (110-166)||(39778429-39778485)
chr3 (110-166)||(44920006-44920062)
chr3 (110-166)||(45214527-45214583)
chr3 (104-166)||(6954105-6954167)
chr3 (104-166)||(43378274-43378336)
chr3 (104-162)||(45567552-45567610)
chr3 (104-166)||(50710811-50710873)
chr3 (105-166)||(14201904-14201965)
chr3 (105-166)||(45171723-45171784)
chr3 (104-160)||(18461734-18461790)
chr3 (110-166)||(44976903-44976959)
chr3 (106-165)||(8084776-8084835)
chr3 (104-166)||(2773300-2773362)
chr3 (104-162)||(18678057-18678115)
chr3 (120-166)||(27812727-27812773)
chr3 (104-166)||(31574397-31574459)
chr3 (108-162)||(40612379-40612433)
chr3 (104-162)||(2397898-2397956)
chr3 (129-166)||(36546211-36546248)
chr3 (129-166)||(36562066-36562103)
chr3 (110-158)||(53712401-53712449)
chr3 (115-166)||(14463278-14463329)
chr3 (104-166)||(41943984-41944046)
[»] chr1 (42 HSPs)
chr1 (104-166)||(1501627-1501689)
chr1 (104-166)||(17504151-17504213)
chr1 (104-166)||(33471555-33471617)
chr1 (105-166)||(10296700-10296761)
chr1 (104-166)||(4695080-4695142)
chr1 (104-166)||(9877547-9877609)
chr1 (104-166)||(12650030-12650092)
chr1 (104-166)||(44344132-44344194)
chr1 (104-166)||(46283546-46283608)
chr1 (104-165)||(45286376-45286437)
chr1 (103-166)||(35521329-35521391)
chr1 (104-166)||(8828687-8828749)
chr1 (104-166)||(26095633-26095695)
chr1 (104-162)||(43726317-43726375)
chr1 (104-166)||(49021810-49021872)
chr1 (105-166)||(8853203-8853264)
chr1 (117-166)||(40934575-40934624)
chr1 (104-166)||(3459743-3459805)
chr1 (104-166)||(5586631-5586693)
chr1 (104-166)||(5618179-5618241)
chr1 (104-166)||(24234645-24234707)
chr1 (104-166)||(27547086-27547148)
chr1 (104-166)||(40770284-40770346)
chr1 (104-162)||(48524603-48524661)
chr1 (105-166)||(8641053-8641114)
chr1 (110-166)||(32694458-32694514)
chr1 (104-166)||(730907-730969)
chr1 (104-166)||(6488980-6489042)
chr1 (104-166)||(39672944-39673006)
chr1 (110-166)||(25012798-25012854)
chr1 (104-152)||(45315378-45315426)
chr1 (110-166)||(45569154-45569210)
chr1 (110-166)||(50312155-50312211)
chr1 (115-166)||(16515789-16515840)
chr1 (104-166)||(26874335-26874397)
chr1 (104-166)||(34480292-34480354)
chr1 (103-165)||(39363920-39363982)
chr1 (104-166)||(48970844-48970906)
chr1 (108-161)||(16087121-16087174)
chr1 (104-162)||(50208503-50208558)
chr1 (135-166)||(27065253-27065284)
chr1 (104-166)||(28554298-28554360)
[»] scaffold0200 (1 HSPs)
scaffold0200 (104-165)||(4471-4532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (105-166)||(258900-258961)
[»] scaffold0024 (1 HSPs)
scaffold0024 (103-166)||(107999-108062)
[»] scaffold0592 (1 HSPs)
scaffold0592 (104-166)||(8532-8594)
[»] scaffold0005 (1 HSPs)
scaffold0005 (104-166)||(257836-257898)
[»] scaffold0003 (1 HSPs)
scaffold0003 (123-166)||(323576-323619)
[»] scaffold0077 (1 HSPs)
scaffold0077 (104-166)||(10027-10089)
[»] scaffold0029 (1 HSPs)
scaffold0029 (104-166)||(73517-73579)
[»] scaffold0019 (1 HSPs)
scaffold0019 (104-156)||(45014-45065)


Alignment Details
Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 304 - 487
Target Start/End: Complemental strand, 45867415 - 45867229
Alignment:
Q  304 cctcttcaccgtacatagtattcaagttgttgcttcttgcatataattttatgagttgcttcttgttcattacatcatagcagtacataatatggataat 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45867415 cctcttcaccgtacatagtattcaagttgttgcttcttgcatataattttatgagttgcttcttgttcattacatcatagcagcacataatatggataat 45867316  T
Q  404 caatatcaacactggtgaac---tgtcataccaatattctcacaaagtaagaaaataaaataaaacagcacttatatctgtagcatt 487  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  45867315 caatatcaacactggtgaactgttgtcataccaatattctcacaaagtaaaaaaataaaataaaacagcacttatatctatagcatt 45867229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 8805914 - 8805852
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8805914 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 8805852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 8949462 - 8949400
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8949462 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 8949400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 45055492 - 45055430
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45055492 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 45055430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 46738408 - 46738470
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46738408 tttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagcttg 46738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 11338037 - 11338098
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11338037 ttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagcttg 11338098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 7149461 - 7149399
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  7149461 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaaacttg 7149399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16861040 - 16860978
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  16861040 tttcagtctttaaatctatgatctttgtctatgtttgcataagaatattagatttgaaccttg 16860978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 31813874 - 31813936
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31813874 tttcgatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 31813936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 42391466 - 42391404
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42391466 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 42391404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 45867589 - 45867651
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  45867589 tttcaatcttcaaatctatgatcctcgtctatgtttgtataagaatattagatttgaagcttg 45867651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 49114415 - 49114477
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  49114415 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagcttg 49114477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 12423990 - 12424051
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12423990 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 12424051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 20121350 - 20121411
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20121350 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 20121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 24331548 - 24331487
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24331548 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 24331487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 41857310 - 41857249
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41857310 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 41857249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 41922452 - 41922391
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  41922452 tttcaatcttcaaatctatgatcctagtctatgtttgcataagaatattagatttgaagctt 41922391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 44457953 - 44457892
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44457953 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 44457892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 17173253 - 17173197
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17173253 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 17173197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 19104416 - 19104479
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  19104416 ttttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 19104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 34287660 - 34287723
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattaga-tttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  34287660 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattttgaagcttg 34287723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 2699761 - 2699823
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  2699761 tttcagtcttcaaatctatgatcctcttctatgtttgcataagaatattagatttgaagcttg 2699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 31115942 - 31116004
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  31115942 tttcaatcttcaaatctatcatcctcgtctatgtttgcataagaatattatatttgaagcttg 31116004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 43575206 - 43575268
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  43575206 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattatatttgaagcttg 43575268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 49023722 - 49023784
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||    
T  49023722 tttcaatcttcaaatctataatcatcgtctatgtttgcataagaatattagatttgaaacttg 49023784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 41749725 - 41749786
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  41749725 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagcttg 41749786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 47221852 - 47221913
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  47221852 ttcagtcttcaaatctatgatcttcatctatgtttgtataagaatattagatttgaagcttg 47221913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 7173075 - 7173137
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  7173075 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagcttg 7173137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 21455713 - 21455667
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaa 161  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  21455713 aaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 21455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 31283324 - 31283262
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||| || |||||||||||||||||||||||||||||||||| ||||    
T  31283324 tttcagtcttcaaatctatgttcctcgtctatgtttgcataagaatattagatttgaaacttg 31283262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 38495058 - 38495120
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  38495058 tttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagcttg 38495120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 43268073 - 43268135
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||||||  |||| |||||||||||||||||||||| |||||||    
T  43268073 tttcaatcttcaaatctatgatcttcaactatatttgcataagaatattagatttaaagcttg 43268135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 45062206 - 45062268
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  45062206 tttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagcttg 45062268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 23036797 - 23036853
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||| |||||||    
T  23036797 tcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttaaagcttg 23036853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 21627088 - 21627131
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagattt 158  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  21627088 aaatctatgatcatcgtctatgtttgcataagaatattagattt 21627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 32165391 - 32165329
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||||| ||||||||| ||||    
T  32165391 tttcagtctttaaatctatgattttcgtttatgtttgaataagaatataagatttgaaacttg 32165329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 46426805 - 46426863
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||||| || ||| |||||||| || ||||||||||||||||||||||||||||||||    
T  46426805 tttcaatattcaaaactatgatcctcatctatgtttgcataagaatattagatttgaag 46426863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 11682077 - 11682128
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||| ||||    
T  11682077 aaatctataatcctcatctatgtttgcataagaatattagatttgaaacttg 11682128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 19124974 - 19125037
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||| |||| |||| ||||||| |||| ||||||||||||| ||||||||||||||| ||||    
T  19124974 ttttcagtcttcaaatatatgatcctcgtttatgtttgcataaaaatattagatttgaaacttg 19125037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 48766002 - 48766061
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagc 163  Q
    |||||||||| |||| |||| ||||| ||||| ||| |||||||||||||||||||||||    
T  48766002 tttcaatcttcaaatttatggtcttcatctatttttacataagaatattagatttgaagc 48766061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 21733238 - 21733176
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||  |||||||||||||||||||||||||| |||| |||||||    
T  21733238 tttcagtcttcaaatgtatgattctcgtctatgtttgcataagaatattatattttaagcttg 21733176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 32064560 - 32064498
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| |||| | ||| ||||||||| ||||||||||||||||| ||||||||    
T  32064560 tttcaatcttcaaatttatggttttcatctatgtttacataagaatattagattggaagcttg 32064498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 27552041 - 27551996
Alignment:
Q  117 atctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||||| |||||||||||||||| ||||||  ||||||||    
T  27552041 atctatgatctttgtctatgtttgcataataatatttaatttgaag 27551996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 14792945 - 14792989
Alignment:
Q  122 tgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| || ||||||||||||||| |||||||| |||||||||||    
T  14792945 tgatcatcatctatgtttgcataaaaatattagttttgaagcttg 14792989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 15239935 - 15239979
Alignment:
Q  122 tgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| || ||||||||||||||| |||||||| |||||||||||    
T  15239935 tgatcatcatctatgtttgcataaaaatattagttttgaagcttg 15239979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 13577407 - 13577469
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13577407 tttcaatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 13577469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 14871905 - 14871842
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14871905 ttttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 14871842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 3279332 - 3279394
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3279332 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 3279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 13697462 - 13697524
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13697462 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 13697524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16736973 - 16736911
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16736973 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 16736911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 32772135 - 32772197
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32772135 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 32772197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 40952238 - 40952176
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40952238 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 40952176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 18707441 - 18707378
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  18707441 ttttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 18707378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1099036 - 1099098
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  1099036 tttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 1099098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 2467203 - 2467265
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2467203 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 2467265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 7601737 - 7601799
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7601737 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 7601799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 33429703 - 33429641
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  33429703 tttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 33429641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 2426399 - 2426342
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaa 161  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2426399 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 2426342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 2961038 - 2961099
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2961038 tttcgatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagctt 2961099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 2969506 - 2969567
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2969506 tttcgatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagctt 2969567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 39589721 - 39589782
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39589721 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 39589782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 31618322 - 31618373
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31618322 aaatctataatcttcgtctatgtttgcataagaatattagatttgaagcttg 31618373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 2492808 - 2492869
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  2492808 tttcaatcttcaaatctatgatct-cgtctatgtttacataagaatattagatttgaagcttg 2492869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 7610407 - 7610469
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  7610407 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 7610469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 12854719 - 12854781
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  12854719 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttaaagcttg 12854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 24858573 - 24858511
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  24858573 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 24858511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 33381599 - 33381537
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  33381599 tttcaatcttcaaatttatgatcctcgtctatttttgcataagaatattagatttgaagcttg 33381537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 165
Target Start/End: Complemental strand, 13455845 - 13455785
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  13455845 ttcagtcttcaaatctatgatcctcgtctatgtttgcattagaatattagatttgaagctt 13455785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 3168263 - 3168201
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| || | ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3168263 tttcaatcttcaattatatgatcctcgtctatgtttgcataagaatattatatttgaagcttg 3168201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 3974357 - 3974419
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||| |||| ||||||| |||||||    
T  3974357 tttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatagtagatttaaagcttg 3974419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 15858176 - 15858118
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||    
T  15858176 tttcaatctttaaatctatgatctttatctatgttcgtataagaatattagatttgaag 15858118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 19984430 - 19984368
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  19984430 tttcagtcttcaaatctatgatattcttctatgttttcataagaatattagatttgaagcttg 19984368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Complemental strand, 37943695 - 37943641
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagattt 158  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  37943695 tttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 37943641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 42610950 - 42610889
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||    
T  42610950 ttcagtcttcaaatctataattctcgtctatgtttgcataagaatattagatttgaagcttg 42610889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 6540135 - 6540191
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  6540135 tcttcaaatctatgatcctcgtctatgtttggataagaatattagatttgaaacttg 6540191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 14729596 - 14729652
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  14729596 tctttaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 14729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 19131025 - 19131076
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  19131025 aaatctatgatcctcgtttatgtttggataagaatattagatttgaagcttg 19131076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1643683 - 1643745
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| || ||||||||||||||||| ||||| ||||||||||||    
T  1643683 tttcagtcttcaaatctatgatcctcttctatgtttgcataagattattaaatttgaagcttg 1643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 5239448 - 5239386
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||||| |||||||||||||||||||||||  ||||||||||||    
T  5239448 tttcagtcttcaaatttatgatctttgtctatgtttgcataagaatatttaatttgaagcttg 5239386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 17539584 - 17539522
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| ||||||| ||||||| || ||||||||||||||| |||||||| |||||||||||    
T  17539584 tttcaatttttaaatttatgatcatcatctatgtttgcataaaaatattagttttgaagcttg 17539522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 23226752 - 23226814
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||| ||||| ||||||||| ||||||||||| | ||||||| ||||    
T  23226752 tttcaatctttaaatctatggtcttcatctatgtttacataagaatatgaaatttgaaccttg 23226814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 37092323 - 37092385
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  37092323 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 37092385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 22621197 - 22621253
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  22621197 tcttcaaatttatgatcctcatctatgtttgcataataatattagatttgaagcttg 22621253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 8357235 - 8357177
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||    
T  8357235 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaag 8357177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 30129637 - 30129582
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| | |||||||||||||||| ||||||||||| ||||||||    
T  30129637 tcttcaaatctatgatccttgtctatgtttgcataa-aatattagattcgaagcttg 30129582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 12875838 - 12875873
Alignment:
Q  131 tctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||||||| |||||||    
T  12875838 tctatgtttgcataagaatattagatttaaagcttg 12875873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 267
Target Start/End: Complemental strand, 8874387 - 8874351
Alignment:
Q  231 tgttacttgaaattaagtcaagagactaaaattgtaa 267  Q
    |||||||||||||||||| |||||||||||| |||||    
T  8874387 tgttacttgaaattaagttaagagactaaaaatgtaa 8874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 164
Target Start/End: Original strand, 42030683 - 42030743
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagct 164  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42030683 tttcaatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagct 42030743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1270253 - 1270315
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1270253 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 1270315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 9027195 - 9027133
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9027195 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 9027133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 11724787 - 11724725
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11724787 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 11724725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 17549213 - 17549275
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17549213 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 17549275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 23926535 - 23926597
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23926535 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 23926597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 26499581 - 26499519
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26499581 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 26499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 29175068 - 29175130
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29175068 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 29175130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 30488250 - 30488188
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30488250 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 30488188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 20663879 - 20663818
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20663879 tttcaatctttaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagctt 20663818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1650647 - 1650709
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1650647 tttcaatcttcaaatctatgatccgcgtctatgtttgcataagaatattagatttgaagcttg 1650709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 2782837 - 2782767
Alignment:
Q  19 gaatgaaagcatttactacaagagaaagtggaaatat-gattattacagcacataaactagaaactaattt 88  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||    
T  2782837 gaatgaaagcatttactacaagagagagtggatatattgattattacatcacataaactagaaactaattt 2782767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 9912056 - 9912118
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9912056 tttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagcttg 9912118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 10192229 - 10192291
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  10192229 tttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 10192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16350762 - 16350700
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16350762 tttcaatattcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 16350700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 29421837 - 29421899
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  29421837 tttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagcttg 29421899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 44490448 - 44490510
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44490448 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 44490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 31556891 - 31556952
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  31556891 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatatttgatttgaagctt 31556952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 341476 - 341420
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  341476 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 341420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 22196073 - 22196129
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22196073 tcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagcttg 22196129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 22899178 - 22899127
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22899178 aaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 22899127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 35412032 - 35412083
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35412032 aaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 35412083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1479171 - 1479233
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  1479171 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 1479233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 3889029 - 3888979
Alignment:
Q  116 aatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3889029 aatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 3888979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 33274541 - 33274603
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  33274541 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaaacttg 33274603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 42950663 - 42950725
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  42950663 tttcagtcttcaaatctatgatcctcttctatgtttgcataagaatattagatttgaagcttg 42950725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 10714152 - 10714214
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  10714152 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagcttg 10714214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 13421244 - 13421182
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  13421244 tttcagtcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttgaaacttg 13421182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 15461403 - 15461461
Alignment:
Q  108 aatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  15461403 aatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaaacttg 15461461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 11723875 - 11723814
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  11723875 ttcagtcttcaaatctatgatcctcgtatatatttgcataagaatattagatttgaagcttg 11723814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 28789026 - 28788975
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||||    
T  28789026 aaatctatgatcctcgtctatatttgtataagaatattagatttgaagcttg 28788975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 38574740 - 38574689
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||||||||    
T  38574740 aaatctatgattatcgtctatatttgcataagaatattagatttgaagcttg 38574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 3322161 - 3322199
Alignment:
Q  128 tcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3322161 tcgtctatgtttgcataagaatattagatttgaagcttg 3322199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 11122788 - 11122846
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  11122788 tttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatataagatttgaag 11122846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 22486164 - 22486202
Alignment:
Q  128 tcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22486164 tcgtctatgtttgcataagaatattagatttgaagcttg 22486202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 19079423 - 19079371
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||| |||||||||||| || |||||||||| |||||||||||||||||||||    
T  19079423 tcttcaaatctatgatcctcatctatgtttgtataagaatattagatttgaag 19079371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 2450243 - 2450294
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  2450243 aaatctatgatcattgtctatgtttgcataagaatatttaatttgaagcttg 2450294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 18449502 - 18449464
Alignment:
Q  128 tcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  18449502 tcgtctatgtttgcataagaatattagatttgaatcttg 18449464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 18508620 - 18508566
Alignment:
Q  109 atctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagc 163  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||| |||||||||    
T  18508620 atctttaaatctatggccttcatctatgtttgcataaaaatattaaatttgaagc 18508566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 29154230 - 29154172
Alignment:
Q  108 aatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||| | |||| | ||| ||||||||||||||| ||||||||||||||||||||    
T  29154230 aatctttaactttatggtgttcatctatgtttgcataaaaatattagatttgaagcttg 29154172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 40657450 - 40657506
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |  ||||||||||| ||||||||||| ||||||||||||    
T  40657450 tcttcaaatctatgatccttatctatgtttgcttaagaatattatatttgaagcttg 40657506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 30842211 - 30842273
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| ||||||| |||| ||||| |  |||||| ||||||||||||||||||||| ||||    
T  30842211 tttcaatttttaaatttatggtcttcattgatgtttacataagaatattagatttgaaacttg 30842273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 38574763 - 38574819
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaa 161  Q
    |||| |||| |||||||||||  |||||||| ||||||||||||| |||||| ||||    
T  38574763 ttcagtcttcaaatctatgattatcgtctatatttgcataagaatgttagatatgaa 38574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 41449 - 41387
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41449 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 41387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 33279080 - 33279142
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33279080 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 33279142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 42684958 - 42684896
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42684958 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 42684896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 39198787 - 39198725
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39198787 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 39198725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 29596546 - 29596608
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  29596546 tttcaatcttcaaatctatgatactcgtctatgtttgcataagaatattagatttaaagcttg 29596608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 36556679 - 36556741
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  36556679 tttcaatcttcaaatttatgatcatcgtctatgtttacataagaatattagatttgaagcttg 36556741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 41617184 - 41617246
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  41617184 tttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaaacttg 41617246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8156852 - 8156914
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  8156852 tttcagtcttcaaatctataatcctggtctatgtttgcataagaatattagatttgaagcttg 8156914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 12649650 - 12649588
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||||| | || ||| | ||||||||||||||||||||||||||||||||||||    
T  12649650 tttcaatctttaaatatgtggtctccatctatgtttgcataagaatattagatttgaagcttg 12649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 17494893 - 17494831
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| |||||| |||||||    
T  17494893 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttaaagcttg 17494831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 18805889 - 18805947
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  18805889 tttcaatcttcaaatatatgatcctcgtatatgtttgcataagaatattagatttgaag 18805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 26938356 - 26938294
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||    
T  26938356 tttcagtctttaaatctataatcctggtctatgtttgtataagaatattagatttgaagcttg 26938294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 148462 - 148401
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  148462 ttcagtcttcaaatctatgatcctcatctatgtttgcataagaatattaaatttgaagcttg 148401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 18929845 - 18929905
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  18929845 ttcagtctttaaatctatgatcttcgtctatgtttgtataagaat-ttagatttgaaacttg 18929905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 21660897 - 21660836
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  21660897 tttcagtcttcaaatctatgatctttgtctatgtttgcataagaatatttaatttgaagctt 21660836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 34198999 - 34198943
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||    
T  34198999 tcttcaaatctatgatcctcttctatgtttgcataagaatattaaatttgaagcttg 34198943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 40277386 - 40277330
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  40277386 tcttcaaatctatgatcctcgtctatgtttgcataagtatattagacttgaagcttg 40277330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 1235728 - 1235790
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||| ||||| |||||||||||||||||||||||  ||||||||||||    
T  1235728 tttcagtcttcaaatctataatctttgtctatgtttgcataagaatatttaatttgaagcttg 1235790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 27712908 - 27712970
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  27712908 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 27712970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 28828386 - 28828324
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  28828386 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 28828324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 30253796 - 30253734
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  30253796 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 30253734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 34632369 - 34632431
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||| ||||||| ||||||||||||    
T  34632369 tttcagtcttcaaatctatgatcattgtctatgtttgcataaaaatattaaatttgaagcttg 34632431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 43497377 - 43497315
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||| | ||||||||||||    
T  43497377 tttcaatcttcaaatttatggtcttcatctatgtttgcataagaatatcatatttgaagcttg 43497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 29726697 - 29726652
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaat 149  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  29726697 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaat 29726652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 26187275 - 26187334
Alignment:
Q  107 caatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||| |  |||||||||    
T  26187275 caatcttcaaatctatggtcttcttctatgtttgcataagaatattaaaaatgaagcttg 26187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 30464069 - 30464120
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  30464069 aaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 30464120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 4968180 - 4968118
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||  |||| |||||||    
T  4968180 tttcagtcttcaaatctatgatctttatctatgtttgcataagaatatttaatttaaagcttg 4968118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 9887279 - 9887341
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||  |||| |||||||    
T  9887279 tttcagtcttcaaatctatgatctttatctatgtttgcataagaatatttaatttaaagcttg 9887341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 24419586 - 24419644
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| ||||||| | ||||  |||||||||| |||||||||||||||||||||    
T  24419586 tttcaatcttcaaatctacggtctttatctatgtttgtataagaatattagatttgaag 24419644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 33527110 - 33527048
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||  ||||||||||| |||||| |||||    
T  33527110 tttcagtcttcaaatctatgatcctcgtctatgtttgtttaagaatattatatttgatgcttg 33527048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 38229754 - 38229816
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||| | ||||  |||||||||| ||||||||||||||||| |||||||    
T  38229754 tttcaatcttcaaatctacggtctttatctatgtttgtataagaatattagattttaagcttg 38229816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 37727343 - 37727405
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| |||| || | |||||||||||||||||||||||  ||||||||||||    
T  37727343 tttcagtcttcaaatttatgttccttgtctatgtttgcataagaatatttaatttgaagcttg 37727405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 10925272 - 10925224
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatatt 152  Q
    |||||||||| | |||||||||| | || ||||||||||||||||||||    
T  10925272 tttcaatcttcagatctatgatccttgtttatgtttgcataagaatatt 10925224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 685123 - 685061
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  685123 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 685061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 24325162 - 24325100
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24325162 tttctatctttaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 24325100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 22568908 - 22568969
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22568908 ttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 22568969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 3012084 - 3012021
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3012084 ttttcaattttcaaatctatgatcttcatctatgtttgcataagaatattagatttgaagcttg 3012021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 9220247 - 9220309
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  9220247 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagagtattagatttgaagcttg 9220309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 9546581 - 9546519
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9546581 tttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagcttg 9546519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 9899339 - 9899397
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9899339 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 9899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 13853312 - 13853250
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  13853312 tttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 13853250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 17853813 - 17853751
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  17853813 tttcaatcttcaaatctatgatcctcgtctatgtttgcatatgaatattagatttgaagcttg 17853751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 25121667 - 25121605
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25121667 tttcaatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaaacttg 25121605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 13178387 - 13178331
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13178387 tcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagcttg 13178331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 20027923 - 20027979
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20027923 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 20027979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8129677 - 8129739
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  8129677 tttcagtcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagcttg 8129739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 8488032 - 8487970
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  8488032 tttcagtcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 8487970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 3105773 - 3105712
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3105773 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagcttg 3105712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 1925260 - 1925318
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  1925260 tttcaatcttcaaatctatgatcctcgtctatttttgcataagaatgttagatttgaag 1925318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 2316633 - 2316695
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  2316633 tttcagtcttcaaatctattatcctcttctatgtttgcataagaatattagatttgaagcttg 2316695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 2883053 - 2882991
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  2883053 tttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagcttg 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 24896342 - 24896280
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  24896342 tttcagtcttcaaatctatgatctttgtttatgtttgcataagaatattaaatttgaagcttg 24896280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 21926234 - 21926173
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||||||| ||| || | |||||||||||||||||||||||||||||||||    
T  21926234 tttcaatcttcaaatctattatcctcatttatgtttgcataagaatattagatttgaagctt 21926173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 2863750 - 2863688
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  2863750 tttcagtcttcaaatctatgatcctcgtttatgtttggataataatattagatttgaagcttg 2863688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 28852332 - 28852386
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagattt 158  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  28852332 tttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 28852386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 12240624 - 12240684
Alignment:
Q  104 tttcaatctttaaatctatga-tcttcgtctatgtttgcataagaatattagatttgaagc 163  Q
    ||||| |||| |||||||||| || |||||||||||| |||||||||||||||||||||||    
T  12240624 tttcagtcttcaaatctatgaatcctcgtctatgtttacataagaatattagatttgaagc 12240684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 25026143 - 25026083
Alignment:
Q  106 tcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| |||| || |||| |||||||||||||||||  ||||||||||||||||||||    
T  25026143 tcaatcttcaaatataggatcctcgtctatgtttgcatataaatattagatttgaagcttg 25026083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 166
Target Start/End: Original strand, 11361957 - 11361986
Alignment:
Q  137 tttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||||||||||||||||||||    
T  11361957 tttgcataagaatattagatttgaagcttg 11361986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 14655246 - 14655282
Alignment:
Q  130 gtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||  ||||||||||||    
T  14655246 gtctatgtttgcataagaatatttaatttgaagcttg 14655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 41935663 - 41935601
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41935663 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 41935601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 26842969 - 26842908
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26842969 ttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 26842908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 46648213 - 46648274
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  46648213 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagctt 46648274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 44835116 - 44835179
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  44835116 ttttcaatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagcttg 44835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 52538022 - 52538085
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52538022 ttttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 52538085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 7067386 - 7067448
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7067386 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 7067448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 25331961 - 25332023
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  25331961 tttcaatcttcaaatctatgaccctcgtctatgtttgcataagaatattagatttgaagcttg 25332023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 32188058 - 32188120
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32188058 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaaacttg 32188120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 32922237 - 32922175
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32922237 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 32922175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 35130966 - 35130908
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  35130966 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 35130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 45801362 - 45801420
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  45801362 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 45801420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 46689301 - 46689363
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46689301 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 46689363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 16020126 - 16020065
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16020126 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 16020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 105 - 165
Target Start/End: Original strand, 39792062 - 39792122
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  39792062 ttcaatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagatttgaagctt 39792122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 18568169 - 18568231
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18568169 tttcagtcttcaaatctatgatcatcgtctatgtttgcataagaatataagatttgaagcttg 18568231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 26886754 - 26886816
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  26886754 tttcaatcttcaaatctatgatcctcatctatgtttacataagaatattagatttgaagcttg 26886816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 52654076 - 52654138
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  52654076 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 52654138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 17362443 - 17362504
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  17362443 ttcagtcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 17362504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 41376748 - 41376696
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  41376748 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 41376696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 5748019 - 5748077
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  5748019 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaag 5748077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 10993795 - 10993733
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||| |||| |||||||||||||||||| ||||||| ||||||||||||    
T  10993795 tttcaatcttcaaatctacgatcctcgtctatgtttgcataaaaatattatatttgaagcttg 10993733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 22539831 - 22539893
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  22539831 tttcagtcttcaaatctataatcctcttctatgtttgcataagaatattagatttgaagcttg 22539893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 30637116 - 30637054
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  30637116 tttcaatcttcaaatttatgatctttatctatgtttacataagaatattagatttgaagcttg 30637054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 37068758 - 37068819
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| ||||    
T  37068758 tttcaatcttcaaatctatgat-tccgtctatgtttgcataagaatattagatttgaaacttg 37068819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 44551085 - 44551023
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| | |||| ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  44551085 tttcaatcctcaaatttatgatcctcgtctatgtttgtataagaatattagatttgaagcttg 44551023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 45655837 - 45655899
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  45655837 tttcagtcttcaaatttatgatcatcgtctatgtttgcataagaatataagatttgaagcttg 45655899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 38556106 - 38556050
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  38556106 tcttcaaatctatgatcctcgtctatgtttgtataataatattagatttgaagcttg 38556050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 9902797 - 9902862
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgc---ataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| ||||||||||||||   |||| ||||||||||||||||||||    
T  9902797 tttcaatcttcaaatctatgatcctcgtctatgtttgcataataataatattagatttgaagcttg 9902862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16530488 - 16530426
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| || |||||||| ||| ||||||||  |||||||||||||||||||||||||||||    
T  16530488 tttcaattttcaaatctattatcctcgtctatacttgcataagaatattagatttgaagcttg 16530426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 18635984 - 18636046
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||| ||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  18635984 tttcaatcttcaaatccatggtcttcatctatgtttgtataagaatattagatttgaaacttg 18636046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 23572745 - 23572807
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| | |||||||||||||||||||||||  ||||||||||||    
T  23572745 tttcaatcttcaaatttatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 23572807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 15516474 - 15516414
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  15516474 ttcagtcttcaaatctatgatcctcgtctatgtttgcattagaatattag-tttgaagcttg 15516414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 32488734 - 32488790
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  32488734 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 32488790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 20984058 - 20984120
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||  ||||||||||||||||| ||||||||||||    
T  20984058 tttcagtcttcaaatctatgatccttgtctaaatttgcataagaatattaaatttgaagcttg 20984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 23963017 - 23962955
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||| | ||| ||||||||||||||| |||||||||| |||| ||||    
T  23963017 tttcaatcttcaaatctatggttttcatctatgtttgcataacaatattagatctgaaacttg 23962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 24270506 - 24270568
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||  || ||||||||||||||||||||||||||| ||||||||    
T  24270506 tttcagtcttcaaatttatgattctcttctatgtttgcataagaatattagattcgaagcttg 24270568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Complemental strand, 26948138 - 26948100
Alignment:
Q  128 tcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  26948138 tcgtctatgtttgcataagaatattatatttgaagcttg 26948100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 31857725 - 31857787
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||| ||||||  ||||||||||||    
T  31857725 tttcagtcttcaaatctatgatccttgtctatgtttgcataataatatttaatttgaagcttg 31857787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 46674757 - 46674707
Alignment:
Q  108 aatctttaaatctatgatcttcgtctatgtttgcataagaatattagattt 158  Q
    |||||| ||||||| |||| ||||||||||||| |||||||||||||||||    
T  46674757 aatcttcaaatctacgatcctcgtctatgtttgtataagaatattagattt 46674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 49387327 - 49387385
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||  |||||||||||||||||  ||||||||||||||||    
T  49387327 tttcagtcttcaaatctatgattctcgtctatgtttgcatagcaatattagatttgaag 49387385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 43264214 - 43264277
Alignment:
Q  104 tttcaatctttaaatctatg-atcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||  ||| |||||||| ||||||||||| ||||||||||||||||||    
T  43264214 tttcagtcttcaaatctatttatcctcgtctatatttgcataagagtattagatttgaagcttg 43264277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 36868176 - 36868238
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |  ||||||||||||| ||||||| ||||||||||||    
T  36868176 tttcagtcttcaaatctatgatccttgcttatgtttgcataaaaatattaaatttgaagcttg 36868238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 9644922 - 9644967
Alignment:
Q  120 tatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| | ||||||||||||||||||||| |||| ||||||    
T  9644922 tatgatcttcatttatgtttgcataagaatattatatttaaagctt 9644967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 50512761 - 50512797
Alignment:
Q  231 tgttacttgaaattaagtcaagagactaaaattgtaa 267  Q
    |||||||||||||||||| || |||||||||||||||    
T  50512761 tgttacttgaaattaagttaaaagactaaaattgtaa 50512797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 15543169 - 15543107
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15543169 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 15543107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 49002379 - 49002441
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49002379 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 49002441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 29434469 - 29434409
Alignment:
Q  106 tcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29434469 tcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 29434409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 11439970 - 11439912
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11439970 tttccatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 11439912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 11989685 - 11989623
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  11989685 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattatatttgaagcttg 11989623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 20209294 - 20209356
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  20209294 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattttaagcttg 20209356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 21017065 - 21017127
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  21017065 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagagtattagatttgaagcttg 21017127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 44664791 - 44664729
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  44664791 tttcaatcttcaaatcaatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 44664729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 46292752 - 46292690
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  46292752 tttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 46292690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 11221142 - 11221198
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11221142 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 11221198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 2862851 - 2862906
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2862851 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagctt 2862906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 15020443 - 15020381
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15020443 tttcagtcttcaaatctatgatcctcgtctatgtttgcataataatattagatttgaagcttg 15020381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 18168924 - 18168862
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18168924 tttcagtcttcaaatatatgatcttcgtctatgtttgcataagaatataagatttgaagcttg 18168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 28843902 - 28843844
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||    
T  28843902 tttcaatcttcaaatctatgatcctcatctatgtttgcataagaatattagatttgaag 28843844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 35747862 - 35747800
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  35747862 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 35747800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 38675125 - 38675187
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| ||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  38675125 tttcagtctttaaatctatgatcctcgtttatgtttgtataagaatattagatttgaagcttg 38675187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 44036856 - 44036794
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  44036856 tttcaatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaaacttg 44036794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 50711012 - 50711074
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  50711012 tttcagtcttcaaatctatgatcatcgtctatgtttgcataagaatataagatttgaagcttg 50711074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 13997062 - 13997123
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  13997062 ttcagtcttcaaatctataatcctcgtctatgtttgcataagaatattagatttgaagcttg 13997123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 25061445 - 25061506
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  25061445 ttcagtcttcaaatctatgatcctcctctatgtttgcataagaatattagatttgaagcttg 25061506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 45539977 - 45540038
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  45539977 ttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagcttg 45540038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 39778429 - 39778485
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  39778429 tcttcaaatctatgatcctcgtctttgtttgcataagaatattagatttgaagcttg 39778485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 44920062 - 44920006
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  44920062 tcttcaaatctatgatccttgtctatgtttgcataagaatattagatttgaagcttg 44920006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 45214527 - 45214583
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  45214527 tcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagcttg 45214583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 6954167 - 6954105
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  6954167 tttcagtcttcaaatctatgatccttgtctatgtttgtataagaatattagatttgaagcttg 6954105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 43378274 - 43378336
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  43378274 tttcaatcttcaaatatatgatcctcgtctatgtttgcataacaatattatatttgaagcttg 43378336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 45567552 - 45567610
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||    
T  45567552 tttcaatcttcaaatctatgattctcgtctatgtttgcataaaaatattagatttgaag 45567610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 50710873 - 50710811
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  50710873 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatataagatttgaagcttg 50710811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 14201965 - 14201904
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  14201965 ttcagtcttcaaatctatgatcatcgtctatgtttacataaaaatattagatttgaagcttg 14201904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 45171723 - 45171784
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||    
T  45171723 ttcagtcttcaaatctacgatcctcgtctatttttgcataagaatattagatttgaagcttg 45171784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 18461790 - 18461734
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttga 160  Q
    ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  18461790 tttcagtctttaaatctatggtcgtcgtctatatttgcataagaatattagatttga 18461734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 44976903 - 44976959
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||||    
T  44976903 tcttcaaatttatgatcctcgtctatgtttgaataagaatattagatttgaagcttg 44976959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8084835 - 8084776
Alignment:
Q  106 tcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    ||||| ||||||| |||||||||| |||||||||||| || |||||||||||||||||||    
T  8084835 tcaatatttaaatatatgatcttcttctatgtttgcacaacaatattagatttgaagctt 8084776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 2773300 - 2773362
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||  |||||||||||||||||||||||| ||||||||||||||    
T  2773300 tttcagtcttcaaatttatgattctcgtctatgtttgcataagaatataagatttgaagcttg 2773362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 18678057 - 18678115
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||| |||||||||||||||||| ||||| ||||||||||    
T  18678057 tttcagtcttcaaatctatgatcctcgtctatgtttgcataaaaatataagatttgaag 18678115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 27812727 - 27812773
Alignment:
Q  120 tatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27812727 tatgatcctcgtctatgtttgcataagaatattagatttgaaacttg 27812773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 31574397 - 31574459
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||||||  ||||||||||||||||| ||||||||||||||| ||||    
T  31574397 tttcagtcttcaaatctatgatcagcgtctatgtttgcataaaaatattagatttgaaacttg 31574459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 40612433 - 40612379
Alignment:
Q  108 aatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  40612433 aatcttcaaatctatgatcatcgtctatgtttgcataataattttagatttgaag 40612379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 2397956 - 2397898
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||| |||| ||||| ||||| ||| ||||||||||||||||||||||    
T  2397956 tttcaatcttcaaatttatggtcttcatctatatttacataagaatattagatttgaag 2397898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 36546248 - 36546211
Alignment:
Q  129 cgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||| |||||||||||||||||||||||    
T  36546248 cgtctatgtttgcaaaagaatattagatttgaagcttg 36546211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 36562066 - 36562103
Alignment:
Q  129 cgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||||| |||||||||||||||||||||||    
T  36562066 cgtctatgtttgcaaaagaatattagatttgaagcttg 36562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 53712401 - 53712449
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagattt 158  Q
    |||| |||| ||||||||||||||||||||||| || ||||||||||||    
T  53712401 tcttcaaatttatgatcttcgtctatgtttgcagaaaaatattagattt 53712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 14463278 - 14463329
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||  | ||||||||||||||||||||||| ||||||| ||||    
T  14463278 aaatctatgatccgcatctatgtttgcataagaatattatatttgaaacttg 14463329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 41944046 - 41943984
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| |||| || | |||||||||||||||||||||||  ||||||||||||    
T  41944046 tttcagtcttcaaatttatgttccttgtctatgtttgcataagaatatttaatttgaagcttg 41943984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 1501689 - 1501627
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1501689 tttcaatcttcaaatctatgattttcgtctatgtttgcataagaatattagatttgaagcttg 1501627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 17504213 - 17504151
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17504213 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 17504151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 33471555 - 33471617
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  33471555 tttcaatctttaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 33471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 10296761 - 10296700
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10296761 ttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 10296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 4695080 - 4695142
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  4695080 tttcaatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaaacttg 4695142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 9877547 - 9877609
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9877547 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 9877609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 12650092 - 12650030
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  12650092 tttcaatcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttgaagcttg 12650030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 44344194 - 44344132
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44344194 tttcagtcttcaaatctatgatcttcgtctatgtttgcataagaatataagatttgaagcttg 44344132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 46283546 - 46283608
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46283546 tttcaattttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 46283608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 45286376 - 45286437
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  45286376 tttcaatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagctt 45286437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 35521391 - 35521329
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35521391 ttttcagtcttcaaatctatgatctt-gtctatgtttgcataagaatattagatttgaagcttg 35521329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 8828749 - 8828687
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||    
T  8828749 tttcaatcttcaaatctatgatcattgactatgtttgcataagaatattagatttgaagcttg 8828687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 26095633 - 26095695
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  26095633 tttcagtcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagcttg 26095695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 43726375 - 43726317
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  43726375 tttcaatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagatttgaag 43726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 49021810 - 49021872
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  49021810 tttcaatcttcaaatctatgatcctcgtctatatttgcattagaatattagatttgaagcttg 49021872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 8853264 - 8853203
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  8853264 ttcagtcttcaaatctatgatcctcgtctatgtttacataagaatattagatttgaagcttg 8853203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 40934575 - 40934624
Alignment:
Q  117 atctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40934575 atctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 40934624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 3459805 - 3459743
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  3459805 tttcagtcttcaaatctatgatcctcgtttatgtttgtataagaatattagatttgaagcttg 3459743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 5586631 - 5586693
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||    
T  5586631 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagcttg 5586693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 5618241 - 5618179
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  5618241 tttcagtcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagcttg 5618179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 24234707 - 24234645
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||| |||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  24234707 tttcaatcttcaaatttatggtcttcatctatgtttgcataagaatataagatttgaagcttg 24234645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 27547086 - 27547148
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  27547086 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatataaaatttgaagcttg 27547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 40770284 - 40770346
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  40770284 tttcagtcttcaaatctatgatcctcgtctatgtttgcataagagtataagatttgaagcttg 40770346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 48524661 - 48524603
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    |||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||    
T  48524661 tttcaatcttcaaatctatgatcctcatctatgtttgcataaaaatattagatttgaag 48524603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 8641114 - 8641053
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  8641114 ttcagtcttcaaatctatgatcatcggctatgttttcataagaatattagatttgaagcttg 8641053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 32694458 - 32694514
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  32694458 tcttcaaatttatgatcctcgtttatgtttgcataagaatattagatttgaagcttg 32694514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 730969 - 730907
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  730969 tttcagtcttcaaatttatgatcctcgtctatgtttgtataagaatataagatttgaagcttg 730907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 6489042 - 6488980
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||  ||||||||||||    
T  6489042 tttcagtcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagcttg 6488980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 39673006 - 39672944
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||  |||||| |||||||||||||||||| ||||||||||||||| ||||    
T  39673006 tttcaatcttcaaattcatgatcctcgtctatgtttgcataaaaatattagatttgaaacttg 39672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 25012798 - 25012854
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| | |||||||||||| ||| ||||||||||||||||||||    
T  25012798 tcttcaaatctatgatccttgtctatgtttgcgtaaaaatattagatttgaagcttg 25012854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 45315426 - 45315378
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatatt 152  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  45315426 tttcagtcttcaaatctatgatctttgtctatgtttgcataagaatatt 45315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 45569154 - 45569210
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| |||||||| ||||||||||||||||| ||||||| ||||    
T  45569154 tcttcaaatctatgatcctcgtctatatttgcataagaatattatatttgaaacttg 45569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 50312155 - 50312211
Alignment:
Q  110 tctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||  ||||||||    
T  50312155 tcttcaaatctatgatcctcgtctatggttgcataagaatattagatccgaagcttg 50312211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 166
Target Start/End: Original strand, 16515789 - 16515840
Alignment:
Q  115 aaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||| |||||||| |||||||| |||||||||||||||| ||||    
T  16515789 aaatctatgatcctcgtctatatttgcatacgaatattagatttgaaccttg 16515840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 26874397 - 26874335
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | || ||||||||||||||||||||  ||||||||||||    
T  26874397 tttcagtcttcaaatctatgatccttgtttatgtttgcataagaatatttaatttgaagcttg 26874335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 34480354 - 34480292
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | || ||||||||||||||||||||  ||||||||||||    
T  34480354 tttcagtcttcaaatctatgatccttgtttatgtttgcataagaatatttaatttgaagcttg 34480292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 39363982 - 39363920
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||| ||  |||||||| | ||| |||||||||||||||||||||||||||||| ||||    
T  39363982 ttttcaatattctaatctatggttttcatctatgtttgcataagaatattagatttgaggctt 39363920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 48970844 - 48970906
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| ||||| ||||||| |||| || | ||||||||||||||||||||||||||||| ||||    
T  48970844 tttccatcttcaaatctacgatcctcttttatgtttgcataagaatattagatttgaaacttg 48970906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 16087121 - 16087174
Alignment:
Q  108 aatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaa 161  Q
    |||||| ||||||||| ||||| ||||||||||||||| |||||||||| ||||    
T  16087121 aatcttcaaatctatggtcttcatctatgtttgcataataatattagatctgaa 16087174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 50208503 - 50208558
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 162  Q
    ||||| |||| |||||||||||| ||||||||||||||||   ||||||||||||||||    
T  50208503 tttcagtcttcaaatctatgatcctcgtctatgtttgcat---aatattagatttgaag 50208558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 166
Target Start/End: Complemental strand, 27065284 - 27065253
Alignment:
Q  135 tgtttgcataagaatattagatttgaagcttg 166  Q
    ||||||||||||||||||||||||||||||||    
T  27065284 tgtttgcataagaatattagatttgaagcttg 27065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 28554360 - 28554298
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||||||||||| | |||||||||| ||| ||||||||  ||||||||||||    
T  28554360 tttcagtcttcaaatctatgatccttgtctatgtttacatgagaatatttaatttgaagcttg 28554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 4532 - 4471
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagctt 165  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  4532 tttcaatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagctt 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 258900 - 258961
Alignment:
Q  105 ttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  258900 ttcagtcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagcttg 258961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 107999 - 108062
Alignment:
Q  103 ttttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  107999 ttttcaatcttcgaatctatgattctcgtctatgtttgcataagaatattagatttgaaacttg 108062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 8532 - 8594
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| ||||||||||||   || ||||||||||||||||||||||||||||||||||    
T  8532 tttcaatcttcaaatctatgatccctgtttatgtttgcataagaatattagatttgaagcttg 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 257836 - 257898
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| ||||| |||||| |||||||||||||||||||||||| ||||||||||||||    
T  257836 tttcagtcttcaaatcaatgatcctcgtctatgtttgcataagaatataagatttgaagcttg 257898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Original strand, 323576 - 323619
Alignment:
Q  123 gatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  323576 gatcctcgtctatgtttgcataagaatattagatttgaagcttg 323619  T

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Target: scaffold0077 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 10089 - 10027
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    |||||||||| |||||||||||  | ||||||||||| ||||||||| |||||||||||||||    
T  10089 tttcaatcttcaaatctatgatacttgtctatgtttgtataagaatactagatttgaagcttg 10027  T

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Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 73517 - 73579
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagcttg 166  Q
    ||||| |||| |||| ||||||| || ||||||||||||||| ||||||||||||||||||||    
T  73517 tttcagtcttcaaatatatgatcctcttctatgtttgcataataatattagatttgaagcttg 73579  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 45014 - 45065
Alignment:
Q  104 tttcaatctttaaatctatgatcttcgtctatgtttgcataagaatattagat 156  Q
    |||||||||| ||||||| |||| |||||||| ||||||||||||||||||||    
T  45014 tttcaatcttcaaatctacgatcctcgtctat-tttgcataagaatattagat 45065  T

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