View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_46 (Length: 397)
Name: NF17063_low_46
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_46 |
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Alignment Details
Target: chr4 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 11024078 - 11024446
Alignment:
| Q |
14 |
gatgaaggaagaaaagaaaggaatgttgattaaaggatgggttccacaagcgttaatattggatcatccatcgataggcggattcttaacgcattgtggc |
113 |
Q |
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| T |
11024078 |
gatgaaggaagaaaagaaaggaatgttgattaaaggatgggttccacaagcgttaatattggatcatccatcgataggcggattcttaacgcattgtggc |
11024177 |
T |
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| Q |
114 |
tggaacgcgaccgtggaagcaataagttccggagtaccaatggttacaatgcccggattcggggatcaatattacaacgagaaattggtgactgaggtgc |
213 |
Q |
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| T |
11024178 |
tggaacgcgaccgtggaagcaataagttccggagtaccaatggttacaatgcccggattcggggatcaatattacaacgagaaattggtgactgaggtgc |
11024277 |
T |
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| Q |
214 |
atcgcattggcgtggaagttggcgccgcagagtggagcatgtcgccttatgatgctaagaagacagtggtgagagctgaaaggatagagaaagctgtgaa |
313 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11024278 |
atcgcattggcgtggaagttggcgccgcggagtggagcatgtcgccttatgatgctaagaagacagtggtgagagctgaaaggatagagaaagctgtgaa |
11024377 |
T |
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| Q |
314 |
gaaattgatggatagtaatggtgaaggtggagaaataagaaaaagggctaaagaaatgaaagagaaagc |
382 |
Q |
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| T |
11024378 |
gaaattgatggatagtaatggtgaaggtggagaaataagaaaaagggctaaagaaatgaaagagaaagc |
11024446 |
T |
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