View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17063_low_79 (Length: 290)

Name: NF17063_low_79
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17063_low_79
NF17063_low_79
[»] chr6 (47 HSPs)
chr6 (1-174)||(26932399-26932579)
chr6 (1-171)||(2628726-2628903)
chr6 (36-170)||(12195354-12195488)
chr6 (1-170)||(4816071-4816248)
chr6 (1-170)||(5273055-5273233)
chr6 (1-170)||(20915197-20915373)
chr6 (1-173)||(33309153-33309332)
chr6 (1-149)||(19704426-19704584)
chr6 (1-170)||(33311422-33311598)
chr6 (1-149)||(14507039-14507193)
chr6 (1-171)||(28241162-28241338)
chr6 (36-171)||(30034446-30034577)
chr6 (1-172)||(1230088-1230266)
chr6 (1-173)||(26068232-26068412)
chr6 (1-154)||(30967498-30967657)
chr6 (1-171)||(14458606-14458784)
chr6 (28-170)||(26065961-26066103)
chr6 (28-170)||(29754549-29754691)
chr6 (1-154)||(26065278-26065438)
chr6 (1-154)||(26085247-26085407)
chr6 (98-173)||(8717192-8717268)
chr6 (55-171)||(11982871-11982989)
chr6 (55-173)||(3394718-3394840)
chr6 (54-171)||(15367379-15367499)
chr6 (86-154)||(18322482-18322549)
chr6 (55-170)||(3629711-3629830)
chr6 (55-170)||(9020280-9020398)
chr6 (55-173)||(17012387-17012505)
chr6 (55-173)||(3631781-3631902)
chr6 (55-173)||(24338292-24338413)
chr6 (55-154)||(30728686-30728787)
chr6 (55-171)||(15346695-15346814)
chr6 (55-170)||(3027703-3027817)
chr6 (55-153)||(3233585-3233686)
chr6 (100-170)||(13057587-13057659)
chr6 (55-149)||(15530028-15530125)
chr6 (55-170)||(32280348-32280463)
chr6 (55-166)||(14466676-14466787)
chr6 (55-170)||(1069563-1069681)
chr6 (98-168)||(22491005-22491077)
chr6 (55-171)||(25480229-25480347)
chr6 (98-146)||(15541015-15541064)
chr6 (52-154)||(19696788-19696887)
chr6 (55-99)||(26945495-26945539)
chr6 (100-173)||(25465441-25465513)
chr6 (115-172)||(10584355-10584415)
chr6 (55-115)||(20527086-20527145)
[»] chr3 (82 HSPs)
chr3 (1-170)||(22114143-22114320)
chr3 (1-170)||(746999-747177)
chr3 (4-173)||(6065630-6065808)
chr3 (1-173)||(10621363-10621545)
chr3 (36-173)||(456193-456328)
chr3 (36-172)||(458570-458704)
chr3 (1-175)||(5522461-5522642)
chr3 (1-173)||(42990546-42990720)
chr3 (1-170)||(41849301-41849470)
chr3 (1-172)||(6063281-6063461)
chr3 (1-175)||(10955862-10956042)
chr3 (36-172)||(28412868-28413002)
chr3 (1-170)||(10191152-10191325)
chr3 (37-173)||(11168387-11168522)
chr3 (1-170)||(10084229-10084404)
chr3 (1-173)||(5191893-5192071)
chr3 (1-173)||(10958160-10958338)
chr3 (1-149)||(38890282-38890437)
chr3 (36-170)||(53893893-53894028)
chr3 (1-171)||(1321721-1321898)
chr3 (1-171)||(25389147-25389327)
chr3 (36-174)||(25533710-25533846)
chr3 (1-134)||(26720789-26720928)
chr3 (28-170)||(50494276-50494417)
chr3 (1-173)||(51726844-51727022)
chr3 (50-170)||(24980002-24980126)
chr3 (1-175)||(32219327-32219508)
chr3 (36-170)||(38210656-38210789)
chr3 (36-171)||(3859795-3859931)
chr3 (1-170)||(4103736-4103911)
chr3 (55-171)||(11170673-11170789)
chr3 (36-172)||(7606441-7606577)
chr3 (55-173)||(3314981-3315103)
chr3 (55-154)||(5886500-5886599)
chr3 (55-154)||(5899973-5900072)
chr3 (55-173)||(18099007-18099129)
chr3 (55-170)||(3307056-3307176)
chr3 (55-148)||(18096763-18096859)
chr3 (39-171)||(42992669-42992800)
chr3 (1-154)||(53917523-53917679)
chr3 (52-171)||(31151637-31151755)
chr3 (55-173)||(23633747-23633865)
chr3 (55-154)||(27635515-27635616)
chr3 (55-149)||(43228589-43228683)
chr3 (1-93)||(42992512-42992606)
chr3 (1-173)||(43226327-43226498)
chr3 (55-170)||(53915338-53915456)
chr3 (55-171)||(54691416-54691534)
chr3 (1-149)||(4308145-4308296)
chr3 (55-173)||(18162961-18163083)
chr3 (55-173)||(43423305-43423426)
chr3 (55-149)||(1313703-1313799)
chr3 (36-122)||(35919018-35919104)
chr3 (49-154)||(1626543-1626649)
chr3 (90-173)||(28101845-28101930)
chr3 (83-170)||(9604447-9604534)
chr3 (55-170)||(15781175-15781293)
chr3 (55-170)||(28181300-28181417)
chr3 (55-170)||(36012125-36012243)
chr3 (55-159)||(561635-561737)
chr3 (55-149)||(27101045-27101140)
chr3 (55-170)||(28761287-28761402)
chr3 (55-137)||(51943669-51943752)
chr3 (55-170)||(6484654-6484773)
chr3 (102-170)||(36957651-36957719)
chr3 (55-154)||(880313-880414)
chr3 (55-154)||(45883239-45883340)
chr3 (55-149)||(25688022-25688119)
chr3 (55-172)||(43421258-43421378)
chr3 (55-148)||(12267842-12267937)
chr3 (55-170)||(32263881-32263999)
chr3 (100-171)||(25635718-25635789)
chr3 (55-149)||(880107-880203)
chr3 (100-173)||(25634224-25634297)
chr3 (99-154)||(51674626-51674682)
chr3 (98-153)||(53591523-53591579)
chr3 (55-154)||(53468313-53468414)
chr3 (55-170)||(17795554-17795669)
chr3 (55-170)||(19103994-19104109)
chr3 (100-173)||(53597575-53597647)
chr3 (111-148)||(35917900-35917937)
chr3 (98-172)||(36871147-36871222)
[»] chr1 (77 HSPs)
chr1 (36-173)||(16226473-16226610)
chr1 (1-171)||(13358835-13359012)
chr1 (36-170)||(9459277-9459410)
chr1 (36-170)||(9463104-9463237)
chr1 (36-170)||(16231868-16232002)
chr1 (1-170)||(39932336-39932514)
chr1 (172-276)||(47569400-47569504)
chr1 (36-171)||(28842799-28842932)
chr1 (1-142)||(28840941-28841088)
chr1 (1-171)||(51750301-51750477)
chr1 (36-173)||(47177667-47177804)
chr1 (1-149)||(10399692-10399847)
chr1 (1-159)||(15294689-15294853)
chr1 (1-170)||(13447117-13447292)
chr1 (36-170)||(47180018-47180152)
chr1 (1-173)||(20291718-20291897)
chr1 (4-154)||(13762101-13762257)
chr1 (55-173)||(2617840-2617958)
chr1 (1-173)||(51757792-51757976)
chr1 (1-171)||(51752625-51752806)
chr1 (1-172)||(46431546-46431725)
chr1 (36-170)||(20302746-20302879)
chr1 (1-170)||(23786101-23786278)
chr1 (1-148)||(31735388-31735540)
chr1 (1-173)||(28206909-28207087)
chr1 (52-170)||(15916703-15916821)
chr1 (61-173)||(16429277-16429390)
chr1 (55-170)||(2949079-2949197)
chr1 (55-170)||(3579431-3579548)
chr1 (36-170)||(24325968-24326101)
chr1 (55-173)||(25251118-25251239)
chr1 (55-167)||(9240937-9241052)
chr1 (1-170)||(47906532-47906704)
chr1 (55-154)||(14097832-14097934)
chr1 (55-173)||(14183452-14183569)
chr1 (55-170)||(23816206-23816323)
chr1 (55-154)||(27336801-27336903)
chr1 (55-154)||(50078653-50078754)
chr1 (1-170)||(39462781-39462956)
chr1 (55-172)||(41647236-41647357)
chr1 (55-172)||(50307387-50307508)
chr1 (55-173)||(8348902-8349018)
chr1 (55-147)||(17324390-17324484)
chr1 (55-171)||(31490228-31490346)
chr1 (55-154)||(12302368-12302470)
chr1 (55-154)||(27338992-27339094)
chr1 (36-154)||(2510202-2510318)
chr1 (55-153)||(13215400-13215500)
chr1 (55-171)||(6995539-6995658)
chr1 (55-167)||(18800426-18800538)
chr1 (55-170)||(17319203-17319321)
chr1 (55-170)||(40134260-40134378)
chr1 (57-136)||(6114989-6115067)
chr1 (52-154)||(16432702-16432804)
chr1 (55-153)||(38925346-38925448)
chr1 (55-149)||(4131244-4131340)
chr1 (55-173)||(28998091-28998215)
chr1 (55-173)||(29003807-29003931)
chr1 (70-170)||(30790250-30790350)
chr1 (55-131)||(16428968-16429043)
chr1 (55-170)||(25248398-25248516)
chr1 (56-171)||(47451948-47452066)
chr1 (55-170)||(50248417-50248535)
chr1 (55-154)||(15823865-15823967)
chr1 (55-172)||(17185977-17186094)
chr1 (55-171)||(18839904-18840023)
chr1 (55-154)||(11457339-11457440)
chr1 (55-170)||(30780362-30780482)
chr1 (55-154)||(31424879-31424980)
chr1 (55-153)||(18307425-18307525)
chr1 (90-137)||(25128225-25128272)
chr1 (55-154)||(25860270-25860367)
chr1 (55-136)||(8347161-8347239)
chr1 (75-166)||(26519293-26519381)
chr1 (98-170)||(31422706-31422780)
chr1 (119-175)||(3090955-3091012)
chr1 (105-149)||(17324501-17324546)
[»] chr8 (44 HSPs)
chr8 (1-170)||(43082291-43082467)
chr8 (36-170)||(24873039-24873174)
chr8 (26-173)||(43079953-43080099)
chr8 (1-172)||(4424336-4424514)
chr8 (1-172)||(28283060-28283238)
chr8 (1-170)||(44721161-44721337)
chr8 (1-170)||(15809536-15809711)
chr8 (1-173)||(18811025-18811205)
chr8 (1-154)||(22684510-22684670)
chr8 (1-170)||(609052-609230)
chr8 (1-171)||(32339627-32339804)
chr8 (1-173)||(27827303-27827482)
chr8 (36-171)||(3874354-3874488)
chr8 (36-170)||(3883436-3883569)
chr8 (1-154)||(43530433-43530592)
chr8 (1-170)||(18813199-18813376)
chr8 (1-170)||(27829614-27829790)
chr8 (55-170)||(13858334-13858450)
chr8 (55-154)||(14808133-14808234)
chr8 (55-171)||(35872300-35872419)
chr8 (55-154)||(31162584-31162683)
chr8 (55-153)||(27106765-27106862)
chr8 (1-170)||(28251410-28251584)
chr8 (56-170)||(33541255-33541372)
chr8 (1-170)||(15073029-15073202)
chr8 (76-172)||(15956348-15956445)
chr8 (55-171)||(25952892-25953011)
chr8 (55-173)||(2467976-2468094)
chr8 (69-170)||(3005486-3005586)
chr8 (55-148)||(30480371-30480466)
chr8 (55-173)||(14419032-14419153)
chr8 (55-173)||(15068354-15068475)
chr8 (55-154)||(36865911-36866012)
chr8 (83-171)||(14477652-14477741)
chr8 (55-170)||(21482681-21482798)
chr8 (55-153)||(37214127-37214227)
chr8 (76-170)||(15185564-15185659)
chr8 (55-154)||(41383036-41383137)
chr8 (76-173)||(21480893-21480993)
chr8 (55-154)||(5372043-5372145)
chr8 (108-170)||(183246-183310)
chr8 (55-127)||(41385118-41385192)
chr8 (98-145)||(1225571-1225619)
chr8 (55-100)||(181849-181896)
[»] chr4 (87 HSPs)
chr4 (1-171)||(9173986-9174163)
chr4 (1-173)||(22132226-22132409)
chr4 (36-154)||(22782594-22782711)
chr4 (36-175)||(11006089-11006228)
chr4 (1-173)||(11008405-11008585)
chr4 (1-170)||(26085818-26085994)
chr4 (1-172)||(8631258-8631436)
chr4 (1-154)||(18709021-18709181)
chr4 (36-171)||(22780211-22780346)
chr4 (1-170)||(31849440-31849616)
chr4 (36-173)||(9176312-9176448)
chr4 (1-173)||(22134454-22134635)
chr4 (1-154)||(51015561-51015720)
chr4 (36-170)||(5198762-5198895)
chr4 (1-171)||(11437678-11437856)
chr4 (1-170)||(2484715-2484890)
chr4 (1-170)||(5635318-5635493)
chr4 (1-154)||(11435270-11435430)
chr4 (1-148)||(22044255-22044408)
chr4 (1-172)||(16931629-16931806)
chr4 (1-171)||(18847468-18847645)
chr4 (36-171)||(24348560-24348693)
chr4 (1-173)||(14789270-14789445)
chr4 (1-170)||(6765160-6765335)
chr4 (1-173)||(22046523-22046703)
chr4 (36-173)||(53405492-53405629)
chr4 (37-170)||(38409564-38409696)
chr4 (1-170)||(37089212-37089389)
chr4 (36-171)||(47868760-47868895)
chr4 (5-170)||(14787274-14787442)
chr4 (1-149)||(14633634-14633788)
chr4 (36-153)||(9148594-9148709)
chr4 (56-173)||(22802574-22802694)
chr4 (1-170)||(7941639-7941814)
chr4 (55-173)||(16453678-16453799)
chr4 (1-173)||(16933985-16934160)
chr4 (55-170)||(38928024-38928142)
chr4 (1-149)||(40637390-40637543)
chr4 (28-171)||(44599679-44599820)
chr4 (1-154)||(17662108-17662262)
chr4 (55-173)||(36921335-36921456)
chr4 (55-173)||(18409189-18409309)
chr4 (55-149)||(47210659-47210752)
chr4 (55-171)||(24446501-24446620)
chr4 (39-154)||(3824466-3824585)
chr4 (55-170)||(33415334-33415453)
chr4 (55-149)||(4215673-4215768)
chr4 (55-170)||(2891662-2891780)
chr4 (55-170)||(5664607-5664722)
chr4 (86-171)||(3937125-3937209)
chr4 (55-154)||(47563129-47563230)
chr4 (55-171)||(5101286-5101405)
chr4 (55-148)||(6133207-6133302)
chr4 (55-149)||(24889168-24889263)
chr4 (55-171)||(49088926-49089045)
chr4 (55-170)||(12102452-12102566)
chr4 (55-166)||(18534687-18534797)
chr4 (55-154)||(41997860-41997958)
chr4 (56-170)||(22800705-22800822)
chr4 (55-154)||(36919446-36919547)
chr4 (55-154)||(37312941-37313042)
chr4 (55-171)||(40091258-40091378)
chr4 (55-153)||(13547524-13547625)
chr4 (86-170)||(16455629-16455714)
chr4 (55-170)||(56030830-56030945)
chr4 (57-153)||(12395708-12395806)
chr4 (57-153)||(12400670-12400768)
chr4 (75-170)||(19323082-19323177)
chr4 (55-172)||(38890070-38890189)
chr4 (55-173)||(36378661-36378780)
chr4 (98-172)||(38269993-38270068)
chr4 (49-172)||(8756101-8756221)
chr4 (52-159)||(15032405-15032510)
chr4 (70-174)||(18537321-18537425)
chr4 (55-153)||(47275094-47275194)
chr4 (1-154)||(52942347-52942505)
chr4 (55-170)||(27499418-27499536)
chr4 (55-153)||(48486691-48486791)
chr4 (55-175)||(36380718-36380839)
chr4 (55-115)||(24879362-24879423)
chr4 (55-171)||(52043411-52043526)
chr4 (100-153)||(619316-619370)
chr4 (55-170)||(28454055-28454167)
chr4 (119-155)||(16639102-16639138)
chr4 (113-173)||(18311212-18311275)
chr4 (55-115)||(24880824-24880887)
chr4 (55-134)||(30136919-30136996)
[»] chr2 (46 HSPs)
chr2 (57-173)||(19504175-19504291)
chr2 (54-171)||(19501842-19501959)
chr2 (1-170)||(35215433-35215603)
chr2 (1-173)||(35217807-35217980)
chr2 (1-164)||(23452084-23452254)
chr2 (1-149)||(13909908-13910062)
chr2 (36-149)||(45279864-45279975)
chr2 (1-154)||(27105035-27105195)
chr2 (1-149)||(24162086-24162240)
chr2 (55-153)||(42923369-42923470)
chr2 (28-173)||(36560978-36561123)
chr2 (36-171)||(45332019-45332154)
chr2 (36-170)||(36558721-36558855)
chr2 (98-177)||(42453818-42453897)
chr2 (55-170)||(19007932-19008051)
chr2 (55-173)||(21520531-21520653)
chr2 (55-170)||(28459038-28459155)
chr2 (36-143)||(42064779-42064884)
chr2 (55-170)||(17849409-17849528)
chr2 (55-171)||(28196927-28197046)
chr2 (55-153)||(22162887-22162987)
chr2 (55-137)||(7462825-7462908)
chr2 (62-174)||(11739417-11739532)
chr2 (55-171)||(22287180-22287299)
chr2 (55-149)||(3022464-3022560)
chr2 (55-170)||(14837560-14837679)
chr2 (75-170)||(22874423-22874519)
chr2 (52-137)||(5375225-5375311)
chr2 (55-170)||(20592368-20592484)
chr2 (55-153)||(6258680-6258780)
chr2 (55-170)||(11577957-11578072)
chr2 (83-139)||(17848760-17848816)
chr2 (55-170)||(43623423-43623542)
chr2 (55-173)||(6263990-6264111)
chr2 (55-134)||(31732666-31732744)
chr2 (55-154)||(38020372-38020473)
chr2 (55-153)||(34979452-34979552)
chr2 (55-171)||(45238841-45238962)
chr2 (55-149)||(15539397-15539492)
chr2 (55-170)||(17897099-17897211)
chr2 (172-260)||(16375461-16375549)
chr2 (55-154)||(22707613-22707714)
chr2 (55-125)||(22407346-22407417)
chr2 (55-171)||(13828176-13828290)
chr2 (55-148)||(23871108-23871205)
chr2 (118-153)||(42923311-42923347)
[»] chr7 (69 HSPs)
chr7 (1-173)||(7351488-7351669)
chr7 (37-170)||(9027034-9027166)
chr7 (1-173)||(38394258-38394437)
chr7 (38-175)||(7349112-7349248)
chr7 (1-173)||(20297634-20297813)
chr7 (36-149)||(1049152-1049269)
chr7 (1-171)||(11759399-11759576)
chr7 (1-154)||(7471838-7471997)
chr7 (1-170)||(48457925-48458100)
chr7 (36-154)||(1046775-1046898)
chr7 (1-170)||(1606651-1606827)
chr7 (1-170)||(20299732-20299908)
chr7 (1-170)||(40946600-40946777)
chr7 (1-154)||(40836601-40836760)
chr7 (1-170)||(43253358-43253534)
chr7 (1-149)||(44836-44990)
chr7 (1-149)||(1850253-1850407)
chr7 (1-153)||(18345813-18345971)
chr7 (1-170)||(25542800-25542976)
chr7 (1-164)||(38396906-38397080)
chr7 (1-173)||(28485837-28486016)
chr7 (1-149)||(35901-36055)
chr7 (1-149)||(3878849-3879005)
chr7 (36-154)||(28487868-28487984)
chr7 (1-170)||(2935540-2935716)
chr7 (55-170)||(20626366-20626481)
chr7 (55-170)||(20630257-20630372)
chr7 (55-170)||(20642676-20642791)
chr7 (1-149)||(3035996-3036150)
chr7 (1-171)||(7469863-7470039)
chr7 (36-126)||(31155811-31155902)
chr7 (28-170)||(22137384-22137527)
chr7 (28-173)||(40550133-40550280)
chr7 (28-170)||(40552411-40552554)
chr7 (36-173)||(7094298-7094434)
chr7 (55-173)||(7188863-7188982)
chr7 (55-153)||(22251448-22251548)
chr7 (55-174)||(13099313-13099435)
chr7 (55-153)||(44724903-44725004)
chr7 (1-173)||(7092051-7092230)
chr7 (55-154)||(26295770-26295868)
chr7 (55-153)||(9679385-9679486)
chr7 (55-173)||(24748919-24749038)
chr7 (55-172)||(11355585-11355707)
chr7 (55-177)||(24465859-24465982)
chr7 (55-173)||(21678388-21678509)
chr7 (55-154)||(42223482-42223583)
chr7 (103-172)||(1502814-1502883)
chr7 (59-137)||(21990480-21990560)
chr7 (55-137)||(42330881-42330964)
chr7 (55-170)||(21680354-21680472)
chr7 (28-138)||(22108373-22108484)
chr7 (55-154)||(4295798-4295899)
chr7 (55-153)||(9681146-9681247)
chr7 (55-171)||(27832487-27832604)
chr7 (55-149)||(443924-444020)
chr7 (5-149)||(27306098-27306243)
chr7 (55-173)||(6349122-6349239)
chr7 (55-154)||(31434910-31435011)
chr7 (55-149)||(26804837-26804933)
chr7 (55-149)||(37411989-37412085)
chr7 (55-146)||(39145856-39145949)
chr7 (55-137)||(21592024-21592106)
chr7 (55-128)||(22394047-22394119)
chr7 (76-136)||(20091041-20091101)
chr7 (90-170)||(25276487-25276566)
chr7 (98-134)||(20137030-20137066)
chr7 (100-170)||(24813348-24813419)
chr7 (122-171)||(31153690-31153740)
[»] chr5 (69 HSPs)
chr5 (36-172)||(39798335-39798470)
chr5 (26-173)||(31543029-31543175)
chr5 (1-170)||(31179213-31179388)
chr5 (1-172)||(34476892-34477070)
chr5 (37-170)||(38959972-38960104)
chr5 (28-173)||(10749996-10750140)
chr5 (1-173)||(18466946-18467126)
chr5 (36-170)||(18469314-18469448)
chr5 (36-170)||(2175206-2175341)
chr5 (28-171)||(10757472-10757614)
chr5 (1-173)||(34479256-34479435)
chr5 (36-170)||(10587120-10587252)
chr5 (1-168)||(27912798-27912973)
chr5 (1-171)||(4410284-4410459)
chr5 (1-149)||(25921336-25921490)
chr5 (36-170)||(38882393-38882525)
chr5 (1-170)||(3372977-3373154)
chr5 (1-154)||(10528955-10529116)
chr5 (1-170)||(15552507-15552685)
chr5 (1-170)||(21684294-21684469)
chr5 (36-173)||(27910738-27910875)
chr5 (36-149)||(25804329-25804440)
chr5 (28-149)||(31545380-31545499)
chr5 (28-173)||(15356687-15356833)
chr5 (36-170)||(4236933-4237065)
chr5 (28-172)||(15354412-15354557)
chr5 (28-173)||(23665340-23665487)
chr5 (28-173)||(23793100-23793247)
chr5 (28-170)||(23741697-23741841)
chr5 (55-153)||(21948348-21948450)
chr5 (55-172)||(41585578-41585698)
chr5 (55-172)||(36402168-36402289)
chr5 (55-159)||(2818189-2818296)
chr5 (55-154)||(17818352-17818453)
chr5 (55-153)||(6756808-6756909)
chr5 (55-170)||(20054152-20054266)
chr5 (55-154)||(2724209-2724310)
chr5 (1-153)||(6747566-6747725)
chr5 (55-154)||(21289075-21289176)
chr5 (55-154)||(40221845-40221946)
chr5 (55-149)||(26098153-26098249)
chr5 (55-171)||(24127172-24127292)
chr5 (43-170)||(39854791-39854921)
chr5 (55-170)||(1189454-1189570)
chr5 (55-169)||(6661038-6661151)
chr5 (55-154)||(16776477-16776577)
chr5 (55-173)||(18511053-18511174)
chr5 (55-154)||(31465850-31465952)
chr5 (55-173)||(6745386-6745510)
chr5 (55-149)||(12555780-12555876)
chr5 (55-173)||(20505684-20505808)
chr5 (55-133)||(18509201-18509280)
chr5 (58-170)||(34530559-34530674)
chr5 (55-172)||(36208889-36209009)
chr5 (55-154)||(37705644-37705745)
chr5 (55-134)||(26098047-26098127)
chr5 (49-146)||(20045297-20045395)
chr5 (56-137)||(10474203-10474285)
chr5 (88-170)||(658204-658286)
chr5 (55-153)||(20043305-20043406)
chr5 (55-171)||(17073203-17073322)
chr5 (37-145)||(23667624-23667733)
chr5 (55-146)||(696191-696284)
chr5 (55-154)||(15445135-15445232)
chr5 (99-170)||(16092045-16092118)
chr5 (86-153)||(2954764-2954831)
chr5 (55-154)||(18596961-18597062)
chr5 (55-134)||(25904419-25904499)
chr5 (55-170)||(9020536-9020649)
[»] scaffold0127 (1 HSPs)
scaffold0127 (39-173)||(12712-12845)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-177)||(69126-69309)
[»] scaffold0250 (1 HSPs)
scaffold0250 (36-167)||(3193-3322)
[»] scaffold0267 (1 HSPs)
scaffold0267 (36-149)||(338-451)
[»] scaffold0472 (1 HSPs)
scaffold0472 (28-171)||(6505-6647)
[»] scaffold0370 (1 HSPs)
scaffold0370 (1-154)||(1310-1470)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-171)||(41324-41500)
[»] scaffold0131 (1 HSPs)
scaffold0131 (55-171)||(14230-14347)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-170)||(29441-29616)
[»] scaffold0005 (3 HSPs)
scaffold0005 (5-173)||(50289-50460)
scaffold0005 (5-170)||(52288-52456)
scaffold0005 (1-149)||(183504-183658)
[»] scaffold1674 (1 HSPs)
scaffold1674 (36-173)||(1289-1425)
[»] scaffold0140 (2 HSPs)
scaffold0140 (28-171)||(24696-24840)
scaffold0140 (28-173)||(22421-22567)
[»] scaffold0468 (1 HSPs)
scaffold0468 (55-173)||(1490-1606)
[»] scaffold0891 (1 HSPs)
scaffold0891 (37-172)||(4516-4650)
[»] scaffold0011 (1 HSPs)
scaffold0011 (63-148)||(35928-36016)
[»] scaffold0004 (1 HSPs)
scaffold0004 (55-173)||(80186-80308)
[»] scaffold0031 (1 HSPs)
scaffold0031 (55-154)||(79512-79614)
[»] scaffold0045 (1 HSPs)
scaffold0045 (55-154)||(85554-85656)
[»] scaffold0154 (1 HSPs)
scaffold0154 (55-149)||(11337-11434)
[»] scaffold0339 (1 HSPs)
scaffold0339 (55-153)||(4319-4419)
[»] scaffold0057 (1 HSPs)
scaffold0057 (63-170)||(16501-16607)
[»] scaffold1899 (1 HSPs)
scaffold1899 (110-154)||(1-45)
[»] scaffold0256 (1 HSPs)
scaffold0256 (119-173)||(16605-16659)


Alignment Details
Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 26932579 - 26932399
Alignment:
Q  1 accgaactgggtcaacaaatttct---gtgttcttctc----gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacact 93  Q
    ||||||||||||||||||||||||   ||||||||||     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26932579 accgaactgggtcaacaaatttcttttgtgttcttcttctttgtgttcttctcgccgttgtttttctacctttggcttgtatttataactttcatacact 26932480  T
Q  94 ttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatta 174  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||  ||||||||||||||    
T  26932479 ttg-ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcaaattcacaacaatta 26932399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 2628903 - 2628726
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||| ||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  2628903 accgaattgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataacttccatacac 2628805  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  2628804 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaa 2628726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 12195488 - 12195354
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  12195488 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgctttgattttggttgcttaattatcccttgctccacacatcaag 12195390  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  12195389 ttgttattggtgtgatttttcatcgaattcacaaca 12195354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 4816248 - 4816071
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||||||||||||| ||||||||||    || |||||||    
T  4816248 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttgacttgtatttaattgttccatacac 4816149  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  4816148 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaaca 4816071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5273233 - 5273055
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctcgt------gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||||||||||||  ||||||||||  |      |||||||||||||||||||| |||||||||||||||||||| || || |||||||    
T  5273233 accgaactgggtcaacaaatttctcagtgttcttcttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaaaaattacatacac 5273135  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaaca 170  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||    
T  5273134 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 5273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 20915373 - 20915197
Alignment:
Q  1 accgaactgggtcaacaaatt-tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacact 93  Q
    ||||||||||||||||||||| ||||||||||||||      |||||||||||| ||||||||||||||||||||||||||||||    |||||||||||    
T  20915373 accgaactgggtcaacaaattctctgtgttcttctcttctttgtgttcttctcgtcgttgtttttctacttttggcttgtatttaattatttcatacact 20915274  T
Q  94 ttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  20915273 ttgtttt-ggttgcttgattaccccttgccccacacatcaagttattattggtgtgatttttgatcagattcacaaca 20915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 33309153 - 33309332
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--------tcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||||| |||        ||||||  ||||||||||||||||||||| ||||||||||||||||||||    || ||||| |    
T  33309153 accgaactgggtcaacaaatttctttgtgttcttcttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgc 33309251  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  33309252 tttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacaatt 33309332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19704584 - 19704426
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgttttt-ctacttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||||||||||||| ||||||||||||||||||||    || ||||||    
T  19704584 accgaactgggtcaacaaattattttgtgttcttctcttctttgtgttcttctcgccgttgttttttctacttttggcttgtatttaattgttccataca 19704485  T
Q  92 ctttg-tttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19704484 ctttgatttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 19704426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 33311422 - 33311598
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--------tcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||||| |||        ||||||  ||||||||||||||||||||| ||||||||||||||||||||    || ||||| |    
T  33311422 accgaactgggtcaacaaatttctttgtgttcttcttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgc 33311520  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  33311521 tttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaaca 33311598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 14507193 - 14507039
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  14507193 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 14507095  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14507094 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 14507039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 28241338 - 28241162
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||| ||||||||||||| ||||||||||||||||||||    || |||||||    
T  28241338 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttttcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 28241240  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  28241239 tttgtttt-gattgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacaa 28241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 30034577 - 30034446
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||    
T  30034577 gtgttcttctcgccattgtttt-ctacttttagcttgtatttataactttcatacactttg--tttggttgcttgattat-ccttgctccatacatcaag 30034482  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||||||||| |||| |||| |||| ||||||    
T  30034481 ttgttattggtgtgattttcatcgaattcgcaacaa 30034446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 1230266 - 1230088
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggctt-gtatttataactttcataca 91  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||||||||||||  |||||||||||| |||||||    |||||||||    
T  1230266 accgaactgggtcaacaaattcttttgtgttcttctcttcattgtgttcttctcgccgttgtttta-tacttttggctttgtatttaattgtttcataca 1230168  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||| |||| |||||||    
T  1230167 ctttatttt-ggttgcttgattatctcttgatccacacatcaagttgttattggtgtgatttttatcgaattcgcaacaat 1230088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26068412 - 26068232
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--------tcttctcgtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||||| |||        ||||||  |||||||||||| |||||||| |||||||| ||||||||||||    || |||||     
T  26068412 accgaactgggtcaacaaatttctttgtgttcttcttcttcttttgttcttctcgcagttgtttt-ctactttttggcttgtatttaattgttccatacg 26068314  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  26068313 ctttgtttt-ggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 26068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30967498 - 30967657
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||| ||||||||||    || ||| |||    
T  30967498 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttgacttgtatttaattattccatgcac 30967596  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| ||||    
T  30967597 tttgtttt-ggttacttgattatctcttgctccacacatcaagttgttattggtgtgatttt 30967657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14458784 - 14458606
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||| ||||||||| ||||||||||||||||||||    || |||||||    
T  14458784 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgtcgttgtttt-ctacttttggcttgtatttaattgttccatacac 14458686  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||| |||||||||| ||||||||| || |||||||||||||| | ||||||||||| ||||| |||| |||| ||||||    
T  14458685 tttgattttggttgcctgattatccattactccacacatcaagctattattggtgtgatttttcatcgaattcgcaacaa 14458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 26066103 - 26065961
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||||| |||||||| |||||||| ||||||||||||    || ||||| ||||||||| |||||||| ||||||||||||||||    
T  26066103 ttcttcttttgttcttctcgcagttgtttt-ctactttttggcttgtatttaattgttccatacgctttgtttt-ggttgcttaattatcccttgctcca 26066006  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||    
T  26066005 cacatcaagttgttattggtgtgatttttcatcgaattcacaaca 26065961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 29754691 - 29754549
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||||| |||||||| |||||||| |||| |||||||    || ||||| ||||||||| |||||||||||||||||||||||||    
T  29754691 ttcttcttttgttcttctcgcagttgtttt-ctactttttggctcgtatttaattgttccatacgctttgtttt-ggttgcttgattatcccttgctcca 29754594  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||    
T  29754593 cacatcaagttgttattggtgtgatttttcatcgaattcacaaca 29754549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 26065278 - 26065438
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct----tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacac 92  Q
    |||||||||||||||||||||  | ||||||||    |||  ||||||||| || |||||||| ||||||||||| |||  |||||||| |  ||||| |    
T  26065278 accgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgtttt-ctacttttggcatgtgattataactgttccatacgc 26065376  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26065377 tttgattttggttgcttgactatcccttgctccacacatcaagttgttattggtgtgatttt 26065438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 26085247 - 26085407
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct----tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacac 92  Q
    |||||||||||||||||||||  | ||||||||    |||  ||||||||| || |||||||| ||||||||||| |||  |||||||| |  ||||| |    
T  26085247 accgaactgggtcaacaaattattttgtgttctctattcttttgttcttcttgctgttgtttt-ctacttttggcatgtgattataactgttccatacgc 26085345  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26085346 tttgattttggttgcttgactatcccttgctccacacatcaagttgttattggtgtgatttt 26085407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 8717268 - 8717192
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 8717192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 11982989 - 11982871
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tt 151  Q
    |||||||||||||||||||  || ||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  11982989 ttttctacttttggcttgtgattgtaattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagttgttattggtgtgatt 11982891  T
Q  152 tttgatcggattcacaacaa 171  Q
    ||| |||| |||||||||||    
T  11982890 tttcatcgaattcacaacaa 11982871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 3394718 - 3394840
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||||||    
T  3394718 ttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagatttttattggtgtgtt 3394817  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||| ||||||||    
T  3394818 ttctcatcgaattcgcaacaatt 3394840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 15367379 - 15367499
Alignment:
Q  54 tttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg- 149  Q
    |||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||     
T  15367379 tttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacatgctccacacatcaagtttgttattggtgtga 15367477  T
Q  150 tttttgatcggattcacaacaa 171  Q
    ||||| |||| |||||||||||    
T  15367478 tttttcatcgaattcacaacaa 15367499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 18322482 - 18322549
Alignment:
Q  86 catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18322482 catacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 18322549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 3629830 - 3629711
Alignment:
Q  55 ttttctactttt-ggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 150  Q
    |||||||||||| ||||||| ||||||| | |  ||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  3629830 ttttctactttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgt 3629732  T
Q  151 ttt-tgatcggattcacaaca 170  Q
    ||| | |||| ||||||||||    
T  3629731 tttctcatcgaattcacaaca 3629711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 9020280 - 9020398
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||||||||||| | |  ||||||||||||||| |||||  |||||||| |||||||||||||||||| |||||||||||||| |    
T  9020280 ttttctacttttggcttgtatttataattgttccatacactttgtttt-ggttgtctgattatctcttgctccacacatcaagtttgttattggtgtgat 9020378  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| |||| |||||    
T  9020379 ttttcatcgaattcgcaaca 9020398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 17012387 - 17012505
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg-ttt 152  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||||||||   |||||||||||||||||| | |||||| |||| |||    
T  17012387 ttttctacttttggcttgtgttt-taacgttcatacactttgtttt-ggttgcttgattattatttgctccacacatcaagtattttattgttgtgattt 17012484  T
Q  153 ttgatcggattcacaacaatt 173  Q
    || |||| |||||||||||||    
T  17012485 ttcatcgaattcacaacaatt 17012505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 3631902 - 3631781
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||| | |||||| |||||||||||| ||||| |||||||||||||| |    
T  3631902 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcctaattatcacttgctccacacgtcaagtttgttattggtgtgtt 3631804  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||||||||||||    
T  3631803 ttttcatcgaattcacaacaatt 3631781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 24338413 - 24338292
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||| |||| ||||||| | |  ||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||| |||| |    
T  24338413 ttttctacttttggtttgtgtttataattgttccatacactttgtttt-ggttgcttgactatctcttgctccacacatcaagtttgttattgatgtgat 24338315  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||||||||||||    
T  24338314 ttttcatcgaattcacaacaatt 24338292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 30728787 - 30728686
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||||||||||| | |  ||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||| |    
T  30728787 ttttctacttttgacttgtatttataattgttccatacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttgttattggtgtgat 30728689  T
Q  152 ttt 154  Q
    |||    
T  30728688 ttt 30728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 15346695 - 15346814
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  |||| |||||||||| ||||||||||||||| |||| ||||||||||||| |||||||||||||| |    
T  15346695 ttttctacttttggcttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgat 15346793  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| ||| |||||||    
T  15346794 ttttcatcgaatttacaacaa 15346814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 3027817 - 3027703
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    ||||||||||||| |||||||||||||||| |||||||||  | |||||||||| ||||||  ||||||||||||||||| |  |||| |||||| ||||    
T  3027817 ttttctacttttgacttgtatttataacttccatacactt--tatttggttgctcgattattacttgctccacacatcaaatatttatcggtgtgatttt 3027720  T
Q  154 tgatcggattcacaaca 170  Q
    | || | ||||||||||    
T  3027719 tcattgaattcacaaca 3027703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 3233686 - 3233585
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    |||||||||||||| |||| ||||||| |  ||||| ||||||| |||||||||| |||||||| ||| ||||||||||| || ||||||||| ||||||    
T  3233686 ttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttactccacacatcaaatttgttattgatgtgtt 3233587  T
Q  152 tt 153  Q
    ||    
T  3233586 tt 3233585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 13057587 - 13057659
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  13057587 ttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 13057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 15530125 - 15530028
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||||||||||||||||||||||||   || |||||||||   ||||| |||  ||||||| |||| |||||||||||||| ||||||||||||||    
T  15530125 ttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattccttactccacacatcaagtttgttattggtgtg 15530028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 32280348 - 32280463
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    ||||||||||||||||||||||||||| | | |  |||||   | ||||||||||||||||| ||| ||||| |||||||| |||||||| ||||| |||    
T  32280348 ttttctacttttggcttgtatttataattgttacccacttg--tattggttgcttgattatcacttactccatacatcaagtttgttatttgtgtgattt 32280445  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||||||||||    
T  32280446 tttatcgaattcacaaca 32280463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 14466676 - 14466787
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-ttt 152  Q
    |||||||||||||  ||||  |||||||||||||||| |||||||| |||||||||| |||| |||||| |||||||| || || ||||||||||| |||    
T  14466676 ttttctacttttgt-ttgtgattataactttcatacattttgtttt-ggttgcttgactatcacttgctgcacacatcaaatttattattggtgtgattt 14466773  T
Q  153 ttgatcggattcac 166  Q
    || |||| ||||||    
T  14466774 ttcatcgaattcac 14466787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 1069681 - 1069563
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    |||||||||||| |||||| ||||||| | |  ||||||||||||||| | |||||||| |||||||||||||| ||||| || ||||||||||| | ||    
T  1069681 ttttctactttttgcttgtgtttataattgttccatacactttgtttt-gattgcttgactatcccttgctccatacatcgaatttgttattggtatatt 1069583  T
Q  152 tt-tgatcggattcacaaca 170  Q
    || | |||| ||||||||||    
T  1069582 ttctcatcgaattcacaaca 1069563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 22491005 - 22491077
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaa 168  Q
    |||||||||||||||||||| | ||||||||||| ||| |||||||||||||| ||||| |||| ||||||||    
T  22491005 ttttggttgcttgattatccttagctccacacattaagtttgttattggtgtgatttttcatcgaattcacaa 22491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 25480229 - 25480347
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tt 151  Q
    ||||||||||||| |||||  |||||| |  |||||||||||| |||| ||||||| || |||||||| ||| ||||||||| |  ||||||||||| ||    
T  25480229 ttttctacttttgacttgtgattataattgtttcatacactttatttt-ggttgctcgactatcccttactctacacatcaaatatttattggtgtgatt 25480327  T
Q  152 tttgatcggattcacaacaa 171  Q
    ||| |||| |||||||||||    
T  25480328 tttcatcgaattcacaacaa 25480347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 15541064 - 15541015
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 146  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  15541064 ttttggtttcttgactatcccttgctccacacatcaagtttgttattggt 15541015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 19696788 - 19696887
Alignment:
Q  52 tgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgt 150  Q
    ||||||||||||||||  |||| ||||||||| |||  ||||||||||  |||||||||||||  | |||||||||||||||||| | |||||||||||     
T  19696788 tgtttttctacttttgt-ttgtgtttataactgtcacccactttgtttc-ggttgcttgatta--ctttgctccacacatcaagtattttattggtgtga 19696883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 26945495 - 26945539
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgttt 99  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||    
T  26945495 ttttctacttttggcttgtgtttataacttccttacactttgttt 26945539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 25465513 - 25465441
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||   |||||||| ||||||||| | ||||||||||| |||| |||| |||||||||||||    
T  25465513 ttggttgcttgattatt--ttgctccatacatcaagtattttattggtgtgattttcatcgaattcacaacaatt 25465441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 10584355 - 10584415
Alignment:
Q  115 tcccttgctccacacatcaag-ttgttattggtgtg--tttttgatcggattcacaacaat 172  Q
    ||||||||||||||||||||| ||||||||||||||  ||| | |||| ||||||||||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaat 10584415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 20527086 - 20527145
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattat 115  Q
    ||||||||||||| ||||| ||||||||| |||   ||||| |||||||||||||||||||    
T  20527086 ttttctacttttg-cttgtgtttataactgtcaccaactttatttttggttgcttgattat 20527145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 22114320 - 22114143
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22114320 accgaactgggtcaacaaattcttttgtgttcttctcttttttgtgttcttctcgccgttttttttctacttttggcttgtatttataactttcatacac 22114221  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||| |||| |||||    
T  22114220 tttgattttggttgcttgattatcccttgctccacacatcaagttgctattggtgtgattttcatcgaattcgcaaca 22114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 746999 - 747177
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||||||||||||||  ||||||||||        ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  746999 accgaactgggtcaacaaatttctttgtgttcttcttcttctttgtgttcttctcgcagttgtttt-ctacttttggcttgtatttataactttcataca 747097  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  747098 ctttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 747177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 6065808 - 6065630
Alignment:
Q  4 gaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactt 94  Q
    |||||||||||||||||||||  |||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6065808 gaactgggtcaacaaatttctttgtgttcttctccttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactt 6065710  T
Q  95 tgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  6065709 tgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaatt 6065630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10621545 - 10621363
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||||||||||||||  ||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10621545 accgaactgggtcaacaaatttctttgtgttcttcttcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcataca 10621447  T
Q  92 ctttg-tttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  10621446 ctttggtttttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 10621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 456193 - 456328
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  456193 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgctttgtttt-ggttgcttgattatcccttgctccacacatcaag 456290  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||||||||| |||| |||| |||||||||||||    
T  456291 ttgttattggtgtgattttcatcgaattcacaacaatt 456328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 458570 - 458704
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  458570 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgctttgtttt-ggttgcttgattatcccttgctccacacatcaag 458667  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||||||||| |||| |||| ||||||||||||    
T  458668 ttgttattggtgtgattttcatcgaattcacaacaat 458704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 5522642 - 5522461
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  5522642 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcttacac 5522544  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaattat 175  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | || |||| ||||| ||||    
T  5522543 tttgattttggttgcttgactatcccttgctccacacatcaagttgttattggtgtgattttcaacgaattcgcaacatttat 5522461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42990546 - 42990720
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgt 97  Q
    |||||||||||||||||||||  | |||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||     
T  42990546 accgaactgggtcaacaaattcttttgtgttctctctccttttcttctcgccgttgtttt-ctacttttggcttgtatttataacttacatacactttg- 42990643  T
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||| ||||||||    
T  42990644 ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcgcaacaatt 42990720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 41849301 - 41849470
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttcttctcgc-cgttgtttttctacttttggcttgtatttataactttcatacactttgt 97  Q
    |||||||||||||||||||||  | |||||||| ||| | || ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41849301 accgaactgggtcaacaaattcttttgtgttct-ctcttctttttctctctcgttgtttt-ctacttttggcttgtatttataactttcatacactttgt 41849398  T
Q  98 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  41849399 ttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 41849470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6063461 - 6063281
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||| ||||||||||  |||||||||||       |||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  6063461 accgaactgggtccacaaatttctttgtgttcttctccttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacg 6063363  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||| |||| |||| |||||||    
T  6063362 ctttgattttggttgcttaattatcccttgttccacacatcaagttgttatcggtgtgatttttcatcgaattcgcaacaat 6063281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 10956042 - 10955862
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  10956042 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 10955944  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaattat 175  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| ||||    
T  10955943 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacatttat 10955862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 28413002 - 28412868
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||    
T  28413002 gtgttcttctcgccgttgtttt-ctacttttgacttgtatttataactttcatacacttg--ttttggttacttgattatcccttgctccacacatcaag 28412906  T
Q  136 ttgttattggtgtgt-ttttgatcggattcacaacaat 172  Q
    ||||||||||||||| |||| |||| ||||||||||||    
T  28412905 ttgttattggtgtgttttttcatcgaattcacaacaat 28412868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10191325 - 10191152
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactt 94  Q
    |||||||||||||||||||||  ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    |  |||||||||    
T  10191325 accgaactgggtcaacaaattattgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgtcccatacactt 10191227  T
Q  95 tgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| |||||    
T  10191226 tgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcagattcgcaaca 10191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 173
Target Start/End: Original strand, 11168387 - 11168522
Alignment:
Q  37 tgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11168387 tgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagt 11168485  T
Q  137 tgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    ||||||||||||| |||| |||| |||| ||||||||    
T  11168486 tgttattggtgtgattttcatcgaattcgcaacaatt 11168522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10084404 - 10084229
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    |  |||||||    
T  10084404 accgaactgggtcaacaaattattttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgtcccatacac 10084306  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  10084305 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcggattcgcaaca 10084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 5191893 - 5192071
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||| ||||||| ||||||||||||||||||||    || |||||||    
T  5191893 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccattgtttt-ctacttttggcttgtatttaattgttccatacac 5191991  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||| ||||    
T  5191992 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaataatt 5192071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 10958338 - 10958160
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | | ||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    ||  ||||||    
T  10958338 accgaactgggtcaacaaattcttttatgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttctatacac 10958240  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||||||||    
T  10958239 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacaatt 10958160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 38890282 - 38890437
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || ||||| |    
T  38890282 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgc 38890380  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38890381 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 38890437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 53894028 - 53893893
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggctt-gtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||||||||||||||||||||||||| |||||||    || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53894028 gtgttcttctcgccgttgtttttctacttttggctttgtatttaattattccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaa 53893930  T
Q  135 gttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||| |||| ||||| ||| ||||||    
T  53893929 gttgttattggtgtgattttcgatcgaatttacaaca 53893893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 1321721 - 1321898
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  1321721 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 1321819  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||| ||||||    
T  1321820 tttgtttt-ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcgcaacaa 1321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25389147 - 25389327
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatac 90  Q
    ||||||||||||||||||||||||  |||||||||||       || ||||||||||||||||||| |||||||| ||||||||||||    || |||||    
T  25389147 accgaactgggtcaacaaatttctttgtgttcttctcttcttttgtattcttctcgccgttgtttt-ctactttttggcttgtatttaattattccatac 25389245  T
Q  91 actttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaacaa 171  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| |||| |||||||||||    
T  25389246 actttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtatgattttttcatcgaattcacaacaa 25389327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 25533710 - 25533846
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||| ||| ||||||||||||||||||    
T  25533710 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgat-atctcttgctccacacatcaag 25533806  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaatta 174  Q
    |||||||||||||| ||||| |||| |||| |||||||||    
T  25533807 ttgttattggtgtgatttttcatcgaattcgcaacaatta 25533846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26720789 - 26720928
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||| ||||||  | ||||||||||||      |||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||    
T  26720789 accgaactgggtcaccaaattcttttgtgttcttctcttctttgtgttcttctcgtcgttctttt-ctacttttggcttgtatttataacttccatacac 26720887  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  26720888 tttg-ttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 50494276 - 50494417
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||||||| |||||||| |||||| ||||||||||    
T  50494276 ttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgctttgtttt-ggttgcttaattatctcttgctccac 50494373  T
Q  128 acatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||    
T  50494374 acatcaagttgttattggtgtgatttttcatcgaattcacaaca 50494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 51727022 - 51726844
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||| ||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  51727022 accgaactaggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 51726924  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||| |||||||||| ||||||| | |||| |||||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  51726923 tttgattttggttgcctgattattc-ttgccccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaatt 51726844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 24980002 - 24980126
Alignment:
Q  50 gttgtttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 146  Q
    |||||||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  24980002 gttgtttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggt 24980101  T
Q  147 gtgtttt-tgatcggattcacaaca 170  Q
    ||||||| | |||| ||||||||||    
T  24980102 gtgttttctcatcgaattcacaaca 24980126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 32219327 - 32219508
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| ||||||||||||||| ||||||| | |  ||||||||||    
T  32219327 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacacttt 32219425  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg--tttttgatcggattcacaacaattat 175  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||| |||||  ||||| |||| |||||||||||||||    
T  32219426 gattttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgattttttcatcgaattcacaacaattat 32219508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 38210656 - 38210789
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||||||| | ||| ||||| ||||||||||||||||||||||    
T  38210656 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgctttgtttt-gtttgtttgataatcccttgctccacacatcaag 38210753  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  38210754 ttgttattggtgtgatttttcatcgaattcacaaca 38210789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 3859795 - 3859931
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatca 133  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |  ||||||||||||||||| |||||||| | ||||||||  |||||||||||    
T  3859795 gtgttcttctcgccgttgtttt-ctacttttggcttgtattt-taattgtttcatacactttgtttt-ggttgcttaactatcccttattccacacatca 3859891  T
Q  134 agttgttattggtgtg--tttttgatcggattcacaacaa 171  Q
    ||||||||||||||||  |||| ||||| |||||||||||    
T  3859892 agttgttattggtgtgacttttcgatcgaattcacaacaa 3859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 4103911 - 4103736
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||    
T  4103911 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgttttt-tacttttgacatgtatttataacttccatacac 4103813  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||| |||| ||||| |||| ||| ||||||||||| ||||||| |||||||||||||| |||| |||| |||| |||||    
T  4103812 ttt-ttttcggttgtttgactat-ccttgctccacgcatcaagtttgttattggtgtgattttcatcgaattcgcaaca 4103736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 11170673 - 11170789
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||||||||||||    || ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||    
T  11170673 ttttctacttttggcttgtatttaattattccatacactttgattttggttgcttgattatcccttactccacacatcaagttgttattaatgtgatttt 11170772  T
Q  155 gatcggattcacaacaa 171  Q
     |||| |||| ||||||    
T  11170773 catcgaattcgcaacaa 11170789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 7606577 - 7606441
Alignment:
Q  36 gtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    ||||||||||||| |||||||| |||||||| ||| ||||||||    || ||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  7606577 gtgttcttctcgctgttgtttt-ctactttttggcctgtatttaattgttccatacactttgattttggttgcttgactatctcttgctccacacatcaa 7606479  T
Q  135 gttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||||||||| ||||| |||| |||  |||||||    
T  7606478 gttgttattggtgtatttttcatcgaatttgcaacaat 7606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 3314981 - 3315103
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||| |||||||||| ||||||| | |  ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  3314981 ttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgtt 3315080  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||| ||||||||    
T  3315081 ttctcatcgaattcgcaacaatt 3315103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 5886500 - 5886599
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttt 152  Q
    |||||||||||||||||||  |||||||| |  ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  5886500 ttttctacttttggcttgtgattataactgttccatacactttgttt--ggttgcttgtttatcccttgctccacacatcaagttgttattggtgtgatt 5886597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 5899973 - 5900072
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttt 152  Q
    |||||||||||||||||||  |||||||| |  ||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  5899973 ttttctacttttggcttgtgattataactgttccatacactttgttt--ggttgcttgtttatcccttgctccacacatcaagttgttattggtgtgatt 5900070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 18099129 - 18099007
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| |||| || | |  ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  18099129 ttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 18099030  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||| ||||||||    
T  18099029 ttttcatcgaattcccaacaatt 18099007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 3307056 - 3307176
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgtgt 150  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||||| ||| |||||||||||||||| || ||||||||  |||||||||||||||    
T  3307056 ttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcccttgcttcatacatcaagttttgttattggtgtgt 3307155  T
Q  151 ttt-tgatcggattcacaaca 170  Q
    ||| | |||| ||||||||||    
T  3307156 tttctcatcgaattcacaaca 3307176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 18096859 - 18096763
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 148  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  18096859 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgt 18096763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 42992669 - 42992800
Alignment:
Q  39 ttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-tt 137  Q
    ||||||||||| ||||||| || |||||| | | |||||||||||| ||||||||||||||| |||||  |||||||||||||||| |||||||||| ||    
T  42992669 ttcttctcgccattgtttt-ctgcttttgacatatatttataacttccatacactttgtttt-ggttgtctgattatcccttgctctacacatcaagttt 42992766  T
Q  138 gttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||| ||||| |||| |||| |||||||||||    
T  42992767 gttattagtgtgattttcatcgaattcacaacaa 42992800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 53917679 - 53917523
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttct-tctcgccgttgtttttctacttttggcttgtatttataact--ttcatacacttt 95  Q
    |||||||||||||||||||||  | |||||||| ||| | || | |||||| |||||||| ||||||||||||||| ||||||| |  ||||||||||||    
T  53917679 accgaactgggtcaacaaattcttttgtgttct-ctcttcttttctctcgctgttgtttt-ctacttttggcttgtgtttataattgtttcatacacttt 53917582  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 154  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||    
T  53917581 gtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattagtgtgatttt 53917523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 52 - 171
Target Start/End: Original strand, 31151637 - 31151755
Alignment:
Q  52 tgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-t 150  Q
    |||||||||||| ||  ||||| |||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||  ||||||||||| |    
T  31151637 tgtttttctactctta-cttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtatttattggtgtgat 31151734  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| |||||||||||    
T  31151735 ttttcatcgaattcacaacaa 31151755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 23633747 - 23633865
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    |||||||||| |||||||| ||||||| || ||||||||||| |||||||||||||||| || |||||| |||||||| |||  ||||||||||| ||||    
T  23633747 ttttctacttgtggcttgtgtttataaattccatacactttg-ttttggttgcttgattttcacttgcttcacacatctagtatttattggtgtgatttt 23633845  T
Q  154 tgatcggattcacaacaatt 173  Q
    | |||| |||||||||||||    
T  23633846 tcatcgaattcacaacaatt 23633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 27635616 - 27635515
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  27635616 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgat 27635518  T
Q  152 ttt 154  Q
    |||    
T  27635517 ttt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 43228589 - 43228683
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||||||| ||||||||||||||| ||| | |  ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43228589 ttttctaattttggcttgtattt-taattgttccatacactttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtg 43228683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42992512 - 42992606
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacact 93  Q
    |||||||||||||||||||||| |  ||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  42992512 accgaactgggtcaacaaatttttttgtgttctctctccttttcttctcgccgttgtttt-ctacttttggcttgtatttataacttccatacact 42992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 43226327 - 43226498
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgttct-tct-cgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacactttg 96  Q
    |||||||||||||||||||||  |||||||| ||| | | |||| ||||| |||||||  ||||||||||||||||||| ||| | |  |||||||||      
T  43226327 accgaactgggtcaacaaattcttgtgttctctcttccttttct-ctcgctgttgttt--ctacttttggcttgtattt-taattgttccatacacttg- 43226421  T
Q  97 tttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||| |||| ||||||||    
T  43226422 -ttttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttctcatcgaattcgcaacaatt 43226498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 53915456 - 53915338
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| |  ||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||||||||| |    
T  53915456 ttttctacttttggcttgtgtttataattgtttcatacacttggtttt-ggttgcttgactatcccttgctccatacatcaagtttgttattggtgtgat 53915358  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| |||| |||||    
T  53915357 ttttcatcgaattcgcaaca 53915338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 54691534 - 54691416
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttt 152  Q
    ||||||||||||||||||| ||||||| |  |||||||| |||||||| |||||| |||||||| |||||||||||||| || ||||||||| |||||||    
T  54691534 ttttctacttttggcttgtgtttataattgtttcatacattttgtttt-ggttgcctgattatcacttgctccacacataaatttgttattgatgtgttt 54691436  T
Q  153 t-tgatcggattcacaacaa 171  Q
    | | |||| |||||||||||    
T  54691435 tctcatcgaattcacaacaa 54691416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 4308296 - 4308145
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| |||||||||||||||  |||||| | |  ||||||||||    
T  4308296 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctacttttggcttgtgattataattgttccatacacttt 4308198  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||||| ||||| | |||||| |||||||||||||||||||||||||||||||||    
T  4308197 gtttt-ggttgttggattattccttgctccacacatcaagttgttattggtgtg 4308145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 18162961 - 18163083
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||| ||||||||||| || || ||||||||||| |    
T  18162961 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtgat 18163060  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| ||||| |||||||    
T  18163061 ttttcatcgaattcataacaatt 18163083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 43423426 - 43423305
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaa-gttgttattggtgt-gt 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||||||||||  |    
T  43423426 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaactttgttattggtgtaat 43423328  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||| ||||||||    
T  43423327 ttttcatcgaattcgcaacaatt 43423305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 1313703 - 1313799
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  1313703 ttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtg 1313799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 35919104 - 35919018
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgc 122  Q
    |||||||||||||||||||||||||||||||||||| ||||||    || ||||||||||| |||||||||  ||||||||||||||    
T  35919104 gtgttcttctcgccgttgtttttctacttttggcttctatttaattgttccatacactttgattttggttgtctgattatcccttgc 35919018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 1626649 - 1626543
Alignment:
Q  49 cgttgtttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 145  Q
    ||||||||||| ||||||| ||||| ||||||| | |  ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  1626649 cgttgtttttc-acttttgacttgtgtttataattgttccatacactttgtttttg-ttgcttgattattccttgctccacacatcaagtttgttattgg 1626552  T
Q  146 tgtgttttt 154  Q
    |||| ||||    
T  1626551 tgtggtttt 1626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 28101930 - 28101845
Alignment:
Q  90 cactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt-gtttttgatcggattcacaacaatt 173  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||| |||| |||||||||||||    
T  28101930 cactttgattttggttgcttgattatcccttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaacaatt 28101845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 9604534 - 9604447
Alignment:
Q  83 tttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  9604534 tttcatacactttggttt-ggttacttgattattccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 9604447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 15781175 - 15781293
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||||| |  |||||||||| |||| |  |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  15781175 ttttctacttttgacttgtgtttataactgttccatacactttatttt-gcctgcttgattatcccttactccacacatcaagtttgttattggtgtgtt 15781273  T
Q  152 ttt-gatcggattcacaaca 170  Q
    |||  |||| ||||||||||    
T  15781274 tttccatcgaattcacaaca 15781293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 28181300 - 28181417
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| |||||||   || ||||||||||| ||||||||| |||||| | ||||||||||||||||||| |||||||||||||| |    
T  28181300 ttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgattgt-ccttgctccacacatcaagtttgttattggtgtgat 28181397  T
Q  151 ttttgatcggattcacaaca 170  Q
    ||||| ||| ||||||||||    
T  28181398 ttttgttcgaattcacaaca 28181417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 36012125 - 36012243
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||| |||||| ||||||| | |  ||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| |    
T  36012125 ttttctacttttcgcttgtgtttataattgttccatacactttgtttt-ggttgtttgattatcccttgctccatacatcaagtttgttattggtgtgat 36012223  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| |||| |||||    
T  36012224 ttttcatcgaattcgcaaca 36012243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 561737 - 561635
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||  ||||||||||||||  ||| ||||||||||||||| | ||||||||||| |||    
T  561737 ttttctacttttg-cttgtgtttataacttccatacactttgttt--ggttgcttgattattacttactccacacatcaagtattttattggtgtgattt 561641  T
Q  154 tgatcg 159  Q
    | ||||    
T  561640 tcatcg 561635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 27101140 - 27101045
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||||||| ||||||  |||||| | |  ||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||    
T  27101140 ttttctactttttgcttgtgattataattgttccatacactttgtttt-ggttgcctgattattcattgctccacacatcaagttgttattggtgtg 27101045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 28761402 - 28761287
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    ||||||||||||| |||||  |||||| || |||||||||| |||| ||||| ||||||||| |||||||||||||||||| || ||||||||||| |||    
T  28761402 ttttctacttttg-cttgtgattataatttccatacactttatttt-ggttgtttgattatcacttgctccacacatcaagattattattggtgtgattt 28761305  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||||||||||    
T  28761304 ttcatcgaattcacaaca 28761287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 51943669 - 51943752
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||||||||||||||| ||||||| | |  || |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  51943669 ttttctacttttggcttgtgtttataattgttccaaacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtt 51943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 6484654 - 6484773
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||||||| ||||| |||||||||||||||| || |||||||| ||||| |    
T  6484654 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacacatcaaatttgttattagtgtgat 6484753  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| || | ||||||||||    
T  6484754 tttttattgaattcacaaca 6484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 36957651 - 36957719
Alignment:
Q  102 ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || |||| |||| ||||| ||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaagttgttattgatatgattttcatcgaattcagaaca 36957719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 880414 - 880313
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||||||| ||||  |||||||| |  ||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||| |||||| |    
T  880414 ttttctacttttggtttgtgattataactgttccatacactttgtttt-ggttgcttgattaatccttgctccacacatcaagtttgttatgggtgtgat 880316  T
Q  152 ttt 154  Q
    |||    
T  880315 ttt 880313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 45883239 - 45883340
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||| ||||||||  |||||| | |  ||||||||||||||| |||||||| | ||||||||||||||||||||||| |||||||||||||| |    
T  45883239 ttttctacttctggcttgtgattataattgttccatacactttgtttt-ggttgcttaactatcccttgctccacacatcaagtttgttattggtgtgat 45883337  T
Q  152 ttt 154  Q
    |||    
T  45883338 ttt 45883340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 25688119 - 25688022
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||||||||||||||| |||| || | |  ||||||||||| |||||||||  |||||||| |||||||||||||| ||| ||||||||||||||    
T  25688119 ttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgctccacacataaagtttgttattggtgtg 25688022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 43421378 - 43421258
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaa-gttgttattggtgtg-t 150  Q
    |||| |||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| |||  |||||||||||||||||  |||||||||||||| |    
T  43421378 ttttatacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatatcttgctccacacatcaactttgttattggtgtgat 43421280  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| |||| |||||||    
T  43421279 ttttcatcgaattcgcaacaat 43421258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 12267937 - 12267842
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 148  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||| || ||||||||||||| || |||||||||||||    
T  12267937 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactattccctgctccacacatcaaatttgttattggtgt 12267842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 32263999 - 32263881
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||  |||||||| ||||||||||||||| || |||||||| ||||| |    
T  32263999 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtctgattatcacttgctccacacatcaaatttgttattagtgtgat 32263901  T
Q  151 ttttgatcggattcacaaca 170  Q
    ||||  ||| ||||||||||    
T  32263900 ttttcttcgaattcacaaca 32263881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 25635718 - 25635789
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    ||||||||||||||||  |||||||||||||||||||  ||||| ||||| |||| |||| |||||||||||    
T  25635718 ttggttgcttgattattacttgctccacacatcaagtatttattagtgtgattttcatcgaattcacaacaa 25635789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 880203 - 880107
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||||||||||| ||||  ||||||||  |||||||||||||||||   |||||||||||| |||| |||||||||||||| || |||||||||||    
T  880203 ttttctacttttggtttgtgattataactgtttcatacactttgttttct-ttgcttgattattccttactccacacatcaagtttattattggtgtg 880107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 25634224 - 25634297
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||  |||||||| ||||| ||||  ||||||||||| |||| |||| |||||||||||||    
T  25634224 ttggttgcttgattattacttgctccccacattaagtatttattggtgtgattttcatcgaattcacaacaatt 25634297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 51674682 - 51674626
Alignment:
Q  99 tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 154  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||    
T  51674682 tttggttgcttgattattccttgctccatacatcaagtttgttattggtgtgatttt 51674626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 53591523 - 53591579
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtttt 153  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||| ||||||||    
T  53591523 ttttggttgcttgattatcccttgttccacacatcaaatttgttattgatgtgtttt 53591579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 53468414 - 53468313
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||||||| || ||||  ||||| | ||||||||||||||||| |||||||||||||| |    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggctgctccattattcattgctccacacatcaagtttgttattggtgtggt 53468316  T
Q  152 ttt 154  Q
    |||    
T  53468315 ttt 53468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 17795554 - 17795669
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-ttt 152  Q
    |||||||||||||  ||||  ||||||||| |||||| ||| |||| |||||||||| ||||  |||||||||||||| || || ||||||||||| |||    
T  17795554 ttttctacttttgt-ttgtgattataacttccatacattttatttt-ggttgcttgactatcagttgctccacacatcaaatttattattggtgtgattt 17795651  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||||||||||    
T  17795652 ttcatcgaattcacaaca 17795669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 19103994 - 19104109
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-ttt 152  Q
    |||||||||||||  ||||  ||||||||| |||||| ||| |||| |||||||||| ||||  |||||||||||||| || || ||||||||||| |||    
T  19103994 ttttctacttttgt-ttgtgattataacttccatacattttatttt-ggttgcttgactatcagttgctccacacatcaaatttattattggtgtgattt 19104091  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||||||||||    
T  19104092 ttcatcgaattcacaaca 19104109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 53597575 - 53597647
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||   ||||||||||||| |||| | ||||||||||| |||| |||| |||||||||||||    
T  53597575 ttggttgcttgattatt--ttgctccacacataaagtattttattggtgtgattttcatcgaattcacaacaatt 53597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 35917937 - 35917900
Alignment:
Q  111 attatcccttgctccacacatcaagttgttattggtgt 148  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  35917937 attatcccttgttccatacatcaagttgttattggtgt 35917900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 36871222 - 36871147
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaacaat 172  Q
    |||||||||||||||||| | ||||||||||||||||||  |||| ||||||  ||||| | || ||||||||||||    
T  36871222 ttttggttgcttgattattc-ttgctccacacatcaagtatttatcggtgtgattttttcaacgaattcacaacaat 36871147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 5e-56; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 16226473 - 16226610
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16226473 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatcccttgctccacacatcaag 16226571  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||| ||||| |||| |||||||||||||    
T  16226572 ttgttattggtgtgatttttcatcgaattcacaacaatt 16226610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 13358835 - 13359012
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13358835 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacac 13358933  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  13358934 tttgattttggttgcttgactatcccttactccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaa 13359012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 9459410 - 9459277
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9459410 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 9459313  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  9459312 ttgttattggtgtgatttttcatcgaattcacaaca 9459277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 9463237 - 9463104
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9463237 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 9463140  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  9463139 ttgttattggtgtgatttttcatcgaattcacaaca 9463104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 16231868 - 16232002
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  16231868 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgattttggttgcttgattatccgttgctccacacatcaag 16231966  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  16231967 ttgttattggtgtgatttttcatcgaattcacaaca 16232002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 39932336 - 39932514
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||| ||||||||||||||  | ||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39932336 accgaattgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttccatacac 39932435  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  39932436 tttg-ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 39932514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 172 - 276
Target Start/End: Original strand, 47569400 - 47569504
Alignment:
Q  172 ttatcactctgttattggttgactatacgaagagggagcaagaagtgttgttatgaataacattgcacaaagggtggaaaagttgctacgtgctaaacat 271  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47569400 ttatcactctgttattggtagactatacgaagagggagcaagaagtgttgttatgaataacattgcacaaagggtggaaaagttgctacgtgctaaacat 47569499  T
Q  272 ttttt 276  Q
    |||||    
T  47569500 ttttt 47569504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 28842799 - 28842932
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28842799 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttactccacacatcaag 28842896  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| ||||| |||| |||| |||| ||||||    
T  28842897 ttgttattagtgtgattttcatcgaattcgcaacaa 28842932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 28840941 - 28841088
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28840941 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacac 28841039  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttat 142  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  28841040 tttg-ttttggttgcttgattatcccttgctccactcatcaagttgttat 28841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51750301 - 51750477
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  51750301 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 51750399  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  51750400 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttatcgaattcgcaacaa 51750477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 47177667 - 47177804
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  47177667 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag 47177765  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  47177766 ttgttattggtgtgatttttgatcgaattcacaacaatt 47177804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10399847 - 10399692
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  10399847 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 10399749  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10399748 tttgattttggttgcttgattatctcttgctccacacatcaagttgttattggtgtg 10399692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15294853 - 15294689
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  15294853 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 15294755  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcg 159  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  15294754 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcg 15294689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 13447292 - 13447117
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||| |||||||||||||||| ||||||||||||||||||||    || |||||||    
T  13447292 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgtttttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 13447194  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  13447193 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 13447117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 47180018 - 47180152
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||| ||||| |||||| |||||||||||||||||||||||||    
T  47180018 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag 47180116  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| |||||||||| ||||||||||    
T  47180117 ttgttattggtgtgatttttgatcgaattcacaaca 47180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20291718 - 20291897
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | | ||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  20291718 accgaactgggtcaacaaattcttttttgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 20291816  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
     ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  20291817 cttgattttggttacttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaatt 20291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 13762101 - 13762257
Alignment:
Q  4 gaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacacttt 95  Q
    ||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||    
T  13762101 gaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacacttt 13762199  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  13762200 gtttt-ggttgcttgattatccctttctccacacatcaagttgttattggtgtgatttt 13762257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 2617840 - 2617958
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||||||||||||    || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  2617840 ttttctacttttggcttgtatttaattgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaagttgttattggtgtggtttt 2617939  T
Q  155 gatcggattcacaacaatt 173  Q
     |||| |||| ||||||||    
T  2617940 catcgaattcgcaacaatt 2617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51757792 - 51757976
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgttttt----ctacttttggcttgtatttataactttcat 88  Q
    |||||||| ||||||||||||  | ||||||||||||      |||||||||||||||||||||||    |||||||||||||||||| |    || |||    
T  51757792 accgaactaggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttttccctacttttggcttgtattcaattgttccat 51757891  T
Q  89 acactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgt-gtttttgatcggattcacaacaatt 173  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||||||||    
T  51757892 acactttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtcatttttcatcgaattcacaacaatt 51757976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51752625 - 51752806
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgttttt-----ctacttttggcttgtatttataactttca 87  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||||     |||||||||||||||||| |    |||||    
T  51752625 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttttttcctacttttggcttgtattcaattgtttca 51752724  T
Q  88 tacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||| |||||||||||    
T  51752725 tacactttgtttt-ggttgcttgattatcccttgctccacacat-aagttattattggtgtgattttcatcgaattcacaacaa 51752806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 46431725 - 46431546
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||  | ||||||||||||       |||||||||||||||||||||| ||||||||||||||||||||    || |||||     
T  46431725 accgaactgggtcaacaaattcttttgtgttcttctcttcttttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacg 46431627  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||| |||||||    
T  46431626 ctttgtttt-ggttgcttgattatctcttgctccaaacatcaagttgttattggtgtgatttttcatcgaattcgcaacaat 46431546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 20302746 - 20302879
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||| ||| |||||||| |||||||||| ||||||||| ||||||||    
T  20302746 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacaccttgattttggttacttgattatctcttgctccagacatcaag 20302844  T
Q  136 ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||||||||| |||| |||| |||| |||||    
T  20302845 ttgttattggtgtgattttcatcgaattcgcaaca 20302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 23786101 - 23786278
Alignment:
Q  1 accgaactgggtcaacaaatttc--tgtgttcttctcgt------gttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||||  |||||||||||  |      |||||||||||||||||||| |||||||| ||||||||||||    || |||||     
T  23786101 accgaactgggtcaacaaatttccttgtgttcttcttcttcttttgttcttctcgccgttgtttt-ctactttttggcttgtatttaattgttccatacg 23786199  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  23786200 ctttgtttt-ggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 23786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 31735540 - 31735388
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||| ||||||||||||||||    || |||||||    
T  31735540 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-cta-ttttggcttgtatttaattgttccatacac 31735443  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 148  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  31735442 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgt 31735388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 28207087 - 28206909
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| ||||||||||||||| ||||||| | |  ||||||||||    
T  28207087 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacacttt 28206989  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt-tgatcggattcacaacaatt 173  Q
    | |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| | |||| |||||||||||||    
T  28206988 gattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaatt 28206909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 15916703 - 15916821
Alignment:
Q  52 tgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-t 150  Q
    |||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |  |||||||||||||||||||  |||||||||||      
T  15916703 tgtttttctacttttggcttgtgtttataacttccatacactttg-ttttggttgcttgattgttacttgctccacacatcaagtatttattggtgtgac 15916801  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  15916802 ttttcatcgaattcacaaca 15916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 16429277 - 16429390
Alignment:
Q  61 acttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatc 158  Q
    |||||||| |||| |||||||||| ||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||| |||    
T  16429277 acttttggtttgtgtttataacttccatacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatc 16429375  T
Q  159 ggattcacaacaatt 173  Q
    | |||||||||||||    
T  16429376 gaattcacaacaatt 16429390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 2949197 - 2949079
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  2949197 ttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 2949099  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  2949098 ttttcatcgaattcacaaca 2949079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 3579548 - 3579431
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  3579548 ttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgtt 3579450  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| ||||||||||    
T  3579449 tttcatcgaattcacaaca 3579431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 24325968 - 24326101
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||||||| ||||||||||| ||| |||| ||||||||||    || ||||||||||   |||||||||||||||||||||| ||||||||||||||    
T  24325968 gtgttcttctcaccgttgttttt-tacctttgacttgtatttaattgttccatacacttt-actttggttgcttgattatcccttactccacacatcaag 24326065  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||| ||||| |||| ||||||||||    
T  24326066 ttgttattggtgtgatttttcatcgaattcacaaca 24326101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 25251239 - 25251118
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||||||||  |||||| |  ||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| |    
T  25251239 ttttctacttttggcttgtgattataattgtttcatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgat 25251141  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||||||| ||||    
T  25251140 ttttcatcgaattcacaataatt 25251118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 9241052 - 9240937
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||| |||||||||||| |  ||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||| |    
T  9241052 ttttctacttttggtttgtatttataattgtttcatacactttgtttt-ggttgcttgattatcacttgctccacacttcaagtttgttattggtgtgat 9240954  T
Q  151 ttttgatcggattcaca 167  Q
    |||| |||| |||||||    
T  9240953 tttttatcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 47906532 - 47906704
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttct-tctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| ||| | || | |||||| |||||||| |||||||||||||||  |||||| | |  ||||||||||    
T  47906532 accgaactgggtcaacaaattcttttgtgttct-ctcttcttttctctcgctgttgtttt-ctacttttggcttgtgattataattgttccatacacttt 47906629  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    | ||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||| |||||    
T  47906630 ggttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaaca 47906704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 14097934 - 14097832
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  14097934 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgtt 14097835  T
Q  152 ttt 154  Q
    |||    
T  14097834 ttt 14097832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 14183569 - 14183452
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||| |||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||  |||||| |||||||||||| | ||||||||||| |||    
T  14183569 ttttcttcttttg-cttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgcttcacacatcaagtattttattggtgtgattt 14183472  T
Q  154 tgatcggattcacaacaatt 173  Q
    | |||| |||||||||||||    
T  14183471 ttatcgaattcacaacaatt 14183452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 23816206 - 23816323
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tt 151  Q
    ||||||||||||| |||||  |||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  23816206 ttttctacttttgacttgtgattataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagttgttattggtgtgatt 23816304  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| |||| |||||    
T  23816305 tttcatcgaattcgcaaca 23816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 27336903 - 27336801
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |    
T  27336903 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattgatgtgat 27336804  T
Q  152 ttt 154  Q
    |||    
T  27336803 ttt 27336801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 50078754 - 50078653
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  50078754 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgat 50078656  T
Q  152 ttt 154  Q
    |||    
T  50078655 ttt 50078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 39462781 - 39462956
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| ||| ||||||||||| ||||||| | |  ||||||||||    
T  39462781 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctaattttggcttgtgtttataattgttccatacacttt 39462879  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    | ||||| |||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  39462880 gattttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 39462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 41647236 - 41647357
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| |  ||||||||||||| |||||||||  |||||||| |||||||| ||||||||| ||||||||||||||||    
T  41647236 ttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctccgcacatcaagtttgttattggtgtgtt 41647335  T
Q  152 tt-tgatcggattcacaacaat 172  Q
    || | |||| ||||||||||||    
T  41647336 ttctcatcgaattcacaacaat 41647357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 50307508 - 50307387
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||||||||| |||||||| || ||||||||||| |    
T  50307508 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtttattattggtgtgat 50307409  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| |||| |||||||    
T  50307408 ttttcatcgaattcccaacaat 50307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 8349018 - 8348902
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    |||||||||||||  |||| |||||||||| ||||||||||||||  ||||||||||||||  |||| ||||||| ||||||| ||||||||||| ||||    
T  8349018 ttttctacttttgt-ttgtgtttataacttccatacactttgttt--ggttgcttgattattacttgttccacacgtcaagtttttattggtgtgatttt 8348922  T
Q  154 tgatcggattcacaacaatt 173  Q
    | |||| |||||||||||||    
T  8348921 tcatcgaattcacaacaatt 8348902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 17324390 - 17324484
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 147  Q
    ||||||||||||||||||| ||||||| |||  ||||||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17324390 ttttctacttttggcttgtgtttataattttttcatacactttgttat-ggttgcttgattattccttgctccacacatcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 31490228 - 31490346
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tt 151  Q
    ||||||||||||| ||||| ||||||| |  |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||  |||||||||| ||    
T  31490228 ttttctacttttgacttgtgtttataattgtttcatacactttatttt-ggttgcttgattatctcttgctccacacatcaagtttgtattggtgtgatt 31490326  T
Q  152 tttgatcggattcacaacaa 171  Q
    ||| |||| |||| ||||||    
T  31490327 tttcatcgaattcgcaacaa 31490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 12302470 - 12302368
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||| | |||||||| |||||||||||||||||| ||||||||||||||||    
T  12302470 ttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctccacacatcaagtttgttattggtgtgtt 12302371  T
Q  152 ttt 154  Q
    |||    
T  12302370 ttt 12302368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 27339094 - 27338992
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||||||||| |||| |    
T  27339094 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccacacatcaagtttgttattgatgtgat 27338995  T
Q  152 ttt 154  Q
    |||    
T  27338994 ttt 27338992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 2510318 - 2510202
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||||    || ||||||||||||||| | ||||||||||||| |||||| |||| ||||||    
T  2510318 gtgttcttctcgccgttgtttt-ctatttttgacttgtttttaattgttccatacactttgttttcg-ttgcttgattatctcttgcttcacatatcaag 2510221  T
Q  136 ttgttattggtgtgttttt 154  Q
    |||||||||||||| ||||    
T  2510220 ttgttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 13215400 - 13215500
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||| |||| ||||||||||||||||||||||| || |||||||||||||    
T  13215400 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttattattggtgtgtt 13215498  T
Q  152 tt 153  Q
    ||    
T  13215499 tt 13215500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 6995658 - 6995539
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||  | |  ||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||||| |    
T  6995658 ttttctacttttggcttgtgtttatagttgttccatacactttgtttt-gattgcttgactatcccttgctccacacatcaagtttgttattggtgtgat 6995560  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| |||| ||||||    
T  6995559 ttttcatcgaattcgcaacaa 6995539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 18800538 - 18800426
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||   |||||| ||||||||||| | || |||||||| |||    
T  18800538 ttttctacttttggcttgtgtttataacttccatacactttg-ttttgattgcttgattattatttgctctacacatcaagtattttgttggtgtgattt 18800440  T
Q  154 tgatcggattcaca 167  Q
    | |||| |||||||    
T  18800439 tcatcgaattcaca 18800426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 17319203 - 17319321
Alignment:
Q  55 ttttctacttttggcttgtatttataac--tttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||||  || ||||||||||| ||||||||| |||||||| |||| ||||||||||| || |||||||||||| | |    
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttg-ttttggttgtttgattattccttactccacacatcaaatttgttattggtgcgat 17319301  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  17319302 ttttcatcgaattcacaaca 17319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 40134260 - 40134378
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgat--tatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||   ||||||||| ||||||||||| |||||||||| ||||  |||| |||||||||||||||||| ||||||||| |||| |    
T  40134260 ttttctacttttggcttgagattataacttccatacactttg-ttttggttgcctgattatatcacttgctccacacatcaagtttgttattgatgtgat 40134358  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  40134359 ttttcatcgaattcacaaca 40134378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 6115067 - 6114989
Alignment:
Q  57 ttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||||| |||||||||||||||| |||||| ||| |||| ||||||||||||||| ||| |||||||||||||||    
T  6115067 ttctacttttgacttgtatttataacttccatacattttatttt-ggttgcttgattatcactttctccacacatcaagt 6114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 16432702 - 16432804
Alignment:
Q  52 tgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgt 150  Q
    ||||||||||||||||| || | ||||||||||||||||||| || ||||| |||| |||||||  ||||||||||||||| || ||||||||||||||     
T  16432702 tgtttttctacttttggtttatgtttataactttcatacactgtg-ttttgattgcctgattattacttgctccacacatcaaatttgttattggtgtga 16432800  T
Q  151 tttt 154  Q
    ||||    
T  16432801 tttt 16432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 38925448 - 38925346
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttg-tttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| ||||||||||| |||||||| ||| |||||||||||||| || ||||||||||||    
T  38925448 ttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactccacacatcaagtttattattggtgtgt 38925349  T
Q  151 ttt 153  Q
    |||    
T  38925348 ttt 38925346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 4131340 - 4131244
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||| ||||||||||| ||||||| | |  ||||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  4131340 ttttctatttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatctcttgctccgcacatcaagtttgttattggtgtg 4131244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 28998215 - 28998091
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgttt--ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| ||  |||||||| |||||||| |||||||||||||||||| |||| |||||||||    
T  28998215 ttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtg 28998116  T
Q  150 tttt-tgatcggattcacaacaatt 173  Q
    |||| |  ||| |||||||||||||    
T  28998115 ttttctcttcgaattcacaacaatt 28998091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 29003931 - 29003807
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgttt--ttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| ||  |||||||| |||||||| |||||||||||||||||| |||| |||||||||    
T  29003931 ttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtg 29003832  T
Q  150 tttt-tgatcggattcacaacaatt 173  Q
    |||| |  ||| |||||||||||||    
T  29003831 ttttctcttcgaattcacaacaatt 29003807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 30790350 - 30790250
Alignment:
Q  70 ttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaa 168  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||  |||||| ||||||||| || | ||||||||||| |||| |||| ||||||||    
T  30790350 ttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgcttcacacatcaggtattttattggtgtgattttcatcgaattcacaa 30790252  T
Q  169 ca 170  Q
    ||    
T  30790251 ca 30790250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 16428968 - 16429043
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacat 131  Q
    |||||||||||||| |||| ||||||||||  |||||||||| |||||||||| |||||||| ||||||||||||||    
T  16428968 ttttctacttttggtttgtgtttataacttctatacactttg-ttttggttgcctgattatcacttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 25248516 - 25248398
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||| ||| | ||||||| |  ||||||||||||||||| |||||||||| ||| |||| |||||||||||||| ||||||||| |||| |    
T  25248516 ttttctacttttgacttttgtttataattgtttcatacactttgtttt-ggttgcttgactattccttactccacacatcaagtttgttattgttgtgat 25248418  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  25248417 ttttcatcgaattcacaaca 25248398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 47451948 - 47452066
Alignment:
Q  56 tttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-tt 151  Q
    |||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| |||||||||||| ||||||| || ||||||||| |||| ||    
T  47451948 tttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctcgacacatcaaatttgttattgatgtgatt 47452046  T
Q  152 tttgatcggattcacaacaa 171  Q
    ||| || | |||||||||||    
T  47452047 tttcattgaattcacaacaa 47452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 50248535 - 50248417
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||| |||||||||||||  |||||| | |  ||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||| |    
T  50248535 ttttcaacttttggcttgtggttataattgttccatacactttgtttt-ggttgcttgattatcccttactccacacatcaaatttgttattggtgtgat 50248437  T
Q  151 ttttgatcggattcacaaca 170  Q
    || | |||| ||||||||||    
T  50248436 ttatcatcgaattcacaaca 50248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 15823865 - 15823967
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| |||||  |||||| | |  ||||||||||| |||||||||| |||||| ||||| |||||||||||||| |||||||||||||| |    
T  15823865 ttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtttgttattggtgtgat 15823964  T
Q  152 ttt 154  Q
    |||    
T  15823965 ttt 15823967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 17186094 - 17185977
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    |||||||||||||  ||||  ||||||||| ||||||||||||||| |||||||||| |||| ||||||||||| |||||| || ||||||||||| |||    
T  17186094 ttttctacttttgt-ttgtgattataacttccatacactttgtttt-ggttgcttgactatcacttgctccacatatcaagtttattattggtgtgattt 17185997  T
Q  153 ttgatcggattcacaacaat 172  Q
    || |||  ||||||||||||    
T  17185996 ttcatcaaattcacaacaat 17185977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 18839904 - 18840023
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||| ||||||||||| ||||||| | |  ||||||||||||||  | || ||||||||| ||||||||||||||||||| |||||||||||||| |    
T  18839904 ttttctagttttggcttgtgtttataattgttccatacactttgtttc-gattacttgattattccttgctccacacatcaagtttgttattggtgtgat 18840002  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| |||| ||||||    
T  18840003 ttttcatcgaattcgcaacaa 18840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 11457440 - 11457339
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| |||| || | |  |||| |||||||||| |||||| |||||||| |||||| ||||||||||| |||||||||||||| |    
T  11457440 ttttctacttttggcttgtgtttaaaattgttccatatactttgtttt-ggttgcctgattatcacttgcttcacacatcaagtttgttattggtgtgat 11457342  T
Q  152 ttt 154  Q
    |||    
T  11457341 ttt 11457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 30780362 - 30780482
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctc--cacacatcaag-ttgttattggtgtg 149  Q
    |||||||||||||  |||| ||||||| |  ||||||||||||||||| |||||||||||||| |||| |||  ||||||||||| ||||||||||||||    
T  30780362 ttttctacttttgatttgtgtttataattgtttcatacactttgtttt-ggttgcttgattattccttactccacacacatcaagtttgttattggtgtg 30780460  T
Q  150 -tttttgatcggattcacaaca 170  Q
      |||| |||| ||||||||||    
T  30780461 agttttcatcgaattcacaaca 30780482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 31424980 - 31424879
Alignment:
Q  55 ttttctacttttggcttgtatttataactttc--atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | ||  ||||| |||||| | |||||||||| ||| ||||||||||||||||||| |||||||||||||| |    
T  31424980 ttttctacttttgacttgtgtttataattgtcccatacattttgttat-ggttgcttgagtattccttgctccacacatcaagtttgttattggtgtgat 31424882  T
Q  152 ttt 154  Q
    |||    
T  31424881 ttt 31424879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 18307425 - 18307525
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||| | ||||||  ||||||||||||||||| ||||||||| ||| ||    
T  18307425 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcctaattatcatttgctccacacatcaagtttgttattgatgtatt 18307523  T
Q  152 tt 153  Q
    ||    
T  18307524 tt 18307525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 25128225 - 25128272
Alignment:
Q  90 cactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||||    
T  25128225 cactttgattttggttgcttgattattccttgctctacacatcaagtt 25128272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 25860367 - 25860270
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |     |||| ||||||||||||||||||||||| ||| |||||||||| |    
T  25860367 ttttctacttttggcttgtgtttataattgttccatacactttgttttgg-----ttgactatcccttgctccacacatcaagtttgatattggtgtggt 25860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 8347239 - 8347161
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||||||| ||| | ||||||||||||||| |||||||||  ||||||||||||||  ||| |||||| ||||||||    
T  8347239 ttttctacttttg-cttatgtttataactttcatatactttgttt--ggttgcttgattattacttactccacgcatcaagt 8347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 26519381 - 26519293
Alignment:
Q  75 tttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcac 166  Q
    |||||||||| ||||||||||||||  ||||||||||||||  |||||||||||||  |||| | ||||||||||| |||| |||| ||||||    
T  26519381 tttataacttccatacactttgttt--ggttgcttgattattacttgctccacaca--aagtattttattggtgtgattttcatcgaattcac 26519293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 170
Target Start/End: Complemental strand, 31422780 - 31422706
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||| |||| |||||||| ||||||||||||||||||| ||||||||| |||| ||||| |||| |||| |||||    
T  31422780 ttttagttgattgattattccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcgcaaca 31422706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 3091012 - 3090955
Alignment:
Q  119 ttgctccacacatcaagttgttattggtgtgtttttg-atcggattcacaacaattat 175  Q
    ||||||||||||| || || ||||||||||||||||| | || |||||||||||||||    
T  3091012 ttgctccacacatgaaatttttattggtgtgtttttgcaacgaattcacaacaattat 3090955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 17324546 - 17324501
Alignment:
Q  105 tgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||    
T  17324546 tgcttgactatcccttactccacacatcaagtttgttattggtgtg 17324501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 43082291 - 43082467
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--------tcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||||| |||        ||||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  43082291 accgaactgggtcaacaaatttctttgtgttcttcttcttcttttgttcttctcgacgttgtttt-ctacttttggcttgtatttataactttcatacac 43082389  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  43082390 tttgtttt-ggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaaca 43082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 24873174 - 24873039
Alignment:
Q  36 gtgttcttctcgccgttgtttttctac-ttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24873174 gtgttcttctcgccgttgtttt-ctaccttttggcttgtatttataactttcatacactttgtttttggttgcttaattatcccttgctccacacatcaa 24873076  T
Q  135 gttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||| ||||| |||| ||||||||||    
T  24873075 gttgttattggtgtgatttttcatcgaattcacaaca 24873039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 43079953 - 43080099
Alignment:
Q  26 tgttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||||  ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  43079953 tgttcttcttttgttcttctcgccgttgtttt-ctacttttgacttgtatttataactttcatacactttgtttt-ggttgcttaattatccattgctcc 43080050  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43080051 acacatcaagttgttattggtgtgatttttgatcagattcacaacaatt 43080099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 4424336 - 4424514
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  4424336 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 4424434  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||    
T  4424435 tttgtttttggttgcttgattatcccttgctccacacaccaagttgttattggtgtgattttcatcgaattcacaacaat 4424514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 28283238 - 28283060
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||   ||||||||||    
T  28283238 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttatttttttcatacac 28283140  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||    
T  28283139 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaat 28283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 44721161 - 44721337
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||||||||||||  |||||||||||      |||||||||||||||||||||| ||||||||| ||||||||||    || |||||||    
T  44721161 accgaactgggtcaacaaatttctttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttgacttgtatttaattattccatacac 44721259  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||| |||||||||||    
T  44721260 tttgtttt-ggttgcttgattatcccttactccacacatcaagttgttattggtgtgattattgatcagattcacaaca 44721337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15809536 - 15809711
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||| ||||| ||||||||||    ||||||||||    
T  15809536 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctatttttgccttgtatttaattgtttcatacac 15809634  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  15809635 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 15809711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18811025 - 18811205
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||| || ||||| ||||||||||||||||||||    || |||||||    
T  18811025 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgctgtcgtttt-ctacttttggcttgtatttaattgttccatacac 18811123  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  18811124 tttgattttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaatt 18811205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22684670 - 22684510
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||| ||    
T  22684670 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccataaac 22684572  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  22684571 tttgattttggttgcctgattatcccttgctccacacatcaagttgttattggtgtgatttt 22684510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 609052 - 609230
Alignment:
Q  1 accgaactgggtcaacaaatt---tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||   | ||||||||||||      |||||||||| ||||||||||| ||||||||||||||||||||    |||||||||    
T  609052 accgaactgggtcaacaaattctttttgtgttcttctcttctttgtgttcttcttgccgttgtttt-ctacttttggcttgtatttaattgtttcataca 609150  T
Q  92 ctttgtttt-tggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| | |||| |||| ||||||||||    
T  609151 ctttgttttttggttgcttgattatctcttgctccacgcatcaagttgttattggtgcgattttcatcgaattcacaaca 609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 32339627 - 32339804
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||| ||||||||  | ||||||||||||      ||||||||||||||||| |||| ||||||||| ||||||||||    || |||||||    
T  32339627 accgaactgggttaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttatttt-ctacttttgacttgtatttaattgttccatacac 32339725  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  32339726 tttgattttggttgcttgattatcccttgccccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaa 32339804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 27827303 - 27827482
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||| ||||||||||    || |||||||    
T  27827303 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttgacttgtatttaattgttccatacac 27827401  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||| |||| ||||||||    
T  27827402 tttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcgcaacaatt 27827482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 3874354 - 3874488
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  3874354 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttggttatctcttgctccacacatcaag 3874451  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||| ||||| | || |||||||||||    
T  3874452 ttgttattggtgtgatttttcaacgaattcacaacaa 3874488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 3883569 - 3883436
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3883569 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatcctttgctccacacatcaag 3883472  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||| |||| ||||| |||| |||| |||||    
T  3883471 ttgttattgatgtgatttttcatcgaattcgcaaca 3883436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 43530433 - 43530592
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||| ||| ||||||| ||||||||||||||||||||    || |||||||    
T  43530433 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttcttgccattgtttt-ctacttttggcttgtatttaattgttccatacac 43530531  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  43530532 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttt 43530592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 18813199 - 18813376
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||| ||||||||||||  | ||||||||||||      |||||||||||||||| ||||| ||||||||||||||||||||    || |||||||    
T  18813199 accgaactaggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgtcgtttt-ctacttttggcttgtatttaattgttccatacac 18813297  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||||| |||| |||| |||||    
T  18813298 tttgattttggttgcttgattatctcttgctctacatatcaagttgttattggtgtgatttttcatcgaattcgcaaca 18813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 27829614 - 27829790
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||| ||| ||||||    || |||||||    
T  27829614 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttgacttatatttaattgttccatacac 27829712  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||| |||| |||||    
T  27829713 tttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcgcaaca 27829790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 13858450 - 13858334
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||||||| |||    
T  13858450 ttttctacttttggcttgtgtttataacttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttcttattggtgtgattt 13858352  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||| ||||||    
T  13858351 ttcatcgaatttacaaca 13858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 14808133 - 14808234
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |    
T  14808133 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgat 14808231  T
Q  152 ttt 154  Q
    |||    
T  14808232 ttt 14808234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 35872419 - 35872300
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| |||  |||||||||| |||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  35872419 ttttctacttttggcttgtgtttataatttttccatacactttatttt-ggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgtt 35872321  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    || | |||| |||||||||||    
T  35872320 ttctcatcgaattcacaacaa 35872300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 31162584 - 31162683
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||  ||||||||||||||||||| | ||||||||||| |||    
T  31162584 ttttctacttttggcttgtatttataacttccatacactttg-ttttggttacttaattattacttgctccacacatcaagtattttattggtgtgattt 31162682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 27106862 - 27106765
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    ||||||||||||| || ||  ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27106862 ttttctacttttgtct-gtgattataacttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgtttt 27106765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 28251584 - 28251410
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| |||||| ||||||||  |||||| | |  ||||||||||    
T  28251584 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctacttgtggcttgtgattataattgttccatacacttt 28251486  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaaca 170  Q
    ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||    
T  28251485 gtttt-ggttgcctgattattccttgctccacacatcaagttgttattggtgtgattttttcatcgaattcacaaca 28251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 33541372 - 33541255
Alignment:
Q  56 tttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tt 151  Q
    |||||||||||||||||| ||||||| | |  |||||||||| |||| | ||||||||||||||||| |||||||||||||| |||||||||||||| ||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacactttatttt-gattgcttgattatcccttactccacacatcaagtttgttattggtgtgatt 33541274  T
Q  152 tttgatcggattcacaaca 170  Q
    |||||||| ||||||||||    
T  33541273 tttgatcgaattcacaaca 33541255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15073029 - 15073202
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttct-tctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| ||| | || | |||||| |||||||| ||||||||||||||| ||||||| | |  ||||||||||    
T  15073029 accgaactgggtcaacaaattattttgtgttct-ctcttcttttctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacacttt 15073126  T
Q  96 gtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||| | |||||||| ||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  15073127 gtttt-gattgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 15073202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 15956348 - 15956445
Alignment:
Q  76 ttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||| ||||| |||| ||||||||||||    
T  15956348 ttataactttcatacactttgtttt-ggttgtttgactatcccttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaat 15956445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 25952892 - 25953011
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||||||| |||| ||||||| |  |||||||||||| |||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  25952892 ttttctacttttggattgtgtttataattgcttcatacactttatttt-ggttgcttgattatcactttctccacacatcaagtttgttattggtgtgtt 25952990  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    || | |||| |||||||||||    
T  25952991 ttctcatcgaattcacaacaa 25953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 2468094 - 2467976
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    ||||||| |||||  ||||  ||||||||| | ||||||||||||| |||||||||| |||| |||||||||||||||||| || ||||||||||| |||    
T  2468094 ttttctaattttgttttgtgattataacttccctacactttgtttt-ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattt 2467996  T
Q  154 tgatcggattcacaacaatt 173  Q
    | |||| |||||||||||||    
T  2467995 tcatcgaattcacaacaatt 2467976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 3005586 - 3005486
Alignment:
Q  69 cttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcaca 167  Q
    |||||||||||||||| |||||||||||  |||||||| ||||||||  ||||||||||||||||||| | ||||||||||| |||| |||| |||||||    
T  3005586 cttgtatttataacttccatacactttg--tttggttgtttgattattacttgctccacacatcaagtattttattggtgtgattttcatcgaattcaca 3005489  T
Q  168 aca 170  Q
    |||    
T  3005488 aca 3005486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 30480466 - 30480371
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 148  Q
    ||||||||||||||||||||||||||| | |  ||||||||||||||| |||||||||||||| |||| ||||||||||| || |||||||||||||    
T  30480466 ttttctacttttggcttgtatttataattgttccatacactttgtttt-ggttgcttgattattccttactccacacatcaaatttgttattggtgt 30480371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 14419153 - 14419032
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| |||||||   || ||||||||||| |||||||| | |||||||| ||||||||| |||||||| ||||||||||||||||    
T  14419153 ttttctacttttgacttgtgtttataattgttccatacactttg-ttttggtttcctgattatcacttgctccatacatcaagtttgttattggtgtgtt 14419055  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||||||||||||    
T  14419054 ttctcatcgaattcacaacaatt 14419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 15068354 - 15068475
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||| ||| | |  ||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||||| |||||||| |    
T  15068354 ttttctacttttggcttgtgtttgtaattgttccatacactttgtttt-ggttgcttgactatcccttgttccacacatcaagtttgttgttggtgtgat 15068452  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||| ||||||||    
T  15068453 ttttcatcgaattcgcaacaatt 15068475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 36865911 - 36866012
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||| | ||||||| | |  ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| |||| |    
T  36865911 ttttctacttttggcttttgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtttgttattgatgtggt 36866009  T
Q  152 ttt 154  Q
    |||    
T  36866010 ttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 14477652 - 14477741
Alignment:
Q  83 tttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||||||| |||||  |||||||| |||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||    
T  14477652 tttcatacactttgtttt-ggttgtctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaa 14477741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 21482681 - 21482798
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttt-tggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tt 151  Q
    |||||||||||||  ||||  ||||||||| |||||||||| |||| ||||||||| |||||| |||||||||||||||||| || ||||||||||| ||    
T  21482681 ttttctacttttgt-ttgtgattataacttccatacactttattttttggttgcttcattatcacttgctccacacatcaagtttattattggtgtgatt 21482779  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| ||||||||||    
T  21482780 tttcatcgaattcacaaca 21482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 37214227 - 37214127
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | ||| |||||||||||||| ||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||    
T  37214227 ttttctacttttggcttgtgtttataattgttctatacactttgtttt-ggttgcttgcttatctcttactccatacatcaagtttgttattggtgtgtt 37214129  T
Q  152 tt 153  Q
    ||    
T  37214128 tt 37214127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 170
Target Start/End: Complemental strand, 15185659 - 15185564
Alignment:
Q  76 ttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||| |||| ||||| | || ||||||||||    
T  15185659 ttataacttccatacactttgtttt-ggttgcttgactatcccttactccacacatcaagtttgttattgatgtgatttttcaccgaattcacaaca 15185564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 41383036 - 41383137
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||| |||||||| ||||||| | |  |||| |||||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||| |    
T  41383036 ttttctacttctggcttgtgtttataattgttccataaactttgtttt-gattgcttgattatctcttgctccacacatcaagtttgttattggtgtggt 41383134  T
Q  152 ttt 154  Q
    |||    
T  41383135 ttt 41383137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 21480893 - 21480993
Alignment:
Q  76 ttataactttcatacactttgttttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtg-tgtttttgatcggattcacaacaat 172  Q
    ||||||||| |||||||||||||||| ||||| |||||| || ||| |||||||||||||| || ||||||||| | ||||| |||| ||||||||||||    
T  21480893 ttataacttccatacactttgttttttggttgtttgattgtcacttactccacacatcaagtttattattggtgttatttttcatcgaattcacaacaat 21480992  T
Q  173 t 173  Q
    |    
T  21480993 t 21480993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 5372145 - 5372043
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||  ||||||||| |  |||||| |||  |||| ||||||||| ||||| ||||||||||||||||| ||||||||| |||| |    
T  5372145 ttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgtgat 5372046  T
Q  152 ttt 154  Q
    |||    
T  5372045 ttt 5372043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 183246 - 183310
Alignment:
Q  108 ttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt-tgatcggattcacaaca 170  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| | |||| ||||||||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaaca 183310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 41385118 - 41385192
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||| |||||||||||||| ||||||| | |  ||||||||||  ||||||||| ||||||||||||||||||||    
T  41385118 ttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatcccttgctccac 41385192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 1225571 - 1225619
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaagt-tgttattgg 145  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  1225571 ttttggttgcttgattattccttgttccacacatcaagtatgttattgg 1225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 181849 - 181896
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttt 100  Q
    ||||||||||||||||||| |||||||   ||||||||||||||||||    
T  181849 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt 181896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 9174163 - 9173986
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||||||||||||  |||||||||||      |||||||||||||||||||||||||||||||||||||||||||    ||||||||||    
T  9174163 accgaactgggtcaacaaatttctttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattatttcatacac 9174064  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||| ||||||    
T  9174063 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattagtgtgattttcatcgaattcgcaacaa 9173986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22132409 - 22132226
Alignment:
Q  1 accgaactgggtcaacaaatttctgtg---ttcttctc------gtgttcttctcgccgttgtttttct-acttttggcttgtatttataactttcatac 90  Q
    |||||||||||||||||||||||| ||   ||||||||      ||||||||||||||||||||||||| ||||||||||||||||||    || |||||    
T  22132409 accgaactgggtcaacaaatttctttggtcttcttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccatac 22132310  T
Q  91 actttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  22132309 actttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattattgatcagattcacaacaatt 22132226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 22782711 - 22782594
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  22782711 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgctttgtttttggttgcttaattatcccttgctccacacatcaag 22782613  T
Q  136 ttgttattggtgtgttttt 154  Q
    |||||||||||||| ||||    
T  22782612 ttgttattggtgtgatttt 22782594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 175
Target Start/End: Complemental strand, 11006228 - 11006089
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||||||||||||||||||||||||||| |||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11006228 gtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 11006130  T
Q  136 ttgttattggtgtgttttt-gatcggattcacaacaattat 175  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  11006129 ttgttattggtgtgtttttcgatcgaattcacaacaattat 11006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11008585 - 11008405
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||| ||||||||||||  | ||||||||||||      ||||||||||||||||||||||||||||||| |||||||||||    || |||||||    
T  11008585 accgaactaggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctactttttgcttgtatttaattgttccatacac 11008486  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt-gatcggattcacaacaatt 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  11008485 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttcgatcgaattcacaacaatt 11008405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26085994 - 26085818
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||| |||||||||||  | ||||||||||||      ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26085994 accgaactgtgtcaacaaattcttttgtgttcttctcttctttgtgtttttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacac 26085896  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||| |||| |||||    
T  26085895 tttgattttggttgcttgactatcccttgctccacacatcaagttgttattggtgtgattctcatcgaattcgcaaca 26085818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8631436 - 8631258
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    || |||||||    
T  8631436 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacac 8631337  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||||    
T  8631336 tttgttttag-ttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaat 8631258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 18709181 - 18709021
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||||||||||||||  ||||||||||        |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  18709181 accgaactgggtcaacaaatttctttgtgttcttcttcttctttgtgttcttctcgccgttgtttt-ctactattggcttgtatttataactttcataca 18709083  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  18709082 ctttgtttt-ggttgcttgattatgccttgctccacacatcaagttgttattggtgtggtttt 18709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 22780346 - 22780211
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  22780346 gtgttcttctcgccgttgtttt-ctacttttggcttatatttataactttgatacgctttgtttttggttgcttaattatcccttgctccacacatcaag 22780248  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||| ||||| |||| |||| ||||||    
T  22780247 ttgttattggtgtgatttttcatcgaattcgcaacaa 22780211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 31849616 - 31849440
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||||||||||||||||||||||||    || |||||||    
T  31849616 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacac 31849517  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  31849516 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 31849440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 9176448 - 9176312
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9176448 gtgttcttctcgccgttgtttttctacttttggcttgtatttaattattccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 9176350  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||||||||| ||||  ||| |||| ||||||||    
T  9176349 ttgttattggtgtgattttcgtcgaattcgcaacaatt 9176312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22134635 - 22134454
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--tcttctc------gtgttcttctcgccgttgtttttct-acttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||||| |||  |||||||      ||||||||||||||||||||||||| ||||||||||||||||||    || ||||||    
T  22134635 accgaactgggtcaacaaatttctttgtcttcttctcttctttgtgttcttctcgccgttgtttttcttacttttggcttgtatttaattgttccataca 22134536  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  22134535 ctttgtttt-ggttgtttgattatcccttgctccacacatcaagttgttattggtgtgattattgatcagattcacaacaatt 22134454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 51015561 - 51015720
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  51015561 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 51015659  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51015660 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 51015720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 5198762 - 5198895
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  5198762 gtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatccattgctccacacatcaag 5198860  T
Q  136 ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    || ||||||||||| |||| |||| ||||||||||    
T  5198861 ttattattggtgtgattttcatcgaattcacaaca 5198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11437678 - 11437856
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  11437678 accgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 11437776  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||    
T  11437777 tttgtttttggctgcttgattatctcttgctccatacatcaagttgttattggtgtgatttttcatcgaattcacaacaa 11437856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2484890 - 2484715
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||| |||||||||| ||  |||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  2484890 accgaactggatcaacaaattcctttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 2484792  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||    
T  2484791 tttatttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaaca 2484715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 5635493 - 5635318
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  5635493 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 5635395  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  5635394 tttgtttt-ggttgattgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 5635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 11435270 - 11435430
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||| ||||||| ||||||||||||||||||||    || |||||||    
T  11435270 accgaactgggtcaacaaattcttttgtgttcttctcttccttgtgttcttctcgccattgtttt-ctacttttggcttgtatttaattgttccatacac 11435368  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  11435369 tttgtttttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttt 11435430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22044408 - 22044255
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgt------gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | |||||||||||| |      |||||||||||||||||||| ||||||||||||||||||||    ||||||||||    
T  22044408 accgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgtttcatacac 22044310  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgt 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22044309 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgt 22044255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 16931806 - 16931629
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctcgt-----gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacact 93  Q
    ||||||||||||||||||||||||  ||||||||||| |     |||||||||||||||||||| ||||||||||||||||||||    || ||||| ||    
T  16931806 accgaactgggtcaacaaatttctttgtgttcttctcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgct 16931708  T
Q  94 ttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||    
T  16931707 ttgtttt-ggttgcttaattatcccttgctccacacattaagttgttattggtgtgatttttcatcgaattcacaacaat 16931629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18847468 - 18847645
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||  | |||||||||||       |||||||||||||||||||||| |||||||| ||||||||||||    || ||||||    
T  18847468 accgaactgggtcaacaaattcttttgtgttcttctgttctttgtgttcttctcgccgttgtttt-ctactttttggcttgtatttaattattccataca 18847566  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18847567 ctttgttt--ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaa 18847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 24348560 - 24348693
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24348560 gtgttcttctcgccgttgtttt-ctatttttggcttgtatttagttgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 24348657  T
Q  136 ttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||||||||| |||| |||| |||| ||||||    
T  24348658 ttgttattggtgtgattttcatcgaattcgcaacaa 24348693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 14789445 - 14789270
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgttcttctcgtgttcttctcgc-cgttgtttttctacttttggcttgtatttataa--ctttcatacactttgt 97  Q
    |||||||||||||||||||||  |||||||||||| | || ||||| |  |||| ||||||||||||||||||| |||||||   ||||||||||||||     
T  14789445 accgaactgggtcaacaaattcttgtgttcttctcttctttttctctctagttg-ttttctacttttggcttgtgtttataattgtttcatacactttg- 14789348  T
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||||    
T  14789347 ttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaatt 14789270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 6765160 - 6765335
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||    
T  6765160 accgaactgggtcaacaaattcttttgtgttcttctcttcttggtgttcttctcgccgttgtttt-ctacttt-ggcttgtatttataa-ttccatacac 6765256  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  6765257 tttgtttt-ggttgcttgattatcccttactccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 6765335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22046703 - 22046523
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgt------gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | |||||||||||| |      |||||||||| ||||||||| ||||||||| ||||||||||    || |||||||    
T  22046703 accgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgtcgttgtttt-ctacttttgacttgtatttaattgttccatacac 22046605  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaacaatt 173  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| |||||||||||||    
T  22046604 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcgatcgaattcacaacaatt 22046523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 53405492 - 53405629
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  53405492 gtgttcttttcgccgatgtttt-ctacttttggcttgtatttataacttccatacattttgtttt-ggttgcttgattatcccttgctccacacatcaag 53405589  T
Q  136 -ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
     || ||||||||||| ||||| |||| |||| ||||||||    
T  53405590 tttattattggtgtgatttttcatcgaattcgcaacaatt 53405629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 38409564 - 38409696
Alignment:
Q  37 tgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||||||||||||||| ||||||||||||||||||||    || |||||| |||||||| | |||||||||||||||||||||||||||||||||    
T  38409564 tgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacaatttgttttag-ttgcttgattatcccttgctccacacatcaagt 38409661  T
Q  137 tgttattggtgtgttttt-gatcggattcacaaca 170  Q
    |||||||||||||||||| ||| | ||||||||||    
T  38409662 tgttattggtgtgtttttcgattgaattcacaaca 38409696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 37089389 - 37089212
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  37089389 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 37089291  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  37089290 tttgtttt-ggttgcttgattatccattgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 37089212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 47868760 - 47868895
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||||||| |||||||||| |||||||||||||||||||     || ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  47868760 gtgttcttctcaccgttgtttt-ctacttttggcttgtattttattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaag 47868858  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||| ||||| |||| |||| ||||||    
T  47868859 ttgttattggtgtgatttttcatcgaattcgcaacaa 47868895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 170
Target Start/End: Complemental strand, 14787442 - 14787274
Alignment:
Q  5 aactgggtcaacaaatttctgtgttcttctcgtgttcttctcgc-cgttgtttttctacttttggcttgtatttataa--ctttcatacactttgttttt 101  Q
    |||||||||||||||||  |||||||||||| | || ||||| |  |||| ||||||||||||||||||| |||||||   |||||||||||||| ||||    
T  14787442 aactgggtcaacaaattcttgtgttcttctcttctttttctctctagttg-ttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 14787345  T
Q  102 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  14787344 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 14787274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 14633634 - 14633788
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || ||||||     
T  14633634 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacat 14633732  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14633733 tttgtttc-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtg 14633788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 153
Target Start/End: Original strand, 9148594 - 9148709
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| |||| |||||||||||||    
T  9148594 gtgttcttctcaccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctcttgttccacacatcaag 9148691  T
Q  136 ttgttattggtgtgtttt 153  Q
    ||||||||||||||||||    
T  9148692 ttgttattggtgtgtttt 9148709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 56 - 173
Target Start/End: Complemental strand, 22802694 - 22802574
Alignment:
Q  56 tttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tt 151  Q
    |||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  22802694 tttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 22802596  T
Q  152 tttgatcggattcacaacaatt 173  Q
    ||| |||| |||||||||||||    
T  22802595 tttcatcgaattcacaacaatt 22802574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7941639 - 7941814
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||| ||      |||||||||||||| ||||||| ||||||||| |||||||||     || |||||||    
T  7941639 accgaactgggtcaacaaattcttttgtgttcttttcttctttgtgttcttctcgccattgtttt-ctacttttgccttgtatttcattgttccatacac 7941737  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||| |||| |||||    
T  7941738 tttgtttt-ggttgcttaattatcccttgctccacacatcaagttgttgttggtgtgattttcatcgaattcgcaaca 7941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 16453678 - 16453799
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||||||||  ||||||||  ||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||| |    
T  16453678 ttttctacttttggcttgtgattataactgtttcatacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgat 16453776  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||||||||||||    
T  16453777 ttttcatcgaattcacaacaatt 16453799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 16934160 - 16933985
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctcgt-----gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacact 93  Q
    ||||||||||||||||||||||||  ||||||||||| |     |||||||||||||||||||| ||||||||||||||||||||    || ||||| ||    
T  16934160 accgaactgggtcaacaaatttctttgtgttcttctcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgct 16934062  T
Q  94 ttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |   |||||||||||| |||  |||||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||    
T  16934061 tg--ttttggttgcttaatt--cccttgctccacacattaagttgttattggtgtgatttttcatcgaattcacaacaatt 16933985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 38928142 - 38928024
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||||||||  |||||||| |  ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  38928142 ttttctacttttggcttgtgattataactgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgat 38928044  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| |||| |||||    
T  38928043 ttttcatcgaattcgcaaca 38928024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 40637390 - 40637543
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | |||||||| |||  | ||  |||||| |||||||| |||||||||||||||  |||||| | |  ||||||||||    
T  40637390 accgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgtttt-ctacttttggcttgtgattataattgttccatacacttt 40637488  T
Q  96 gtttt-tggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40637489 gttttttggttgcttgattattccttgctccacacatcaagttgttattggtgtg 40637543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 44599820 - 44599679
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| ||||||||| ||||||||||    || ||||| ||||||||| |||||||| ||||||| |||||||||    
T  44599820 ttcttcttttgttcttctcgccgttgtttt-ctacttttgccttgtatttaattattccatacgctttgtttt-ggttgcttaattatcc-ttgctccac 44599724  T
Q  128 acatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||||||||||| ||||| |||| |||| ||||||    
T  44599723 acatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 44599679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 17662262 - 17662108
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacactttg 96  Q
    |||||||||||||||||||||  | |||||||| ||| | || ||||||| |||||||| ||||||||||| |||  |||||| | |  |||||||||||    
T  17662262 accgaactgggtcaacaaattcttttgtgttct-ctcttctttttctcgctgttgtttt-ctacttttggcatgtgattataattgttccatacactttg 17662165  T
Q  97 tttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
     ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17662164 gttt-gattgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 17662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 36921456 - 36921335
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| |  |||||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |    
T  36921456 ttttctacttttggcttgtgtttataattgtttcatacactttatttt-ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgat 36921358  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||| ||||||||    
T  36921357 ttttcatcgaattcgcaacaatt 36921335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 18409309 - 18409189
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg--tt 151  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||| || |||||||||||  ||    
T  18409309 ttttctacttttgtcttgtgattataacttccatacactttgtttt-ggttgcttgactatcacttgctccacacatcaagtttattattggtgtgattt 18409211  T
Q  152 tttgatcggattcacaacaatt 173  Q
    ||| |||| |||||||||||||    
T  18409210 tttcatcgaattcacaacaatt 18409189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 47210752 - 47210659
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||||||||||||||||||||||||    || ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||    
T  47210752 ttttctacttttggcttgtatttaattgttccatacactttgtttt-ggttgctttattatctcttgctccacacatcaagttgttattggtgtg 47210659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 24446620 - 24446501
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| |||  |||||||||| |||| ||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  24446620 ttttctacttttggcttgtgtttataatttttccatacactttatttt-ggttgcttgattatcccttacttcacacatcaagtttgttattggtgtgtt 24446522  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    || | |||| |||||||||||    
T  24446521 ttctcatcgaattcacaacaa 24446501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 3824585 - 3824466
Alignment:
Q  39 ttcttctcgccgttgtttttctactttt-ggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||| || | ||||||||||||||| ||||||| ||||||||| |  |||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  3824585 ttcttcttgctgctgtttttctactttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaag 3824486  T
Q  136 -ttgttattggtgtgttttt 154  Q
     |||||||||||||| ||||    
T  3824485 tttgttattggtgtgatttt 3824466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 33415453 - 33415334
Alignment:
Q  55 ttttctacttttggcttgtatttataactttc--atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | ||  |||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |    
T  33415453 ttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctccacacatcaagtttgttatttgtgtgat 33415354  T
Q  151 ttttgatcggattcacaaca 170  Q
    || | ||||||||| |||||    
T  33415353 ttctcatcggattcgcaaca 33415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 4215673 - 4215768
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||||||||||||||  |||||| |  ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| |||||    
T  4215673 ttttctacttttggcttgtgattataattgtttcatacactttgtttttg-ttgcttgattattccttgcttcacacatcaagttgttatttgtgtg 4215768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 2891662 - 2891780
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||| |||||||||||||| | ||||||||||||||||| |||||||||||||| |    
T  2891662 ttttctacttttggcttgtgtttataattgttccatacactttatttt-ggttgcttgattattctttgctccacacatcaagtttgttattggtgtgat 2891760  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  2891761 ttttcatcgaattcacaaca 2891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 5664607 - 5664722
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||  | | ||||||||||||||| | ||||||||||| |||    
T  5664607 ttttctacttttggtttgtcattataacttccatacactttg-ttttggttgcttgattattaccttctccacacatcaagtattttattggtgtgattt 5664705  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| ||||||||||    
T  5664706 tcatcgaattcacaaca 5664722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 3937209 - 3937125
Alignment:
Q  86 catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| |||| ||||||    
T  3937209 catacactttgttt--ggttgcttgattatcccttgctcctcacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 3937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 47563129 - 47563230
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||| | ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  47563129 ttttctacttttggcttatgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtggt 47563227  T
Q  152 ttt 154  Q
    |||    
T  47563228 ttt 47563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 5101286 - 5101405
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||| | |||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  5101286 ttttctccctttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgatccacacatcaagtttgttattggtgtgtt 5101384  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    || | |||| |||||||||||    
T  5101385 ttctcatcgaattcacaacaa 5101405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 6133207 - 6133302
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 148  Q
    ||||||||||||| ||||| ||||||| |  ||||||||||||||||  |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  6133207 ttttctacttttgacttgtgtttataattgtttcatacactttgtttc-ggttgcttgattattccttgctccacacatcaagtttgttattggtgt 6133302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 24889168 - 24889263
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||||||||||||||  |||||| | |  ||||||||||||||| ||||| | |||||| |||||||||||||||||||||||||||||||||    
T  24889168 ttttctacttttggcttgtgattataattgttccatacactttgtttt-ggttgttagattattccttgctccacacatcaagttgttattggtgtg 24889263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 49088926 - 49089045
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| |||||||| ||| |||||||||| |||||||||||||| |    
T  49088926 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttactcaacacatcaagtttgttattggtgtgat 49089024  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| |||| ||||||    
T  49089025 ttttcatcgaattcgcaacaa 49089045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 12102452 - 12102566
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttg-ttattggtgtgtttt 153  Q
    |||| |||||||| ||||| |||||||||| ||||||||||| ||||||||||| | ||||  ||||||||||||||||||| | ||||||||||| |||    
T  12102452 ttttttacttttg-cttgtgtttataacttccatacactttg-ttttggttgctcggttattacttgctccacacatcaagtagtttattggtgtgattt 12102549  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| ||||||||||    
T  12102550 tcatcgaattcacaaca 12102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 18534797 - 18534687
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||||||||  |||| |||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||| | |||||||||||  ||    
T  18534797 ttttctacttttgt-ttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttattggtgtgagtt 18534700  T
Q  154 tgatcggattcac 166  Q
    | |||| ||||||    
T  18534699 tcatcgaattcac 18534687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 41997860 - 41997958
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    |||||||||||||  ||||  ||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||| || |||||||||||||||    
T  41997860 ttttctacttttgt-ttgtgattataacttccatacactttgtttt-ggttgcttgattatcactttctccacacatcaagtttattattggtgtgtttt 41997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 22800822 - 22800705
Alignment:
Q  56 tttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tt 151  Q
    |||||||||||||||||| ||||||| | |  |||| |||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||| ||    
T  22800822 tttctacttttggcttgtgtttataattgttccatatactttgtttt-ggttgcttgactatcccttgctccccacatcaagtttgttattggtgtgatt 22800724  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| |||| |||||    
T  22800723 tttcatcgaattcgcaaca 22800705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 36919547 - 36919446
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  |||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||||||||| |    
T  36919547 ttttctacttttgacttgtgtttataattgttccatacactttatttt-ggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgat 36919449  T
Q  152 ttt 154  Q
    |||    
T  36919448 ttt 36919446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 37313042 - 37312941
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||| |  |||||| |  ||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| |    
T  37313042 ttttctacttttggcttatgattataattgtttcatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttattattggtgtgat 37312944  T
Q  152 ttt 154  Q
    |||    
T  37312943 ttt 37312941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 40091378 - 40091258
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-- 149  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||| |||||||||||||||  ||||||||||||||||| ||||||||||||||      
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttatttt-ggttgcttgattatcttttgctccacacatcaagtttgttattggtgtgaa 40091280  T
Q  150 tttttgatcggattcacaacaa 171  Q
    ||||| |||| |||| ||||||    
T  40091279 tttttcatcgaattcgcaacaa 40091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 13547524 - 13547625
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||  | |||||| |||| ||||||||||||| ||||||||||||||||    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgtt 13547623  T
Q  152 tt 153  Q
    ||    
T  13547624 tt 13547625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 16455629 - 16455714
Alignment:
Q  86 catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||| ||||| |||| ||||||||||    
T  16455629 catacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaaca 16455714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 56030830 - 56030945
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    |||||||||||||  ||||||||||||||| ||||||||||| |||||||||| ||| |||| ||||||||||| |||||| || ||||||||||| |||    
T  56030830 ttttctacttttgt-ttgtatttataacttccatacactttg-ttttggttgcgtgactatctcttgctccacatatcaagtttattattggtgtgattt 56030927  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| |||| |||||    
T  56030928 ttcatcgaattcgcaaca 56030945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 12395806 - 12395708
Alignment:
Q  57 ttctacttttggcttgtatttataactttc--atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    ||||||||||||| ||| ||||||| |||   |||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  12395806 ttctacttttggcatgtgtttataatttttcgatactctttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgtttt 12395708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 12400768 - 12400670
Alignment:
Q  57 ttctacttttggcttgtatttataactttc--atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    ||||||||||||| ||| ||||||| |||   |||| ||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  12400768 ttctacttttggcatgtgtttataatttttcgatactctttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgtttt 12400670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 19323082 - 19323177
Alignment:
Q  75 tttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||||| |||||||||| |||| | ||||||||||||  ||||||||||||||||||| | ||||||||||| |||| |||| ||||||||||    
T  19323082 tttataacttccatacactttattttag-ttgcttgattattacttgctccacacatcaagtattttattggtgtgattttcatcgaattcacaaca 19323177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 38890189 - 38890070
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg---t 150  Q
    ||||||| ||||| ||||| |||||||||| |||||||||||  |||||||||| |||||| |||||||||||| ||||| | | |||||||||||   |    
T  38890189 ttttctaattttgccttgtgtttataacttccatacactttg--tttggttgctagattattccttgctccacatatcaaatattttattggtgtgattt 38890092  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| ||||||||||||    
T  38890091 tttttatcgaattcacaacaat 38890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 36378661 - 36378780
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtt 151  Q
    |||||||||||| | |||| ||||||| |  ||||||||||||||||  ||||||||||||||  ||||||||||| ||||||| | ||||||||||| |    
T  36378661 ttttctacttttcgtttgtgtttataattgtttcatacactttgttt--ggttgcttgattattacttgctccacatatcaagtattttattggtgtgat 36378758  T
Q  152 tttgatcggattcacaacaatt 173  Q
    ||| |||| |||| ||||||||    
T  36378759 tttcatcgaattcgcaacaatt 36378780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 38270068 - 38269993
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||| |||| |||||||    
T  38270068 ttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtgttttctatcgaattcccaacaat 38269993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 8756221 - 8756101
Alignment:
Q  49 cgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtg 147  Q
    |||||||||| |||||||| ||||| ||||||||| |||  |||||   ||||||||||||||||||  ||||||||||||||||||| | |||||| ||    
T  8756221 cgttgttttt-tacttttg-cttgtgtttataactgtcacccacttg--ttttggttgcttgattattacttgctccacacatcaagtattttattgatg 8756126  T
Q  148 tgtttttgatcggattcacaacaat 172  Q
    || |||| |||| ||||||||||||    
T  8756125 tgattttcatcgaattcacaacaat 8756101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 15032510 - 15032405
Alignment:
Q  52 tgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgt 150  Q
    ||||||||||||||||  || | |||||||||| ||||||||||||||  ||||||||||||||  |||||||| |||||||||| | |||||||||||     
T  15032510 tgtttttctacttttgt-ttatgtttataacttccatacactttgttt--ggttgcttgattattacttgctccgcacatcaagtattttattggtgtga 15032414  T
Q  151 ttttgatcg 159  Q
    |||| ||||    
T  15032413 ttttcatcg 15032405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 18537425 - 18537321
Alignment:
Q  70 ttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaa 168  Q
    |||| |||||||||| ||||||||||||||| | ||||||||||||  ||||||||||||||||||| | |||| ||||||   || |||| ||||||||    
T  18537425 ttgtgtttataacttccatacactttgtttt-gattgcttgattattacttgctccacacatcaagtattttataggtgtgaacttcatcgaattcacaa 18537327  T
Q  169 caatta 174  Q
    ||||||    
T  18537326 caatta 18537321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 47275094 - 47275194
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||  |||| | ||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  47275094 ttttctacttttggcttgtgtttataattattctatacacttcatttt-gattgcttgattatcccttactccacacatcaagtttgttattgatgtgtt 47275192  T
Q  152 tt 153  Q
    ||    
T  47275193 tt 47275194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 52942505 - 52942347
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttct-tctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    ||||||||| |||||||||||  | |||||||| |||  | ||| |||||| |||||||| ||||||||||||||| ||||||| | |  ||||||||||    
T  52942505 accgaactgagtcaacaaattcttttgtgttctctcttcttttcctctcgctgttgtttt-ctacttttggcttgtgtttataattgttccatacacttt 52942407  T
Q  96 gtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgttttt 154  Q
    | ||||| |||| |||||||| ||| ||||||||||| || |||||||| ||||| ||||    
T  52942406 gattttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgatttt 52942347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 27499418 - 27499536
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||| ||||| ||||||| | |  |||| |||||||||| ||||||||| |||| | ||||||||||||||||| |||||||||||||| |    
T  27499418 ttttctacttttgacttgtgtttataattgttccataaactttgtttt-ggttgcttggttattcattgctccacacatcaagtttgttattggtgtgat 27499516  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||| ||||    
T  27499517 ttttcatcgaattcagaaca 27499536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 48486691 - 48486791
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    ||||||||||||||||||| |||||||   || ||| ||||||| |||| |||||||||||||| |||| ||||| |||| || ||||||||||||||||    
T  48486691 ttttctacttttggcttgtgtttataattgttccattcactttg-ttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgtt 48486789  T
Q  152 tt 153  Q
    ||    
T  48486790 tt 48486791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 36380718 - 36380839
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtt 151  Q
    ||||||||||||||||||| |||||||   ||||||||||||||  |||| ||||||||| ||  ||| ||||||||||||| | | ||||||||||| |    
T  36380718 ttttctacttttggcttgtgtttataattgtttcatacactttg--tttgattgcttgatcattacttactccacacatcaaatattttattggtgtgat 36380815  T
Q  152 tttgatcggattcacaacaattat 175  Q
    ||| |||| ||| |||||| ||||    
T  36380816 tttcatcgaattgacaacatttat 36380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 24879362 - 24879423
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattat 115  Q
    ||||||||||||||||||| |||||||   || ||||||||||| ||||||||||||||||||    
T  24879362 ttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattat 24879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 52043526 - 52043411
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgttttt-ggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgttt 152  Q
    |||||||| |||| ||||| ||||||||| |||  ||| |||||||| |||||||||||||| |  ||||||||||||||||| | ||||||||||| ||    
T  52043526 ttttctacgtttg-cttgtgtttataactgtcacccacgttgttttttggttgcttgattattc--tgctccacacatcaagtattttattggtgtgatt 52043430  T
Q  153 ttgatcggattcacaacaa 171  Q
    || | |  |||||||||||    
T  52043429 tttaacaaattcacaacaa 52043411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 619370 - 619316
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtttt 153  Q
    |||||||||||| |||||||| ||||||||||| || || |||||||||||||||    
T  619370 ttggttgcttgactatcccttactccacacatcaaatttattattggtgtgtttt 619316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 28454055 - 28454167
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgt-tattggtgtgtttt 153  Q
    ||||||||||||| ||||| ||||||| | |||| ||||||| |||||||| |||||||||   ||||| ||||||||||||  | |||||||||| |||    
T  28454055 ttttctacttttg-cttgtgtttataattgtcatccactttg-ttttggtttcttgattat--tttgcttcacacatcaagtaatatattggtgtgattt 28454150  T
Q  154 tgatcggattcacaaca 170  Q
    | | || ||||||||||    
T  28454151 tcaacgaattcacaaca 28454167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 16639102 - 16639138
Alignment:
Q  119 ttgctccacacatcaagttgttattggtgtgtttttg 155  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  16639102 ttgctccacacatcaagtttttattggtatgtttttg 16639138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 173
Target Start/End: Complemental strand, 18311275 - 18311212
Alignment:
Q  113 tatcccttgctccacacatcaag-ttgttattggtgtg--tttttgatcggattcacaacaatt 173  Q
    |||| |||||||||||||||||| || |||||||||||  ||||| |||| |||||||||||||    
T  18311275 tatcacttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaatt 18311212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 24880824 - 24880887
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgt-ttttggttgcttgattat 115  Q
    ||||||||||||||||||| |||||||   || | |||||||||| ||||||||||||||||||    
T  24880824 ttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgattat 24880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 30136919 - 30136996
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||| |||| ||||||||||  ||||||||  | |||||||| ||||||||  |||| |||||| |||||    
T  30136919 ttttctacttttggtttgtgtttataacttctatacactt--tatttggttgtttgattattacttgttccacatatcaa 30136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 19504291 - 19504175
Alignment:
Q  57 ttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttga 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  19504291 ttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttca 19504192  T
Q  157 tcggattcacaacaatt 173  Q
    ||| |||||||||||||    
T  19504191 tcgaattcacaacaatt 19504175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 54 - 171
Target Start/End: Complemental strand, 19501959 - 19501842
Alignment:
Q  54 tttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttt 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19501959 tttttctacttttggcttgtatttataacttccatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattt 19501860  T
Q  154 tgatcggattcacaacaa 171  Q
    | |||| |||| ||||||    
T  19501859 tcatcgaattcgcaacaa 19501842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 35215603 - 35215433
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtt 98  Q
    |||||||||||||||||||| |||  ||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||    |||||||  |||||||    
T  35215603 accgaactgggtcaacaaatatctttgtgttcttcttttgttcttctcgccgttgtttt-ctacttttgacttgtatttaattatttcatatgctttgtt 35215505  T
Q  99 tttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  35215504 tt-ggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaaca 35215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35217980 - 35217807
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtt 98  Q
    |||||||||||||||||||| |||  ||||||||||  ||||||||||||||||||||| ||||||||| ||||||||||    || ||||| |||||||    
T  35217980 accgaactgggtcaacaaatatctttgtgttcttcttttgttcttctcgccgttgtttt-ctacttttgacttgtatttaattattccatacgctttgtt 35217882  T
Q  99 tttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    || |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  35217881 tt-ggttgcttaattatctcttgctccacacatcaagttgttattggtgtgatttttgatcagattcacaacaatt 35217807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 23452254 - 23452084
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||| |||||||||||    || |||||||    
T  23452254 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttagcttgtatttaattgttccatacac 23452156  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattc 164  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  23452155 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattc 23452084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 13910062 - 13909908
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  13910062 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 13909964  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13909963 tttgtttt-ggttgcttgattatcccttactccacacatcaagttgttattggtgtg 13909908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 45279975 - 45279864
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  45279975 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctcttgctccacacatcaag 45279878  T
Q  136 ttgttattggtgtg 149  Q
    ||||||||||||||    
T  45279877 ttgttattggtgtg 45279864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 27105035 - 27105195
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||| |||||    || |||||||    
T  27105035 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgcatttaattgttccatacac 27105133  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 154  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  27105134 tttgtttt-ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttt 27105195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 24162240 - 24162086
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||| ||||||||||||||  | ||||||||||||      ||||| |||||||||||||||| ||||||||||||||||||||    ||||||||||    
T  24162240 accgaattgggtcaacaaattcttttgtgttcttctcttctttgtgtttttctcgccgttgtttt-ctacttttggcttgtatttaattgtttcatacac 24162142  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  24162141 ttt-tttttggttgcttgattatctctttctccacacatcaagttgttattggtgtg 24162086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 42923470 - 42923369
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  42923470 ttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgctccacacatcaagtttgttattggtgtgtt 42923371  T
Q  152 tt 153  Q
    ||    
T  42923370 tt 42923369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 36561123 - 36560978
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||||| |||||||| |||||||| |||| |||||||    || ||||| ||||||||| |||||||||||||| ||||||||||    
T  36561123 ttcttcttttgttcttctcgcagttgtttt-ctactttttggctcgtatttaattgttccatacgctttgtttt-ggttgcttgattattccttgctcca 36561026  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  36561025 cacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 36560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 45332154 - 45332019
Alignment:
Q  36 gtgttcttctcgccgttgtttttctac-ttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    || || || ||||| |||||||||||| ||||||||||| ||||||||||||    
T  45332154 gtgttcttctcgccgttg-ttttctactttttggcttgtatttaattgttacaaacgctttg-ttttggttgcttaattatcccttgttccacacatcaa 45332057  T
Q  135 gttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    ||||||||||||||| ||||| |||| |||||||||||    
T  45332056 gttgttattggtgtgatttttcatcgaattcacaacaa 45332019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 36558855 - 36558721
Alignment:
Q  36 gtgttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    ||||||||||||| |||||||| |||||||| |||| |||||||    || ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  36558855 gtgttcttctcgcagttgtttt-ctactttttggctcgtatttaattgttccatacgctttgtttt-ggttgcttgattatcccttgctccacacatcaa 36558758  T
Q  135 gttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||| ||||||||||| ||||| |||| ||||||||||    
T  36558757 gttattattggtgtgatttttcatcgaattcacaaca 36558721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 177
Target Start/End: Original strand, 42453818 - 42453897
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaattatca 177  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||    
T  42453818 ttttggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacaatgatca 42453897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 19007932 - 19008051
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-- 149  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||      
T  19007932 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtgat 19008030  T
Q  150 tttttgatcggattcacaaca 170  Q
    ||||| |||| ||||||||||    
T  19008031 tttttcatcgaattcacaaca 19008051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 21520653 - 21520531
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||  |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  21520653 ttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgtt 21520554  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||| ||||||||    
T  21520553 ttctcatcgaattcgcaacaatt 21520531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 28459155 - 28459038
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtt 151  Q
    |||||||||||||| |||| ||||||| | |  ||||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||| |    
T  28459155 ttttctacttttggtttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtgttttattggtgtgat 28459057  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| ||||||||||    
T  28459056 tttcatcgaattcacaaca 28459038  T

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Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 42064779 - 42064884
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||| ||||||||||| |||||||| |||||||||||    || ||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  42064779 gtgttcttcttgccgttgtttt-ctactttttgcttgtatttaattgttccatacactttgttttag-ttgcttgatcatcccttgctccacacatcaag 42064876  T
Q  136 ttgttatt 143  Q
    ||||||||    
T  42064877 ttgttatt 42064884  T

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Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 17849409 - 17849528
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-- 149  Q
    ||||||||||||||||||| |||| || | |  ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||      
T  17849409 ttttctacttttggcttgtgtttaaaattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgat 17849507  T
Q  150 tttttgatcggattcacaaca 170  Q
    ||||| |||| ||||||||||    
T  17849508 tttttcatcgaattcacaaca 17849528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 28196927 - 28197046
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||| ||||||| || |||||||||||||||||||| || |||||||||||||| |    
T  28196927 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgctggactatcccttgctccacacatcaaatttgttattggtgtgat 28197025  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| | |||||||||    
T  28197026 ttttcatcgaactcacaacaa 28197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 22162987 - 22162887
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    |||||||||||||||||||  |||||||| |  |||||| |||||||| |||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  22162987 ttttctacttttggcttgtgcttataactgttccatacaatttgtttt-ggttgcttgattatcccttgcttcacacatcaaaattgttattggtgtgtt 22162889  T
Q  152 tt 153  Q
    ||    
T  22162888 tt 22162887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 7462908 - 7462825
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    |||||||||||||||||||  |||||| |  ||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  7462908 ttttctacttttggcttgtgattataattgtttcatacactttgtttt-ggttgcttgattatcctttgctccacacatcaagtt 7462825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 174
Target Start/End: Complemental strand, 11739532 - 11739417
Alignment:
Q  62 cttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgat 157  Q
    |||||| ||||||||||||| |  ||||||||||||||||||  || ||||| |||||||||||| |||||||||| |||||||||||||| ||||| ||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttattt-cttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcat 11739434  T
Q  158 cggattcacaacaatta 174  Q
    || ||||||||||||||    
T  11739433 cgaattcacaacaatta 11739417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 22287299 - 22287180
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||| |||| ||||| ||||||| | |  |||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22287299 ttttctacgtttgacttgtttttataattgttccatacactatgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgtt 22287201  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    || | |||| |||||||||||    
T  22287200 ttctcatcgaattcacaacaa 22287180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 3022464 - 3022560
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||| |||||||||||| ||||||| | |  ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  3022464 ttttctgcttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtg 3022560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 14837560 - 14837679
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgtg- 149  Q
    |||| |||||||||||||| ||||||| | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||  ||||||||| ||||     
T  14837560 ttttatacttttggcttgtgtttataattgttctatacactttgtttt-ggttgcttgattatcacttgctccacacatcaagtattgttattgatgtga 14837658  T
Q  150 tttttgatcggattcacaaca 170  Q
    ||| | |||| ||||||||||    
T  14837659 tttctcatcgaattcacaaca 14837679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 170
Target Start/End: Original strand, 22874423 - 22874519
Alignment:
Q  75 tttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||| ||||||||||||||| | |||||||| |||| |||||||||||||||||| || ||||||||||| ||||| |||| ||||||||||    
T  22874423 tttataacttccatacactttgttttag-ttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaaca 22874519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 137
Target Start/End: Complemental strand, 5375311 - 5375225
Alignment:
Q  52 tgtttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||| |||||||| ||||||||||||| | |  ||||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  5375311 tgtttttttacttttgacttgtatttataattgttccatacactttgtttt-gattgcttgattatcccttactccacacatcaagtt 5375225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 20592368 - 20592484
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg--tt 151  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||| ||||||||||||||  ||||||| |||||||| || | |||||||||||  ||    
T  20592368 ttttctacttttg-cttgtgattataacttccatacactttgtttt-ggttgcttgattattacttgctctacacatcacgtattttattggtgtgattt 20592465  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| ||||||||||    
T  20592466 tttcatcgaattcacaaca 20592484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 6258780 - 6258680
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||||| |||||| ||||||| | |  || |||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  6258780 ttttctacttttagcttgtgtttataattgttccagacactttgtttt-ggttgcctgattatcacttgctccacacatcaagtttgttattggtatgtt 6258682  T
Q  152 tt 153  Q
    ||    
T  6258681 tt 6258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 11578072 - 11577957
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--ttt 152  Q
    ||||||||||||||||||| |||| ||||| |||| ||||| |||| ||||||||||||||  |||| ||||||||||||||| |||||  ||||  |||    
T  11578072 ttttctacttttggcttgtgttta-aacttccatatactttatttt-ggttgcttgattattacttgttccacacatcaagtttttattaatgtgatttt 11577975  T
Q  153 ttgatcggattcacaaca 170  Q
    || |||| ||||||||||    
T  11577974 ttcatcgaattcacaaca 11577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 17848760 - 17848816
Alignment:
Q  83 tttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgt 139  Q
    |||||||||||  | ||||||||||||||||||| ||||||||||||||||||||||    
T  17848760 tttcatacactgcgattttggttgcttgattatcacttgctccacacatcaagttgt 17848816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 43623542 - 43623423
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt-gttattggtgtg-t 150  Q
    ||||||||||||||||| |  |||||| | |  ||||||||||  |||||||||| ||||||||  ||||||||||||||||||| |||||||||||| |    
T  43623542 ttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgctccacacatcaagttagttattggtgtgat 43623443  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| |||| |||||    
T  43623442 ttttcatcgaattcgcaaca 43623423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 6264111 - 6263990
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||| ||||||| || |||| | |  ||||||||||||||| |||||| ||||  || |||||||||||||||||| |||||||| |||||||    
T  6264111 ttttctactttcggcttgtgttaataattgttccatacactttgtttt-ggttgcctgatagtcacttgctccacacatcaagtttgttattagtgtgtt 6264013  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||||||||||||    
T  6264012 ttctcatcgaattcacaacaatt 6263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 31732744 - 31732666
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||| ||||  ||||||||| |||||||| || ||||||||||||||||||  |||||| ||||||||||    
T  31732744 ttttctacttttggtttgtgattataacttccatacactctg-ttttggttgcttgattataacttgcttcacacatcaa 31732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 38020372 - 38020473
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    |||||||||||| ||||||  |||||| | |  ||||||||||||||| |||||||||||||| |||||||||| ||||| || |||||||||||||| |    
T  38020372 ttttctacttttagcttgtgattataattgttccatacactttgtttt-ggttgcttgattattccttgctccatacatcaaatttgttattggtgtgat 38020470  T
Q  152 ttt 154  Q
    |||    
T  38020471 ttt 38020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 34979552 - 34979452
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||| | ||||||| | |  |||||||||| |||| |||||||| ||||| |||| |||||||||||||| ||||||||||||||||    
T  34979552 ttttctacttttgacttatgtttataattgttccatacactttatttt-ggttgctttattattccttactccacacatcaagtttgttattggtgtgtt 34979454  T
Q  152 tt 153  Q
    ||    
T  34979453 tt 34979452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 45238962 - 45238841
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttcata--cactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg- 149  Q
    |||||||||||||||||||  |||||||| || |||  ||||| | |||||||||||||| |||| |||| ||||||||||||| || |||||||||||     
T  45238962 ttttctacttttggcttgtgattataactgttgatatccacttcgattttggttgcttgactatcgcttggtccacacatcaagtttattattggtgtga 45238863  T
Q  150 tttttgatcggattcacaacaa 171  Q
    ||||| |||| |||| ||||||    
T  45238862 tttttcatcgaattcgcaacaa 45238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 15539492 - 15539397
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttca-tacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||||||||| |||||| ||||||| | |||| ||||||||||||| | ||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  15539492 ttttctactttttgcttgtgtttataattgttcaatacactttgtttt-gattgcttgataatcc-ttgctccacacatcaagtttgttattggtgtg 15539397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 17897211 - 17897099
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    ||||||||||||| ||||| ||||||||| ||||  |||||||||| ||||||||||||||   |||||||||||||||||| | |||||| ||| ||||    
T  17897211 ttttctacttttg-cttgtgtttataactgtcatcaactttgtttt-ggttgcttgattatt--ttgctccacacatcaagtattttattgatgtatttt 17897116  T
Q  154 tgatcggattcacaaca 170  Q
    | | || ||||||||||    
T  17897115 ttaacgaattcacaaca 17897099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 16375461 - 16375549
Alignment:
Q  172 ttatcactctgttattggttgactatacgaagagggagcaagaagtgttgttatgaataacattgcacaaagggtggaaaagttgctac 260  Q
    |||||||||| |||| | | |||||||| ||| |||| |||||||||||||||||| ||| ||| |||||| ||||||  |||||||||    
T  16375461 ttatcactctattatcgatagactatacaaagggggatcaagaagtgttgttatgattaagattacacaaaaggtggatgagttgctac 16375549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 22707714 - 22707613
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    |||||||||| || ||||| ||||||| | |  ||||||||||||||| |||||||||||| | |||| ||||||||||| || |||||||||||||| |    
T  22707714 ttttctacttctgccttgtgtttataattgttccatacactttgtttt-ggttgcttgattgttccttactccacacatcaaatttgttattggtgtggt 22707616  T
Q  152 ttt 154  Q
    |||    
T  22707615 ttt 22707613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 22407417 - 22407346
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    ||||||||||||||||||| |||||||   || ||||||||||| |||||||||||||| |||| ||||||||    
T  22407417 ttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatctcttgctcc 22407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 13828290 - 13828176
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||||||||  |||| ||||||||| |||  ||| ||| | ||||||||||||||||   |||||||||||||||| | | ||||||||||| |||    
T  13828290 ttttctacttttgt-ttgtgtttataactgtcacccacgttgatattggttgcttgattat--tttgctccacacatcaaatattttattggtgtgattt 13828194  T
Q  154 tgatcggattcacaacaa 171  Q
    | | || |||||||||||    
T  13828193 ttaacgaattcacaacaa 13828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 23871108 - 23871205
Alignment:
Q  55 ttttctacttttggcttgtatttataa----ctttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgt 148  Q
    ||||||||||||| ||||| |||||||     |||||||||||||| ||||||||  || ||| | |||||||||||||||| || |||||||||||||    
T  23871108 ttttctacttttgccttgtgtttataattgtttttcatacactttg-ttttggttatttaattgttccttgctccacacatcaaatttgttattggtgt 23871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 153
Target Start/End: Complemental strand, 42923347 - 42923311
Alignment:
Q  118 cttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    |||||||||||||||||| ||||||||||||||||||    
T  42923347 cttgctccacacatcaagtttgttattggtgtgtttt 42923311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7351669 - 7351488
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||||||||||||||  ||||||||||        |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7351669 accgaactgggtcaacaaatttctttgtgttcttcttcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcataca 7351571  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaacaatt 173  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||  ||||| |||| |||||||||||||    
T  7351570 ctttg-ttttggttgcttaattatcccttactccacacatcaagttgttattggtgtgattttttcatcgaattcacaacaatt 7351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 9027166 - 9027034
Alignment:
Q  37 tgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9027166 tgttcttctagccgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagt 9027069  T
Q  137 tgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||| ||||| |||| |||| |||||    
T  9027068 tgttattggtgtgatttttcatcgaattcgcaaca 9027034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 38394258 - 38394437
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  38394258 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 38394356  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  38394357 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 38394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 175
Target Start/End: Complemental strand, 7349248 - 7349112
Alignment:
Q  38 gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||    
T  7349248 gttcttctcgccgttgttttt--acttttggcttgtatttataactttcatacactttatttt-ggttgcttaattatcccttactccacacatcaagtt 7349152  T
Q  138 gttattggtgtg--tttttgatcggattcacaacaattat 175  Q
    ||||||||||||  ||||| |||| |||||||||||||||    
T  7349151 gttattggtgtgattttttcatcgaattcacaacaattat 7349112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20297634 - 20297813
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||| |||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  20297634 accgaactgggtcaataaattcttttgtgttcttctcctctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 20297732  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  20297733 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 20297813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 1049269 - 1049152
Alignment:
Q  36 gtgttcttctcgccgttgttttt-ctac--ttttggcttgtatttataactttcatacactttgttttt-ggttgcttgattatcccttgctccacacat 131  Q
    |||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1049269 gtgttcttcttgccgttgttttttctacctttttggcttgtatttataactttcatacactttgttttttggttgcttgattatctcttgctccacacat 1049170  T
Q  132 caagttgttattggtgtg 149  Q
    ||||||||||||||||||    
T  1049169 caagttgttattggtgtg 1049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 11759399 - 11759576
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  11759399 accgaactgggtcaacaaattcttttgtgttcttctctcctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 11759497  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||    
T  11759498 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 11759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7471997 - 7471838
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||| |||||||||| ||||||||||||||||||||    || |||||||    
T  7471997 accgaactgggtcaacaaattcttttgtgttcttctcttatttgtgttcttctcaccgttgtttt-ctacttttggcttgtatttaattgttccatacac 7471899  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7471898 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatttt 7471838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 48457925 - 48458100
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||| ||||||||||    || |||||||    
T  48457925 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttgacttgtatttaattgttccatacac 48458023  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  48458024 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 48458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 154
Target Start/End: Complemental strand, 1046898 - 1046775
Alignment:
Q  36 gtgttcttctcgccgttgttttt-ctac--ttttggcttgtatttataactttcat-acactttgttttt-ggttgcttgattatcccttgctccacaca 130  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  1046898 gtgttcttctcgccgttgttttttctacctttttggcttgtatttataacttccattacactttgttttttggttgcttgattatctcttgctccacaca 1046799  T
Q  131 tcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||||||| ||||    
T  1046798 tcaagttgttattggtgtgatttt 1046775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 1606651 - 1606827
Alignment:
Q  1 accgaactgggtcaacaaatttc--tgtgttcttctcgt------gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||||  |||||||||||  |      |||||||||||||||||||| ||||||||||||||||||||    || ||||| |    
T  1606651 accgaactgggtcaacaaatttccttgtgttcttcttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattattccatacgc 1606749  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  1606750 tttgtttt-ggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 1606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 20299732 - 20299908
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||| |||||||| ||||||||||||||||||||    || |||||||    
T  20299732 accgaactgggtcaacaaattcttttgtgttcttctctcctttgtgttcttctcgcagttgtttt-ctacttttggcttgtatttaattgttccatacac 20299830  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||  ||||||||||    
T  20299831 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttttcatcaaattcacaaca 20299908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 40946600 - 40946777
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgttttt-ctacttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||  | |||||||||||       ||||||||||||||||| ||||| ||| ||||||||||||||||    |||||||||    
T  40946600 accgaactgggtcaacaaattcttttgtgttcttcttttctttgtgttcttctcgccgtttttttttctatttttggcttgtatttaattgtttcataca 40946699  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || | |||| ||||||||||    
T  40946700 ctttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattgatgtgattctcatcgaattcacaaca 40946777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40836760 - 40836601
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgt------gttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | |||||||||||| |      |||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  40836760 accgaactgggtcaacaaattcttttgtgttcttctcttctttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 40836662  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  40836661 tttgtttt-ggttgtttgattatcccttgctccacacatcaagttgttattggtgtgatttt 40836601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 43253534 - 43253358
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||| |||||  | ||||||||||||      ||||||||||||| |||||||||||||||||| ||||||||||    || |||||||    
T  43253534 accgaactgggtcaataaattcttttgtgttcttctcttctttgtgttcttctcgctgttgtttttctacttttgacttgtatttaattgttccatacac 43253435  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||| |||| |||| |||||    
T  43253434 tttgtttt-ggttgcttgattatctcttgctccacacatcaaattgttattggtgtgattttcatcgaattcgcaaca 43253358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44836 - 44990
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||| |||||||||||    || |||||||    
T  44836 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctactttttgcttgtatttaattgttccatacac 44934  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  44935 tttgtttt-ggttgcttgattatccattgctccacacatcaagttgttattggtgtg 44990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 1850253 - 1850407
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||| || | |||||||| ||||||||||||||||||||    ||||||||||    
T  1850253 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttttcactgttgtttt-ctacttttggcttgtatttaattgtttcatacac 1850351  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1850352 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 1850407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 18345813 - 18345971
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||| |||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  18345813 accgagctgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 18345911  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttt 153  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  18345912 tttgtttt-ggttgcttgactatcccttgctccacacatcaagttgttgttggtgtgtttt 18345971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25542800 - 25542976
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | |||||| |||||      ||||||||||| |||||||||| ||||||||||||||||||||    || ||||||     
T  25542800 accgaactgggtcaacaaattcttttgtgtttttctcttctttgtgttcttctcaccgttgtttt-ctacttttggcttgtatttaattgttccatacat 25542898  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  25542899 tttgtttt-gattgcttgattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 25542976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 38396906 - 38397080
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgttttt----ctacttttggcttgtatttataactttcat 88  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||||    ||||||||||||||||||||    ||  ||    
T  38396906 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttttttctacttttggcttgtatttaattgttctat 38397005  T
Q  89 acactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattc 164  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  38397006 acactttgtttt-ggttgctttattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattc 38397080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28485837 - 28486016
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | |||||| |||||      ||||||||||  |||||||||| ||||||||||||||||||||    || ||||||     
T  28485837 accgaactgggtcaacaaattcttttgtgttattctcttctttgtgttcttctatccgttgtttt-ctacttttggcttgtatttaattgttccatacat 28485935  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |||||||||||||    
T  28485936 tttgtttt-ggttgcttgattatcccttgctccacatatcaagttgttattggtgtgatttttcatcgaattcacaacaatt 28486016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 35901 - 36055
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||| ||||||||||| |  |||||||||||      |||||||||||||| ||||||| |||||||||| |||||||||    || |||||||    
T  35901 accgaactggatcaacaaatttttttgtgttcttctcttctttgtgttcttctcgccattgtttt-ctacttttggtttgtatttaattgttccatacac 35999  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36000 tttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 36055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3878849 - 3879005
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||||||||||||||||||||||||| |||||||||    || ||||||     
T  3878849 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttttctacttttggtttgtatttaattgttccatacat 3878948  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||  ||||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  3878949 ttttgttttggttgcttgattatctcttgctccacacatcaagttattattgatgtg 3879005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 28487868 - 28487984
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||    || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28487868 gtgttcttctagccgttgtttt-ctacttttgacttgtatttaattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 28487965  T
Q  136 ttgttattggtgtgttttt 154  Q
    |||||||||||||| ||||    
T  28487966 ttgttattggtgtgatttt 28487984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2935540 - 2935716
Alignment:
Q  1 accgaactgggtcaacaaatttc--tgtgttcttctcgt------gttcttctcgccgttgtttttctactttt-ggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||||  |||||||||||  |      |||||||||||||||||||| |||||||| ||||||||||||    || |||||     
T  2935540 accgaactgggtcaacaaatttccttgtgttcttcttcttcttttgttcttctcgccgttgtttt-ctactttttggcttgtatttaattgttccatacg 2935638  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||||||||    
T  2935639 ctttgtttt-ggttgcttaattatcccttgcttcacacatcaagttgttattggtgtgattttcatcgaattcacaaca 2935716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 20626366 - 20626481
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  20626366 ttttctacttttggcttatatttataacttccatacactttatttt-ggttgcttgattatctcttgctccacacatcaggttgttattggtgtgatttt 20626464  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| |||| |||||    
T  20626465 tcatcgaattcgcaaca 20626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 20630257 - 20630372
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  20630257 ttttctacttttggcttatatttataacttccatacactttatttt-ggttgcttgattatctcttgctccacacatcaggttgttattggtgtgatttt 20630355  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| |||| |||||    
T  20630356 tcatcgaattcgcaaca 20630372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 20642676 - 20642791
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  20642676 ttttctacttttggcttatatttataacttccatacactttatttt-ggttgcttgattatctcttgctccacacatcaggttgttattggtgtgatttt 20642774  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| |||| |||||    
T  20642775 tcatcgaattcgcaaca 20642791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 3035996 - 3036150
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||| ||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  3035996 accgaactgggtcaacaaattcttttgtgttcctctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 3036094  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  3036095 tttgtttt-ggttgcttgattatctcttgctccaaacatcaaattgttattggtgtg 3036150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7470039 - 7469863
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||| |||||||||| ||||||||||||||||||||    || |||||||    
T  7470039 accgaactgggtcaacaaattcttttgtgttcttctcttatttgtgttcttctcaccgttgtttt-ctacttttggcttgtatttaattgttccatacac 7469941  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||| | |||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||| |||| ||||||    
T  7469940 tttgttttag-ttgcttgattatccct-gctccacacatcaaattgttattggtgtgatttttcatcgaattcgcaacaa 7469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 31155902 - 31155811
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgt--ttttggttgcttgattatcccttgctcca 126  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||||||||    
T  31155902 gtgttcttctcgccgtt-tttttctacttttggcttgtatttataactttcatacactttgtttttttggtttcttaattatcccttgctcca 31155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 22137384 - 22137527
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||| |||||||||    
T  22137384 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatctcttgctcca 22137482  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||    
T  22137483 cacatcaagttgttattggtgtgatttttcgtcgaattcacaaca 22137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 40550133 - 40550280
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgttttt-ctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||  |||||||||| | ||||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||    
T  40550133 ttcttcttttgttcttctcacagttgttttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcc 40550231  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  40550232 acacatcaagttgttattggtgtgatttttcgtcgaattcacaacaatt 40550280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 170
Target Start/End: Original strand, 40552411 - 40552554
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||| |||||||||    
T  40552411 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatctcttgctcca 40552509  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||    
T  40552510 cacatcaagttgttattggtgtgatttttcgtcgaattcacaaca 40552554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 7094434 - 7094298
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    || || |||||||  |||||||||||||| ||| |||||||||||||||||||    
T  7094434 gtgttcttctcgccgttg-ttttctacttttgacttgtatttaattgttccacacacttt-attttggttgcttgactatgccttgctccacacatcaag 7094337  T
Q  136 -ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
     |||||||||||||| |||| |||| |||| ||||||||    
T  7094336 tttgttattggtgtgattttcatcgaattcgcaacaatt 7094298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 7188863 - 7188982
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtg--tt 151  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||||||| | |||||| ||||  ||    
T  7188863 ttttctacttttg-cttgtgtttataacttccatacactttgtttt-ggttgcttgattattacttgctccacacatcaagtattttattgatgtgattt 7188960  T
Q  152 tttgatcggattcacaacaatt 173  Q
    |||||||| |||||||||||||    
T  7188961 tttgatcgaattcacaacaatt 7188982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 22251548 - 22251448
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||||    
T  22251548 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgtttgattatcccttgctcaacacatcaagtttgttattggtgtgtt 22251450  T
Q  152 tt 153  Q
    ||    
T  22251449 tt 22251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 13099435 - 13099313
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||| |    
T  13099435 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgtttgacgatcccttgctccacacatcaagtttgttattggtgtgat 13099337  T
Q  151 ttttgatcggattcacaacaatta 174  Q
    |||| |||| ||||||||||||||    
T  13099336 ttttcatcgaattcacaacaatta 13099313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 44724903 - 44725004
Alignment:
Q  55 ttttctacttttggcttgtatttataac---tttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 150  Q
    ||||||||||||||||||| |||||||    || ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  44724903 ttttctacttttggcttgtgtttataatatgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgt 44725001  T
Q  151 ttt 153  Q
    |||    
T  44725002 ttt 44725004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7092230 - 7092051
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||| ||| ||||||||||||| ||| ||||||    || || ||||    
T  7092230 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccattg-ttttctacttttgacttatatttaattgttccacacac 7092132  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||  |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||| |||  ||||||||    
T  7092131 ttt-attttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaatttgcaacaatt 7092051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 26295770 - 26295868
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||| | ||||||| |||||||||  ||||||||||| ||||    
T  26295770 ttttctacttttggcttgtgtttataattttcatacactttg-ttttgattgcttgattatcacgtgctccatacatcaagtatttattggtgtgatttt 26295868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 9679385 - 9679486
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||||    
T  9679385 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtgtt 9679484  T
Q  152 tt 153  Q
    ||    
T  9679485 tt 9679486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 24748919 - 24749038
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg--tt 151  Q
    |||||||||||||  ||||  ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||  ||    
T  24748919 ttttctacttttgt-ttgtgattataacttccatacactttgtttt-ggttgtttgattatcccttgctccacacatcaagtttgttattggtgtggttt 24749016  T
Q  152 tttgatcggattcacaacaatt 173  Q
    | | |||| |||||||||||||    
T  24749017 tctcatcgaattcacaacaatt 24749038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 11355585 - 11355707
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-- 149  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||||| ||||||| |||||||||||||||| || || |||||||||||      
T  11355585 ttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgat 11355684  T
Q  150 tttttgatcggattcacaacaat 172  Q
    ||||| |||| |||| |||||||    
T  11355685 tttttcatcgaattcccaacaat 11355707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 24465859 - 24465982
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg-ttt 152  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| |||||||||||||| |||| |||| |||||||||| || || ||||||||||| |||    
T  24465859 ttttctacttttggtttgtgattataacttccatacactttg-ttttggttgcttgaatatcacttgttccacacatcaaatttattattggtgtgattt 24465957  T
Q  153 ttgatcggattcacaacaattatca 177  Q
    || |||| ||||||||||| |||||    
T  24465958 ttcatcgaattcacaacaactatca 24465982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 21678388 - 21678509
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  | ||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||| |||||| |    
T  21678388 ttttctacttttggcttgtgtttataattgttccttacactttgtttt-ggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgat 21678486  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    |||| |||| |||||||||||||    
T  21678487 ttttcatcgaattcacaacaatt 21678509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 42223482 - 42223583
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| |  || ||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  42223482 ttttctacttttgccttgtgtttataattgttttatacactttatttt-ggttgcttgattatcccttactccacacatcaagtttgttattggtgtgtt 42223580  T
Q  152 ttt 154  Q
    |||    
T  42223581 ttt 42223583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 1502883 - 1502814
Alignment:
Q  103 gttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| || | ||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcattgaattcacaacaat 1502814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 21990480 - 21990560
Alignment:
Q  59 ctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||||||||||| ||||||| | |  ||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21990480 ctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtt 21990560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 42330964 - 42330881
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  42330964 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatccattgctccacacatcaagtt 42330881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 21680354 - 21680472
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt-gt 150  Q
    ||||||||||||||||||| |||||||   || |||||||||||||||| ||||| ||||||| ||||||| ||||||||||| ||||||||||||| |     
T  21680354 ttttctacttttggcttgtgtttataattgttccatacactttgttttt-gttgcatgattattccttgcttcacacatcaagcttgttattggtgtggg 21680452  T
Q  151 ttttgatcggattcacaaca 170  Q
    |||| |||| ||||||||||    
T  21680453 ttttcatcgaattcacaaca 21680472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 22108373 - 22108484
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgttttt-ctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||  |||||||||| | ||||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||    
T  22108373 ttcttcttttgttcttctcacagttgttttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcc 22108471  T
Q  126 acacatcaagttg 138  Q
    |||||||||||||    
T  22108472 acacatcaagttg 22108484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 4295899 - 4295798
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||| | | ||| |||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||| |    
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttgtttt-ggttgcttgatgattccttgctccacacatcaagtttgttattggtgtgat 4295801  T
Q  152 ttt 154  Q
    |||    
T  4295800 ttt 4295798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 9681146 - 9681247
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||  | |||||| |||| ||||||||||||| ||||||||||||||||    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttccacacatcaagtttgttattggtgtgtt 9681245  T
Q  152 tt 153  Q
    ||    
T  9681246 tt 9681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 27832604 - 27832487
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-ttt 152  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| |||||||| |||||||||  | |||||||||||| ||| ||||||||||| || |||    
T  27832604 ttttctacttttggtttgtgattataacttccatacactttg-ttttggttacttgattatttcctgctccacacattaagtttgttattggtatgattt 27832506  T
Q  153 ttgatcggattcacaacaa 171  Q
    || |||| |||||||||||    
T  27832505 ttcatcgaattcacaacaa 27832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 443924 - 444020
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttca-tacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||||||||||||||||  |||||| | |||| ||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  443924 ttttctacttttggcttgtgattataattgttcaatacactttgtttt-ggttgcttgactattccttgctccacacatcaagtttgttattggtgtg 444020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 149
Target Start/End: Complemental strand, 27306243 - 27306098
Alignment:
Q  5 aactgggtcaacaaatttctgtgttcttctcgtgttct-tctcgccgttgtttttctacttttggcttgtatttataacttt--catacactttgttttt 101  Q
    |||||||||||||||||  |||||||| ||| | || | |||||| |||||||| || ||||||||||||  |||||| | |  |||||||||||||||     
T  27306243 aactgggtcaacaaattcttgtgttct-ctcttcttttctctcgctgttgtttt-cttcttttggcttgtgattataattgttccatacactttgtttt- 27306147  T
Q  102 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  27306146 ggttgcttgactatcccttgttccacacatcaagtttgttattggtgtg 27306098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 6349122 - 6349239
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttt 153  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||||| ||||||||||||||  ||||||||| || ||||||  |||||||||||  |||    
T  6349122 ttttctacttttg-cttgtgtttataacttccgtacactttgtttt-ggttgcttgattattacttgctccatacgtcaagtatttattggtgtgagttt 6349219  T
Q  154 tgatcggattcacaacaatt 173  Q
    ||| ||  ||||||||||||    
T  6349220 tgaacgatttcacaacaatt 6349239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 31435011 - 31434910
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| |||||||   || | ||||||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  31435011 ttttctacttttggcttgtgtttataattgttccttacacttt-attttgattgcttgattattccttgctccacacatcaagtttgttattggtgtgat 31434913  T
Q  152 ttt 154  Q
    |||    
T  31434912 ttt 31434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 26804837 - 26804933
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 149  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||||||| |||||||||| ||||| |||||||||||||| || ||||||||||||||    
T  26804837 ttttctacttttgacttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcctttgctccacacatcaaatttgttattggtgtg 26804933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 37412085 - 37411989
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||| |||||||||||  |||||| | |  ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  37412085 ttttctagttttggcttgtgattataattgttccatacactttgtttt-ggttgcttgattattccttgttccacacatcaagtttgttattggtgtg 37411989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 39145949 - 39145856
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggt 146  Q
    |||||||||||||| |||| ||||||| |  || ||||| |||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||    
T  39145949 ttttctacttttggtttgtgtttataattgtttaatacaatttgtttt-ggttgcttgattatcacttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 21592106 - 21592024
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||  |||||||||  |||||||| ||||||||||||||||||||    
T  21592106 ttttctacttttggcttgtgtttataattgttccatacacttt--ttttggttgtctgattatcacttgctccacacatcaagtt 21592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 22394047 - 22394119
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccaca 128  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| ||||||||| |||| |||| |||||||||||    
T  22394047 ttttctacttttggtttgtgattataacttccatacactttg-ttttggttgtttgactatcacttgctccaca 22394119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 20091101 - 20091041
Alignment:
Q  76 ttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||| |||||||||||| | |||||||||||||||  ||||||| |||||||||||    
T  20091101 ttataacttccatacactttgtatctggttgcttgattattacttgctcaacacatcaagt 20091041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 25276487 - 25276566
Alignment:
Q  90 cactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||| | ||||||||||||||| |  ||| ||||||||||||||||||||||||||| ||||| | || ||||||||||    
T  25276487 cactttgatattggttgcttgattaac--ttgatccacacatcaagttgttattggtgtgattttttagcgaattcacaaca 25276566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 20137066 - 20137030
Alignment:
Q  98 ttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaa 20137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 24813419 - 24813348
Alignment:
Q  100 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||||||||||  ||||||||||||||||||| | |||||| |||| |||| |||| | ||||||||    
T  24813419 ttggttgcttgattattacttgctccacacatcaagtattttattgatgtgattttcatcgaactcacaaca 24813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 31153740 - 31153690
Alignment:
Q  122 ctccacacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||||||||||||||||| ||||| |||| |||| ||||||    
T  31153740 ctccacacatcaagttgttattggtgtgatttttcatcgaattcgcaacaa 31153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 39798335 - 39798470
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  39798335 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaaa 39798432  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    |||||||||||||| ||||| |||| |||| |||||||    
T  39798433 ttgttattggtgtgatttttcatcgaattcgcaacaat 39798470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 31543029 - 31543175
Alignment:
Q  26 tgttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  31543029 tgttcttcttttgttctcctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgctttgtttt-ggttgcttgattaacccttgctcc 31543126  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||||    
T  31543127 acacatcaagttgttattggtgtgattattgatcagattcacaacaatt 31543175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 31179388 - 31179213
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactt 94  Q
    |||||||||||||||||||||||||||||||||||      |||||||||||||||||||| ||||||||||||||||| ||||    || |||||||||    
T  31179388 accgaactgggtcaacaaatttctgtgttcttctcttctttgtgttcttctcgccgttgttcttctacttttggcttgtgtttaattattccatacactt 31179289  T
Q  95 tgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||    
T  31179288 tgtttt-ggttgcttaattatcccttgctccatacatcaagttgttattggtgtgatttttcatcgaattcacaaca 31179213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 34477070 - 34476892
Alignment:
Q  1 accgaactgggtcaacaaatt-tct-gtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    ||||||||||||||||||||| ||| |||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  34477070 accgaactgggtcaacaaattctcttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 34476972  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaat 172  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||||    
T  34476971 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaacaat 34476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 170
Target Start/End: Complemental strand, 38960104 - 38959972
Alignment:
Q  37 tgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38960104 tgttcttcttgtcgttgtttt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagt 38960007  T
Q  137 tgttattggtgtg-tttttgatcggattcacaaca 170  Q
    ||||||||||||| ||||| |||| |||| |||||    
T  38960006 tgttattggtgtgatttttcatcgaattcgcaaca 38959972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 10749996 - 10750140
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||    
T  10749996 ttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccac 10750094  T
Q  128 acatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  10750095 acatcaagttgttattggtgtgattttgatcgaattcacaacaatt 10750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 18466946 - 18467126
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||| ||||||||      |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  18466946 accgaactgggtcaacaaattcttttgttttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataacttccatacac 18467044  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||| |||||||||||||    
T  18467045 tttg-ttttgattgcttgattatcccttgctccacacatcaagtttgttattagtgtgatttttcatcgaattcacaacaatt 18467126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 18469314 - 18469448
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18469314 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttataacttccatacactttg-ttttggttgcttgattatcccttgctccacacatcaag 18469411  T
Q  136 -ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
     ||||||||||| || ||||| |||| ||||||||||    
T  18469412 tttgttattggtatgatttttcatcgaattcacaaca 18469448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 2175206 - 2175341
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2175206 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgtttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaag 2175303  T
Q  136 ttgttattggtgtg---tttttgatcggattcacaaca 170  Q
    ||||||||||||||   |||||||||| ||||||||||    
T  2175304 ttgttattggtgtgacttttttgatcgaattcacaaca 2175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 10757472 - 10757614
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||    || ||||| ||||| |||||||||||| |||||||||||||||||    
T  10757472 ttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgctttgattttggttgcttaattatcccttgctccac 10757570  T
Q  128 acatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||||||||||||||||| ||||||||| |||||||||||    
T  10757571 acatcaagttgttattggtgtgattttgatcgaattcacaacaa 10757614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 34479435 - 34479256
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||| |||||    || |||||||    
T  34479435 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgcatttaattgttccatacac 34479337  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  |||| ||||||||    
T  34479336 tttgattttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcaaattcgcaacaatt 34479256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 10587120 - 10587252
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10587120 gtgttcttctcgccgttgtttt-ctacttttgacttgtatttataacttccatacactttg-ttttggttgcttgattat-ccttgctccacacatcaag 10587216  T
Q  136 -ttgttattggtgtgtttttgatcggattcacaaca 170  Q
     |||||||||||||| |||| |||| ||||||||||    
T  10587217 tttgttattggtgtgattttcatcgaattcacaaca 10587252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 27912798 - 27912973
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  27912798 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttagcttgtatttataacttccatacac 27912896  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaa 168  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||| |||| ||||||||    
T  27912897 tttg-ttttggttgcttgattatcccttactccacacatcaagtttgttattggtgggatttttcatcgaattcacaa 27912973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4410284 - 4410459
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||| |||| |||||| |||||| |||||||||||||||||||||||||| |||||||    
T  4410284 accgaactgggtcaacaaattcttttgtgttcttctctactttgtgctcttttcgccgctgtttt-ctacttttggcttgtatttataacttccatacac 4410382  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
     ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||| ||||||    
T  4410383 ctt--ttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcaacgaattcgcaacaa 4410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 25921490 - 25921336
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || |||||||    
T  25921490 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 25921392  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25921391 tttatttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 25921336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 38882393 - 38882525
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  38882393 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctcttgctccacacatcaag 38882490  T
Q  136 ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||||||||| |||| |||| |||| |||||    
T  38882491 ttgttattggtgtgattttcatcgaattcgcaaca 38882525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 3373154 - 3372977
Alignment:
Q  1 accgaactgggtcaacaaatttctgtgt--------tcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||||| |||        ||||||  || |||||||||||||||||| ||||||||||||||||||||    || ||||| |    
T  3373154 accgaactgggtcaacaaatttctttgtgttcttcttcttcttttgctcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacgc 3373056  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||    
T  3373055 tttgattttggttgcttaattatcccttgctccacacatcaagttgttattggtgtgatttttcatcgaattcacaaca 3372977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 10529116 - 10528955
Alignment:
Q  1 accgaactgggtcaacaaatt---tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    |||||||||||||||||||||   | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || ||||||    
T  10529116 accgaactgggtcaacaaattctttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccataca 10529018  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10529017 ctttgattttggttgcctgattatcccttgcttcacacatcaagttgttattggtgtgatttt 10528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 15552507 - 15552685
Alignment:
Q  1 accgaactgggtcaacaaatttct--gtgttcttctc-------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcataca 91  Q
    ||||||||||||||||||||||||  ||||||||||        |||||||||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  15552507 accgaactgggtcaacaaatttctttgtgttcttcttcttctttgtgttcttctcgccattatttt-ctacttttagcttgtatttataactttcataca 15552605  T
Q  92 ctttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg--tttttgatcggattcacaaca 170  Q
    ||||| |||| |||||||||||||||||| || ||| |||||||||||||||||||||  ||||| |||| ||||||||||    
T  15552606 ctttg-ttttagttgcttgattatcccttacttcacgcatcaagttgttattggtgtgattttttcatcgaattcacaaca 15552685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 21684469 - 21684294
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||| |||||||||| ||||||||||||| ||||||    || |||||||    
T  21684469 accgaactgggtcaacaaattcgtttgtgttcttctcttttttgtgttcttctctccgttgtttt-ctacttttggcttttatttaattgttccatacac 21684371  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  21684370 tttgtttt-gattgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 21684294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 27910738 - 27910875
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aa 134  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||| ||    
T  27910738 gtgttcttctcgccgttgtttta-tacttttagcttgtatttataacttccatacactttatttt-ggttgattgattatcccttgctccacacatcaaa 27910835  T
Q  135 gttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
     |||||||||||||| ||||| |||| |||||||||||||    
T  27910836 tttgttattggtgtgatttttcatcgaattcacaacaatt 27910875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 25804329 - 25804440
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  25804329 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctcttgctccacacatcaag 25804426  T
Q  136 ttgttattggtgtg 149  Q
    ||||||||||||||    
T  25804427 ttgttattggtgtg 25804440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 31545380 - 31545499
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||  ||||||||||| ||||| ||||||    
T  31545380 ttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttataactttcatacgcttt-attttaattgcttgattaacccttactccac 31545477  T
Q  128 acatcaagttgttattggtgtg 149  Q
    ||||||||||||||||||||||    
T  31545478 acatcaagttgttattggtgtg 31545499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 15356833 - 15356687
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| ||||||||||||||||    
T  15356833 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcca 15356735  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  15356734 cacatcaagttgttattggtgtgatttttcgtcgaattcacaacaatt 15356687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 4236933 - 4237065
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    || ||||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  4236933 gtgttcttctcaccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctcttgcttcacacatcaag 4237030  T
Q  136 ttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||||||||| |||| | || ||||||||||    
T  4237031 ttgttattggtgtgattttcaacgaattcacaaca 4237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 15354557 - 15354412
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| ||||||||||||||||    
T  15354557 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcca 15354459  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  15354458 cacatcaagttgttattggtgtgatttttcgtcgaattcacaacaat 15354412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 23665340 - 23665487
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgttttt-ctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||  |||||||||| | ||||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||    
T  23665340 ttcttcttttgttcttctcacagttgttttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcc 23665438  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  23665439 acacatcaagttgttattggtgtgatttttcgtcgaattcacaacaatt 23665487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 173
Target Start/End: Complemental strand, 23793247 - 23793100
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgttttt-ctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||  |||||||||| | ||||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||    
T  23793247 ttcttcttttgttcttctcacagttgttttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcc 23793149  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  23793148 acacatcaagttgttattggtgtgatttttcgtcgaattcacaacaatt 23793100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 23741841 - 23741697
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgttttt-ctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcc 125  Q
    |||||||  |||||||||| | ||||||||| |||||||||||| |||||| || | || ||||| ||||| |||||||||||| |||||||||||||||    
T  23741841 ttcttcttttgttcttctcacagttgttttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcc 23741743  T
Q  126 acacatcaagttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||||||||||||| |||||  ||| ||||||||||    
T  23741742 acacatcaagttgttattggtgtgatttttcgtcgaattcacaaca 23741697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 21948348 - 21948450
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttt-tggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 150  Q
    ||||||||||||||||||| ||||||| | |  |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgt 21948447  T
Q  151 ttt 153  Q
    |||    
T  21948448 ttt 21948450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 41585698 - 41585578
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||||||| |    
T  41585698 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatctcttgccccacacatcaagtttgttattggtgtgat 41585600  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| ||||||||||||    
T  41585599 ttttcatcgaattcacaacaat 41585578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 36402289 - 36402168
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||| |||||| ||||||| | ||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |    
T  36402289 ttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgat 36402190  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| |||| |||||||    
T  36402189 ttttcatcgaattcgcaacaat 36402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 159
Target Start/End: Complemental strand, 2818296 - 2818189
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||| ||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  2818296 ttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgctccatacatcaagtttgttattggtgtgtt 2818197  T
Q  152 tttgatcg 159  Q
    ||| ||||    
T  2818196 tttcatcg 2818189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 17818453 - 17818352
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |    
T  17818453 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgttattggtgtggt 17818355  T
Q  152 ttt 154  Q
    |||    
T  17818354 ttt 17818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 6756808 - 6756909
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag--ttgttattggtgtgt 150  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||| | |||| |||||||| ||||||||||||||||||  |||||||||||||||    
T  6756808 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt-gattgcctgattatcacttgctccacacatcaagttttgttattggtgtgt 6756906  T
Q  151 ttt 153  Q
    |||    
T  6756907 ttt 6756909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 20054152 - 20054266
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||  ||||||| ||||||||||| | ||||| ||||| |||    
T  20054152 ttttctacttttgt-ttgtgtttataactttcatacactttg-ttttggttgcttgattattacttgctctacacatcaagtattttattagtgtgattt 20054249  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| ||||||||||    
T  20054250 ttatcgaattcacaaca 20054266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 2724209 - 2724310
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||||| |    
T  2724209 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgat 2724307  T
Q  152 ttt 154  Q
    |||    
T  2724308 ttt 2724310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 6747566 - 6747725
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctcgtgttct-tctcgccgttgtttttctacttttggcttgtatttataacttt--catacacttt 95  Q
    |||||||||||||||||||||  | ||||||||  || | || | |||||| |||||||| | ||||||||||||| ||||||| | |  ||||||||||    
T  6747566 accgaactgggtcaacaaattcttttgtgttctcttcttcttttctctcgctgttgtttt-cgacttttggcttgtgtttataattgttccatacacttt 6747664  T
Q  96 gt--ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt 153  Q
    ||  ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  6747665 gtgtttttggttgcttgattatctcttgctctacacatcaagtttgttattggtgtgtttt 6747725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 21289075 - 21289176
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||| |  ||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||| |    
T  21289075 ttttctacttttggcttgtgtttattattcttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgat 21289173  T
Q  152 ttt 154  Q
    |||    
T  21289174 ttt 21289176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 40221845 - 40221946
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||| |    
T  40221845 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgactatcctttgctccacacatcaagtttgttattggtgtgat 40221943  T
Q  152 ttt 154  Q
    |||    
T  40221944 ttt 40221946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 26098249 - 26098153
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  26098249 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattattccttgctccacacatcaagtttgatattggtgtg 26098153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 24127172 - 24127292
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    ||||||||||||| ||| | ||||||| |  |||||||||||||||||| ||||  ||||||||||||||||||||||| ||| |||||||| ||||| |    
T  24127172 ttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcccttgctccacacattaagtttgttatttgtgtgat 24127271  T
Q  151 ttttgatcggattcacaacaa 171  Q
    |||| |||| |||||||||||    
T  24127272 ttttcatcgaattcacaacaa 24127292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 39854791 - 39854921
Alignment:
Q  43 tctcgccgttgtttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgt 139  Q
    |||||| ||||||||| |||||||||||||| ||||||| | |  |||||||||| ||||||||||||| | |||||||||||||||| |||||| || |    
T  39854791 tctcgctgttgttttt-tacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgctccacatatcaagtttat 39854889  T
Q  140 tattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||| ||||| |||| |||| |||||    
T  39854890 tattggtgtgatttttcatcgaattcgcaaca 39854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 1189570 - 1189454
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  |||||| |||||||| ||| |||||||||| ||||||||||||||||||| ||| |||||||||| |    
T  1189570 ttttctacttttggcttgtgtttataattgttccatacattttgtttt-ggtggcttgattattccttgctccacacatcaagtttgatattggtgtg-t 1189473  T
Q  152 tttgatcggattcacaaca 170  Q
    ||| |||| ||||||||||    
T  1189472 tttcatcgaattcacaaca 1189454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 6661151 - 6661038
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    ||||||||||||| ||||| |||||||||| |||||||||| |||| ||||||||||||||  ||||||||||||||||| | | | ||||||||| |||    
T  6661151 ttttctacttttg-cttgtgtttataacttccatacactttatttt-ggttgcttgattattacttgctccacacatcaaatatttaattggtgtgattt 6661054  T
Q  154 tgatcggattcacaac 169  Q
    | |||| |||||||||    
T  6661053 tcatcgaattcacaac 6661038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 16776477 - 16776577
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||| | |||| ||||||| ||||||||||||||||||| |||||||||||||| |    
T  16776477 ttttctacttttggcttgtatt-ataattgtttcatacactttgtttt-gattgcctgattattccttgctccacacatcaagtttgttattggtgtgat 16776574  T
Q  152 ttt 154  Q
    |||    
T  16776575 ttt 16776577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 18511174 - 18511053
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||| |||||| ||||||| |  ||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||| |||| |    
T  18511174 ttttctactttttgcttgtgtttataattgtttcatacactttgttttag-ttgcttgactatcccttgctccacacatcaagtttgttattgatgtgat 18511076  T
Q  151 ttttgatcggattcacaacaatt 173  Q
    || | |||| |||| ||||||||    
T  18511075 ttatcatcgaattcgcaacaatt 18511053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 31465952 - 31465850
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||| |||||||||||| ||||| ||||| |||||||||| || |||||||||||||| |    
T  31465952 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgttattggtgtgat 31465853  T
Q  152 ttt 154  Q
    |||    
T  31465852 ttt 31465850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 6745386 - 6745510
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgttttt--ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||| ||||||||||||| ||||||| | |  ||||||||||||||||  || ||||||| |||| |||||||||||||||||| ||||||||||||||    
T  6745386 ttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctcttgctccacacatcaagtttgttattggtgtg 6745485  T
Q  150 tttt-tgatcggattcacaacaatt 173  Q
    |||| | |||| |||| ||||||||    
T  6745486 ttttctcatcgaattcgcaacaatt 6745510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 12555876 - 12555780
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtg 149  Q
    |||||||||||||||||||  |||||| |  |||||||||||| |||| |||||||||||||| |||||||||||||||| || ||||||||||||||    
T  12555876 ttttctacttttggcttgtgattataattgtttcatacactttatttt-ggttgcttgattattccttgctccacacatcaaatttgttattggtgtg 12555780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 20505808 - 20505684
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttg--tttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 149  Q
    ||||||| ||||||||||| ||||||| | |  |||||||||||  ||||||||||| |||||||  |||||||||||||||||| ||||||||||||||    
T  20505808 ttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattggtgtg 20505709  T
Q  150 tttt-tgatcggattcacaacaatt 173  Q
    |||| | || | |||||||||||||    
T  20505708 ttttctcattgaattcacaacaatt 20505684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 18509280 - 18509201
Alignment:
Q  55 ttttctacttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatca 133  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  18509280 ttttctacttttggcttgtgtttataattgtttcatacactttgtttt-ggttgtttgactatcccttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 34530674 - 34530559
Alignment:
Q  58 tctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttt 153  Q
    |||||||||| ||||| ||||||| | |  ||||| ||||||||| ||||||||||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  34530674 tctacttttgacttgtgtttataattgttccatacgctttgtttt-ggttgcttgattatcacttgctcgacacatcaagtttgttattggtgtgatttt 34530576  T
Q  154 tgatcggattcacaaca 170  Q
    | |||| ||||||||||    
T  34530575 tcatcgaattcacaaca 34530559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 36208889 - 36209009
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-t 150  Q
    |||||||||||||||||||  |||||| | ||| |||||||||||||| ||||||||||||||| ||||||| |||||||||| || |||||| |||| |    
T  36208889 ttttctacttttggcttgtgattataattgttctatacactttgtttt-ggttgcttgattatcacttgctctacacatcaagtttattattgatgtgat 36208987  T
Q  151 ttttgatcggattcacaacaat 172  Q
    |||| |||| ||||||||||||    
T  36208988 ttttcatcgaattcacaacaat 36209009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 37705745 - 37705644
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||| ||| | |  |||| |||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||||| |    
T  37705745 ttttctacttttggcttgtgtttttaattattccatatactttgtttt-ggttgcttggttattccttgctccacacatcaagtttgttattggtgtggt 37705647  T
Q  152 ttt 154  Q
    |||    
T  37705646 ttt 37705644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 26098047 - 26098127
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||||| || ||||||| | |  ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  26098047 ttttctacttttggctagtgtttataattgttccatacactttgtttt-ggttgcttgactatcccttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 20045297 - 20045395
Alignment:
Q  49 cgttgtttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattgg 145  Q
    |||||||||| |||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||||  ||||| ||||||||||| ||||||||||    
T  20045297 cgttgttttt-tacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcatttgcttcacacatcaagtttgttattgg 20045394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 10474285 - 10474203
Alignment:
Q  56 tttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagtt 137  Q
    ||||||||||| |||||| ||||||| | |  ||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttgtttt-ggttacttgattattccttgctccacacatcaagtt 10474203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 658286 - 658204
Alignment:
Q  88 tacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||| || |||||||||||||| |||| |||| |||| |||||    
T  658286 tacactttgtttt-ggttgcctgattattccttgctccacacatcaaatttgttattggtgtgattttcatcgaattcgcaaca 658204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 20043305 - 20043406
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttga-ttatcccttgctccacacatcaag-ttgttattggtgtgt 150  Q
    ||||||||||||||||||| |||||||   || ||||||||||| |||||| ||||||| ||||| ||||||||||| |||||| ||||||||| |||||    
T  20043305 ttttctacttttggcttgtgtttataattgttccatacactttg-ttttggctgcttgatttatcacttgctccacaaatcaagtttgttattgatgtgt 20043403  T
Q  151 ttt 153  Q
    |||    
T  20043404 ttt 20043406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 17073203 - 17073322
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||||||| | ||||||||| ||| ||||||||||||||| || || |||||||||| ||    
T  17073203 ttttctacttttgacttgtgtttataattgttccatacactttgttttag-ttgcttgatcatcacttgctccacacatcaaatttattattggtgtatt 17073301  T
Q  152 tt-tgatcggattcacaacaa 171  Q
    ||  ||||| |||||||||||    
T  17073302 ttcggatcgaattcacaacaa 17073322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 145
Target Start/End: Original strand, 23667624 - 23667733
Alignment:
Q  37 tgttcttctcgccgttgtt-tttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||| | |||||| ||||||||||||||| |||||||    || ||||| |||||  ||||||||||| | ||||||| || ||||||||||||    
T  23667624 tgttcttctcacagttgttctttctacttttggctcgtatttaatcattccatacgctttgagtttggttgcttaactatccctcgccccacacatcaag 23667723  T
Q  136 ttgttattgg 145  Q
    |||| |||||    
T  23667724 ttgtgattgg 23667733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 696191 - 696284
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggt 146  Q
    |||||||||||||  |||| ||||||||| |  |||||||||| |||| | || |||||||||| ||||||||||||||||||| ||||||||||    
T  696191 ttttctacttttgt-ttgtgtttataactgttccatacactttattttggttttcttgattatctcttgctccacacatcaagtctgttattggt 696284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 154
Target Start/End: Complemental strand, 15445232 - 15445135
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    |||||||  ||| |||||| ||||||| |||||| ||| ||||||| | ||||||||||||   |||||||||||||||||| | |||||||||||||||    
T  15445232 ttttctatcttttgcttgtgtttataattttcatccacgttgtttt-gattgcttgattatt--ttgctccacacatcaagtattttattggtgtgtttt 15445136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 16092118 - 16092045
Alignment:
Q  99 tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttt-tgatcggattcacaaca 170  Q
    ||||||||||||| ||||| |||||||||| |||||| |||||||||||| ||||| | |||| ||||||||||    
T  16092118 tttggttgcttgactatccattgctccacatatcaagtttgttattggtgcgttttctcatcgaattcacaaca 16092045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 2954764 - 2954831
Alignment:
Q  86 catacactttgtttttggttgcttgattatcccttgctccacacatc-aagttgttattggtgtgtttt 153  Q
    ||||||||||||||| |||||  |||||||| ||| ||||||||||| || ||||||||||||||||||    
T  2954764 catacactttgtttt-ggttgtctgattatcacttactccacacatcaaatttgttattggtgtgtttt 2954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 18596961 - 18597062
Alignment:
Q  55 ttttctacttttggcttgtatttataa--ctttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| |||||||   || ||||||||||  |||||| ||  |||||||| ||||||||| |||||||| |||||||||||||| |    
T  18596961 ttttctacttttgacttgtgtttataattgttccatacacttt-attttggatgtctgattatcacttgctccatacatcaagtttgttattggtgtgat 18597059  T
Q  152 ttt 154  Q
    |||    
T  18597060 ttt 18597062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 25904419 - 25904499
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||| |||| ||||||| | |  |||||||||||||||   |||||||| |||||||||| |||||||||||    
T  25904419 ttttctacttttggtttgtgtttataattgttccatacactttgttttca-ttgcttgactatcccttgcaccacacatcaa 25904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 9020536 - 9020649
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttt 153  Q
    ||||||||||||| ||||| ||||||||||  ||||||||| |||  ||||||||||||||   |||||||||| ||||| | | ||||| ||||| |||    
T  9020536 ttttctacttttg-cttgtgtttataacttcaatacactttattt--ggttgcttgattattaattgctccacagatcaaatattttattcgtgtgattt 9020632  T
Q  154 tgatcggattcacaaca 170  Q
    | || | ||||||||||    
T  9020633 tcattgaattcacaaca 9020649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 12845 - 12712
Alignment:
Q  39 ttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttg 138  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12845 ttcttctcgccgttgttgt-ctacttttggcttgtatttataactttcatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttg 12748  T
Q  139 ttattggtgt-gtttttgatcggattcacaacaatt 173  Q
    ||||||||||  ||||| |||| |||||||||||||    
T  12747 ttattggtgtcatttttcatcgaattcacaacaatt 12712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 69309 - 69126
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||     
T  69309 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttataacttccatacat 69211  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtttttgatcggattcacaacaattatca 177  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||||||| ||||||    
T  69210 tttg-ttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttcatcgaattcacaacagttatca 69126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 3193 - 3322
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttgg-cttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaa 134  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  3193 gtgttcttctcgccgttgtttt-ctactttttgacttgtatttataactttcatacactttgttt--ggttgcttgattatcccttgctccacacatcaa 3289  T
Q  135 gttgttattggtgtgtttttgatcggattcaca 167  Q
    ||||||||||||||| |||| |||| |||||||    
T  3290 gttgttattggtgtgattttcatcgaattcaca 3322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 338 - 451
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||||||||||||||||||||||||    || ||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  338 gtgttcttctcgccgttgtttttctacttttggcttgtatttaattgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag 437  T
Q  136 ttgttattggtgtg 149  Q
    ||||||||||||||    
T  438 ttgttattggtgtg 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 6505 - 6647
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccac 127  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||||||| | || ||||| ||||| |||||||||||| |||||||||||||||||    
T  6505 ttcttcttttgttcttctcgccgttgtttt-ctacttttggcttgtatttatta-ttccatacgctttgattttggttgcttaattatcccttgctccac 6602  T
Q  128 acatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||    
T  6603 acatcaagttgttattggtgtgatttttcatcgaattcacaacaa 6647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 1470 - 1310
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||| |||||||||||||||||||||||||||||||||||||||    || |||||||    
T  1470 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgatcttctcgccgttgtttttctacttttggcttgtatttaattgttacatacac 1371  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  1370 tttgtttt-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtgatttt 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 41500 - 41324
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||| ||||||||||||| ||||||||||||||||||||    || |||||||    
T  41500 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttttcgccgttgtttt-ctacttttggcttgtatttaattgttccatacac 41402  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaa 171  Q
    |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  41401 tttgtttt-gattgcttgattatctcttgctccacacatcaagttgttattggtgtgattttcatcgaattcacaacaa 41324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 14347 - 14230
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttt 152  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14347 ttttctacttttggcttgtgtttataattgttccatacactttgtttt-ggttgcttgattatcccttgctccacacatcaagttgttattggtgtgatt 14249  T
Q  153 ttgatcggattcacaacaa 171  Q
    || |||| |||||||||||    
T  14248 ttcatcgaattcacaacaa 14230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29441 - 29616
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      ||||||||||| |||||||||| ||||||||||||| ||||||    || |||||||    
T  29441 accgaactgggtcaacaaattcgtttgtgttcttctcttttttgtgttcttctctccgttgtttt-ctacttttggcttttatttaattgttccatacac 29539  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaaca 170  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||    
T  29540 tttgtttt-gattgcttgattatcccttgctccacacatcaagttgttattggtgtgattttcatcgaattcgcaaca 29616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 50289 - 50460
Alignment:
Q  5 aactgggtcaacaaatttctgtgttcttctcgtgttcttctcgc-cgttgtttttctacttttggcttgtatttataa--ctttcatacactttgttttt 101  Q
    |||||||||||||||||  |||||||||||| | || ||||| |  |||| ||||||||||||||||||| |||||||   |||||||||||||| ||||    
T  50289 aactgggtcaacaaattcttgtgttcttctcttctttttctctctagttg-ttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 50386  T
Q  102 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||||    
T  50387 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaatt 50460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 52288 - 52456
Alignment:
Q  5 aactgggtcaacaaatttctgtgttcttctcgtgttcttctcgc-cgttgtttttctacttttggcttgtatttataa--ctttcatacactttgttttt 101  Q
    |||||||||||||||||  |||||||||||| | || ||||| |  |||| ||||||||||||||||||| |||||||   |||||||||||||| ||||    
T  52288 aactgggtcaacaaattcttgtgttcttctcttctttttctctctagttg-ttttctacttttggcttgtgtttataattgtttcatacactttg-tttt 52385  T
Q  102 ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg-tttttgatcggattcacaaca 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||    
T  52386 ggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaaca 52456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 183658 - 183504
Alignment:
Q  1 accgaactgggtcaacaaatt--tctgtgttcttctc------gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacac 92  Q
    |||||||||||||||||||||  | ||||||||||||      |||||||||||||||||||||| ||||||||||||||||||||    || ||||||     
T  183658 accgaactgggtcaacaaattcttttgtgttcttctcttctttgtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacat 183560  T
Q  93 tttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  183559 tttgtttc-ggttgcttgattatctcttgctccacacatcaagttgttattggtgtg 183504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 1425 - 1289
Alignment:
Q  36 gtgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag 135  Q
    |||||||||||||||||||||| ||||||||||||||||||||    || ||||||||||||||| |||||||||||||||  || ||||||||||||||    
T  1425 gtgttcttctcgccgttgtttt-ctacttttggcttgtatttaattgttccatacactttgtttt-ggttgcttgattatctttttctccacacatcaag 1328  T
Q  136 ttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    |||||||||||||| ||||| |||| |||||||| ||||    
T  1327 ttgttattggtgtgatttttcatcgaattcacaaaaatt 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 24696 - 24840
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||||| ||||| |||||||||||| ||||||||||||||||    
T  24696 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatacgctttgattttggttgcttaattatcccttgctcca 24794  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaacaa 171  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||    
T  24795 cacatcaagttgttattggtgtgatttttcgtcgaattcacaacaa 24840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 173
Target Start/End: Original strand, 22421 - 22567
Alignment:
Q  28 ttcttctcgtgttcttctcgccgttgtttttctacttttggcttgtattt-ataactttcatacactttgtttttggttgcttgattatcccttgctcca 126  Q
    |||||||  |||||||||| | ||||||||||||||||||||| |||||| || | || ||| | ||||| |||||||||||| ||||||||||||||||    
T  22421 ttcttcttttgttcttctcacagttgtttttctacttttggctcgtattttatta-ttccatgcgctttgattttggttgcttaattatcccttgctcca 22519  T
Q  127 cacatcaagttgttattggtgtg-tttttgatcggattcacaacaatt 173  Q
    ||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  22520 cacatcaagttgttattggtgtgatttttcgtcgaattcacaacaatt 22567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 1606 - 1490
Alignment:
Q  55 ttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||  ||||||||||||||||| |  ||||||||||| ||||    
T  1606 ttttctacttttggcttgtgtttataacttccatacactttgttt--ggttgcttgattattacttgctccacacatcaaatatttattggtgtgatttt 1509  T
Q  155 gatcggattcacaacaatt 173  Q
     || | |||||||||||||    
T  1508 cattgaattcacaacaatt 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 4650 - 4516
Alignment:
Q  37 tgttcttctcgccgttgtttttctacttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt 136  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    || ||||| |||||  ||| |||||||||||||||||| ||||||||||||| |    
T  4650 tgttcttctcgccattgtttt-ctacttttggcttgtatttaattgttccatacgctttgacttt-gttgcttgattatcccttactccacacatcaaat 4553  T
Q  137 tgttattggtgtg-tttttgatcggattcacaacaat 172  Q
    ||||||||||||| |||| |||| |||||||||||||    
T  4552 tgttattggtgtgattttggatcagattcacaacaat 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 35928 - 36016
Alignment:
Q  63 ttttggcttgtatttataact--ttcatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgt 148  Q
    ||||||||||| ||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  35928 ttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgt 36016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 80186 - 80308
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| |||  ||||||||||| |||| ||||| |||||||  |||||||||||||||||| ||||||||||||||||    
T  80186 ttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctccacacatcaagtttgttattggtgtgtt 80285  T
Q  152 tt-tgatcggattcacaacaatt 173  Q
    || | |||| |||| ||||||||    
T  80286 ttctcatcgaattcgcaacaatt 80308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 79512 - 79614
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    |||||||||||||||||||  |||||| | |  ||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||| |    
T  79512 ttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtttgttattggtgtgat 79611  T
Q  152 ttt 154  Q
    |||    
T  79612 ttt 79614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 85554 - 85656
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||| ||||| ||||||| | |  ||||||||||| ||||||||| ||||||||| |||||||||||||| ||| |||||||||||||| |    
T  85554 ttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctccacacattaagattgttattggtgtgat 85653  T
Q  152 ttt 154  Q
    |||    
T  85654 ttt 85656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 11434 - 11337
Alignment:
Q  55 ttttctacttttggcttgtatttataacttt--catacactttgtttttg-gttgcttgattatcccttgctccacacatcaagttgttattggtgtg 149  Q
    |||||||||||||||||||  |||||| | |  |||||||||| |||||  ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  11434 ttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttactccacacatcaagttgttattggtgtg 11337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 4319 - 4419
Alignment:
Q  55 ttttctacttttggcttgtatttataact-ttc-atacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgtt 151  Q
    ||||||||||||||||||| ||||||| | ||| ||||||||  |||| | ||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  4319 ttttctacttttggcttgtgtttataattattctatacacttcatttt-gattgcttgattatcccttactccacacatcaagtttgttattgatgtgtt 4417  T
Q  152 tt 153  Q
    ||    
T  4418 tt 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 63 - 170
Target Start/End: Complemental strand, 16607 - 16501
Alignment:
Q  63 ttttggcttgtatttataactttcatacactttgtttttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgtttttgatcgga 161  Q
    |||| ||||||||||||||||| ||| ||||||||||   |||||||||||||  ||||||||||||||||||| | |||||||| |  |||| |||| |    
T  16607 tttttgcttgtatttataacttccatgcactttgttta--gttgcttgattattacttgctccacacatcaagtattttattggtataatttttatcgaa 16510  T
Q  162 ttcacaaca 170  Q
    |||||||||    
T  16509 ttcacaaca 16501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 1 - 45
Alignment:
Q  110 gattatcccttgctccacacatcaagttgttattggtgtgttttt 154  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||    
T  1 gattatctcttgctccacacatcaagttgttattggtgtgatttt 45  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 16605 - 16659
Alignment:
Q  119 ttgctccacacatcaagttgttattggtgtgtttttgatcggattcacaacaatt 173  Q
    ||||||||| ||||||||| ||||||||||| |||| |||| |||||||||||||    
T  16605 ttgctccacgcatcaagtttttattggtgtgattttcatcgaattcacaacaatt 16659  T

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