View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17063_low_91 (Length: 257)
Name: NF17063_low_91
Description: NF17063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17063_low_91 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 245
Target Start/End: Complemental strand, 32209336 - 32209100
Alignment:
| Q |
9 |
agcatagggcaaggctttacataatatggagatgcactgttttactattatgctggaacgattaaaagtagtaagtattcaagagcttcaacaagaattt |
108 |
Q |
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| T |
32209336 |
agcagagggcaaggctttacataatatggagatgcactgttttactattatgctggaacgattaaaagtagtaagtattcaagagcttcaacaagaattt |
32209237 |
T |
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| Q |
109 |
gaggttctaactaacattatatttgaaagtggagatgaatatttgagacttgtattgtttgcaattgtatactcttccatgggaactttggggtgtgaaa |
208 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32209236 |
gaggttctaactaacattatatttgaaagaggagatgaatatttgagacttgtattgtttgcaattgtatactcttccatgggaactttggggtgtgaaa |
32209137 |
T |
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| Q |
209 |
ttattaacactcaaaagtgatgtagtttttgttattg |
245 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
32209136 |
ttattaacactcaaaagtgatgtagtttttgttattg |
32209100 |
T |
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