View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_58 (Length: 356)
Name: NF17063_low_58
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 15 - 346
Target Start/End: Original strand, 32012703 - 32013029
Alignment:
| Q |
15 |
cattatttgcgtccatagttgagatgccacaacccatgatgtatataaggactaggaattacgaaaagatcaaattaggagggtaaagagaattgaagaa |
114 |
Q |
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| T |
32012703 |
cattatttgagtccatagttgagatgccacaacccatgatgtatataaggactaggaattacgaaaagatcaaattaggagggtaaagagaattgaagaa |
32012802 |
T |
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| Q |
115 |
ttgggttaacaataataatagggattgtgaatgcgacatattataacattaacaatatatattaaaaaagaaaacacagagtaacaaagattttgttaat |
214 |
Q |
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| T |
32012803 |
ttgggttaacaataata---gggattgtgaatgcgacatatta--acattaacaatatatattaaaaaagaaaaaacagaataacaaagattttgttaat |
32012897 |
T |
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| Q |
215 |
taatgagaatgatggttagggttttgtgattgcaatgcaatgtgtgagcttgcatgtttgttttgctgtgtaattatctgataattttctgagtgtatat |
314 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32012898 |
taatgagaatgatggttagggttttgtgtttgcaatgcaatgtgtgagcttgcatgtttgttttgctgtgtaattatctgctaattttctgagtgtatat |
32012997 |
T |
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| Q |
315 |
catgcatatggtttattggcctcatcttcatc |
346 |
Q |
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| T |
32012998 |
catgcatatggtttattggcctcatcttcatc |
32013029 |
T |
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