View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_119 (Length: 232)
Name: NF17063_low_119
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_119 |
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Alignment Details
Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 49554959 - 49555099
Alignment:
| Q |
17 |
atgtggatttttactaaaatgtcagttcaacccataaatattaagcttatagccgaacaggtttttgatcaacttcatttcttatcttcacaaagctttg |
116 |
Q |
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| T |
49554959 |
atgtggatttttactaaaatgtcagttgaacccataaatatcaagcttatagccgaacaggtttttgatcaacttcatttcttatcttcacaaagctttg |
49555058 |
T |
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| Q |
117 |
tgaaaaattatcatggaataggaaacaaccagccaatgatt |
157 |
Q |
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| T |
49555059 |
tgaaaaattatcatggaataggaaacaaccagccaatgatt |
49555099 |
T |
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