View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_101 (Length: 246)
Name: NF17063_low_101
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_101 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 42066590 - 42066393
Alignment:
| Q |
31 |
ctaacatttcttggtaatcaaacattttccaatataaaaatgtgcacctacctatataaccgaaaccaagaccaaatgaggagtagcaagctagtaggag |
130 |
Q |
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| T |
42066590 |
ctaacatttcttggtaatcaaacattttccaatataaaaatgtgcacctacctatataaccgaaaccaagaccaaatgaggagtagcaagctagtaggag |
42066491 |
T |
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| Q |
131 |
ggagagaggtggagtgtgttccaagacacaatgattacatggtcttggggaagcagaaagggtagctagcaaagatttagaataacgtgggaggcttg |
228 |
Q |
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| T |
42066490 |
ggagagaggtggagtgtgttccaagacacaatgattacatggtcttggggaagcagaaagggtagctagcaaagatttagaataacgtgggaggcttg |
42066393 |
T |
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