View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17063_low_40 (Length: 423)

Name: NF17063_low_40
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17063_low_40
NF17063_low_40
[»] chr1 (8 HSPs)
chr1 (8-409)||(49540034-49540437)
chr1 (8-144)||(49287520-49287659)
chr1 (252-365)||(6394816-6394930)
chr1 (287-354)||(6396664-6396731)
chr1 (52-102)||(37847378-37847428)
chr1 (306-379)||(26778588-26778661)
chr1 (61-148)||(41186213-41186300)
chr1 (76-150)||(47874086-47874159)
[»] chr4 (5 HSPs)
chr4 (228-381)||(46867209-46867362)
chr4 (240-355)||(51537051-51537165)
chr4 (268-381)||(20447390-20447503)
chr4 (252-381)||(46869050-46869179)
chr4 (283-336)||(16059703-16059756)
[»] chr8 (2 HSPs)
chr8 (228-339)||(45100221-45100332)
chr8 (226-381)||(7001252-7001407)
[»] chr7 (3 HSPs)
chr7 (252-372)||(47304387-47304507)
chr7 (269-334)||(32841476-32841541)
chr7 (311-376)||(31544709-31544774)
[»] scaffold0426 (1 HSPs)
scaffold0426 (252-380)||(4734-4862)
[»] scaffold0037 (1 HSPs)
scaffold0037 (228-368)||(34262-34402)
[»] chr3 (1 HSPs)
chr3 (288-380)||(1542330-1542422)
[»] chr2 (1 HSPs)
chr2 (227-319)||(14223044-14223136)
[»] chr5 (3 HSPs)
chr5 (293-368)||(23136666-23136741)
chr5 (228-298)||(2735103-2735173)
chr5 (228-302)||(14575026-14575099)
[»] chr6 (1 HSPs)
chr6 (228-369)||(10428200-10428341)


Alignment Details
Target: chr1 (Bit Score: 365; Significance: 0; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 8 - 409
Target Start/End: Complemental strand, 49540437 - 49540034
Alignment:
Q  8 ggtagattattctctagttgtgtgactggcacattatacactg--ctactcgtggtctttgtgtttcgatctatttcatttttgtttgccaataattagg 105  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49540437 ggtagattattctctagttgtgtgactggcacattatacactgtgctactcgtggtctttgtgtttcggtctatttcatttttgtttgccaataattagg 49540338  T
Q  106 caatagaaggaaaaactttcaatggtttgtagtttcaatattagatagatattagataaaataaagaactgaaatcattaattagtatcaagaataattc 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49540337 caatagaaggaaaaactttcaatggtttgtagtttcaatattagacagatattagataaaataaagaactgaaatcattaattagtatcgagaataattc 49540238  T
Q  206 agatgtgtatcagaattgaatggagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaa 305  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49540237 agatgtgtatcagaattgaatggagtgaataggcctttccgttcttaaatttgtatgcaccggtcaattgcatcccccaatattttgaaatagccaacaa 49540138  T
Q  306 gtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtgtcacgctgacttggaagtcattcttaaat 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49540137 gtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgccgttaacagtgctgatgtgtcacgctgacttggaagtaattcttaaat 49540038  T
Q  406 ttga 409  Q
    ||||    
T  49540037 ttga 49540034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 49287520 - 49287659
Alignment:
Q  8 ggtagattattctctagttgtgtgactggcacattatacac--tgctactcgtggtctttgtgtttcgatctatttcatttttgtttgccaataattagg 105  Q
    |||||||||||| ||||||| |||||| | | |||||||||  || ||||   |||||||||||||||||||||||| ||| ||||||||||||||| |     
T  49287520 ggtagattattccctagttgagtgacttggatattatacaccgtgttacttcgggtctttgtgtttcgatctatttcctttctgtttgccaataatttga 49287619  T
Q  106 caatagaaggaaaaacttt-caatggtttgtagtttcaat 144  Q
    ||| || | |||||||||| ||||||||||||||||||||    
T  49287620 caaaagtaagaaaaactttgcaatggtttgtagtttcaat 49287659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 6394816 - 6394930
Alignment:
Q  252 aaatttgtatgcaccggtcaattgcatcccccaatttttt-gaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaa 350  Q
    ||||||||||| | | ||||||| |||| ||  ||||||| ||||||||  | | |||| |||||||||||||||||||||||||||||| ||| |||||    
T  6394816 aaatttgtatgtatccgtcaatttcatcacctgattttttcgaaatagcttatatgtccgtgaattttataaatgtcaatcaatttagtccttccatcaa 6394915  T
Q  351 gtctcgtcgttaaca 365  Q
    |||||||||||||||    
T  6394916 gtctcgtcgttaaca 6394930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 287 - 354
Target Start/End: Complemental strand, 6396731 - 6396664
Alignment:
Q  287 tttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaagtct 354  Q
    ||||| |||||||||||  ||| || ||||||||||||||||||||||||||||  || |||||||||    
T  6396731 tttttaaaatagccaacgcgtctctcaattttataaatgtcaatcaatttagtctctccatcaagtct 6396664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 37847378 - 37847428
Alignment:
Q  52 tactcgtggtctttgtgtttcgatctatttcatttttgtttgccaataatt 102  Q
    |||| |||||||||||||||  ||| |||||||||||||||||||||||||    
T  37847378 tacttgtggtctttgtgtttgcatccatttcatttttgtttgccaataatt 37847428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 379
Target Start/End: Original strand, 26778588 - 26778661
Alignment:
Q  306 gtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtgtca 379  Q
    |||||||||||||||||| ||||||||||||||||  ||  ||||||||||  ||||||| || |||| |||||    
T  26778588 gtccctgaattttataaacgtcaatcaatttagtctctccgtcaagtctcgcagttaacaatgttgatatgtca 26778661  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 41186213 - 41186300
Alignment:
Q  61 tctttgtgtttcgatctatttcatttttgtttgccaataattaggcaatagaaggaaaaactttcaatggtttgtagtttcaatatta 148  Q
    ||||||||||| ||  |||||| ||||||||||||||||||| | | |  | || |||||||||  ||||||| ||||||||||||||    
T  41186213 tctttgtgttttgacatatttcctttttgtttgccaataatttgactaatgtagaaaaaacttttgatggtttatagtttcaatatta 41186300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 47874086 - 47874159
Alignment:
Q  76 ctatttcatttttgtttgccaataattaggcaatagaaggaaaaactttcaatggtttgtagtttcaatattaga 150  Q
    ||||||| |||||||||||||| |||| | | | || |||||||||||   ||||||||||||||||||||||||    
T  47874086 ctatttcctttttgtttgccaa-aattggactagagtaggaaaaacttgttatggtttgtagtttcaatattaga 47874159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 228 - 381
Target Start/End: Original strand, 46867209 - 46867362
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtc 327  Q
    |||||||||||  |||| || ||||||||||||| || |||| ||||  ||| | |||||||| |||||||| |||| |||| | |||||||||||||||    
T  46867209 gagtgaataggtattttggtccttaaatttgtatacatcggttaattttatctctcaatttttcgaaatagcaaacacgtccttaaattttataaatgtc 46867308  T
Q  328 aatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtgtcacg 381  Q
    |||||||||||||  |  ||||||||| | |||||||| ||||||| |||||||    
T  46867309 aatcaatttagtcccttcatcaagtcttgccgttaacaatgctgatatgtcacg 46867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 51537051 - 51537165
Alignment:
Q  240 cttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagt 339  Q
    ||||||||  |||||||||||||||||| |||||| |||||  |||||||  |||||||  || | || | ||||||||||| |||||||||||||||||    
T  51537051 cttttcgtctttaaatttgtatgcaccgatcaatttcatccttcaatttta-gaaatagttaatacgttcttgaattttatagatgtcaatcaatttagt 51537149  T
Q  340 cattctatcaagtctc 355  Q
    |  |||||||||||||    
T  51537150 ccatctatcaagtctc 51537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 381
Target Start/End: Complemental strand, 20447503 - 20447390
Alignment:
Q  268 gtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagt 367  Q
    ||||||| |||||| ||||||||  ||||||| || | |||||||||| ||||||||||||||||||||||||  |   |||||||||  ||||||| ||    
T  20447503 gtcaatttcatccctcaatttttcaaaatagcaaatatgtccctgaatcttataaatgtcaatcaatttagtctcttcgtcaagtctcaccgttaaccgt 20447404  T
Q  368 gctgatgtgtcacg 381  Q
    ||||| || |||||    
T  20447403 gctgacgtttcacg 20447390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 381
Target Start/End: Complemental strand, 46869179 - 46869050
Alignment:
Q  252 aaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaag 351  Q
    |||||| ||||||| | |||||| |||||   |||||||  ||||||| || | |||  |||||||||||||||||||||||||||||  |||| ||||     
T  46869179 aaatttatatgcacagctcaatttcatcctttaatttttcaaaatagcaaataggtcattgaattttataaatgtcaatcaatttagtttttctgtcaaa 46869080  T
Q  352 tctcgtcgttaacagtgctgatgtgtcacg 381  Q
    |||  |||||||||||| |||  |||||||    
T  46869079 tctaatcgttaacagtgttgacatgtcacg 46869050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 16059756 - 16059703
Alignment:
Q  283 caattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaattt 336  Q
    |||||| |||||||||| || ||||||||  |||| ||||||||||||||||||    
T  16059756 caatttgttgaaatagctaataagtccctatatttgataaatgtcaatcaattt 16059703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 45100332 - 45100221
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtc 327  Q
    ||||||||| |  ||||| | |||||||||||||||||||||||||||||||||| |||| || ||||||||||| |  | |||||||||||| |||| |    
T  45100332 gagtgaatatgttttttcctccttaaatttgtatgcaccggtcaattgcatccccaaattattcgaaatagccaatatattcctgaattttatgaatgac 45100233  T
Q  328 aatcaatttagt 339  Q
    ||||||||||||    
T  45100232 aatcaatttagt 45100221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 226 - 381
Target Start/End: Complemental strand, 7001407 - 7001252
Alignment:
Q  226 tggagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatg 325  Q
    |||||||||||||| |||| ||  | ||||||||||||| | |||||||  |||||  ||||||||||| |||| || | || |||||||||||||||||    
T  7001407 tggagtgaataggcattttggtcttcaaatttgtatgcatcagtcaatttgatccctaaattttttgaattagcaaatacgttcctgaattttataaatg 7001308  T
Q  326 tcaatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtgtcacg 381  Q
    | |||||||||||||  |  |||||||| |  |||||| |||| | ||||||||||    
T  7001307 ttaatcaatttagtctcttcatcaagtcccaccgttaagagtgttaatgtgtcacg 7001252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 252 - 372
Target Start/End: Complemental strand, 47304507 - 47304387
Alignment:
Q  252 aaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaag 351  Q
    ||||||| ||||| |||| |||| |||||| |||||||| ||||||||||| | |||  ||||  |||||||| ||||||| |||||||  || ||||||    
T  47304507 aaatttgcatgcatcggttaatttcatccctcaatttttcgaaatagccaatacgtctttgaaacttataaatatcaatcattttagtccctccatcaag 47304408  T
Q  352 tctcgtcgttaacagtgctga 372  Q
    |||||||||||||||||||||    
T  47304407 tctcgtcgttaacagtgctga 47304387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 269 - 334
Target Start/End: Complemental strand, 32841541 - 32841476
Alignment:
Q  269 tcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaat 334  Q
    |||||| | ||||||||||| | |||||||||||  | ||||||||||| ||||||||||||||||    
T  32841541 tcaatttcgtcccccaatttgtcgaaatagccaattaatccctgaatttgataaatgtcaatcaat 32841476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 31544709 - 31544774
Alignment:
Q  311 tgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtg 376  Q
    ||||||||||||   |||||||||||||| ||||| ||||||||||  ||||||  ||||||||||    
T  31544709 tgaattttataatgttcaatcaatttagttattctgtcaagtctcgctgttaacgatgctgatgtg 31544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 380
Target Start/End: Complemental strand, 4862 - 4734
Alignment:
Q  252 aaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaag 351  Q
    |||||||||||  |  ||||||| |||||| |||||||| ||||||||||| | |||  || |||||||||||||| |||||||||||   ||| |||||    
T  4862 aaatttgtatgtgcacgtcaatttcatccctcaatttttcgaaatagccaatacgtcattggattttataaatgtccatcaatttagtttgtctgtcaag 4763  T
Q  352 tctcgtcgttaacagtgctgatgtgtcac 380  Q
    |||||||||||||| |||| | |||||||    
T  4762 tctcgtcgttaacaatgctaacgtgtcac 4734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 368
Target Start/End: Original strand, 34262 - 34402
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtc 327  Q
    |||||||||||| ||| | | ||| |||||| ||||||| ||||||| ||||| |  |||  | |||||||  || | ||||||||||||||  ||  ||    
T  34262 gagtgaataggcttttccatccttcaatttgcatgcaccagtcaatttcatcctcagattaatcgaaatagttaatacgtccctgaattttaccaagttc 34361  T
Q  328 aatcaatttagtcattctatcaagtctcgtcgttaacagtg 368  Q
    |||||||||||||  ||||||||||||| ||||||| ||||    
T  34362 aatcaatttagtctctctatcaagtctcatcgttaatagtg 34402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 380
Target Start/End: Complemental strand, 1542422 - 1542330
Alignment:
Q  288 ttttgaaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagtgctgatgtgtcac 380  Q
    ||||||||||| ||| | |||||| |||||||| ||||||| ||||||||||| |||||| ||||||   |||||||| || || ||||||||    
T  1542422 ttttgaaatagtcaatacgtccctaaattttatgaatgtcagtcaatttagtccttctattaagtctttccgttaacaatgttggtgtgtcac 1542330  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 319
Target Start/End: Complemental strand, 14223136 - 14223044
Alignment:
Q  227 ggagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaatttta 319  Q
    |||||||||| || ||||||| ||| |||||||||||||||| ||||| | ||| | |||| || |||||||| || | |||| |||||||||    
T  14223136 ggagtgaataagctttttcgtccttcaatttgtatgcaccggacaatttcgtcctcaaattattcgaaatagctaaaatgtccatgaatttta 14223044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 368
Target Start/End: Original strand, 23136666 - 23136741
Alignment:
Q  293 aaatagccaacaagtccctgaattttataaatgtcaatcaatttagtcattctatcaagtctcgtcgttaacagtg 368  Q
    ||||||| || | ||| ||||||||||||||||||||| | ||||||| |||  ||||||||| || |||||||||    
T  23136666 aaatagcaaatacgtctctgaattttataaatgtcaataagtttagtctttccgtcaagtctcatcattaacagtg 23136741  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 298
Target Start/End: Original strand, 2735103 - 2735173
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatag 298  Q
    |||||||||||  |||| || ||| |||||||| ||||||||||||| ||| ||  |||||||||||||||    
T  2735103 gagtgaataggtttttttgtcctttaatttgtacgcaccggtcaatttcattcctaaattttttgaaatag 2735173  T

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Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 14575026 - 14575099
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaa 302  Q
    ||||||||||||  |||||| || ||||||||| | | ||||||||| ||||||| ||||||| |||||||||||    
T  14575026 gagtgaataggctatttcgt-ctcaaatttgtacgtatcggtcaatttcatccccaaatttttcgaaatagccaa 14575099  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 369
Target Start/End: Original strand, 10428200 - 10428341
Alignment:
Q  228 gagtgaataggccttttcgttcttaaatttgtatgcaccggtcaattgcatcccccaattttttgaaatagccaacaagtccctgaattttataaatgtc 327  Q
    |||||||||||| ||| | | ||| |||||| |  |||| ||||||| ||||| | ||||  | |||||||  || | ||||||||||||||  ||  ||    
T  10428200 gagtgaataggcttttacatccttcaatttgcacacaccagtcaatttcatccgcaaattaatcgaaatagttaatacgtccctgaattttactaagttc 10428299  T
Q  328 aatcaatttagtcattctatcaagtctcgtcgttaacagtgc 369  Q
    |||||||||||||  ||| ||||||||| ||||||| |||||    
T  10428300 aatcaatttagtctctctgtcaagtctcatcgttaatagtgc 10428341  T

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