View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_132 (Length: 203)
Name: NF17063_low_132
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_132 |
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Alignment Details
Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 47707154 - 47706994
Alignment:
| Q |
20 |
atatctgagcatgaattgaacaaggtggagctgctagcagttgagaaacgatctgtttcaataggtgtttgatcaacgttgttagcttcgtgttcgtgag |
119 |
Q |
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| T |
47707154 |
atatctgagcatgaattgaacaaggtggagctgctagcagttgagaaacgatctgtttcaataggtgcttgatcaacgttgttagcttcgtgttcgtgag |
47707055 |
T |
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| Q |
120 |
tgacagtgacagtaacgttggcatgttggtttgtaatgttggagtcattggttgttgtaac |
180 |
Q |
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| T |
47707054 |
tgacagtgacagcaacgttggcatgttggtttgtaatgttggagtcattggttgttgtaac |
47706994 |
T |
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