View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17063_low_70 (Length: 326)

Name: NF17063_low_70
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17063_low_70
NF17063_low_70
[»] chr8 (32 HSPs)
chr8 (15-310)||(38874536-38874831)
chr8 (47-189)||(12361113-12361256)
chr8 (118-186)||(10114482-10114550)
chr8 (118-186)||(27028824-27028892)
chr8 (102-189)||(28769345-28769432)
chr8 (102-186)||(8062501-8062585)
chr8 (131-187)||(35220731-35220787)
chr8 (127-186)||(43717946-43718005)
chr8 (57-147)||(4558730-4558820)
chr8 (159-281)||(7008633-7008753)
chr8 (66-147)||(1470904-1470985)
chr8 (112-189)||(11795079-11795156)
chr8 (107-151)||(7514560-7514604)
chr8 (66-145)||(31705025-31705105)
chr8 (64-143)||(787158-787237)
chr8 (102-189)||(30013195-30013282)
chr8 (127-186)||(30251463-30251522)
chr8 (112-155)||(35869824-35869867)
chr8 (105-147)||(9834837-9834879)
chr8 (135-193)||(21653091-21653149)
chr8 (65-147)||(31884534-31884616)
chr8 (89-147)||(34770856-34770914)
chr8 (118-186)||(2482858-2482924)
chr8 (102-147)||(6509351-6509396)
chr8 (101-146)||(7645954-7645999)
chr8 (112-177)||(9956832-9956897)
chr8 (46-119)||(14949809-14949882)
chr8 (69-186)||(31862437-31862554)
chr8 (55-144)||(42597331-42597420)
chr8 (131-184)||(44236834-44236887)
chr8 (121-217)||(6966881-6966976)
chr8 (236-280)||(31884856-31884900)
[»] chr5 (43 HSPs)
chr5 (64-186)||(39105403-39105525)
chr5 (64-265)||(32172592-32172792)
chr5 (64-186)||(9202757-9202879)
chr5 (49-142)||(32059642-32059734)
chr5 (127-186)||(4014433-4014492)
chr5 (89-170)||(12425535-12425616)
chr5 (55-148)||(18704083-18704175)
chr5 (112-180)||(28776980-28777048)
chr5 (65-193)||(36796708-36796836)
chr5 (112-186)||(2568645-2568719)
chr5 (106-172)||(7319387-7319453)
chr5 (102-172)||(35553211-35553281)
chr5 (131-217)||(41052874-41052959)
chr5 (121-186)||(7984965-7985030)
chr5 (89-214)||(10272413-10272537)
chr5 (104-153)||(12975326-12975375)
chr5 (78-147)||(14295459-14295528)
chr5 (64-147)||(26209461-26209543)
chr5 (112-185)||(37588370-37588443)
chr5 (106-186)||(1619071-1619150)
chr5 (55-148)||(35135713-35135802)
chr5 (118-186)||(41981874-41981942)
chr5 (107-186)||(6587116-6587195)
chr5 (70-149)||(9703286-9703365)
chr5 (159-278)||(11297114-11297232)
chr5 (222-277)||(36326104-36326159)
chr5 (64-147)||(38047903-38047986)
chr5 (106-189)||(41957457-41957540)
chr5 (119-161)||(4620187-4620229)
chr5 (131-189)||(7319014-7319072)
chr5 (239-277)||(9174929-9174967)
chr5 (132-186)||(10639960-10640014)
chr5 (127-177)||(24030419-24030469)
chr5 (179-264)||(11457152-11457236)
chr5 (238-279)||(16937800-16937841)
chr5 (102-147)||(34205216-34205261)
chr5 (112-185)||(37526209-37526282)
chr5 (65-185)||(37690646-37690767)
chr5 (118-183)||(40119880-40119945)
chr5 (236-280)||(6938649-6938693)
chr5 (104-148)||(19138766-19138810)
chr5 (118-166)||(32942611-32942659)
chr5 (127-195)||(42582914-42582982)
[»] chr7 (42 HSPs)
chr7 (89-186)||(40688995-40689092)
chr7 (105-201)||(38010694-38010790)
chr7 (106-182)||(47177617-47177693)
chr7 (46-172)||(27548184-27548310)
chr7 (63-241)||(48157075-48157252)
chr7 (127-184)||(20526448-20526505)
chr7 (102-177)||(12110337-12110412)
chr7 (64-186)||(28165030-28165152)
chr7 (57-183)||(39505889-39506014)
chr7 (112-186)||(47510116-47510190)
chr7 (78-147)||(21453247-21453316)
chr7 (112-176)||(6263382-6263446)
chr7 (102-170)||(44821936-44822004)
chr7 (236-279)||(24363517-24363560)
chr7 (127-186)||(48470046-48470105)
chr7 (102-147)||(28340892-28340937)
chr7 (26-82)||(38713202-38713258)
chr7 (49-141)||(49060464-49060556)
chr7 (118-185)||(752962-753029)
chr7 (48-147)||(991993-992092)
chr7 (63-146)||(1417202-1417285)
chr7 (102-153)||(24909641-24909692)
chr7 (26-148)||(25507252-25507372)
chr7 (127-170)||(43648242-43648285)
chr7 (118-177)||(45790443-45790502)
chr7 (127-189)||(6601369-6601431)
chr7 (55-169)||(27481320-27481434)
chr7 (127-185)||(33128755-33128813)
chr7 (102-147)||(5369739-5369784)
chr7 (121-170)||(33678776-33678825)
chr7 (103-148)||(39518807-39518852)
chr7 (118-183)||(46280284-46280349)
chr7 (102-215)||(46609074-46609186)
chr7 (89-177)||(46825062-46825151)
chr7 (102-147)||(47046156-47046201)
chr7 (65-189)||(7623078-7623202)
chr7 (89-169)||(30456476-30456556)
chr7 (112-184)||(30535550-30535622)
chr7 (89-145)||(31002725-31002781)
chr7 (234-274)||(32410648-32410688)
chr7 (134-186)||(36517588-36517640)
chr7 (127-167)||(47559629-47559669)
[»] chr3 (45 HSPs)
chr3 (131-264)||(37273140-37273272)
chr3 (134-281)||(45541580-45541726)
chr3 (104-277)||(2923457-2923629)
chr3 (202-278)||(25459548-25459624)
chr3 (132-200)||(33972729-33972797)
chr3 (56-186)||(36783343-36783474)
chr3 (118-185)||(44747418-44747485)
chr3 (119-182)||(50600191-50600254)
chr3 (134-184)||(466202-466252)
chr3 (26-152)||(24235726-24235852)
chr3 (49-147)||(38462205-38462303)
chr3 (65-142)||(1395611-1395688)
chr3 (102-155)||(2201105-2201158)
chr3 (120-189)||(2719463-2719532)
chr3 (139-280)||(4534291-4534431)
chr3 (106-183)||(21367648-21367725)
chr3 (69-186)||(32095200-32095317)
chr3 (112-165)||(33405197-33405250)
chr3 (239-280)||(51929854-51929895)
chr3 (112-188)||(34254815-34254891)
chr3 (106-186)||(52618984-52619064)
chr3 (107-170)||(5436241-5436304)
chr3 (134-189)||(16790384-16790439)
chr3 (58-149)||(37788794-37788884)
chr3 (127-277)||(41633362-41633509)
chr3 (127-197)||(2128256-2128326)
chr3 (106-172)||(14145893-14145959)
chr3 (120-186)||(28622008-28622074)
chr3 (128-170)||(32582747-32582789)
chr3 (26-96)||(41159010-41159080)
chr3 (112-177)||(14548739-14548804)
chr3 (112-153)||(21865563-21865604)
chr3 (112-188)||(25182994-25183071)
chr3 (118-183)||(30443886-30443951)
chr3 (106-151)||(37689428-37689473)
chr3 (48-145)||(43116478-43116575)
chr3 (239-280)||(53762310-53762351)
chr3 (132-188)||(901931-901987)
chr3 (201-277)||(3775770-3775846)
chr3 (107-147)||(20874352-20874392)
chr3 (118-186)||(20880469-20880537)
chr3 (68-195)||(21862175-21862303)
chr3 (103-147)||(21872319-21872363)
chr3 (118-170)||(39602235-39602287)
chr3 (223-287)||(43948751-43948815)
[»] chr2 (54 HSPs)
chr2 (49-277)||(11513825-11514047)
chr2 (106-186)||(18066109-18066189)
chr2 (105-201)||(22681179-22681275)
chr2 (112-264)||(15377752-15377903)
chr2 (112-189)||(18179246-18179323)
chr2 (106-168)||(8017415-8017477)
chr2 (49-147)||(10143096-10143194)
chr2 (102-146)||(29643465-29643509)
chr2 (64-143)||(2416252-2416331)
chr2 (103-189)||(6993730-6993816)
chr2 (222-280)||(15370239-15370297)
chr2 (164-278)||(32821848-32821961)
chr2 (120-173)||(6167305-6167358)
chr2 (27-96)||(10150657-10150726)
chr2 (106-147)||(25800810-25800851)
chr2 (112-185)||(39983329-39983402)
chr2 (68-173)||(41875675-41875780)
chr2 (120-177)||(42457943-42458000)
chr2 (127-179)||(26143656-26143708)
chr2 (106-186)||(26626854-26626934)
chr2 (106-186)||(29316784-29316864)
chr2 (233-281)||(33503105-33503153)
chr2 (118-186)||(40279190-40279258)
chr2 (106-177)||(680484-680555)
chr2 (131-186)||(3611232-3611287)
chr2 (127-186)||(9174817-9174876)
chr2 (106-185)||(9395111-9395190)
chr2 (222-265)||(14302918-14302961)
chr2 (64-147)||(17952749-17952832)
chr2 (118-153)||(33931612-33931647)
chr2 (52-143)||(35755554-35755645)
chr2 (118-177)||(42621393-42621452)
chr2 (236-278)||(10285970-10286012)
chr2 (89-183)||(12464485-12464579)
chr2 (131-185)||(33319822-33319876)
chr2 (127-189)||(40279409-40279471)
chr2 (69-170)||(656802-656903)
chr2 (121-186)||(1893290-1893355)
chr2 (49-122)||(3423841-3423914)
chr2 (104-169)||(13869121-13869186)
chr2 (112-153)||(16353848-16353889)
chr2 (127-184)||(16398116-16398173)
chr2 (66-143)||(23143030-23143107)
chr2 (66-143)||(23554820-23554897)
chr2 (134-215)||(34652017-34652097)
chr2 (129-186)||(35378541-35378598)
chr2 (102-147)||(43141848-43141893)
chr2 (118-186)||(750664-750731)
chr2 (112-188)||(938517-938593)
chr2 (106-186)||(1625881-1625961)
chr2 (102-186)||(28039341-28039425)
chr2 (236-280)||(40759270-40759314)
chr2 (112-144)||(42592326-42592358)
chr2 (240-280)||(42868397-42868437)
[»] chr1 (57 HSPs)
chr1 (104-189)||(4622072-4622157)
chr1 (48-189)||(44032005-44032146)
chr1 (67-146)||(49517012-49517091)
chr1 (63-148)||(48830123-48830208)
chr1 (118-186)||(7137007-7137075)
chr1 (106-186)||(9656631-9656711)
chr1 (102-193)||(7218076-7218167)
chr1 (113-186)||(28482242-28482315)
chr1 (118-186)||(27820346-27820414)
chr1 (118-186)||(34290229-34290297)
chr1 (127-187)||(35179141-35179201)
chr1 (118-186)||(45975683-45975751)
chr1 (106-186)||(51695504-51695584)
chr1 (112-279)||(6231733-6231899)
chr1 (102-153)||(25006076-25006127)
chr1 (113-264)||(31517672-31517822)
chr1 (102-148)||(15361690-15361736)
chr1 (127-172)||(4576807-4576852)
chr1 (89-186)||(16322813-16322910)
chr1 (89-177)||(23544657-23544746)
chr1 (104-189)||(30371127-30371212)
chr1 (127-184)||(39603842-39603899)
chr1 (102-186)||(6292470-6292554)
chr1 (70-186)||(10199417-10199533)
chr1 (222-277)||(12763419-12763475)
chr1 (55-147)||(17269180-17269272)
chr1 (113-189)||(27963376-27963452)
chr1 (112-189)||(28689458-28689537)
chr1 (117-177)||(38867849-38867909)
chr1 (113-184)||(25944420-25944491)
chr1 (134-177)||(38189773-38189816)
chr1 (114-189)||(39270431-39270506)
chr1 (107-182)||(49888749-49888824)
chr1 (119-189)||(2294905-2294975)
chr1 (26-96)||(4202228-4202298)
chr1 (201-275)||(4549462-4549536)
chr1 (130-184)||(16144981-16145035)
chr1 (102-184)||(25005808-25005890)
chr1 (89-147)||(27738228-27738286)
chr1 (84-146)||(28467356-28467418)
chr1 (238-280)||(37631475-37631517)
chr1 (131-185)||(41195203-41195257)
chr1 (102-147)||(1255479-1255524)
chr1 (118-275)||(2777885-2778040)
chr1 (113-186)||(6774976-6775048)
chr1 (134-183)||(7941615-7941664)
chr1 (106-183)||(26630444-26630521)
chr1 (116-177)||(27887136-27887197)
chr1 (86-147)||(33204436-33204497)
chr1 (57-185)||(4200161-4200289)
chr1 (238-278)||(11695974-11696014)
chr1 (58-130)||(15360827-15360899)
chr1 (112-280)||(17420190-17420356)
chr1 (118-186)||(24915060-24915128)
chr1 (69-177)||(25479525-25479633)
chr1 (118-186)||(42174848-42174916)
chr1 (112-172)||(44422686-44422746)
[»] chr6 (36 HSPs)
chr6 (112-189)||(4246397-4246474)
chr6 (110-277)||(7148651-7148817)
chr6 (127-278)||(8010359-8010509)
chr6 (64-186)||(24476541-24476663)
chr6 (26-147)||(281896-282021)
chr6 (64-148)||(29274276-29274360)
chr6 (26-189)||(4006615-4006778)
chr6 (49-143)||(22742290-22742384)
chr6 (64-177)||(9093574-9093687)
chr6 (78-195)||(24782012-24782129)
chr6 (210-283)||(31461756-31461829)
chr6 (55-147)||(32975908-32976000)
chr6 (238-281)||(103542-103585)
chr6 (102-141)||(5550109-5550148)
chr6 (55-122)||(24836272-24836339)
chr6 (28-147)||(27889892-27890010)
chr6 (106-177)||(31671092-31671163)
chr6 (127-186)||(34430470-34430529)
chr6 (127-177)||(835267-835317)
chr6 (134-264)||(2455819-2455948)
chr6 (84-186)||(2735028-2735130)
chr6 (120-186)||(31624085-31624151)
chr6 (49-277)||(8420115-8420343)
chr6 (84-189)||(9667991-9668096)
chr6 (164-197)||(27924601-27924634)
chr6 (120-197)||(28641747-28641824)
chr6 (238-278)||(835179-835219)
chr6 (49-153)||(2206514-2206618)
chr6 (118-186)||(3201956-3202024)
chr6 (134-218)||(4420652-4420735)
chr6 (118-170)||(9109276-9109328)
chr6 (118-154)||(9604842-9604878)
chr6 (236-280)||(12111077-12111121)
chr6 (107-147)||(24838791-24838831)
chr6 (118-182)||(24982698-24982762)
chr6 (138-186)||(31813174-31813222)
[»] chr4 (46 HSPs)
chr4 (64-185)||(6364088-6364209)
chr4 (118-186)||(17822874-17822942)
chr4 (112-276)||(23459615-23459777)
chr4 (89-177)||(42685388-42685476)
chr4 (102-189)||(2996550-2996637)
chr4 (131-264)||(28615529-28615662)
chr4 (55-143)||(8130104-8130192)
chr4 (79-187)||(11802488-11802596)
chr4 (106-185)||(20031730-20031810)
chr4 (119-174)||(942129-942184)
chr4 (112-201)||(9841053-9841141)
chr4 (118-177)||(16199999-16200058)
chr4 (69-144)||(36460530-36460605)
chr4 (68-147)||(49219082-49219161)
chr4 (127-184)||(55302251-55302308)
chr4 (133-177)||(825508-825552)
chr4 (106-190)||(27043835-27043919)
chr4 (34-146)||(30207620-30207731)
chr4 (112-276)||(44319936-44320099)
chr4 (89-177)||(51630075-51630163)
chr4 (78-162)||(53626729-53626813)
chr4 (107-186)||(1706604-1706683)
chr4 (234-277)||(22796763-22796806)
chr4 (64-151)||(24160929-24161016)
chr4 (112-155)||(24444025-24444068)
chr4 (209-264)||(25487489-25487544)
chr4 (106-189)||(40174544-40174627)
chr4 (106-149)||(52754581-52754624)
chr4 (159-278)||(53315360-53315478)
chr4 (45-147)||(23819010-23819111)
chr4 (106-172)||(29778776-29778842)
chr4 (112-170)||(35571656-35571714)
chr4 (78-176)||(52735075-52735173)
chr4 (78-147)||(4071835-4071904)
chr4 (236-277)||(10172172-10172213)
chr4 (102-143)||(24091440-24091481)
chr4 (28-145)||(24160545-24160662)
chr4 (64-169)||(26883934-26884039)
chr4 (48-125)||(30024623-30024700)
chr4 (107-168)||(32421087-32421148)
chr4 (112-185)||(36048520-36048593)
chr4 (127-172)||(52315220-52315265)
chr4 (239-275)||(3637299-3637335)
chr4 (238-278)||(35571549-35571589)
chr4 (63-147)||(35958593-35958677)
chr4 (118-170)||(49202638-49202690)
[»] scaffold0024 (2 HSPs)
scaffold0024 (64-152)||(27515-27603)
scaffold0024 (127-176)||(21304-21353)
[»] scaffold0221 (1 HSPs)
scaffold0221 (127-184)||(22233-22290)
[»] scaffold0100 (1 HSPs)
scaffold0100 (46-148)||(42538-42639)


Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-157; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 15 - 310
Target Start/End: Original strand, 38874536 - 38874831
Alignment:
Q  15 atttatttctgggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttt 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38874536 atttatttctgggatatacaacttaattatgcatttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttt 38874635  T
Q  115 tcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagc 214  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874636 tcatataagctctaagctgttttcataagctattttggagaacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagc 38874735  T
Q  215 tcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtctcattggtctttatgctagtaaat 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874736 tcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtctcattggtctttatgctagtaaat 38874831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 12361113 - 12361256
Alignment:
Q  47 atttatcgtat-aagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagct 145  Q
    ||||||||||| ||||  |||| |||||||| ||||| ||| ||||||||| ||  ||||||||| |||||||||||||| ||||||||||||||||| |    
T  12361113 atttatcgtatgaagtacttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagtt 12361212  T
Q  146 attttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||  ||| | |  ||| ||||||| | |||| |||||||||||    
T  12361213 attcaggagagctaatggaaataagttgaaaacagcttatggac 12361256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 10114482 - 10114550
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||| ||||    
T  10114482 tataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatg 10114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 27028824 - 27028892
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||| ||||||||||||||||||||| ||||| | | |||||||||||||| |||||||||||||    
T  27028824 tatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 28769432 - 28769345
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||| | ||||| |||||||| ||||||||||||||||||||||||||| |   |||| ||||||||| |||| | |||||||||    
T  28769432 agtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatggac 28769345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 8062501 - 8062585
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||| || || |   ||||||||||||||  ||||||||||||    
T  8062501 agtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagcttatg 8062585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 35220787 - 35220731
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 187  Q
    |||||||||||||||||| |||| | | ||| |||||||||||||||||||||||||    
T  35220787 ctgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgg 35220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 43718005 - 43717946
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||| |||||||||| ||||| ||| ||||||| ||||||||||| ||||||||    
T  43718005 taagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatg 43717946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 4558730 - 4558820
Alignment:
Q  57 taagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||| |||||||||||| | ||||| |||  |||||||| ||  ||| ||||| |||||||||| ||| |||||||||| ||||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 7008633 - 7008753
Alignment:
Q  159 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 258  Q
    ||||||||||||||||||||| |||| |||| ||| ||| | |||||||||||||||||    ||| |||| || | ||||||||| | ||||||| |||    
T  7008633 tatgaaaataagctaaaaatatcttaaggacatgtcata-ggttgtttctataagctctctctaac-gtctcacaagtgcttatgccagtagataaactc 7008730  T
Q  259 aaataaaacaatccaaacaggct 281  Q
    ||||||  |||| ||||||||||    
T  7008731 aaataagtcaattcaaacaggct 7008753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 1470985 - 1470904
Alignment:
Q  66 atgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| | ||||| |||  |||||||| ||  |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 11795079 - 11795156
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||||||| | ||||||| |||||||||||||| |||| | | |||| ||||||||| |||| || ||||||||    
T  11795079 ttttcatataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaacaggttatggac 11795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 7514560 - 7514604
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttg 151  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  7514560 aattgttttcatataagctacaagctgttttcataagctattttg 7514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 31705025 - 31705105
Alignment:
Q  66 atgtataagttgtttctgtaactaaagataagatcgagtcaaatt-cttttcatataagctctaagctgttttcataagct 145  Q
    ||||||||| | ||||||||   |||||||| |||  |||||||| | ||||||||||||| |||||||||||||||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataagctgttttcataagct 31705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 787237 - 787158
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    |||||| |||| |||||| |||||  ||||||| ||  ||||||||| || ||||||||||| ||| |||||||||||||    
T  787237 ttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataag 787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 30013195 - 30013282
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||  || | |||  ||| ||||||||| ||||||| ||| ||||    
T  30013195 agtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggac 30013282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 30251522 - 30251463
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||||||||||||||| |||||  || ||||||||||||||  ||| ||||||||    
T  30251522 taagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatg 30251463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 35869824 - 35869867
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggata 155  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  35869824 ttttcatataagctataagttgttttcataagctattgtggata 35869867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 9834879 - 9834837
Alignment:
Q  105 caaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||| |||||||||||||| |||| ||||||||||||||||    
T  9834879 caaattgttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 21653091 - 21653149
Alignment:
Q  135 tttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgt 193  Q
    |||||| |||||| ||||| | | |||||||||||||| ||||||||||||| ||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgt 21653149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 31884534 - 31884616
Alignment:
Q  65 tatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||||||| ||||| |||| ||| |||| ||| | |  |||| |||||||||||||| |||  ||||||||||||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 34770856 - 34770914
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||| ||  ||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  34770856 aaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 2482858 - 2482924
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| ||||||||||||||  ||||| ||||||||| |||  ||||||||| |||| ||||||||    
T  2482858 tataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatg 2482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 6509396 - 6509351
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| | || ||||||||| |||||||||||||||||||||    
T  6509396 agtcaaattgtatttatataagctataagctgttttcataagctat 6509351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 7645954 - 7645999
Alignment:
Q  101 gagtcaaattcttttcatataagctctaagctgttttcataagcta 146  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||    
T  7645954 gagtcaaattgttttcatgtaagctataagttgttttcataagcta 7645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 9956897 - 9956832
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| |||||| | |||| ||||||||||| |||| ||||| ||| |||||||||||||| ||||    
T  9956897 ttttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 14949809 - 14949882
Alignment:
Q  46 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcata 119  Q
    |||||||| || ||||| ||||||||||| |  |||| |||| |||||||| || |||||||| ||||||||||    
T  14949809 catttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 31862437 - 31862554
Alignment:
Q  69 tataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    |||||||| ||||  |||| |||||||| ||  ||||||| | || || |||||||| |||| |||||||||||| |||  | || | | ||||||||||    
T  31862437 tataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaata 31862536  T
Q  169 agctaaaaatagcttatg 186  Q
    |||| |||| ||||||||    
T  31862537 agctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 42597331 - 42597420
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagc 144  Q
    |||||||  ||||||||||| | ||||| |||| |||||||| ||  ||| ||||| |||||||  ||||| |||| |||||||||||||    
T  42597331 tataagtacttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 44236887 - 44236834
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    ||||||||||||||||| ||||| | | |||||||||||||| |||||| ||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 217
Target Start/End: Original strand, 6966881 - 6966976
Alignment:
Q  121 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 217  Q
    ||||| |||||||||||||| ||| || ||||  | | |||||||||||||  |||||||||||  ||| ||||||| | ||||||| |||||||||    
T  6966881 aagctataagctgttttcattagccatcttggggagcttatgaaaataagcggaaaatagcttaatgacatgttataag-ttgtttcaataagctct 6966976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 31884900 - 31884856
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||    
T  31884900 tgcttatgctagtagataagctcaaataacgcaatccaagcaggc 31884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 39105403 - 39105525
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||| | ||||| || ||||| || | ||  ||| ||||| ||||| |||||||| ||| ||||||||||||||||| ||||| ||| |||||    
T  39105403 ttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatga 39105502  T
Q  164 aaataagctaaaaatagcttatg 186  Q
    |||||||||||||||||||||||    
T  39105503 aaataagctaaaaatagcttatg 39105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 265
Target Start/End: Original strand, 32172592 - 32172792
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||  | |||||  ||| |||||||| ||  |||||| || ||| |||||||||| |||||||||||||||||||||  || | |||  |||     
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatgg 32172691  T
Q  164 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 263  Q
    ||||||||| ||||| |||||||||| ||| ||| | ||||||| ||||||||| |  |||  ||| || | ||||||||||| || |||||||||||||    
T  32172692 aaataagctgaaaatggcttatggacatgtcataag-ttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaata 32172790  T
Q  264 aa 265  Q
    ||    
T  32172791 aa 32172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 9202879 - 9202757
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    |||| |||||| | |||||||| | |||||||| ||  ||| ||||| |||||||||||||  ||||||||||||||||| ||| ||| | ||| |||||    
T  9202879 ttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatga 9202780  T
Q  164 aaataagctaaaaatagcttatg 186  Q
    |||||||||  ||| ||||||||    
T  9202779 aaataagctggaaacagcttatg 9202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 142
Target Start/End: Complemental strand, 32059734 - 32059642
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataa 142  Q
    ||||| |||||||  ||||||||||| ||||| ||||||||| ||||| ||  ||||||| | |||||||||||||| ||||||||||||||||    
T  32059734 ttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 4014492 - 4014433
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  4014492 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 170
Target Start/End: Original strand, 12425535 - 12425616
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||||||| ||  ||| ||||| ||||| |||||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  12425535 aaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 18704175 - 18704083
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    |||||||| ||||||||||||| ||||| |||| |||||||| ||  ||||||  | |||| ||||||||| |||| |||||||||||||||||    
T  18704175 tataagttcttatgtataagttatttctataacaaaagataa-ataaagtcaagctatttttatataagctataagttgttttcataagctatt 18704083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 28776980 - 28777048
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatag 180  Q
    ||||| |||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||| |||||||||    
T  28776980 ttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatag 28777048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 36796836 - 36796708
Alignment:
Q  65 tatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 164  Q
    |||||||||||| |||||| ||| ||| |||| ||   || ||||| |||||| ||||||| ||||||||||||||  ||||| ||||| ||| ||  ||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgttttcatttgctatattggaaaacttacaaa 36796737  T
Q  165 aataagctaaaaatagcttatggacgtgt 193  Q
    ||||| || |||| |||||||| ||||||    
T  36796736 aataaactgaaaacagcttatgaacgtgt 36796708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 2568645 - 2568719
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||||| |||| ||||||||||||||||  |||| | |  |||||||||||||||||||| ||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatg 2568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 7319387 - 7319453
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    ||||| |||||||||||||| ||| |||||||| |||||||| ||||| ||| ||| ||||||||||    
T  7319387 aaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagct 7319453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 35553281 - 35553211
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    |||||||||||||||||||||||| ||| || |||||||| |||||| |||| | | |||| |||||||||    
T  35553281 agtcaaattcttttcatataagctataaactattttcatacgctattctggagagcttatggaaataagct 35553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 41052874 - 41052959
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 217  Q
    |||||||||||| |||||||||| | | |||| ||||||| ||||||||| ||||| || ||| ||| | |||||||||||||||||    
T  41052874 ctgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcata-ggttgtttctataagctct 41052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 7984965 - 7985030
Alignment:
Q  121 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||| |||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 10272537 - 10272413
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 188  Q
    |||||||| ||  ||||||||| ||||| |||||||| |||| ||||||||||||| || ||||| |   |||||||||||||| |||| | ||||  ||    
T  10272537 aaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacaga 10272438  T
Q  189 cgtgttatatgtttgtttctataagc 214  Q
    | ||| ||| | ||||||||||||||    
T  10272437 catgtcataag-ttgtttctataagc 10272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 12975326 - 12975375
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctattttgga 153  Q
    ||||||| |||||||||||||| |||||||| |||||||||||| |||||    
T  12975326 tcaaattgttttcatataagctataagctgtgttcataagctatcttgga 12975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 14295459 - 14295528
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||| |||| |||||||| ||  ||||||| | |||||||||||||| |||||||||||| ||||||||    
T  14295459 tttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctat 14295528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 26209543 - 26209461
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttca-tataagctctaagctgttttcataagctat 147  Q
    ||||||||||||| ||||| ||||  ||||||| ||  |||| |||| |||||| |||||||| |||||||||||||||||||||    
T  26209543 ttatgtataagttatttctataac--aagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 37588443 - 37588370
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||| |||| |||||||    
T  37588443 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttat 37588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 1619071 - 1619150
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||| | |||||||| |||||||||||||||||| | |||||| | ||||||||||| |||| |||| || |||||    
T  1619071 aaattctttccgtataagctataagctgttttcataagcca-tttggagagcatatgaaaatcagctgaaaacagtttatg 1619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 35135802 - 35135713
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||||| |||||||||||| | ||||| |||| |||||||| ||  ||||||| | |||||||||||||| ||||    ||||||||||||||    
T  35135802 tataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag----tttcataagctatt 35135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 41981942 - 41981874
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| || |||||||||||||||| ||||||| || ||| || |||||||||||||||  ||||||||    
T  41981942 tataaactataagctgttttcataaactatttttgagaacttacgaaaataagctaaaagcagcttatg 41981874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 6587195 - 6587116
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||||| |||||||| |||| ||||||||||||||||  |||| ||| | ||||||||||||  ||| ||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatg 6587116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 9703365 - 9703286
Alignment:
Q  70 ataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 149  Q
    ||||||| |||||||||| | |||||| ||  ||||||| || |||||||||||||  ||| |||||||||||| |||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttgttttcataagttattt 9703286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 11297232 - 11297114
Alignment:
Q  159 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 258  Q
    |||||||||||||| ||||||||| || ||| |||  || ||| ||||| ||||||||||   ||||||||||| | || |||||| | ||||||||||     
T  11297232 tatgaaaataagctgaaaatagctaattgacatgtcttaagtt-gtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  259 aaataaaacaatccaaacag 278  Q
    ||||||  |||| |||||||    
T  11297133 aaataagtcaattcaaacag 11297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 36326104 - 36326159
Alignment:
Q  222 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    |||| ||| |||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  36326104 aacaatctcaccagtgcttatgccaatagataagctaaaataagacaatccaaaca 36326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 38047986 - 38047903
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||||| | | ||| |||| |||||||| ||  ||||||||| ||||||||||  || || ||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctat 38047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 41957540 - 41957457
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||| ||||||| |||| | |||||||||||||||||||||  | || ||| |||||||||||| | |||| | |||||||||    
T  41957540 aaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggac 41957457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 4620187 - 4620229
Alignment:
Q  119 ataagctctaagctgttttcataagctattttggataacatat 161  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  4620187 ataagctataagctgttttcataagctatgttggagaacatat 4620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 7319072 - 7319014
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  7319072 ctgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 7319014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 9174929 - 9174967
Alignment:
Q  239 ttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  9174929 ttatgctaatagataagctcaaataagtcaatccaaaca 9174967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 10639960 - 10640014
Alignment:
Q  132 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  10639960 tgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatg 10640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 24030469 - 24030419
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||| |||||| ||||||||| || |||||| |||||||||||||||||||    
T  24030469 taagttgtttttataagctatattagataacttatgaaaataagctaaaaa 24030419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 264
Target Start/End: Original strand, 11457152 - 11457236
Alignment:
Q  179 agcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 264  Q
    ||||||||||| ||| ||| ||| ||||| |||||||||||  |||||||| || | || || ||| |||||||||||||||||||    
T  11457152 agcttatggacatgtcataagtt-gtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 16937841 - 16937800
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacagg 279  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  16937841 cttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 34205216 - 34205261
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  34205216 agtcaaattatttttatataagctataagttgttttcataagctat 34205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 37526282 - 37526209
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||||| |||| |||||||||||| | || |||| | | |||| ||||||||| |||| |||||||    
T  37526282 ttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttat 37526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 37690767 - 37690646
Alignment:
Q  65 tatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcat-aagctattttggataacatatga 163  Q
    |||||| ||||| ||||| |||  |||||||| ||| | |||||   |||||||||||||| |||| ||||||||| ||| |||| |||| | | ||||     
T  37690767 tatgtaaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatgg 37690668  T
Q  164 aaataagctaaaaatagcttat 185  Q
    ||||||||| |||| |||||||    
T  37690667 aaataagctgaaaacagcttat 37690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 40119945 - 40119880
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||||||| ||| |||||||||||||| || ||||||||| | ||||||||| |||| || |||||    
T  40119945 tataagctataacctgttttcataagcgatcttggataacttgtgaaaataatctaagaacagctt 40119880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 6938693 - 6938649
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||||| |||||||||||||||||   |||||||||||||    
T  6938693 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 6938649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 19138810 - 19138766
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||||    
T  19138810 tcaaattgttttcagataagctataagttgttttcataagctatt 19138766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaa 166  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Original strand, 42582914 - 42582982
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgtta 195  Q
    |||||||||||  |||||||| ||||| ||| |||||||||||||| |||| || ||||| || |||||    
T  42582914 taagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaacatgtta 42582982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 186
Target Start/End: Complemental strand, 40689092 - 40688995
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| ||  ||| ||||| |||||||||||||| |||||||| ||||||||||||  |||||||| |||||||||||||| |||| ||||||||    
T  40689092 aaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 38010694 - 38010790
Alignment:
Q  105 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 201  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  38010694 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 38010790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 47177617 - 47177693
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 182  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| ||||| ||  |||||||||||||||||| |||||    
T  47177617 aaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagctaaaagtagct 47177693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 27548184 - 27548310
Alignment:
Q  46 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagct 145  Q
    |||||||| |||||||  |||| |||||| | ||||  || | |||||||| ||  |||| |||| ||||||| |||||| |||||||||||||||||||    
T  27548184 catttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagct 27548283  T
Q  146 attttggataacatatgaaaataagct 172  Q
    || ||||||||| |||| | |||||||    
T  27548284 atcttggataacttatggagataagct 27548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 241
Target Start/End: Complemental strand, 48157252 - 48157075
Alignment:
Q  63 tttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 162  Q
    ||||||||||| || ||||| |||  |||||||| ||  ||| ||||| |||| ||||||||| |||  |||||||| ||||||||  ||| | | ||||    
T  48157252 tttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatg 48157153  T
Q  163 aaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgctta 241  Q
     ||||||||| |||| ||||||||||| ||  ||| | ||||||||||||||||| |  |||||||| || ||||||||    
T  48157152 gaaataagctgaaaacagcttatggacatggcataag-ttgtttctataagctctcccaaacagtctcacaaatgctta 48157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 20526448 - 20526505
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||    
T  20526448 taagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagctta 20526505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 12110337 - 12110412
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||||||| ||||  |||||||| ||||||||||||||||||||| ||| | ||| ||||||||||| |||||||    
T  12110337 agtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaa 12110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 28165030 - 28165152
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||||| ||||| |||| |||||||| ||  ||||||||| |||| ||||||||| ||| |||| || |||||||||  |||| | | ||||     
T  28165030 ttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatgg 28165129  T
Q  164 aaataagctaaaaatagcttatg 186  Q
    ||||||| | |||| ||||||||    
T  28165130 aaataagttgaaaacagcttatg 28165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 39505889 - 39506014
Alignment:
Q  57 taagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataa 156  Q
    ||||| |||||||||||||| ||| |||| | |||||| | || |||||||| | ||| |||||||||  |||| ||||||||||||||||| |||| |     
T  39505889 taagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaactgttt-catataagcattaagttgttttcataagctattctggagag 39505987  T
Q  157 catatgaaaataagctaaaaatagctt 183  Q
      |||| ||||||||| ||||||||||    
T  39505988 tttatggaaataagctgaaaatagctt 39506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 186
Target Start/End: Original strand, 47510116 - 47510190
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||||||| |||||||||||||||| || | ||||| ||| | ||||||||||||||||  ||||||||    
T  47510116 ttttcatataagctgtaagctgttttcataaactctcttggacaacttgtgaaaataagctaaaaggagcttatg 47510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 21453247 - 21453316
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||||| |||||||||||  |||||| || || ||||||||||| ||| |||||||||||||||||    
T  21453247 tttctgtaacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctat 21453316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 6263446 - 6263382
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 176  Q
    |||||||||||| | ||||||| |||||||||||||| |||| | |||||| |||||||||||||    
T  6263446 ttttcatataagttataagctgatttcataagctattatggagagcatatggaaataagctaaaa 6263382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 44821936 - 44822004
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    ||||||||| ||||  |||||| | |||||||||||||||||||||| |||| ||| ||||||||||||    
T  44821936 agtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataag 44822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 24363560 - 24363517
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacagg 279  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  24363560 tgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 48470046 - 48470105
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| |||||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||    
T  48470046 taagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatg 48470105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 28340937 - 28340892
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||    
T  28340937 agtcaaattgttgtcatataagctataagctgttttcataagctat 28340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 38713258 - 38713202
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttct 82  Q
    |||||||||||||||||| ||||||||| |||||||  || |||||||||| |||||    
T  38713258 ggataaacaacttaattaagcatttatcttataagtgattgtgtataagttatttct 38713202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 49060464 - 49060556
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcata 141  Q
    ||||| ||||||| |||||||||||| | ||||| |||| ||| |||| ||  ||||||||| |||| ||||||||| |||| | ||||||||    
T  49060464 ttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 752962 - 753029
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||| ||||||||||| |||| |||| ||||  | ||||||||||| ||||||||| |||||||    
T  752962 tataagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaaaacagcttat 753029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 991993 - 992092
Alignment:
Q  48 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||| |||||||  ||| ||||||||||||||| |||| ||| |||| ||  || |||| | |||||||||||| | ||| || ||||||||||||||    
T  991993 tttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 1417202 - 1417285
Alignment:
Q  63 tttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 146  Q
    |||||||||||  | ||| | |||| |||||||| ||  ||||||||| |||||||||||||  |||| |||||||||||||||    
T  1417202 tttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 24909641 - 24909692
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 153  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| ||||    
T  24909641 agtcaaattattttcatataagctataagttgttttcataagatattgtgga 24909692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 25507252 - 25507372
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagct 125  Q
    |||||||||||||||||| ||| || | | |||||| |||||||||||||| ||||| || | ||||||  |||    | ||| | ||||||||||||||    
T  25507252 ggataaacaacttaattaagcacttttaggataagtgtttatgtataagttatttctataccaaaagat--gattattttaaactattttcatataagct 25507349  T
Q  126 ctaagctgttttcataagctatt 148  Q
     |||| |||||||||||| ||||    
T  25507350 ataagttgttttcataagttatt 25507372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 43648242 - 43648285
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataag 170  Q
    ||||||||||||||||||||| ||||| || |||||||||||||    
T  43648242 taagctgttttcataagctatcttggagaaaatatgaaaataag 43648285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| |||| |||||| |||| |||| ||||||||| |||||||||||||| ||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 6601369 - 6601431
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||||||| |||||||||| ||||   | |||||||||||||| | ||||||||||||||    
T  6601369 taagctgtttttataagctattctggagtgcttatgaaaataagctgagaatagcttatggac 6601431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 27481434 - 27481320
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 154  Q
    ||||||| |||||||||||| | ||||| |||| || ||||| |   ||||||| | ||| |||||||||| |||| | ||||||||||||||  |||||    
T  27481434 tataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggat 27481335  T
Q  155 aacatatgaaaataa 169  Q
    | | |||| ||||||    
T  27481334 agcttatggaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 33128755 - 33128813
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||| ||||| |||| ||||| ||| | ||||||||||||||||| |||||||    
T  33128755 taagctgtttacataaactatattggagaacttgtgaaaataagctaaaaaaagcttat 33128813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 5369784 - 5369739
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||| | |||||||||| ||| |||||||||||||||||||||    
T  5369784 agtcaaactgttttcatatatgctataagctgttttcataagctat 5369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 33678776 - 33678825
Alignment:
Q  121 aagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    ||||| ||||||||||||||||||||| ||||| ||| | ||||||||||    
T  33678776 aagctataagctgttttcataagctatcttggaaaacttgtgaaaataag 33678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 148
Target Start/End: Original strand, 39518807 - 39518852
Alignment:
Q  103 gtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  39518807 gtcaaattgtttgcatataagctttaagttgttttcataagctatt 39518852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 46280349 - 46280284
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||| ||| ||||||||||| ||||||||| ||||| ||| |||||||||| ||| |||| |||||    
T  46280349 tatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 46609186 - 46609074
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 201  Q
    ||||||| | |||||||||||| | ||||||||| |  |||| |||||| || |   |||| ||||||||| ||||||| |||| ||| |||||| |||     
T  46609186 agtcaaactgttttcatataaggtataagctgttctggtaagttatttttgagagattatggaaataagctgaaaatagtttatagacatgttat-tgtc 46609088  T
Q  202 tgtttctataagct 215  Q
    ||||||||||||||    
T  46609087 tgtttctataagct 46609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 46825062 - 46825151
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga-aaataagctaaaaa 177  Q
    |||||||| ||  ||||||||| |||||||||||||  ||| | ||||||||||||||| |||||   | ||||| ||||||||||||||    
T  46825062 aaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaa 46825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 47046201 - 47046156
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| |||||||||||||||  || ||||||||||||||||    
T  47046201 agtcaaattgttttcatataagctccgagttgttttcataagctat 47046156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 189
Target Start/End: Original strand, 7623078 - 7623202
Alignment:
Q  65 tatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 164  Q
    |||||||||||| ||| | |||| |||| ||| ||  |||| || |||||| ||||||||| |||||| ||||||||| |||| ||| | |   || |||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaa 7623177  T
Q  165 aataagctaaaaatagcttatggac 189  Q
    ||||||| ||||| | |||||||||    
T  7623178 aataagccaaaaacaacttatggac 7623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 30456556 - 30456476
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 169  Q
    |||||||| ||  ||||||||| |||||||||||| | ||||  |||||||||| |||| ||||| | | |||||||||||    
T  30456556 aaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 30535550 - 30535622
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    ||||| ||||| || |||||||||| |||||||||| ||  | ||||||||||||||| || |||| ||||||    
T  30535550 ttttcgtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagctta 30535622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 31002725 - 31002781
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagct 145  Q
    |||||||| ||  ||||||| | |||||||||||||| ||||||||||| |||||||    
T  31002725 aaagataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 32410648 - 32410688
Alignment:
Q  234 aatgcttatgctaatagataagctcaaataaaacaatccaa 274  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  32410648 aatgcttatgccaatagataagctcaaataagccaatccaa 32410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 36517588 - 36517640
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||||||| ||||| ||  ||||||||||| || |||||||||||||    
T  36517588 ttttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatg 36517640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 47559669 - 47559629
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaat 167  Q
    ||||||||||||||||| ||||||||| ||| |||||||||    
T  47559669 taagctgttttcataagttattttggagaacttatgaaaat 47559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 37273140 - 37273272
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtctt 230  Q
    ||||||||||||||||| ||||| ||| |||| ||||||| | |||| | ||||||||| ||| ||| ||| ||||| ||||||||| |  ||||||||     
T  37273140 ctgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagtt-gtttccataagctctcccaaacagtctc 37273238  T
Q  231 accaatgcttatgctaatagataagctcaaataa 264  Q
    |||| |||||||||||||| ||||| ||||||||    
T  37273239 accagtgcttatgctaataaataagttcaaataa 37273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 281
Target Start/End: Original strand, 45541580 - 45541726
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 233  Q
    |||||||||||||| ||||||||| ||||| ||||| || |||| |||||||| || ||| ||| |  |||||  ||||| |||||  |||||||||||     
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataag-ctgttttcataagttcttctaaacagtcttaca 45541678  T
Q  234 aatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 281  Q
    | || |||| | | || ||||||||||||||  |||||||||||||||    
T  45541679 agtgtttataccattaaataagctcaaataagtcaatccaaacaggct 45541726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 277
Target Start/End: Original strand, 2923457 - 2923629
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttg 203  Q
    |||||||  |||||| |||||| ||||||||||||||||||||   || | |   |||  |||||||||||||||| ||||||||| |||  || ||| |    
T  2923457 tcaaattgctttcatgtaagctataagctgttttcataagctacactgaagagattatataaataagctaaaaataacttatggacatgtagtaagtt-g 2923555  T
Q  204 tttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    |||||||||| |||||  ||||||||| | | | ||||||  ||||||||||||| |||||  |||||| ||||    
T  2923556 tttctataagttcttccaaacagtctttcaagtacttatgtcaatagataagctcgaataagtcaatccgaaca 2923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 25459624 - 25459548
Alignment:
Q  202 tgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    ||||||| ||||||||||  |||| ||| || | ||||||||||| | |||||||||||||||| ||||||||||||    
T  25459624 tgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 33972797 - 33972729
Alignment:
Q  132 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgt 200  Q
    |||||| ||||||||||||||| ||| | |||||||||||| |||| || |||||||| ||||||||||    
T  33972797 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaaaggttatggacatgttatatgt 33972729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 36783474 - 36783343
Alignment:
Q  56 ataagtttttatgtataa-gttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 154  Q
    |||||| ||||||||||| | | ||||| || | |||||||| ||  ||| ||||| ||||||||||| || | ||||||||||||||||||| |||||     
T  36783474 ataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggag 36783375  T
Q  155 aacatatgaaaataagctaaaaatagcttatg 186  Q
     |  |||||| ||||||| |||| ||||||||    
T  36783374 caattatgaatataagctgaaaacagcttatg 36783343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 44747485 - 44747418
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| |||||||||||||| |||  |||||||    
T  44747485 tataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaagaagcttat 44747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 50600254 - 50600191
Alignment:
Q  119 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 182  Q
    ||||||| |||||||||||||| |||||| ||||| ||| |||||||||||||| |||| ||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacagct 50600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 466202 - 466252
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  466202 ttttcataagctatgttggagaacttatgaaaataagctaaaaaaagctta 466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 24235852 - 24235726
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagct 125  Q
    |||||||||||||||||| |  |||||   |||||   || |||||||||| ||||| |||| |||||||| ||  ||||||| | |||  |||||||||    
T  24235852 ggataaacaacttaattaagtgtttataacataagcacttgtgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagct 24235753  T
Q  126 ctaagctgttttcataagctattttgg 152  Q
     |||| |||||||||||||||| ||||    
T  24235752 ataagttgttttcataagctatattgg 24235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 38462205 - 38462303
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||| ||||||| ||||| |||||| | ||||| || | |||||||| ||  ||||||| | |||||||||| ||| ||| |||||||||||||||||    
T  38462205 ttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 1395611 - 1395688
Alignment:
Q  65 tatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataa 142  Q
    |||||||||| | ||||| |||| |||||||| ||  ||||||||| |||||||||||||| | | ||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 2201105 - 2201158
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggata 155  Q
    ||||||| | |||||||||||||| |||||||||||||| |||||| |||||||    
T  2201105 agtcaaactgttttcatataagctataagctgttttcattagctatcttggata 2201158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 2719463 - 2719532
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||| ||| ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 2719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 280
Target Start/End: Complemental strand, 4534431 - 4534291
Alignment:
Q  139 ataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgc 238  Q
    ||||||||||||||| | | ||   |||||||||||||  | |||| | |||||||||| ||| |||||||||| |||| |  || ||| |||| |  ||    
T  4534431 ataagctattttggagaccttacagaaataagctaaaatcaacttacgaacgtgttataagtt-gtttctataacctctaccaaatagttttacaagggc 4534333  T
Q  239 ttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    |||||  |||||||||||||||||||| ||||| ||||||||    
T  4534332 ttatgtgaatagataagctcaaataaatcaatcgaaacaggc 4534291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 21367648 - 21367725
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    ||||| ||||| |||||  | |||| |||||||||||||||| ||||| ||| |||||||||||||| |||| |||||    
T  21367648 aaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 32095317 - 32095200
Alignment:
Q  69 tataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    |||||||| ||||| |||| |||||||| ||  ||| ||||| ||||  ||||| || ||||| |||||||||| |||| ||| | |||  || ||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttgaaaaactaataaaaata 32095218  T
Q  169 agctaaaaatagcttatg 186  Q
    |||||||| |||||||||    
T  32095217 agctaaaattagcttatg 32095200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 33405250 - 33405197
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaa 165  Q
    |||||||||||||| ||||||||||||||||||||| ||| | ||| |||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 280
Target Start/End: Original strand, 51929854 - 51929895
Alignment:
Q  239 ttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  51929854 ttatgctaatagataagctcaaataagtcaatccaaacaggc 51929895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 34254891 - 34254815
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 188  Q
    |||| |||| |||| ||| || ||||||||||||||| |||| ||| |||| ||||||||| ||| |||||||||||    
T  34254891 tttttatattagctataaactattttcataagctattctggagaacttatgtaaataagctgaaagtagcttatgga 34254815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 52618984 - 52619064
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||||||||| | ||||||||||||| ||||||| ||| | | | | |||||||||| | |||||||||||||    
T  52618984 aaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatg 52619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 5436241 - 5436304
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||| |||||||||||| | || ||||||||||||  |||| ||||| ||||||||||||||||    
T  5436241 aattgttttcatataagttgtatgctgttttcatagactatcttggagaacatatgaaaataag 5436304  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 16790439 - 16790384
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||||||||| ||||||| | ||||||||||| || |||| |||||||||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatggac 16790384  T

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Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 149
Target Start/End: Original strand, 37788794 - 37788884
Alignment:
Q  58 aagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 149  Q
    |||| |||||||||||||| ||| | |||| |||||||| ||  |||| |||| ||||| ||||| || |||| ||||||||||||||||||    
T  37788794 aagtgtttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctattt 37788884  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 41633362 - 41633509
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacag 226  Q
    |||||||||||||| |||||||||||| | | |||||||||||||| |||| |  |||| ||| ||| ||   ||||||| ||||| |||| | ||| ||    
T  41633362 taagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcat-gatttgtttttataacctctcctgaatag 41633460  T
Q  227 tcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    ||| |  | ||  | ||| |||||||||||||||||||| |||||||||||    
T  41633461 tctcataagtg--tttgccaatagataagctcaaataaaccaatccaaaca 41633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 2128326 - 2128256
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 197  Q
    |||||||||||||||||| || ||  | ||| |||||||||||||| |||| |||||||| || |||||||    
T  2128326 taagctgttttcataagccatcttttagaacgtatgaaaataagctgaaaacagcttatgaacatgttata 2128256  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 14145893 - 14145959
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    ||||| ||||| |||| ||| |||| | |||||||||||||| |||||| || ||||||||||||||    
T  14145893 aaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 28622074 - 28622008
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||| |||||||||||||||| |||| || || ||| ||||||||||| || |||| ||||||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatg 28622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 32582747 - 32582789
Alignment:
Q  128 aagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||||||||||||||||||||||||| ||| |||| |||||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaataag 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 41159010 - 41159080
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataa 96  Q
    |||||| |||||||||||  |  |||||||||||||  ||||||||||||| || || |||||||||||||    
T  41159010 ggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataa 41159080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 14548804 - 14548739
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||| ||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 21865563 - 21865604
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttgga 153  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  21865563 ttttcatataagctataagttgttttgataagctattttgga 21865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 25183071 - 25182994
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatgga 188  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||  | || ||||| ||| ||||||||||||||||    
T  25183071 ttttcatatgagctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaaaatagcttatgga 25182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 30443886 - 30443951
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||| ||| ||||||||||| |||| |||| ||||| ||| |||||||||||||| |||| |||||    
T  30443886 tatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagctt 30443951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 37689473 - 37689428
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttg 151  Q
    ||||| |||||||||||||| ||| || ||||||||||||||||||    
T  37689473 aaattattttcatataagctataaactattttcataagctattttg 37689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 43116575 - 43116478
Alignment:
Q  48 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagct 145  Q
    |||||| || |||| ||||||| |||| | ||||| |||| |||||||| ||| | |||||   |||||||||||||| ||||  |||||||||||||    
T  43116575 tttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 53762351 - 53762310
Alignment:
Q  239 ttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    |||||||| |||||||||||||||||| |||||||| |||||    
T  53762351 ttatgctagtagataagctcaaataaaccaatccaagcaggc 53762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 901931 - 901987
Alignment:
Q  132 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 188  Q
    |||||| ||||||||| ||||| ||| |||||||||||| | |||| ||||||||||    
T  901931 tgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgga 901987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 3775846 - 3775770
Alignment:
Q  201 ttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    ||||||||||||||||| |  |||||||| || | || |||||| | ||||||| |||||||||  |||||||||||    
T  3775846 ttgtttctataagctctgccaaacagtctaacaattgtttatgccagtagataaactcaaataaggcaatccaaaca 3775770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 20874392 - 20874352
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  20874392 aattgttttcatataaactataagctgttttcataagctat 20874352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 20880469 - 20880537
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||| ||| ||||||| | ||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  20880469 tatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatg 20880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 21862303 - 21862175
Alignment:
Q  68 gtataagttgtttctgtaactaaagataagat-cgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaa 166  Q
    ||||||| ||||||| | || |||||||| || | ||||||||| |||||||||||||| | ||  ||| |||| |||||| | ||| | | |||| |||    
T  21862303 gtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaa 21862204  T
Q  167 taagctaaaaatagcttatggacgtgtta 195  Q
    |||||| |||| | ||||||||| |||||    
T  21862203 taagctgaaaacaacttatggacatgtta 21862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 21872363 - 21872319
Alignment:
Q  103 gtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcataagctat 21872319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 39602287 - 39602235
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||||| | ||||||||||||||||||||| || || ||| ||||||||||||    
T  39602287 tataagttataagctgttttcataagctatctttgagaacttatgaaaataag 39602235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 43948751 - 43948815
Alignment:
Q  223 acagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtct 287  Q
    ||||||| || ||||||||||  ||||||| | ||||||| |  |||||||||||||||||||||    
T  43948751 acagtctcacaaatgcttatgacaatagattaactcaaattagccaatccaaacaggcttagtct 43948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 277
Target Start/End: Original strand, 11513825 - 11514047
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||| ||||||  |||||||||||||| || |   ||| |||||||| ||  ||||||||| |||||||||||||| |||| ||||||||||||||||     
T  11513825 ttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 11513921  T
Q  149 ttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaat 248  Q
     |||| ||| | || ||||||||| |||||||||||| | | ||  ||     |||||  |||||||||    |||||||| || | ||||||||||| |    
T  11513922 atggagaacttttggaaataagctgaaaatagcttataggcatgccat---gctgttttcataagctctctaaaacagtctcacaagtgcttatgctagt 11514018  T
Q  249 agataagctcaaataaaacaatccaaaca 277  Q
    |||||| |||||||||| |||||||||||    
T  11514019 agataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 18066109 - 18066189
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||| ||| || ||||||||| | |||||||||||||    
T  18066109 aaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatg 18066189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 201
Target Start/End: Complemental strand, 22681275 - 22681179
Alignment:
Q  105 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 201  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  22681275 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 22681179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 264
Target Start/End: Original strand, 15377752 - 15377903
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc-taaaaatagcttatggacgtgttatatgtttgtttctat 210  Q
    |||||||||||| | |||||||||||||||||||||| ||   | | ||||||||||| | |||||||||||||||||||||| ||| | ||||||| ||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaataaacttaaaaatagcttatggacgtgtcataag-ttgtttccat 15377850  T
Q  211 aagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 264  Q
     || | |||  ||||| ||||| | |||||||| || || ||||||||||||||    
T  15377851 -agattttccaaacagccttacaattgcttatgttagtacataagctcaaataa 15377903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 18179323 - 18179246
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||||||||| ||||||| |||||||||||||  |||| ||| || ||||||||||| ||||||||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggac 18179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 8017415 - 8017477
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||    
T  8017415 aaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaata 8017477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 10143096 - 10143194
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||| ||||||  ||||||||||||| ||||| |||| |||||||| ||  ||||||| | |||| ||||||||| |||| | ||||||||||||||    
T  10143096 ttatcgaataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctat 10143194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 29643509 - 29643465
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagcta 146  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  29643509 agtcaaattactttcatataagctctaagctgttttcataagcta 29643465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 2416252 - 2416331
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    ||||||||||||| |||||||| | |||||||| ||  ||| ||||| |||| ||||||||| ||||||||||| |||||    
T  2416252 ttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 6993816 - 6993730
Alignment:
Q  103 gtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||| | |||||||||||| || | ||||||||||||||||  | || | | ||||||||||||||||||||  |||||||||    
T  6993816 gtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatggac 6993730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 15370297 - 15370239
Alignment:
Q  222 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    |||||||| || ||||||||||| | |||||||||||||||||  ||||||||||||||    
T  15370297 aacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggc 15370239  T

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Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 32821848 - 32821961
Alignment:
Q  164 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 263  Q
    |||||| || |||| ||||||||||| ||| ||| ||| |||||||||| ||||||  ||||||||| | |||||||| | |  ||||||||||||||||    
T  32821848 aaataaactgaaaacagcttatggacatgtcataagtt-gtttctataaactcttccaaacagtcttgcaaatgcttacgttggtagataagctcaaata 32821946  T
Q  264 aaacaatccaaacag 278  Q
    |  ||||| ||||||    
T  32821947 agtcaatctaaacag 32821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 6167358 - 6167305
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagcta 173  Q
    |||||| ||||||||||| ||||||||||||||| ||| |||| ||||||||||    
T  6167358 taagctataagctgtttttataagctattttggagaacttatggaaataagcta 6167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 10150657 - 10150726
Alignment:
Q  27 gataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataa 96  Q
    ||||||||||||||||| ||| ||||  ||||||| |||||||||||||| ||||| |||  ||||||||    
T  10150657 gataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataa 10150726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 25800810 - 25800851
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctat 25800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 39983329 - 39983402
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||||| |||| ||||||||||||||||  |||| | |  |||||||||| || ||||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttat 39983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 41875780 - 41875675
Alignment:
Q  68 gtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaat 167  Q
    ||||||| ||||||| |||| |||||||| ||   || || || ||||| |||||||| ||||||||||||||||||||| ||||  | | || ||||||    
T  41875780 gtataagctgtttctttaaccaaagataaaatgatgttaagttgttttcgtataagctgtaagctgttttcataagctatcttggtgagcttaagaaaat 41875681  T
Q  168 aagcta 173  Q
    ||||||    
T  41875680 aagcta 41875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 42457943 - 42458000
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| |||||| |||||||||||| || || |||||||||||||||||| ||||    
T  42457943 taagctcttagctgtattcataagctatcttagagaacatatgaaaataagctgaaaa 42458000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 26143708 - 26143656
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaata 179  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||| ||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaata 26143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 26626854 - 26626934
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| ||||| ||||||||  |||||||||||||||||||| ||| | ||| ||||||||||| || |||| || |||||    
T  26626854 aaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatg 26626934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 29316864 - 29316784
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||| |||| || |||||||||||||| |||||| ||||| ||| |||| ||||||||| |||| | ||||||    
T  29316864 aaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatg 29316784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 33503105 - 33503153
Alignment:
Q  233 caatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 281  Q
    |||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  33503105 caatgcttatgctagtagataagctcaaataagccaatacaaacaggct 33503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 40279190 - 40279258
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||| | |||| |||||||||||||||| ||||| ||| ||||||||| |||| ||||||| |||||    
T  40279190 tataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatg 40279258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 680484 - 680555
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| ||||| |||||||| |||||| |||||||||||||| ||| | ||| | |||||||||||| ||||    
T  680484 aaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaa 680555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 3611232 - 3611287
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||||||||| || |||||    
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatg 3611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 9174817 - 9174876
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||||||||||||||| ||  | | | |||||||||||||| |||||||||||||    
T  9174817 taagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatg 9174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 9395111 - 9395190
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    ||||| ||||||||||| || |||||||||||||| || |||| || | | | |||||||||||||| |||| |||||||    
T  9395111 aaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttat 9395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 14302918 - 14302961
Alignment:
Q  222 aacagtcttaccaatgcttatgctaatagataagctcaaataaa 265  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  14302918 aacagtctcacaaatgtttatgctaatagataagctcaaataaa 14302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 147
Target Start/End: Complemental strand, 17952832 - 17952749
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||| |||||| | ||||| |||| |||||||| ||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 33931647 - 33931612
Alignment:
Q  118 tataagctctaagctgttttcataagctattttgga 153  Q
    |||||||| |||||||||||||||||||||||||||    
T  33931647 tataagctataagctgttttcataagctattttgga 33931612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 35755645 - 35755554
Alignment:
Q  52 tcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    |||||||||| |||||||||||| | ||||| |||  ||| | || ||  ||||||||| ||||||| |||||| |||| ||||||||||||    
T  35755645 tcgtataagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 42621452 - 42621393
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| ||||||||||||||||| |||| |||| ||| | |||||||||||| ||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaa 42621393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 10285970 - 10286012
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  10285970 tgcttatgcaaatagataagcttaaataagacaatccaaacag 10286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 12464579 - 12464485
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||||||| ||  ||| ||||| ||||  |||| ||| |||||| |||||||||||||| ||||| ||| | |||||||||||| |||| |||||    
T  12464579 aaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagctt 12464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 33319876 - 33319822
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  33319876 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 33319822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 40279409 - 40279471
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||| |||||||||||||||| ||||| ||| |||||||||||| | |||| || ||||||||    
T  40279409 taagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggac 40279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 656903 - 656802
Alignment:
Q  69 tataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    |||||| | ||||| |||| |||||||| ||  | ||||||| ||||| |||||||| |||| || ||||||||||||| ||| | | | ||||||||||    
T  656903 tataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T
Q  169 ag 170  Q
    ||    
T  656803 ag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 1893355 - 1893290
Alignment:
Q  121 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| ||||||||||||  ||||||| ||||| ||| | |||||||||||| |||||| ||||||    
T  1893355 aagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatg 1893290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 3423914 - 3423841
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataa 122  Q
    ||||| || |||| |||||||||||||| ||| |||| | |||||||| ||  ||||||||| |||||||||||    
T  3423914 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 13869186 - 13869121
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 169  Q
    ||||||| ||||||| |||||| ||||||||||||||||| |||  |||| |||  ||||||||||    
T  13869186 tcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaataa 13869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 153
Target Start/End: Original strand, 16353848 - 16353889
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttgga 153  Q
    |||||||||||||| ||||||||||| ||||||||| |||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttgga 16353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 16398116 - 16398173
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||||| |||||||||| ||| ||||| ||| |||||||||||||| |||| ||||||    
T  16398116 taagctattttcataagttatgttggagaacttatgaaaataagctgaaaacagctta 16398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 23143107 - 23143030
Alignment:
Q  66 atgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    ||||||||| | ||| |||||| |||||||| ||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 23554897 - 23554820
Alignment:
Q  66 atgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    ||||||||| | ||| |||||| |||||||| ||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 34652097 - 34652017
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagct 215  Q
    |||||||||||||| ||||| | | |||| ||||||| | |||| ||||||||||| ||| ||| | |||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataag-ttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 35378598 - 35378541
Alignment:
Q  129 agctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||| ||||| || ||||||| | |||||||||||||| |||||| ||||||    
T  35378598 agctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatg 35378541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 43141848 - 43141893
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  43141848 agtcaaattgtttccatataagctataagatgttttcataagctat 43141893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 750664 - 750731
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| | |||||||| |||||||||| ||||| ||| |||| ||||||||| |||| ||||||||    
T  750664 tataagctatgagctgttt-cataagctatcttggagaacttatgcaaataagctcaaaacagcttatg 750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 938593 - 938517
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 188  Q
    |||||||||||||| ||||| || |||||||||||| || || | | | |||||||||| | ||||| |||||||||    
T  938593 ttttcatataagctataagcggtattcataagctatcttagagagcttctgaaaataagtttaaaatggcttatgga 938517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 1625881 - 1625961
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| ||||| |||||| | |||| |||||||||||||||| ||||| ||| || |||||| |||| |||| | ||||||    
T  1625881 aaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatg 1625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 28039425 - 28039341
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| |||| ||||||||||| || |||||  |||||||||||| | ||||| ||  |||| ||||||||| |||| ||||||||    
T  28039425 agtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatg 28039341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 40759270 - 40759314
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||  |||||||||||||||||||  ||||||||||||||    
T  40759270 tgcttatgtcaatagataagctcaaataaggcaatccaaacaggc 40759314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 42592326 - 42592358
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagc 144  Q
    |||||||||||||| ||||||||||||||||||    
T  42592326 ttttcatataagctataagctgttttcataagc 42592358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 42868437 - 42868397
Alignment:
Q  240 tatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  42868437 tatgccaatagataagctcaaataaggcaatccaaacaggc 42868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 4622072 - 4622157
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||| |||||||||||||||| |||||||||| |||| ||||| ||||| | | | ||||||||||||||||| |||||||||||    
T  4622072 tcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggac 4622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 189
Target Start/End: Complemental strand, 44032146 - 44032005
Alignment:
Q  48 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||| ||||||| ||||||||||||  |||||| |||| |||| ||| ||  ||||||||| |||||||||||||| ||| || ||||| |||| |||    
T  44032146 tttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttat 44032047  T
Q  148 tttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
     ||| | | | |||| |||| |||| ||||||||||||||||    
T  44032046 cttgaagagcttatggaaattagctgaaaatagcttatggac 44032005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 49517012 - 49517091
Alignment:
Q  67 tgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 146  Q
    |||||||||| ||||| |||| |||||||| ||  ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 48830208 - 48830123
Alignment:
Q  63 tttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    |||||||||||||| ||||| | || |||||||| ||  ||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  48830208 tttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctatt 48830123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 7137075 - 7137007
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| || ||||||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatg 7137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 9656631 - 9656711
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| |||||||||||||| |||||||| ||||||||||||  ||||| |  |||||||||||||| |||| ||||||||    
T  9656631 aaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatg 9656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 7218167 - 7218076
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgt 193  Q
    ||||||||| |||||||||||||| |||| ||||||||||| ||||  |||| ||| |||||||||||| | |||| ||||| || ||||||    
T  7218167 agtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgt 7218076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 28482315 - 28482242
Alignment:
Q  113 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||| | | || ||||||||||||||||||| |||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatg 28482242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 27820414 - 27820346
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| || |||||||| ||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  27820414 tataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 27820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 34290229 - 34290297
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| ||||||||||||||||||||| ||| | ||| |||||||||||||| |||| | ||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatg 34290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 35179141 - 35179201
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 187  Q
    ||||||||||||||||| |||| |||| ||| |||||||||||||| |||| |||||||||    
T  35179141 taagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 45975683 - 45975751
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||  |||||||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  45975683 tataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 51695584 - 51695504
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| ||||| |||||| | | || |||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  51695584 aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 51695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 6231899 - 6231733
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 211  Q
    ||||||||||| || |||||||||||| |||||||   || | ||| |||  ||||||||| |||| || |||||||| ||| || |  ||||||| ||     
T  6231899 ttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcat-tagttgtttccatg 6231801  T
Q  212 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacagg 279  Q
    |||| | | ||||| ||| || |||| |||||||| ||||||| |||||||||| |||| ||||||||    
T  6231800 agctatccagaacaatctcacaaatgtttatgctagtagataacctcaaataaaccaattcaaacagg 6231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 25006127 - 25006076
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 153  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  25006127 agtcaaattgttttcatataagctataagttgttttcataagctatcttgga 25006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 264
Target Start/End: Complemental strand, 31517822 - 31517672
Alignment:
Q  113 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataa 212  Q
    ||||||||||||| |||||||| ||||||| || | ||||| | | |||||||||||||| |||| |||||||| || ||| ||  | ||||||  ||||    
T  31517822 tttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgag-ttgttttgataa 31517724  T
Q  213 gctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 264  Q
    | ||| |  |||||||| || | ||||||||| | || ||||||||||||||    
T  31517723 gttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 15361690 - 15361736
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  15361690 agtcaaattattttcatataagctataagctgttttcataagatatt 15361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 4576807 - 4576852
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  4576807 taagctgttttcataagctatattgaataacttatgaaaataagct 4576852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 16322813 - 16322910
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||| ||  ||||||| | |||||||| ||| | ||||||||||||||| ||||||||| | | | |||| |||||||||||||| | ||||||    
T  16322813 aaagataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 23544746 - 23544657
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctct-aagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| ||  ||||||||| |||||||||||||| | || ||||||||||||||||| | ||| ||| |||||| ||| ||||||||    
T  23544746 aaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatctcggaaaacttatgaacatacgctaaaaa 23544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 30371127 - 30371212
Alignment:
Q  104 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||| |||||||||||||| |||| ||||||||||||  |||||||| | | |||  ||||||||| |||| | |||||||||    
T  30371127 tcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatggac 30371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 39603899 - 39603842
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||| |||||| ||| ||||||||||||| | |||||||||||||| |||||||||||    
T  39603899 taagttgtttttatatgctattttggatagcttatgaaaataagctgaaaatagctta 39603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 6292470 - 6292554
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||||||| |||||| ||||  | |||||| ||||| ||| |||||||||| | | |||||||||||||| |||| ||||||||    
T  6292470 agtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatg 6292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 10199533 - 10199417
Alignment:
Q  70 ataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 169  Q
    ||||||| ||||| ||||  ||||||| ||  ||||||| | ||||| ||||| |  |||||| ||||||||||||||||| || | | |||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataa 10199434  T
Q  170 gctaaaaatagcttatg 186  Q
    ||| |||| | ||||||    
T  10199433 gctgaaaacaacttatg 10199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 12763419 - 12763475
Alignment:
Q  222 aacagtcttaccaatgcttatgctaatagataagctc-aaataaaacaatccaaaca 277  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||  |||||||||||    
T  12763419 aacagtcttacaaatgcttatgctaatagataaactcaaaataagccaatccaaaca 12763475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 17269180 - 17269272
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||  ||||||||||||| |||||  ||| ||||  || ||  ||||||||| |||||||||||||  |||| ||||||||||||||||    
T  17269180 tataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctat 17269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 189
Target Start/End: Complemental strand, 27963452 - 27963376
Alignment:
Q  113 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | | |||  |||||||||||||| | |||||||||    
T  27963452 tttcataaaagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggac 27963376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 28689537 - 28689458
Alignment:
Q  112 ttttcatataagctctaagctgttttcata--agctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||||||||| |||| ||||||||||  |||||| ||||| | | |||||||||||||| |||| | |||||||||    
T  28689537 ttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggac 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 38867909 - 38867849
Alignment:
Q  117 atataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||||||| ||| ||||||||||||| ||| ||| | ||| |||||||||||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaa 38867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 25944420 - 25944491
Alignment:
Q  113 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||||| |||| | ||||| |||||||||||||||  ||||| |  |||||||||||||| |||||||||||    
T  25944420 tttcatgtaagttataagcggttttcataagctatcctggattaattatgaaaataagctgaaaatagctta 25944491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 38189773 - 38189816
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  38189773 ttttcttaagctattttggataacttatgaagataagctaaaaa 38189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 39270506 - 39270431
Alignment:
Q  114 ttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    |||||||||| | ||||||||||||||||||||   | || | |||||||||||||| | |||| |||||||||||    
T  39270506 ttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggac 39270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 49888749 - 49888824
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 182  Q
    |||| ||||| |||||||| | || |||||||||||||||| || || ||| |||||||||||||  |||||||||    
T  49888749 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 49888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 2294905 - 2294975
Alignment:
Q  119 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||| |||||| ||||||||| |||| ||||| ||| || ||||||||| | |||| |||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatggac 2294975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 4202298 - 4202228
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataa 96  Q
    |||||| ||||||||||| || |||||| |||||||  ||| ||||||||| ||||| |||| ||||||||    
T  4202298 ggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataa 4202228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 4549536 - 4549462
Alignment:
Q  201 ttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaa 275  Q
    ||||||||||||||||| |  |||||||| |  ||||||||||| | ||||||| |||||||||  |||||||||    
T  4549536 ttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 16145035 - 16144981
Alignment:
Q  130 gctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||| |||||||| |||| ||| ||||| ||||||||||| ||||||||||||||    
T  16145035 gctgctttcataaactatcttgaataacttatgaaaataacctaaaaatagctta 16144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 25005890 - 25005808
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    |||||| || |||||||||||||| |||| ||||||||||||||||  |||| | | ||| |||| ||||| |||||| ||||    
T  25005890 agtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 27738286 - 27738228
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||| ||  ||||||||| |||||||||||||| |||  ||||||||||||||||    
T  27738286 aaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 28467418 - 28467356
Alignment:
Q  84 taactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 146  Q
    |||| |||||||| ||  ||||||||| ||||||||||||||  ||| |||||||||||||||    
T  28467418 taacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 37631517 - 37631475
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  37631517 cttatgctaatagatgagctcaaataagccaatccaaacaggc 37631475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 41195257 - 41195203
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  41195257 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 41195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 1255524 - 1255479
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  1255524 agtcaaattcttttcatacaagttataagctgttttcattagctat 1255479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 275
Target Start/End: Original strand, 2777885 - 2778040
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 217  Q
    |||||||| ||||||||||| ||||| ||  ||||| ||| |||||||||||||| ||||  ||||||| |   || ||| ||| ||||| ||||| |||    
T  2777885 tataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttc-ataagttct 2777983  T
Q  218 tcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaa 275  Q
     |  |||||||| | |||  ||||||| |||||||||||| ||||||  |||||||||    
T  2777984 cctaaacagtctca-caaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 6774976 - 6775048
Alignment:
Q  113 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||||||  |||||||||||| ||||||| ||| | |||||| | ||||||||| |||| ||||||||    
T  6774976 tttcatataagcta-aagctgttttcacaagctatcttgaagaacataagtaaataagctgaaaacagcttatg 6775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 7941615 - 7941664
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||||||||||||||| ||| ||| |||||||||||| | ||||||||||    
T  7941615 ttttcataagctatttcggagaacttatgaaaataagttgaaaatagctt 7941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 183
Target Start/End: Original strand, 26630444 - 26630521
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    ||||| |||||||||||||| ||| ||||||| ||| |||||  |||| |||||||| |||||| || |||| |||||    
T  26630444 aaattgttttcatataagctataaactgttttgatacgctatcctggagaacatatggaaataaacttaaaaaagctt 26630521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 27887197 - 27887136
Alignment:
Q  116 catataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||||| |||| ||||||||||| ||||  |||| | ||||| |||||||||||||||    
T  27887197 catataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaa 27887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 33204497 - 33204436
Alignment:
Q  86 actaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||||| ||  ||| || || ||||| |||||||| |||||||||||||||||||||    
T  33204497 actaaagataaaataaagttaatttattttcgtataagctgtaagctgttttcataagctat 33204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 185
Target Start/End: Original strand, 4200161 - 4200289
Alignment:
Q  57 taagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataa 156  Q
    ||||| ||||| |||||||| ||| | |||| |||||||| ||  |||||| || |||||||||||||| ||   ||||||| |||| |||  ||||       
T  4200161 taagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggaggg 4200260  T
Q  157 catatgaaaataagctaaaaatagcttat 185  Q
    | |||||||||||||| |||| |||||||    
T  4200261 cttatgaaaataagcttaaaacagcttat 4200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 11695974 - 11696014
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    |||||||||||| ||||||||||||||  ||||||||||||    
T  11695974 cttatgctaataaataagctcaaataagtcaatccaaacag 11696014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 15360827 - 15360899
Alignment:
Q  58 aagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaag 130  Q
    |||| ||||||||| |||| ||||| |||| |||||||| ||  ||||||| | |||||||||||||| ||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 280
Target Start/End: Original strand, 17420190 - 17420356
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 211  Q
    |||||||||||||| ||| |||||||| |||||||| |  || |||  ||| ||||||| | |||| |  |||||||| ||| ||| | ||||||  |||    
T  17420190 ttttcatataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataag-ttgttttcata 17420288  T
Q  212 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||  |||||||| || | || ||||||||||| | || |||||||||| ||||  ||||||||    
T  17420289 agctcttcaaaacagtctaacaagtgtttatgctaata-aaaaactcaaataaaccaattgaaacaggc 17420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 24915128 - 24915060
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||| ||||||||||||||||||| | ||||| ||| | |||||||||| | |||| ||||||||    
T  24915128 tatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatg 24915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 25479525 - 25479633
Alignment:
Q  69 tataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    |||||| | ||||| |||| |||||||| ||   |||||||| | |||||||| ||| |||| ||||||||||||||||  | || | | ||||||||||    
T  25479525 tataagatctttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaata 25479624  T
Q  169 agctaaaaa 177  Q
    |||| ||||    
T  25479625 agctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 42174848 - 42174916
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||| |||| |||||| ||||| ||| ||||| ||| |||||||||||| |||||| ||||||||    
T  42174848 tatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatg 42174916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 172
Target Start/End: Original strand, 44422686 - 44422746
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    |||||||||||||| |||||| |||| |||||||||  |||| | | ||||||||||||||    
T  44422686 ttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 4246397 - 4246474
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||||||| || |||||||||||||||||||||| |||| | ||||| |||||||| | |||| |||||||||||    
T  4246397 ttttcatataatctataagctgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggac 4246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 277
Target Start/End: Original strand, 7148651 - 7148817
Alignment:
Q  110 tcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttcta 209  Q
    ||||| |||||||||| |||| | |||| ||||||||   |||| | | |||||||||||| | ||||||||||||||||  || ||| ||| |||||      
T  7148651 tctttacatataagctataaggtattttaataagctaccctggagagcttatgaaaataagttgaaaatagcttatggacaagtcataagtt-gtttccg 7148749  T
Q  210 taagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    |||||||| | ||||| ||| || | ||||||||| | |||||||||||||||||  ||| |||||||    
T  7148750 taagctctgctgaacactctcacaagtgcttatgcgactagataagctcaaataagtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 8010359 - 8010509
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacag 226  Q
    ||||||||||| ||||| |||  |||| ||| |||  |||||| || ||||||||||||| || ||| ||  ||| ||||||||||||||| | | || |    
T  8010359 taagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagtt-gtttctataagctctcctggactg 8010457  T
Q  227 tcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    ||| || |||| |||||| |||||||||||||| ||||  ||||||||||||    
T  8010458 tctcacaaatgtttatgccaatagataagctcacataagtcaatccaaacag 8010509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 24476541 - 24476663
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||| | ||||| || | |||||||| ||  ||| ||||| |||||||||||||  ||||| ||||| ||||||||||||||| |||  ||      
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctattttggagaacggattg 24476640  T
Q  164 aaataagctaaaaatagcttatg 186  Q
    ||||||| | |||||||||||||    
T  24476641 aaataagttgaaaatagcttatg 24476663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 282021 - 281896
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtat----aagttgtttctgtaactaaagataagatcgagtcaaattcttttcatata 121  Q
    |||||| |||| |||||| ||| | ||||||||||| |||||||||    ||| | || || |||| |||||||| ||  |||||| || ||||||||||    
T  282021 ggataagcaacataattaagcaatgatcgtataagtgtttatgtatctataagctattcctataacaaaagataaaataaagtcaacttgttttcatata 281922  T
Q  122 agctctaagctgttttcataagctat 147  Q
    |||| |||||||| ||||||||||||    
T  281921 agctataagctgtgttcataagctat 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 148
Target Start/End: Complemental strand, 29274360 - 29274276
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||||||||| | ||||| || | |||||||| ||  ||||||||| |||||||||||||| ||| ||||||||||||| ||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatatt 29274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 4006615 - 4006778
Alignment:
Q  26 ggataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagct 125  Q
    |||||| |||||||||||  |  |||| | ||||||  ||||| ||||| | ||||| |||| || ||||| ||  ||||||||| |||| |||||||||    
T  4006615 ggataagcaacttaattaatcccttatagcataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagct 4006714  T
Q  126 ctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
     |||| ||||||||||||||||    || |   |||||||||||||| |||||| |||||||||    
T  4006715 ataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggac 4006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 22742290 - 22742384
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    |||||||||||||| |||| |||||| | ||| | |||| || ||||| ||  ||||||||| |||||||||||||| |||||| |||| |||||    
T  22742290 ttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataag 22742384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 9093687 - 9093574
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||| ||||| | ||||| || | |||||||| ||  ||| ||||| ||||| |||||||| ||||||||||||||||||| | || || ||| || ||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaaga 9093588  T
Q  164 aaataagctaaaaa 177  Q
    ||||||||| ||||    
T  9093587 aaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 24782012 - 24782129
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| |||| |||||||| ||| | ||||||| |||||||||||| | ||||||  ||| |||| ||||  | || | | ||||||||||| |||||||    
T  24782012 tttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatccttgagagcttatgaaaataaactaaaaa 24782111  T
Q  178 tagcttatggacgtgtta 195  Q
    ||||||||| ||| ||||    
T  24782112 tagcttatgaacgagtta 24782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 31461756 - 31461829
Alignment:
Q  210 taagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggctta 283  Q
    |||||||||  ||||||||| || | | ||||||| |||||||||||||||||||| | || ||||||||||||    
T  31461756 taagctcttgcgaacagtctcacaagtacttatgcaaatagataagctcaaataaaccgatgcaaacaggctta 31461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 32975908 - 32976000
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||| |||||||||||||| |||||||||| ||| |||| ||  ||||||| | |||  ||| ||||  |||| ||||||||||||||||    
T  32975908 tataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctat 32976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 103542 - 103585
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacaggct 281  Q
    |||||||||||| ||||||||||||||  |||||||||||||||    
T  103542 cttatgctaatatataagctcaaataagtcaatccaaacaggct 103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 5550109 - 5550148
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcata 141  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  5550109 agtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 24836339 - 24836272
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataa 122  Q
    ||||||| |||||||||||||| ||||| |||| |||||||| ||  ||||||||| ||||| |||||    
T  24836339 tataagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 147
Target Start/End: Complemental strand, 27890010 - 27889892
Alignment:
Q  28 ataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctct 127  Q
    |||||||||||||||| ||||||||| ||| |||  ||||||| ||||| ||||| |||| | |||||| ||  | ||||| | ||||||||||||   |    
T  27890010 ataaacaacttaattaagcatttatcatatgagtgcttatgtacaagttatttctataacaacagataaaat-aattcaaactattttcatataagacat 27889912  T
Q  128 aagctgttttcataagctat 147  Q
    || | |||||||||||||||    
T  27889911 aaacagttttcataagctat 27889892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 31671163 - 31671092
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||  | |||| | |||||||||||||| ||||    
T  31671163 aaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 34430529 - 34430470
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| |||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  34430529 taaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatg 34430470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 835317 - 835267
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||| ||||||||||||||| ||||| ||| |||||||||||||| ||||    
T  835317 taagcagttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 264
Target Start/End: Original strand, 2455819 - 2455948
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 233  Q
    |||||||||||||| ||||| | | |||| ||||||| | ||||||| |||||| | ||| ||| | ||||||| |||||||||||  |||| |||  |     
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataag-ttgtttccataagctcttctaaacaatctcgca 2455917  T
Q  234 aatgcttatgctaatagataagctcaaataa 264  Q
    | |||||||||   |||||||||||||||||    
T  2455918 agtgcttatgccggtagataagctcaaataa 2455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 2735028 - 2735130
Alignment:
Q  84 taactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||| |||||||| ||  ||| ||||| ||||  ||||| || |||||||||||||||||| || ||| | ||| |||||||||||||  |||| |||||    
T  2735028 taacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagctt 2735127  T
Q  184 atg 186  Q
    |||    
T  2735128 atg 2735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 31624085 - 31624151
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||| ||||||||||||||| ||||| ||||| ||  |||||||||||| | |||| ||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatg 31624151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 277
Target Start/End: Complemental strand, 8420343 - 8420115
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||| |||||||  ||||||| ||||| ||||| |||  || ||||| ||  ||||||| | | || ||||||  | ||||||||| || ||||||||     
T  8420343 ttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctata 8420244  T
Q  149 ttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaat 248  Q
     |||| | | |||| ||||||| | |||||||||| ||||| ||| ||| | |  ||||||||||||||    |||||||| || | || |||||  |||    
T  8420243 atggagagcttatggaaataagttgaaaatagcttgtggacatgtcataagcta-tttctataagctctcactaacagtctcacaagtgtttatgtcaat 8420145  T
Q  249 agataagctcaaataaa-acaatccaaaca 277  Q
    |||||||||||||||||  |||||||||||    
T  8420144 agataagctcaaataaagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 9668096 - 9667991
Alignment:
Q  84 taactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 183  Q
    |||| |||||||| || ||||| |||| ||||||||||||||  ||  ||||||||||| || ||| ||| | | |||| ||||||| | |||| |||||    
T  9668096 taacaaaagataacatagagtcgaattgttttcatataagctacaatttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagctt 9667997  T
Q  184 atggac 189  Q
    ||||||    
T  9667996 atggac 9667991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 27924634 - 27924601
Alignment:
Q  164 aaataagctaaaaatagcttatggacgtgttata 197  Q
    |||||||||||||||| |||||||||||||||||    
T  27924634 aaataagctaaaaataacttatggacgtgttata 27924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 197
Target Start/End: Complemental strand, 28641824 - 28641747
Alignment:
Q  120 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 197  Q
    |||||| ||| |||||||||  ||||||| || | | | ||||||||||||||||||| |||||||| || |||||||    
T  28641824 taagctataaactgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgttata 28641747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 835219 - 835179
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    ||||||||| |||||||||||||||||  ||||||||||||    
T  835219 cttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 2206514 - 2206618
Alignment:
Q  49 ttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 148  Q
    ||||||||||||  ||| |||||||||| ||| | |||| |||||||| ||  |||  |||| |||| ||||||||| | | |||||| ||||||||||     
T  2206514 ttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctatgaactgtttacataagctatc 2206613  T
Q  149 ttgga 153  Q
    |||||    
T  2206614 ttgga 2206618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 3202024 - 3201956
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    ||||| || |||||| | |||||||||||| ||||||||||||||  |||||||| |||| | ||||||    
T  3202024 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacaacttatg 3201956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 4420652 - 4420735
Alignment:
Q  134 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctctt 218  Q
    ||||| |||||||| ||||| | | |||| ||||||||| |||| |||||||| || ||| |||  |||||||||||||||||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataa-tttgtttctataagctctt 4420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 170
Target Start/End: Complemental strand, 9109328 - 9109276
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||||||| |||||||||||||| | ||| |||||| ||| ||||||||||||    
T  9109328 tataagctataagctgttttcattaactaatttggagaacctatgaaaataag 9109276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 9604842 - 9604878
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggat 154  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  9604842 tataagctataagctgttttcataagttattttggat 9604878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 12111077 - 12111121
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 280  Q
    ||||||||||| |||||||||||||||||  ||||||||| ||||    
T  12111077 tgcttatgctagtagataagctcaaataagtcaatccaaataggc 12111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 24838831 - 24838791
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  24838831 aattattttcatataagctataagctgatttcataagctat 24838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 24982698 - 24982762
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 182  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| |||||   ||||||||||| ||||    
T  24982698 tatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagct 24982762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 31813174 - 31813222
Alignment:
Q  138 cataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||||||||| ||||| |||||||||||||||||| ||||  |||||||    
T  31813174 cataagctatcttggagaacatatgaaaataagctgaaaacggcttatg 31813222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 6364088 - 6364209
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||| | ||||| |||| |||||||| ||  ||| ||||||| |||| ||||||| |||||  ||||||||||||||  |||| ||| || ||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacga 6364187  T
Q  164 aaataagctaaaaatagcttat 185  Q
    ||||||||| |||| |||||||    
T  6364188 aaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 17822942 - 17822874
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||| |||| |||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatg 17822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 276
Target Start/End: Original strand, 23459615 - 23459777
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 211  Q
    ||||| |||||||| |||||||||||||||||  || ||| | ||| |||||| ||||| | |||||| |||||  || ||| ||| | || |||| |||    
T  23459615 ttttcttataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaacatgtcataagcttttttc-ata 23459713  T
Q  212 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaac 276  Q
    || ||| || |||||||||||| || ||||||||| ||||||||||||||||   ||||||||||    
T  23459714 agttctccgaaacagtcttacc-atacttatgctagtagataagctcaaatatgccaatccaaac 23459777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 42685388 - 42685476
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| ||  ||| ||||| ||||  ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||| |||||    
T  42685388 aaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaa 42685476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 2996550 - 2996637
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||||||| |||| ||||||| | |||| |||||||||||||||| ||||| | | |||||||||||| | |||| |||||||||||    
T  2996550 agtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggac 2996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 264
Target Start/End: Original strand, 28615529 - 28615662
Alignment:
Q  131 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgt-ttctataagctcttcggaacagtct 229  Q
    ||||||| ||| ||||| ||||| | | |||| ||||||| | |||||| || |||||| ||| ||| ||| || |||| ||||||||||| ||||||||    
T  28615529 ctgtttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttggtattct-taagctcttcgaaacagtct 28615627  T
Q  230 taccaatgcttatgctaatagataagctcaaataa 264  Q
    ||| ||||||||||  | |||||||||||||||||    
T  28615628 tacaaatgcttatgtcattagataagctcaaataa 28615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 8130104 - 8130192
Alignment:
Q  55 tataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    |||||||  ||| |||| |||| ||||| |||| |||||||| ||  ||||||||| |||||||||||||| ||| |||||||||||||    
T  8130104 tataagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 11802488 - 11802596
Alignment:
Q  79 ttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaat 178  Q
    |||| |||| |||||||| ||  ||||||||| || ||| |||||||  ||| ||||||||||||||||| |||| | | ||||| |||||||| ||||     
T  11802488 ttctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaac 11802587  T
Q  179 agcttatgg 187  Q
    |||||||||    
T  11802588 agcttatgg 11802596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 20031730 - 20031810
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttat 185  Q
    ||||| ||||||| |||||| ||||| |||||||||||||||||| || ||| ||||||||| |||| ||||| |||||||    
T  20031730 aaattgttttcatgtaagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaaacagcttat 20031810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 942184 - 942129
Alignment:
Q  119 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaa 174  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  942184 ataagttctaagctgttttcataagctattatggagaacttataaaaataagctaa 942129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 9841053 - 9841141
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatggacgtgttatatgtt 201  Q
    |||||||||||||| |||| ||||||||||||||||  |||  ||| | |||||||||||| ||||| ||||||||||| ||| |||||||    
T  9841053 ttttcatataagctataagatgttttcataagctatcctgg--aacttgtgaaaataagctgaaaaacagcttatggacatgtcatatgtt 9841141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 16200058 - 16199999
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||| ||| ||||||||||||||||||||| |||||  || |||||||||||||||||||    
T  16200058 tatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 36460530 - 36460605
Alignment:
Q  69 tataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagc 144  Q
    |||||||| ||||  |||| |||||||||||| || || | | |||||||||||||| ||||||||||||||||||    
T  36460530 tataagttatttcgataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataagc 36460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 49219082 - 49219161
Alignment:
Q  68 gtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||||||| ||||| |||| ||| |||| ||  ||||||||| |||||||||||||| |||| ||||||||||| ||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 55302251 - 55302308
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  55302251 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 55302308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 825552 - 825508
Alignment:
Q  133 gttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaa 825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 27043919 - 27043835
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacg 190  Q
    ||||| ||||| |||||||| |||| |||||| |||| |||| ||||| ||| |||||| |||||||||||| |  |||||||||    
T  27043919 aaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaatataagctaaaaacaatttatggacg 27043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 30207731 - 30207620
Alignment:
Q  34 aacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctg 133  Q
    |||||||||| ||| ||||| |||||||  ||||||||| |||  |||| |||| ||| |||| ||  | ||||| | |||||||||||||| |||| ||    
T  30207731 aacttaattaagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T
Q  134 ttttcataagcta 146  Q
    |||||||||||||    
T  30207632 ttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 276
Target Start/End: Original strand, 44319936 - 44320099
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 211  Q
    ||||||||||||||  ||||| |||| |||||||||  | || ||| ||||||||| || | ||||||||| |||||    | |||  |||||||  |||    
T  44319936 ttttcatataagctacaagctattttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataa-tttgttttcata 44320034  T
Q  212 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaac 276  Q
    |||||| |  |||||||| || | || |||||| ||||| |||||||||||||| ||||||||||    
T  44320035 agctctcccaaacagtctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaac 44320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 51630075 - 51630163
Alignment:
Q  89 aaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 177  Q
    |||||||| ||  ||| ||||| |||| ||||||||| |||||| |||||||||||||| ||| | ||  |||||||||||||| ||||    
T  51630075 aaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 53626729 - 53626813
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 162  Q
    ||||| |||| |||||||| ||  | ||||| | |||||||||||||| |||||||||||||||||| ||| |||| || |||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagcgattatggacaatatatg 53626813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 1706604 - 1706683
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 186  Q
    |||| ||||| || ||||| |||||||||||||||| |||| ||||| | | |||||||||||| |  ||||||||||||    
T  1706604 aattgttttcgtagaagctataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatg 1706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 22796763 - 22796806
Alignment:
Q  234 aatgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||    
T  22796763 aatgcttatgctagtagataaactcaaataaatcaatccaaaca 22796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 24160929 - 24161016
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 151  Q
    ||||||||||| | ||||| |||| || ||||| ||| ||| ||||| ||||||| || ||| |||| ||| ||||||||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcataagctattttg 24161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 155
Target Start/End: Original strand, 24444025 - 24444068
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggata 155  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  24444025 ttttcatataagctataagttgttttcataagctattgtggata 24444068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 25487544 - 25487489
Alignment:
Q  209 ataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 264  Q
    |||||||||||  |||| |||||| | ||||||||||||||||||| |||||||||    
T  25487544 ataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaataa 25487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 40174544 - 40174627
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 189  Q
    ||||| |||||||| ||||| ||||||||||||||||||||  ||||| ||| | ||| |||||| | |||| || ||||||||    
T  40174544 aaattgttttcataaaagctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttatggac 40174627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 52754581 - 52754624
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattt 149  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||    
T  52754581 aaatccttttcacataagctataagctgttttcataagctattt 52754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 53315360 - 53315478
Alignment:
Q  159 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 258  Q
    |||||||||||| |||||||||||||||||| ||| ||||| ||||||  |||||||||    || |||||||    ||||||| | | | |||||||||    
T  53315360 tatgaaaataagttaaaaatagcttatggacatgtgatatg-ttgttttcataagctctcacaaatagtcttatatgtgcttataccagtggataagctc 53315458  T
Q  259 aaataaaacaatccaaacag 278  Q
    ||||||  ||||||||||||    
T  53315459 aaataagtcaatccaaacag 53315478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 23819010 - 23819111
Alignment:
Q  45 gcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagc 144  Q
    ||||||||| || |||| |||||||||||||| ||||  |||| ||| |||| ||  ||||||| | |||||||||||| | |||  |||||||||||||    
T  23819010 gcatttatcatacaagtgtttatgtataagttatttccataac-aaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagc 23819108  T
Q  145 tat 147  Q
    |||    
T  23819109 tat 23819111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 29778776 - 29778842
Alignment:
Q  106 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    ||||| |||||||||||||| |||| |||||||||||||||  ||| | | | ||||||||||||||    
T  29778776 aaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 35571714 - 35571656
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    ||||| |||||||| ||||||||||||||||||||| || || ||| | ||||||||||    
T  35571714 ttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataag 35571656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 52735075 - 52735173
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 176  Q
    |||||||||| |||||||| ||  |||||||||  ||||||||||| | || | ||||||| |||||||| ||| | | | |||| |||||||||||||    
T  52735075 tttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagctaaaa 52735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 4071835 - 4071904
Alignment:
Q  78 tttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    ||||| |||| |||||||| ||  ||||||||| |||||||||||||| |||| |||| | |||||||||    
T  4071835 tttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 10172172 - 10172213
Alignment:
Q  236 tgcttatgctaatagataagctcaaataaaacaatccaaaca 277  Q
    |||||||||  ||||||||||||||||||| |||||||||||    
T  10172172 tgcttatgcatatagataagctcaaataaatcaatccaaaca 10172213  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 24091440 - 24091481
Alignment:
Q  102 agtcaaattcttttcatataagctctaagctgttttcataag 143  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  24091440 agtcaaattattttcatataagctataaactgttttcataag 24091481  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 24160662 - 24160545
Alignment:
Q  28 ataaacaacttaattatgcatttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctct 127  Q
    ||||||||||||||||  |  ||||| |||||||  ||||  ||||| | ||||| |||| |||||||| ||  | ||||| | ||||||| |||||| |    
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctat 24160563  T
Q  128 aagctgttttcataagct 145  Q
    ||| ||||||||||||||    
T  24160562 aagttgttttcataagct 24160545  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 26883934 - 26884039
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 163  Q
    ||||||||||||| ||||| |||  | |||||| ||  ||| ||||| |||||||||||||| ||||  |||||| ||| || | ||||| ||| |||||    
T  26883934 ttatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagtcgttttcgtaaactttattggagaacctatga 26884033  T
Q  164 aaataa 169  Q
    ||||||    
T  26884034 aaataa 26884039  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 30024623 - 30024700
Alignment:
Q  48 tttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagct 125  Q
    |||||| |||||||  ||||| ||||||| ||||| |||| |||||||| ||  ||| ||||| ||||||||||||||    
T  30024623 tttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagct 30024700  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 32421087 - 32421148
Alignment:
Q  107 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 168  Q
    |||| ||| |||||||||| ||||| |||| |||||||||||||| | ||| ||||||||||    
T  32421087 aattgtttacatataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 36048520 - 36048593
Alignment:
Q  112 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 185  Q
    |||||||||||||| |||||| |||||| ||||||| || || | | |||| ||||||||| | ||||||||||    
T  36048520 ttttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagcttat 36048593  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 52315265 - 52315220
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagct 172  Q
    |||| ||||| |||||||||||||||| ||| ||||||||||||||    
T  52315265 taagttgtttccataagctattttggaaaacttatgaaaataagct 52315220  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 3637335 - 3637299
Alignment:
Q  239 ttatgctaatagataagctcaaataaaacaatccaaa 275  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3637335 ttatgctaatagataagctcaaataagtcaatccaaa 3637299  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 35571589 - 35571549
Alignment:
Q  238 cttatgctaatagataagctcaaataaaacaatccaaacag 278  Q
    ||||||||| |||||||||||||||||  ||||||||||||    
T  35571589 cttatgctagtagataagctcaaataagccaatccaaacag 35571549  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 35958593 - 35958677
Alignment:
Q  63 tttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 147  Q
    |||||||||||| | ||||| ||||  ||| ||| ||  |||||||||  ||| |||||||||  ||||||||||||||||||||    
T  35958593 tttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctat 35958677  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 49202638 - 49202690
Alignment:
Q  118 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 170  Q
    |||||||| |||| ||||||| |||||||| |||||||||  |||||||||||    
T  49202638 tataagctataagttgttttcgtaagctatcttggataactaatgaaaataag 49202690  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 27515 - 27603
Alignment:
Q  64 ttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgg 152  Q
    ||||||||||||| ||||| ||||  ||||||| ||  ||||||||| ||||||||||| || |||| ||||||||||| |||| ||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 21353 - 21304
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaa 176  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||| ||||||    
T  21353 taagctgttttcataagctatattggagaaattatgaaaataaactaaaa 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 22233 - 22290
Alignment:
Q  127 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 184  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  22233 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 22290  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 42538 - 42639
Alignment:
Q  46 catttatcgtataagtttttatgtataagttgtttctgtaactaaagataagatcgagtcaaattcttttcatataagctctaagctgttttcataagct 145  Q
    |||||||| |||||||  ||||||||||||  ||||| |||| |||||||| || |||| |||    ||||||||||||| | || ||||||||||||||    
T  42538 catttatcatataagtgcttatgtataagtcatttctataacaaaagataaaatagagt-aaacctgtttcatataagctattagttgttttcataagct 42636  T
Q  146 att 148  Q
    |||    
T  42637 att 42639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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