View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_87 (Length: 266)
Name: NF17063_low_87
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_87 |
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Alignment Details
Target: chr4 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 38148017 - 38148188
Alignment:
| Q |
18 |
tatgatgttaaatatttcaagttgcaataacaatactctttatgaggagaatacaagtctcccaaaagaggaagacttttgagtgatatttggcacatgg |
117 |
Q |
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| T |
38148017 |
tatgatgttaaatttttcaagttgcaataacaatactctttatgacgagaatacaagtctcccaaaagaagaagacttttgagtgatatttggcacatgg |
38148116 |
T |
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| Q |
118 |
cagcttcttctgattttgaactttcctgcaaatatagatggttgttagagaaaatcttttctgtttgttgcc |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
38148117 |
cagcttcttctgattttgaactttcctgcaaatatagatggttgttggagaaaatcttttctgtttgttgcc |
38148188 |
T |
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