View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17063_low_7 (Length: 666)

Name: NF17063_low_7
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17063_low_7
NF17063_low_7
[»] chr5 (9 HSPs)
chr5 (10-648)||(11640541-11641179)
chr5 (10-543)||(11622153-11622688)
chr5 (139-402)||(11604902-11605165)
chr5 (409-492)||(12686617-12686700)
chr5 (409-492)||(12692719-12692802)
chr5 (409-492)||(32094660-32094743)
chr5 (409-487)||(19060217-19060295)
chr5 (409-470)||(20499776-20499837)
chr5 (429-487)||(22647931-22647989)
[»] chr8 (9 HSPs)
chr8 (409-492)||(9934921-9935004)
chr8 (409-492)||(32896650-32896733)
chr8 (409-496)||(5542596-5542683)
chr8 (409-492)||(32890526-32890609)
chr8 (409-492)||(36818610-36818693)
chr8 (409-492)||(42993438-42993521)
chr8 (409-507)||(10705476-10705573)
chr8 (409-507)||(42033435-42033532)
chr8 (409-507)||(10699667-10699764)
[»] scaffold0208 (2 HSPs)
scaffold0208 (409-492)||(12033-12116)
scaffold0208 (440-492)||(6191-6243)
[»] chr7 (2 HSPs)
chr7 (409-492)||(28421397-28421480)
chr7 (440-492)||(5979614-5979666)
[»] chr6 (5 HSPs)
chr6 (409-492)||(4580760-4580843)
chr6 (409-496)||(21191305-21191392)
chr6 (409-484)||(25353851-25353926)
chr6 (409-487)||(12801982-12802060)
chr6 (409-507)||(21770989-21771086)
[»] chr3 (9 HSPs)
chr3 (409-492)||(11840164-11840247)
chr3 (409-492)||(26429856-26429939)
chr3 (409-492)||(42191659-42191742)
chr3 (409-492)||(42197601-42197684)
chr3 (439-507)||(46656348-46656415)
chr3 (409-492)||(10238651-10238734)
chr3 (409-492)||(10244773-10244856)
chr3 (409-492)||(17056230-17056313)
chr3 (409-492)||(17601972-17602055)
[»] chr2 (8 HSPs)
chr2 (409-492)||(13455737-13455820)
chr2 (409-492)||(13461678-13461761)
chr2 (409-492)||(35085118-35085201)
chr2 (409-492)||(35091091-35091174)
chr2 (409-492)||(36750052-36750135)
chr2 (409-507)||(7771611-7771708)
chr2 (409-479)||(23283881-23283951)
chr2 (409-487)||(23343201-23343279)
[»] chr1 (9 HSPs)
chr1 (409-492)||(25275485-25275568)
chr1 (409-492)||(25381974-25382057)
chr1 (409-492)||(50305835-50305918)
chr1 (409-507)||(27954799-27954896)
chr1 (409-492)||(1077882-1077965)
chr1 (409-467)||(24927232-24927290)
chr1 (409-487)||(24964148-24964226)
chr1 (440-492)||(25387941-25387993)
chr1 (409-507)||(44409638-44409735)
[»] chr4 (6 HSPs)
chr4 (409-507)||(6257629-6257726)
chr4 (409-492)||(24287625-24287708)
chr4 (409-507)||(26971979-26972076)
chr4 (409-484)||(49976239-49976314)
chr4 (409-487)||(4632013-4632091)
chr4 (409-507)||(50168233-50168330)


Alignment Details
Target: chr5 (Bit Score: 615; Significance: 0; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 615; E-Value: 0
Query Start/End: Original strand, 10 - 648
Target Start/End: Complemental strand, 11641179 - 11640541
Alignment:
Q  10 acatcatcaagcacaattaggtacctgcttctctgaagcaaatccttaatcaactctttcagcttgtcacttttcatcctttcaactgcttctggaactg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11641179 acatcatcaagcacaattaggtacctgcttctctgaagcaaatccttaatcaactctttcagcttgtcacttttcatcctttcaactgcttctggaactg 11641080  T
Q  110 gttttccgatgagaatatgaatctgttcaacaaggtctttaagcaactcttccattttgaaagattgagagagattaacccaagcatgaatcctaaaacg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11641079 gttttccgatgagaatatgaatctgttcaacaaggtctttaagcaactcttccattttgaaagattgagagagattaacccaagcatgaatcctaaaacg 11640980  T
Q  210 cttcttgacttttggatcatcatagacttgttttgctattgttgtcttccctaaacctcccataccataaatggaaatcactgccctatttgattcatct 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11640979 cttcttgacttttggatcatcatagacttgttttgctattgttgtcttccctaaacctcccataccataaatggaaatcacagccctatttgattcatct 11640880  T
Q  310 ttgaaaagcaaatcacagagctgcttctttggttgttcaattccaactaaatcagcttcctccagcaaaagggcatcacctgttggaatatttatttaaa 409  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11640879 ttgaaaagcaaatcacagagctgcttctttggatgttcaattccaactaaatcagcttcctccagcaaaagggcatcacctgttggaatatttatttaaa 11640780  T
Q  410 attataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaataac 509  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11640779 attataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttaataatgaattaaataac 11640680  T
Q  510 tagtttatatggattcaaatatgagtgaatattactaatgtgatgtcttggaataacagaaacacaattggccatcacttaatatataggctatgatatc 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11640679 tagtttatatggattcaaatatgagtgaatattactaatgtgatgtcttggaataacagaaccacaattggccatcacttaatatataggctatgatatc 11640580  T
Q  610 caatatactggaaataatgcaccttccttgcctcttatc 648  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  11640579 caatataatggaaataatgcaccttccttgcctcttatc 11640541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 10 - 543
Target Start/End: Complemental strand, 11622688 - 11622153
Alignment:
Q  10 acatcatcaagcacaattaggtacctgcttctctgaagcaaatccttaatcaactctttcagcttgtcacttttcatcctttcaactgcttctggaactg 109  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||| | |||| | |||||| || ||| || | ||||| | |    
T  11622688 acatcatcaagaacaattagatacctgcttctctgaagcaaattctttatcaactctttcagatcgtcattattcatcgttccaattgatcctggagcag 11622589  T
Q  110 gttttccgatgagaatatgaatctgttcaacaaggtctttaagcaactcttccattttgaaagattgagagagattaacccaagcatgaatcctaaaacg 209  Q
    ||||||| |  | | |||| |  | ||  ||||||||||| || | |||||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  11622588 gttttccaaaaacattatggagtttttgtacaaggtctttcagtatctcttccattttgatagattgggagagattaacccaagcatgaatcctgaaacg 11622489  T
Q  210 cttcttgacttttggatcatcatagacttgttttgctattgttgtcttccctaaacctcccataccataaatggaaatcactgccctatttgattcatct 309  Q
     ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| || ||||||||| | || ||||||||||||    
T  11622488 tttcttgacttttggatcatcataaacttgttttgccaatgttgtcttccctaaacctcccataccatagatcgaaatcacttctctctttgattcatct 11622389  T
Q  310 ttgaaaagcaaatcacagagctgcttctttggttgttcaattccaactaaatcagcttcctccagcaaaagggcatcacctgttggaatatttatttaaa 409  Q
    |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  11622388 ttgaaaagcaaatcagtcagctgcttctttggttgatcaattccaactaaatcagcttcctctagcaaaagggcatcacctgttggagtatatatttaaa 11622289  T
Q  410 attataatagctatttaacaattag-gagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaa-tcaaata 507  Q
    | |||| |||||||||| |||| ||  ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| | || | |||||    
T  11622288 aatatattagctatttatcaatcagaaagttttaattgattaattatcaaactatgtaataaagttaattatatttctaatttgatactaaattaaaata 11622189  T
Q  508 actagtttatatggattcaaatatgagtgaatatta 543  Q
    | |  |||||||||| | || |||||||||||||||    
T  11622188 atttttttatatggactaaagtatgagtgaatatta 11622153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 139 - 402
Target Start/End: Original strand, 11604902 - 11605165
Alignment:
Q  139 acaaggtctttaagcaactcttccattttgaaagattgagagagattaacccaagcatgaatcctaaaacgcttcttgacttttggatcatcatagactt 238  Q
    ||||||||||| || | |||||||||||||| |||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  11604902 acaaggtctttcagtatctcttccattttgatagattgggagagattaacccaagcatgaatcctgaaatgtttcttgacttttggatcatcatagactt 11605001  T
Q  239 gttttgctattgttgtcttccctaaacctcccataccataaatggaaatcactgccctatttgattcatctttgaaaagcaaatcacagagctgcttctt 338  Q
    ||||||| | |||||||||||||||||||||||||||||| || ||||||||| | || |||| |||||| ||||||||||||||||| |||||||||||    
T  11605002 gttttgccaatgttgtcttccctaaacctcccataccatagattgaaatcacttctctctttggttcatcattgaaaagcaaatcacacagctgcttctt 11605101  T
Q  339 tggttgttcaattccaactaaatcagcttcctccagcaaaagggcatcacctgttggaatattt 402  Q
    |||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  11605102 tggttgatcaattccaactaaatcagcttcatctagcaaaagggcatcacctgttggaatattt 11605165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 12686700 - 12686617
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  12686700 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 12686617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 12692802 - 12692719
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  12692802 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 12692719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 32094743 - 32094660
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| || ||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  32094743 aattatattaactatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 32094660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 487
Target Start/End: Complemental strand, 19060295 - 19060217
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    ||||||| |||||||||  ||||| ||||  ||||||||||||| ||||||||| ||||||| ||| |||| |||||||    
T  19060295 aattatattagctatttgtcaatttggagacttaattgattagtgatcaaattaagtaataaggcttattagatttcta 19060217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 409 - 470
Target Start/End: Original strand, 20499776 - 20499837
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataa 470  Q
    ||||||| |||||||||| |||||  |||| ||||||||||||| ||||||||| |||||||    
T  20499776 aattatattagctatttatcaattgtgagtcttaattgattagtgatcaaattaagtaataa 20499837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 487
Target Start/End: Complemental strand, 22647989 - 22647931
Alignment:
Q  429 aattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    |||| ||||| |||||| |||||||||||||||| |||||||  ||||||| |||||||    
T  22647989 aatttggagtcttaattaattagttatcaaattaagtaataagactaattagatttcta 22647931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 9934921 - 9935004
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| ||| |||||| |||||  |||| ||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||    
T  9934921 aattatattagttatttatcaattgtgagtcttaattgattagtgatcaaattaagtaataaagctaattagatttctattttg 9935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 32896650 - 32896733
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  32896650 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 32896733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 5542683 - 5542596
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataa 496  Q
    ||||||| ||| |||||| |||||  |||  ||||||||||||| ||||||||| |||||||  ||||||| |||||||||| |||||    
T  5542683 aattatattagttatttatcaatttagagccttaattgattagtgatcaaattaagtaataagactaattagatttctaattggataa 5542596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 32890526 - 32890609
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  ||   ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  32890526 aattatattagctatttatcaattgtgacccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 32890609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 36818610 - 36818693
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| | |||||| ||||||| ||||    
T  36818610 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggttaattagatttctattttg 36818693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 42993521 - 42993438
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| ||| |||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  42993521 aattatattagttatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 42993438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 10705476 - 10705573
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| |||||||| || |||| ||||||||||  ||||| ||| |||||    
T  10705476 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaaact-attagatttctaattgaataattaattaaata 10705573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 42033435 - 42033532
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||| ||| | |||| |||||||||| |||||| ||| |||||    
T  42033435 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaat-aaggttattagatttctaattagataattaattaaata 42033532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 10699667 - 10699764
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| ||| |||||| |||||  |||  ||||||||||||| ||||||||| ||||| | ||| |||| |||||||||| |||||| ||| |||||    
T  10699667 aattatactagttatttatcaattgtgagccttaattgattagtgatcaaattaagtaattaggct-attagatttctaattggataattaattaaata 10699764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 12033 - 12116
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  12033 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 12116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 492
Target Start/End: Original strand, 6191 - 6243
Alignment:
Q  440 ttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  6191 ttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 28421480 - 28421397
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  28421480 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 28421397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 492
Target Start/End: Complemental strand, 5979666 - 5979614
Alignment:
Q  440 ttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  5979666 ttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 5979614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 4580843 - 4580760
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  4580843 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 4580760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 496
Target Start/End: Complemental strand, 21191392 - 21191305
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataa 496  Q
    ||||||| ||| |||||| |||||  |||  ||||||||||||| ||||||||| ||||||  |||||||| |||||||||| |||||    
T  21191392 aattatattagttatttatcaatttagagccttaattgattagtgatcaaattaagtaatatggctaattagatttctaattggataa 21191305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 484
Target Start/End: Original strand, 25353851 - 25353926
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatattt 484  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  25353851 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagattt 25353926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 487
Target Start/End: Complemental strand, 12802060 - 12801982
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    ||||||| |||||||||  ||||| ||||  ||||||||||||| ||||| ||| ||||||||||| |||| |||||||    
T  12802060 aattatattagctatttgtcaatttggagccttaattgattagtgatcaatttaagtaataaagcttattagatttcta 12801982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 21771086 - 21770989
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| |||||||| || |||| ||||||||||  ||||| ||| |||||    
T  21771086 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaaact-attagatttctaattgaataattaattaaata 21770989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 11840247 - 11840164
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  11840247 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 11840164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 26429939 - 26429856
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  26429939 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 26429856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 42191742 - 42191659
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  42191742 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 42191659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 42197684 - 42197601
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  42197684 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 42197601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 507
Target Start/End: Original strand, 46656348 - 46656415
Alignment:
Q  439 tttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    |||||||||||||| ||||||||| ||||||||||| |||| |||||||||| |||||| ||| |||||    
T  46656348 tttaattgattagtgatcaaattaagtaataaagct-attagatttctaattggataattaattaaata 46656415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 10238734 - 10238651
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  |||||||||||||  |||||||| ||||||| |||||||| ||||||| ||||    
T  10238734 aattatattagctatttatcaattgtgagccttaattgattagtgttcaaattaagtaataaggctaattagatttctattttg 10238651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 10244856 - 10244773
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  |||||||||||||  |||||||| ||||||| |||||||| ||||||| ||||    
T  10244856 aattatattagctatttatcaattgtgagccttaattgattagtgttcaaattaagtaataaggctaattagatttctattttg 10244773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 17056313 - 17056230
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| || ||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  17056313 aattatattatctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 17056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 17602055 - 17601972
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| ||| |||||| |||||  |||  |||||||||||||  |||||||| ||||||| |||||||| ||||||| ||||    
T  17602055 aattatattagttatttatcaatttagagccttaattgattagtggtcaaattaagtaataaggctaattagatttctattttg 17601972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 13455737 - 13455820
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  13455737 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 13455820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 13461678 - 13461761
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  13461678 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 13461761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 35085201 - 35085118
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  35085201 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 35085118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 35091174 - 35091091
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  35091174 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 35091091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 36750052 - 36750135
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  36750052 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 36750135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 7771708 - 7771611
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||   ||| ||| ||||||| | ||||||||| ||||||||||| |||| |||||||||| |||||| ||| |||||    
T  7771708 aattatattagctatttatcaattgtaagtcttagttgattactgatcaaattaagtaataaagct-attagatttctaattggataattaattaaata 7771611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 479
Target Start/End: Original strand, 23283881 - 23283951
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaatta 479  Q
    ||||||| ||| |||||| ||||| ||||| ||||||||||||| ||||||||| ||||||| ||| ||||    
T  23283881 aattatattagttatttatcaatttggagtcttaattgattagtgatcaaattaagtaataaggcttatta 23283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 487
Target Start/End: Original strand, 23343201 - 23343279
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    ||||||| || ||||||| ||||| ||||  ||||||||||||| ||||||||| ||||||| ||| |||| |||||||    
T  23343201 aattatattaactatttatcaatttggagccttaattgattagtgatcaaattaagtaataaggcttattagatttcta 23343279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 25275568 - 25275485
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  25275568 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 25275485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Complemental strand, 25382057 - 25381974
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  25382057 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 25381974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 50305835 - 50305918
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  50305835 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 50305918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 27954799 - 27954896
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| ||| |||||| |||||  |||  ||||||||||||| ||||||||| ||||||| ||| |||| ||||||||||||||||| ||| |||||    
T  27954799 aattatattagttatttatcaattgtgaggcttaattgattagtgatcaaattaagtaataaggct-attagatttctaatttgataattaattaaata 27954896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 1077882 - 1077965
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| ||||||||| |||||||  ||||||| ||||||| ||||    
T  1077882 aattatattagctatttatcaattgtgagccttaattgattagtgatcaaattaagtaataagactaattagatttctattttg 1077965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 24927290 - 24927232
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaa 467  Q
    ||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||| ||||    
T  24927290 aattatattagctatttatcaatttggagtcttaattgattagtgatcaaattaagtaa 24927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 487
Target Start/End: Complemental strand, 24964226 - 24964148
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    ||||||| |||||||||| ||||| | ||  ||||||||||||| ||||||||| ||||||||||| || | |||||||    
T  24964226 aattatattagctatttatcaatttgaagccttaattgattagtgatcaaattaagtaataaagcttataagatttcta 24964148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 492
Target Start/End: Complemental strand, 25387993 - 25387941
Alignment:
Q  440 ttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  25387993 ttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 25387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 44409638 - 44409735
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||  ||||||||||||| || |||||| ||||||| ||| ||||  ||||||||| |||||| ||| |||||    
T  44409638 aattatattagctatttatcaattgtgagccttaattgattagtgattaaattaggtaataaggct-attaggtttctaattggataattaattaaata 44409735  T

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Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 6257726 - 6257629
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||  ||| ||||||||| ||||||||| ||||||||||| |||| |||||||||| |||||| ||| |||||    
T  6257726 aattatattagctatttatcaattgtgagccttagttgattagtgatcaaattaagtaataaagct-attagatttctaattggataattaattaaata 6257629  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 492
Target Start/End: Original strand, 24287625 - 24287708
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttg 492  Q
    ||||||| ||||||||||  ||||  |||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||| ||||    
T  24287625 aattatattagctatttataaattgtgagccttaattgattagtgatcaaattaagtaataaggctaattagatttctattttg 24287708  T

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Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 507
Target Start/End: Complemental strand, 26972076 - 26971979
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||| ||||||||||||| ||||||||| || |||| | | |||| |||||||||| |||||| ||| |||||    
T  26972076 aattatattagctatttatcaattgtgagtcttaattgattagtgatcaaattaagtgataaggat-attagatttctaattggataattaattaaata 26971979  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 484
Target Start/End: Original strand, 49976239 - 49976314
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatattt 484  Q
    ||||||| ||||||||||  |||| ||||  ||||||||||||| ||||||||| ||||||| ||| |||| ||||    
T  49976239 aattatattagctatttattaatttggagccttaattgattagtgatcaaattaagtaataaggcttattagattt 49976314  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 487
Target Start/End: Original strand, 4632013 - 4632091
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttcta 487  Q
    ||||||| ||| |||||| ||||| | ||| ||||||||||||| ||||||||| ||||||| | | |||| |||||||    
T  4632013 aattatattagttatttatcaatttgaagtcttaattgattagtaatcaaattaagtaataaggtttattagatttcta 4632091  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 409 - 507
Target Start/End: Original strand, 50168233 - 50168330
Alignment:
Q  409 aattataatagctatttaacaattaggagttttaattgattagttatcaaattatgtaataaagctaattatatttctaatttgataatgaatcaaata 507  Q
    ||||||| |||||||||| |||||  |||| |||||||||||||  |||||| | |||| || ||| |||| |||||||||| |||||| ||| |||||    
T  50168233 aattatattagctatttatcaattgtgagtcttaattgattagtggtcaaatcaagtaacaaggct-attagatttctaattggataattaattaaata 50168330  T

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