View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17064_high_2 (Length: 690)

Name: NF17064_high_2
Description: NF17064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17064_high_2
NF17064_high_2
[»] chr3 (72 HSPs)
chr3 (4-673)||(28876778-28877445)
chr3 (8-140)||(4019907-4020039)
chr3 (1-140)||(45664523-45664662)
chr3 (1-140)||(50520085-50520224)
chr3 (13-140)||(3457251-3457384)
chr3 (8-140)||(22844361-22844493)
chr3 (9-140)||(27831409-27831539)
chr3 (12-140)||(21803844-21803972)
chr3 (8-140)||(29776363-29776495)
chr3 (1-140)||(2598380-2598518)
chr3 (1-140)||(3088337-3088476)
chr3 (10-136)||(40365535-40365662)
chr3 (26-140)||(30293126-30293240)
chr3 (12-140)||(43029996-43030124)
chr3 (1-140)||(25939169-25939308)
chr3 (1-128)||(29182295-29182422)
chr3 (1-140)||(32089604-32089743)
chr3 (12-134)||(1165075-1165197)
chr3 (1-140)||(39340501-39340636)
chr3 (1-129)||(28994993-28995121)
chr3 (1-140)||(20200731-20200870)
chr3 (1-140)||(20202913-20203052)
chr3 (1-140)||(22286425-22286563)
chr3 (8-71)||(25373836-25373899)
chr3 (1-128)||(32237681-32237808)
chr3 (1-120)||(40797335-40797454)
chr3 (44-135)||(46926749-46926840)
chr3 (12-139)||(20251970-20252096)
chr3 (11-139)||(33076597-33076725)
chr3 (9-140)||(40461665-40461799)
chr3 (1-137)||(43839193-43839329)
chr3 (1-128)||(43243110-43243237)
chr3 (25-140)||(40012939-40013060)
chr3 (14-134)||(40883548-40883674)
chr3 (79-140)||(11846928-11846989)
chr3 (1-134)||(33977604-33977737)
chr3 (11-71)||(2148067-2148127)
chr3 (3-71)||(47587115-47587183)
chr3 (89-140)||(45047908-45047959)
chr3 (11-97)||(47914309-47914395)
chr3 (1-71)||(50460492-50460562)
chr3 (35-129)||(51742140-51742234)
chr3 (13-140)||(53155097-53155230)
chr3 (13-140)||(54706399-54706532)
chr3 (87-141)||(55446457-55446511)
chr3 (1-110)||(913019-913128)
chr3 (14-140)||(13701669-13701801)
chr3 (87-140)||(14585871-14585924)
chr3 (87-140)||(19645599-19645652)
chr3 (18-103)||(21084448-21084533)
chr3 (87-128)||(25084418-25084459)
chr3 (13-135)||(31270638-31270766)
chr3 (25-134)||(4082049-4082164)
chr3 (12-140)||(10977556-10977684)
chr3 (9-101)||(21586209-21586301)
chr3 (15-59)||(30156044-30156088)
chr3 (14-70)||(35175038-35175094)
chr3 (13-134)||(53402950-53403077)
chr3 (25-72)||(3961523-3961570)
chr3 (1-140)||(34767288-34767420)
chr3 (25-120)||(42106464-42106559)
chr3 (86-129)||(48053070-48053113)
chr3 (25-140)||(2192419-2192540)
chr3 (13-71)||(40702749-40702807)
chr3 (14-59)||(105801-105846)
chr3 (18-71)||(35175573-35175626)
chr3 (87-128)||(44984544-44984585)
chr3 (88-129)||(51256792-51256833)
chr3 (8-140)||(35670722-35670854)
chr3 (3-128)||(37051898-37052027)
chr3 (29-69)||(47176031-47176071)
chr3 (87-140)||(47587043-47587092)
[»] chr8 (82 HSPs)
chr8 (1-140)||(5989915-5990054)
chr8 (1-139)||(16937946-16938084)
chr8 (1-140)||(5328251-5328388)
chr8 (1-140)||(9799684-9799823)
chr8 (1-140)||(41996845-41996984)
chr8 (3-128)||(1215026-1215151)
chr8 (8-140)||(15665850-15665982)
chr8 (1-140)||(17019402-17019541)
chr8 (1-140)||(17549839-17549978)
chr8 (1-135)||(12243894-12244028)
chr8 (1-140)||(9992968-9993107)
chr8 (1-140)||(16937012-16937151)
chr8 (1-140)||(32104510-32104649)
chr8 (3-132)||(32062098-32062227)
chr8 (8-140)||(18994191-18994322)
chr8 (27-140)||(13977738-13977851)
chr8 (3-124)||(27534101-27534222)
chr8 (12-139)||(36545456-36545582)
chr8 (4-140)||(7280802-7280938)
chr8 (1-129)||(37720142-37720269)
chr8 (12-140)||(44295629-44295757)
chr8 (1-140)||(2629212-2629354)
chr8 (1-140)||(12248384-12248523)
chr8 (15-135)||(13575881-13576007)
chr8 (13-128)||(18196831-18196946)
chr8 (17-140)||(26538702-26538825)
chr8 (6-140)||(15237213-15237347)
chr8 (13-140)||(24790837-24790968)
chr8 (3-128)||(31147514-31147637)
chr8 (11-140)||(5457383-5457512)
chr8 (3-128)||(18190536-18190661)
chr8 (11-140)||(32413102-32413231)
chr8 (8-120)||(10043080-10043191)
chr8 (8-56)||(14918426-14918474)
chr8 (1-140)||(3925364-3925502)
chr8 (14-120)||(23970875-23970982)
chr8 (10-120)||(7269159-7269269)
chr8 (13-139)||(11298436-11298562)
chr8 (25-140)||(31712747-31712864)
chr8 (13-71)||(44410525-44410583)
chr8 (15-134)||(2024897-2025022)
chr8 (15-72)||(10952037-10952094)
chr8 (15-72)||(10960042-10960099)
chr8 (14-140)||(37612966-37613098)
chr8 (59-140)||(37659220-37659301)
chr8 (88-140)||(13570434-13570486)
chr8 (8-128)||(14530601-14530721)
chr8 (14-140)||(31202779-31202910)
chr8 (1-52)||(5917510-5917561)
chr8 (1-140)||(8054481-8054620)
chr8 (1-128)||(9270323-9270449)
chr8 (14-134)||(10148266-10148392)
chr8 (15-140)||(30026549-30026680)
chr8 (14-134)||(32778645-32778771)
chr8 (3-118)||(32920948-32921063)
chr8 (13-72)||(34365880-34365939)
chr8 (25-140)||(41362073-41362195)
chr8 (25-134)||(23767065-23767174)
chr8 (14-140)||(14600365-14600497)
chr8 (14-140)||(28296782-28296914)
chr8 (15-59)||(11162217-11162261)
chr8 (1-129)||(16809165-16809292)
chr8 (88-140)||(26673449-26673501)
chr8 (13-140)||(45310903-45311029)
chr8 (13-140)||(5526131-5526264)
chr8 (87-141)||(9501977-9502031)
chr8 (25-71)||(10632874-10632920)
chr8 (90-140)||(15286699-15286749)
chr8 (90-140)||(15467068-15467118)
chr8 (25-140)||(43936847-43936968)
chr8 (102-139)||(2120554-2120591)
chr8 (95-140)||(7579522-7579567)
chr8 (14-59)||(10338585-10338630)
chr8 (12-53)||(31874393-31874434)
chr8 (95-140)||(38545483-38545528)
chr8 (104-140)||(5917473-5917509)
chr8 (15-59)||(12329958-12330002)
chr8 (23-71)||(12964183-12964231)
chr8 (102-138)||(14544678-14544714)
chr8 (8-120)||(32256414-32256526)
chr8 (104-140)||(33526796-33526832)
chr8 (88-140)||(39067357-39067409)
[»] chr6 (46 HSPs)
chr6 (1-140)||(8644530-8644669)
chr6 (1-140)||(20496495-20496634)
chr6 (1-134)||(31748259-31748392)
chr6 (12-140)||(548545-548673)
chr6 (13-140)||(4921567-4921694)
chr6 (1-134)||(4663499-4663632)
chr6 (1-140)||(5416898-5417036)
chr6 (1-134)||(8632875-8633008)
chr6 (2-140)||(904571-904709)
chr6 (13-134)||(13233787-13233908)
chr6 (11-140)||(23843097-23843226)
chr6 (3-128)||(34020907-34021032)
chr6 (1-140)||(10744884-10745023)
chr6 (1-135)||(11426247-11426381)
chr6 (11-136)||(19760100-19760225)
chr6 (3-132)||(33541212-33541341)
chr6 (1-140)||(12576154-12576293)
chr6 (13-140)||(12653977-12654110)
chr6 (9-140)||(31804526-31804655)
chr6 (14-140)||(8693330-8693462)
chr6 (1-140)||(15127802-15127942)
chr6 (16-124)||(22530515-22530623)
chr6 (1-59)||(32804597-32804655)
chr6 (87-140)||(31705574-31705627)
chr6 (26-70)||(3359086-3359130)
chr6 (84-140)||(5545065-5545121)
chr6 (11-59)||(20845320-20845368)
chr6 (15-59)||(29920663-29920707)
chr6 (89-140)||(2488533-2488584)
chr6 (1-52)||(7049547-7049598)
chr6 (1-72)||(12651942-12652013)
chr6 (13-59)||(4660757-4660803)
chr6 (25-71)||(6127858-6127904)
chr6 (13-59)||(23101154-23101200)
chr6 (34-128)||(23588021-23588115)
chr6 (25-140)||(30813398-30813519)
chr6 (88-141)||(2304496-2304549)
chr6 (95-140)||(5527307-5527352)
chr6 (87-140)||(6295908-6295961)
chr6 (87-140)||(6302718-6302771)
chr6 (98-135)||(9043794-9043831)
chr6 (14-71)||(28943579-28943636)
chr6 (102-139)||(34185495-34185532)
chr6 (20-56)||(7076845-7076881)
chr6 (25-93)||(13871338-13871405)
chr6 (1-53)||(16913627-16913679)
[»] chr2 (83 HSPs)
chr2 (1-140)||(25622717-25622856)
chr2 (1-140)||(11931174-11931313)
chr2 (1-140)||(19953840-19953979)
chr2 (1-140)||(13268874-13269013)
chr2 (1-140)||(37883955-37884094)
chr2 (1-141)||(12366170-12366310)
chr2 (1-128)||(6090191-6090318)
chr2 (1-140)||(16720521-16720660)
chr2 (9-140)||(44441689-44441820)
chr2 (2-136)||(9715221-9715355)
chr2 (1-122)||(15673660-15673780)
chr2 (13-140)||(15920188-15920315)
chr2 (1-140)||(34480267-34480406)
chr2 (1-140)||(43567175-43567313)
chr2 (25-139)||(5071044-5071158)
chr2 (1-135)||(26491603-26491737)
chr2 (3-128)||(3397664-3397789)
chr2 (79-140)||(11550339-11550400)
chr2 (14-140)||(11798197-11798328)
chr2 (12-140)||(3390736-3390864)
chr2 (12-140)||(25771758-25771886)
chr2 (12-140)||(27023812-27023940)
chr2 (8-128)||(35353949-35354069)
chr2 (1-140)||(18141154-18141293)
chr2 (1-140)||(25237004-25237143)
chr2 (1-140)||(28228524-28228663)
chr2 (1-140)||(41177160-41177299)
chr2 (25-140)||(12705027-12705148)
chr2 (1-59)||(17118568-17118626)
chr2 (13-140)||(33012377-33012510)
chr2 (11-128)||(3465241-3465358)
chr2 (15-124)||(10589411-10589520)
chr2 (25-134)||(12183015-12183120)
chr2 (1-129)||(43928984-43929112)
chr2 (25-140)||(9207029-9207144)
chr2 (25-140)||(4878407-4878524)
chr2 (9-59)||(17056223-17056273)
chr2 (9-59)||(17068670-17068720)
chr2 (9-59)||(17095240-17095290)
chr2 (25-128)||(34471301-34471406)
chr2 (1-134)||(3603287-3603420)
chr2 (15-141)||(4739660-4739792)
chr2 (26-140)||(10286673-10286793)
chr2 (1-137)||(5930725-5930861)
chr2 (15-140)||(29543124-29543255)
chr2 (15-140)||(31908476-31908607)
chr2 (19-129)||(31268789-31268899)
chr2 (13-140)||(20560792-20560925)
chr2 (13-140)||(36868337-36868470)
chr2 (15-93)||(45693822-45693900)
chr2 (3-132)||(2251029-2251157)
chr2 (14-140)||(12890776-12890908)
chr2 (25-140)||(23256304-23256418)
chr2 (14-140)||(44942616-44942748)
chr2 (89-141)||(4603974-4604026)
chr2 (96-140)||(7581766-7581810)
chr2 (1-140)||(40125689-40125826)
chr2 (14-134)||(28261570-28261696)
chr2 (89-140)||(34962654-34962705)
chr2 (89-140)||(43696279-43696330)
chr2 (1-140)||(44167385-44167523)
chr2 (15-93)||(20570289-20570367)
chr2 (1-135)||(27191011-27191145)
chr2 (1-135)||(27840825-27840959)
chr2 (13-128)||(33852213-33852332)
chr2 (102-136)||(43711791-43711825)
chr2 (107-140)||(7640002-7640035)
chr2 (102-139)||(12553971-12554008)
chr2 (107-140)||(15750179-15750212)
chr2 (25-70)||(19904834-19904879)
chr2 (14-59)||(27096019-27096064)
chr2 (26-59)||(29938613-29938646)
chr2 (25-70)||(33839132-33839177)
chr2 (87-123)||(4615333-4615369)
chr2 (15-59)||(7072720-7072764)
chr2 (13-69)||(8064531-8064587)
chr2 (87-135)||(15439881-15439929)
chr2 (112-140)||(17055971-17055999)
chr2 (112-140)||(17068418-17068446)
chr2 (112-140)||(17074401-17074429)
chr2 (11-59)||(17074653-17074701)
chr2 (1-53)||(25516794-25516846)
chr2 (48-140)||(39481196-39481288)
[»] chr7 (81 HSPs)
chr7 (1-139)||(772745-772883)
chr7 (3-140)||(35141336-35141473)
chr7 (1-139)||(8319617-8319755)
chr7 (8-140)||(46918708-46918840)
chr7 (1-140)||(28015659-28015798)
chr7 (1-140)||(30992497-30992635)
chr7 (9-135)||(35362786-35362911)
chr7 (1-140)||(34893409-34893548)
chr7 (1-140)||(49167227-49167366)
chr7 (50-140)||(15123676-15123766)
chr7 (1-135)||(38649036-38649170)
chr7 (11-140)||(18754007-18754136)
chr7 (3-128)||(29804364-29804489)
chr7 (11-140)||(37399910-37400039)
chr7 (1-113)||(36350469-36350581)
chr7 (9-140)||(35134875-35135005)
chr7 (13-140)||(4621039-4621172)
chr7 (11-140)||(24470716-24470846)
chr7 (11-140)||(24475664-24475794)
chr7 (11-140)||(7986204-7986333)
chr7 (1-134)||(11002145-11002278)
chr7 (11-140)||(47156697-47156826)
chr7 (13-141)||(17508862-17508996)
chr7 (13-141)||(17544218-17544352)
chr7 (1-140)||(23732067-23732205)
chr7 (1-140)||(26017331-26017470)
chr7 (13-140)||(37375715-37375847)
chr7 (1-140)||(39090390-39090529)
chr7 (11-134)||(42491015-42491137)
chr7 (1-128)||(47750036-47750163)
chr7 (3-128)||(21328983-21329108)
chr7 (12-135)||(25854890-25855012)
chr7 (9-138)||(37890165-37890294)
chr7 (12-140)||(40775580-40775705)
chr7 (25-140)||(43806823-43806938)
chr7 (13-140)||(10574693-10574827)
chr7 (10-137)||(33530151-33530278)
chr7 (1-111)||(5024758-5024868)
chr7 (15-141)||(45482386-45482515)
chr7 (14-71)||(9137271-9137328)
chr7 (14-140)||(21990992-21991124)
chr7 (14-140)||(24319882-24320014)
chr7 (14-140)||(37593413-37593545)
chr7 (13-141)||(17473419-17473553)
chr7 (13-141)||(17579661-17579795)
chr7 (89-140)||(27535838-27535889)
chr7 (1-120)||(43483890-43484009)
chr7 (89-140)||(43847384-43847435)
chr7 (9-72)||(44681770-44681833)
chr7 (13-59)||(6667724-6667770)
chr7 (12-134)||(19895363-19895485)
chr7 (30-140)||(26161301-26161416)
chr7 (13-71)||(28314355-28314413)
chr7 (25-71)||(38273230-38273276)
chr7 (14-140)||(10094770-10094902)
chr7 (3-128)||(21552140-21552265)
chr7 (14-59)||(27535758-27535803)
chr7 (18-59)||(36253264-36253305)
chr7 (11-140)||(40477019-40477148)
chr7 (15-140)||(11833349-11833480)
chr7 (87-135)||(21603867-21603915)
chr7 (15-140)||(32741074-32741205)
chr7 (18-72)||(2622926-2622980)
chr7 (25-71)||(14762358-14762404)
chr7 (9-59)||(32944188-32944238)
chr7 (16-118)||(34594217-34594319)
chr7 (101-139)||(34899408-34899446)
chr7 (25-71)||(36719295-36719341)
chr7 (13-59)||(46025801-46025847)
chr7 (87-140)||(5238343-5238396)
chr7 (102-139)||(21609453-21609490)
chr7 (87-140)||(24533558-24533611)
chr7 (95-140)||(32312917-32312962)
chr7 (100-140)||(9137814-9137854)
chr7 (3-59)||(14733819-14733875)
chr7 (44-135)||(14810828-14810919)
chr7 (44-135)||(15257823-15257914)
chr7 (20-72)||(25308685-25308737)
chr7 (105-141)||(26771186-26771222)
chr7 (88-140)||(32083623-32083675)
chr7 (15-59)||(39532721-39532765)
[»] chr1 (70 HSPs)
chr1 (2-140)||(34659314-34659452)
chr1 (1-140)||(26771408-26771547)
chr1 (1-135)||(12147726-12147860)
chr1 (8-140)||(13969313-13969445)
chr1 (1-140)||(8893594-8893733)
chr1 (1-140)||(33177271-33177410)
chr1 (9-140)||(46589458-46589589)
chr1 (1-140)||(23257390-23257529)
chr1 (1-128)||(29067349-29067476)
chr1 (1-140)||(38644470-38644609)
chr1 (2-140)||(27469381-27469519)
chr1 (11-140)||(38646896-38647025)
chr1 (3-127)||(2350926-2351049)
chr1 (12-140)||(6212587-6212715)
chr1 (9-136)||(22031779-22031906)
chr1 (1-140)||(10877649-10877788)
chr1 (1-140)||(15276119-15276258)
chr1 (11-141)||(630456-630586)
chr1 (14-140)||(11121291-11121417)
chr1 (11-140)||(30853620-30853748)
chr1 (3-128)||(34566985-34567110)
chr1 (1-134)||(36621653-36621786)
chr1 (1-140)||(47392438-47392575)
chr1 (25-140)||(900378-900492)
chr1 (25-140)||(18343944-18344059)
chr1 (1-140)||(44513675-44513814)
chr1 (14-125)||(37662671-37662778)
chr1 (1-134)||(52839832-52839965)
chr1 (1-140)||(12967406-12967545)
chr1 (1-136)||(45659316-45659451)
chr1 (11-141)||(5844443-5844573)
chr1 (25-140)||(22344585-22344700)
chr1 (14-93)||(29726309-29726388)
chr1 (25-140)||(44562422-44562537)
chr1 (25-140)||(49652161-49652276)
chr1 (14-140)||(9298090-9298222)
chr1 (3-128)||(13691448-13691573)
chr1 (1-129)||(40992600-40992728)
chr1 (14-93)||(7995289-7995368)
chr1 (14-93)||(45193340-45193419)
chr1 (25-140)||(4882036-4882156)
chr1 (25-140)||(28677798-28677919)
chr1 (13-140)||(29205597-29205730)
chr1 (25-71)||(48003538-48003584)
chr1 (14-134)||(42491202-42491325)
chr1 (104-140)||(171531-171567)
chr1 (24-72)||(10304903-10304951)
chr1 (25-61)||(15575832-15575868)
chr1 (87-135)||(25689517-25689565)
chr1 (4-140)||(28213358-28213494)
chr1 (14-57)||(424040-424083)
chr1 (13-71)||(17347906-17347962)
chr1 (24-71)||(32301663-32301710)
chr1 (13-59)||(3233100-3233146)
chr1 (13-59)||(20413112-20413158)
chr1 (14-72)||(40862567-40862625)
chr1 (15-93)||(47551411-47551489)
chr1 (87-141)||(51418393-51418447)
chr1 (3-40)||(171324-171361)
chr1 (44-128)||(7421087-7421169)
chr1 (95-140)||(12537936-12537981)
chr1 (79-140)||(15698578-15698639)
chr1 (87-140)||(25032762-25032815)
chr1 (87-128)||(32538890-32538931)
chr1 (28-93)||(32784423-32784488)
chr1 (99-140)||(43504218-43504259)
chr1 (14-59)||(45750808-45750853)
chr1 (25-69)||(16263041-16263085)
chr1 (25-69)||(16574834-16574878)
chr1 (96-140)||(28666476-28666520)
[»] chr5 (72 HSPs)
chr5 (3-128)||(12524349-12524474)
chr5 (9-140)||(15710854-15710985)
chr5 (9-140)||(34866741-34866873)
chr5 (1-140)||(29154522-29154661)
chr5 (11-128)||(28501001-28501118)
chr5 (1-140)||(2415704-2415843)
chr5 (9-134)||(34874160-34874285)
chr5 (12-140)||(6886851-6886979)
chr5 (1-140)||(18472399-18472538)
chr5 (1-120)||(34844218-34844337)
chr5 (1-128)||(37219305-37219431)
chr5 (1-140)||(6647582-6647725)
chr5 (1-134)||(3495148-3495281)
chr5 (3-128)||(40564842-40564967)
chr5 (1-129)||(8811836-8811964)
chr5 (11-128)||(24288644-24288760)
chr5 (11-128)||(24373462-24373578)
chr5 (1-140)||(28618904-28619043)
chr5 (1-140)||(32387766-32387905)
chr5 (1-140)||(33486242-33486381)
chr5 (1-140)||(37425424-37425563)
chr5 (10-140)||(39308426-39308554)
chr5 (1-128)||(41554789-41554916)
chr5 (3-128)||(20145904-20146029)
chr5 (11-140)||(5378614-5378743)
chr5 (3-135)||(17325342-17325472)
chr5 (11-140)||(19645710-19645838)
chr5 (12-140)||(31646142-31646270)
chr5 (9-135)||(20271024-20271151)
chr5 (12-140)||(35906582-35906710)
chr5 (15-140)||(42505072-42505201)
chr5 (17-140)||(17218042-17218164)
chr5 (1-140)||(40775063-40775202)
chr5 (3-129)||(39591352-39591478)
chr5 (44-138)||(41358379-41358473)
chr5 (11-140)||(10923807-10923936)
chr5 (15-128)||(29310039-29310152)
chr5 (77-137)||(9034621-9034681)
chr5 (3-140)||(25770910-25771051)
chr5 (1-97)||(32390380-32390476)
chr5 (25-141)||(6281385-6281507)
chr5 (14-140)||(12439354-12439480)
chr5 (25-133)||(26294740-26294854)
chr5 (20-140)||(42781337-42781463)
chr5 (78-140)||(4726676-4726738)
chr5 (13-140)||(17732046-17732178)
chr5 (13-59)||(39179591-39179637)
chr5 (13-140)||(39415926-39416058)
chr5 (26-140)||(6012720-6012840)
chr5 (13-140)||(20483515-20483648)
chr5 (15-56)||(25962235-25962276)
chr5 (1-134)||(28662372-28662505)
chr5 (13-62)||(39915789-39915838)
chr5 (8-128)||(8957515-8957635)
chr5 (15-140)||(23881775-23881906)
chr5 (89-141)||(28041040-28041092)
chr5 (25-93)||(29098121-29098189)
chr5 (25-128)||(6074421-6074524)
chr5 (14-93)||(17699883-17699962)
chr5 (13-140)||(11734504-11734637)
chr5 (25-71)||(17566204-17566250)
chr5 (78-140)||(28423709-28423771)
chr5 (13-71)||(31255006-31255064)
chr5 (13-71)||(39531146-39531204)
chr5 (13-59)||(43494203-43494249)
chr5 (79-140)||(4070930-4070991)
chr5 (25-70)||(13161686-13161731)
chr5 (87-140)||(13161754-13161807)
chr5 (88-140)||(34000000-34000053)
chr5 (18-71)||(37985979-37986032)
chr5 (25-70)||(39558238-39558283)
chr5 (15-71)||(32309827-32309883)
[»] chr4 (87 HSPs)
chr4 (1-139)||(43157079-43157217)
chr4 (1-140)||(4622377-4622515)
chr4 (1-140)||(7242459-7242598)
chr4 (1-140)||(29576794-29576933)
chr4 (9-140)||(29474001-29474132)
chr4 (1-140)||(38434900-38435039)
chr4 (1-140)||(46775531-46775670)
chr4 (14-140)||(30416300-30416427)
chr4 (1-140)||(31311772-31311909)
chr4 (1-134)||(23002612-23002744)
chr4 (12-140)||(4634596-4634724)
chr4 (12-140)||(9662166-9662294)
chr4 (33-140)||(2945472-2945579)
chr4 (1-140)||(14346733-14346872)
chr4 (1-140)||(23067521-23067660)
chr4 (1-140)||(46728593-46728732)
chr4 (11-140)||(34668499-34668627)
chr4 (1-140)||(9474211-9474351)
chr4 (25-140)||(16992198-16992312)
chr4 (1-140)||(29589034-29589173)
chr4 (1-140)||(41486877-41487015)
chr4 (1-140)||(53903881-53904020)
chr4 (13-140)||(11209972-11210105)
chr4 (1-139)||(15729655-15729793)
chr4 (3-128)||(50981399-50981524)
chr4 (3-128)||(5388817-5388942)
chr4 (13-134)||(6082111-6082231)
chr4 (9-127)||(28990608-28990730)
chr4 (1-140)||(44374948-44375087)
chr4 (1-140)||(46716567-46716706)
chr4 (15-70)||(46829723-46829778)
chr4 (14-140)||(8712837-8712970)
chr4 (13-140)||(20887416-20887549)
chr4 (8-61)||(9781559-9781612)
chr4 (3-120)||(23926345-23926462)
chr4 (13-134)||(25658496-25658617)
chr4 (25-140)||(26674704-26674821)
chr4 (1-134)||(37869097-37869229)
chr4 (52-140)||(12519972-12520060)
chr4 (8-140)||(19885639-19885771)
chr4 (18-135)||(24568379-24568502)
chr4 (25-140)||(40198216-40198332)
chr4 (10-120)||(6789569-6789680)
chr4 (1-120)||(40861240-40861359)
chr4 (89-140)||(46268076-46268127)
chr4 (1-140)||(54420413-54420552)
chr4 (9-67)||(23963984-23964042)
chr4 (25-140)||(31522287-31522408)
chr4 (25-140)||(39797299-39797416)
chr4 (14-140)||(626218-626350)
chr4 (14-140)||(7083480-7083612)
chr4 (3-128)||(33020612-33020737)
chr4 (14-140)||(39837924-39838056)
chr4 (26-140)||(43244040-43244160)
chr4 (14-59)||(46267996-46268041)
chr4 (3-59)||(3673792-3673848)
chr4 (14-140)||(7060644-7060776)
chr4 (12-140)||(14542185-14542313)
chr4 (25-93)||(22757426-22757493)
chr4 (13-93)||(35658251-35658331)
chr4 (15-140)||(38943816-38943947)
chr4 (15-140)||(42197884-42198015)
chr4 (1-97)||(52555456-52555552)
chr4 (14-93)||(477733-477812)
chr4 (25-133)||(6912021-6912135)
chr4 (89-140)||(18502501-18502552)
chr4 (89-140)||(19745801-19745852)
chr4 (89-140)||(19793954-19794005)
chr4 (89-140)||(24100544-24100595)
chr4 (89-140)||(27091119-27091170)
chr4 (10-140)||(38169831-38169962)
chr4 (28-67)||(42032399-42032438)
chr4 (13-59)||(47466231-47466277)
chr4 (13-59)||(51152444-51152490)
chr4 (79-120)||(3169757-3169798)
chr4 (102-139)||(7008357-7008394)
chr4 (14-59)||(20399649-20399694)
chr4 (87-140)||(22121841-22121894)
chr4 (87-140)||(37431565-37431618)
chr4 (87-140)||(41837723-41837776)
chr4 (95-140)||(56236490-56236535)
chr4 (19-59)||(3171369-3171409)
chr4 (23-59)||(5814670-5814706)
chr4 (89-141)||(6882355-6882407)
chr4 (89-141)||(24611456-24611508)
chr4 (29-105)||(26625417-26625493)
chr4 (13-69)||(56172142-56172198)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-140)||(10002-10141)
[»] scaffold0316 (1 HSPs)
scaffold0316 (11-123)||(11893-12005)
[»] scaffold0042 (1 HSPs)
scaffold0042 (11-140)||(93993-94115)
[»] scaffold0432 (1 HSPs)
scaffold0432 (15-140)||(2107-2232)
[»] scaffold0090 (1 HSPs)
scaffold0090 (95-140)||(11227-11272)
[»] scaffold0023 (2 HSPs)
scaffold0023 (87-140)||(91095-91148)
scaffold0023 (3-56)||(91161-91214)
[»] scaffold0007 (1 HSPs)
scaffold0007 (87-140)||(201736-201789)
[»] scaffold0157 (1 HSPs)
scaffold0157 (52-140)||(851-939)
[»] scaffold0024 (1 HSPs)
scaffold0024 (12-140)||(36837-36965)
[»] scaffold0321 (1 HSPs)
scaffold0321 (13-140)||(6788-6922)
[»] scaffold0294 (1 HSPs)
scaffold0294 (15-141)||(3725-3857)
[»] scaffold0045 (1 HSPs)
scaffold0045 (79-140)||(48024-48085)
[»] scaffold1350 (1 HSPs)
scaffold1350 (25-101)||(1916-1992)
[»] scaffold0999 (1 HSPs)
scaffold0999 (13-93)||(2018-2098)
[»] scaffold1294 (1 HSPs)
scaffold1294 (1-40)||(1077-1116)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-140)||(11449-11588)
[»] scaffold0312 (1 HSPs)
scaffold0312 (14-57)||(6466-6509)
[»] scaffold0288 (1 HSPs)
scaffold0288 (13-60)||(20922-20969)
[»] scaffold0112 (1 HSPs)
scaffold0112 (13-56)||(25269-25312)
[»] scaffold0121 (1 HSPs)
scaffold0121 (15-140)||(12909-13035)
[»] scaffold2107 (1 HSPs)
scaffold2107 (86-135)||(1012-1065)
[»] scaffold0445 (1 HSPs)
scaffold0445 (25-69)||(1521-1565)


Alignment Details
Target: chr3 (Bit Score: 578; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 4 - 673
Target Start/End: Original strand, 28876778 - 28877445
Alignment:
Q  4 gtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattg 103  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28876778 gtatgcttttgtactttgtcattttatggtattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgtattgtattg 28876877  T
Q  104 atatactctatcaatttaaatgaataaatatcatttaccaaaaccttattacttgtatgtaaagataagataaaataagattctgactttaatcaataaa 203  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28876878 atatactctatcaatttgaatgaataaatatcatttaccaaaaccttattacttgtatgtaaagataagataaaataagattctgacttaactcaataaa 28876977  T
Q  204 tgaattatatttaattgtgaattttcatattgtgcttaatgccggataagccacaaatgcttggttaaaatataagaaatatatttaagagttattaatt 303  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28876978 tgaattatatttaattgtgaaatttcatattgtgcttaatgcgggataagccacaaatgcttggttaaaatataagaaatatatttaagagttattaatt 28877077  T
Q  304 caactcgacaaatacaattcataatgcgtataacatatggatgctagagccacatctcgatgtcttgtcaaaacactaaaatatcttaaaatctagagtg 403  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28877078 caactcgacaaatacaattcataatgcgtagaacatat-gatgctagagccacatctcgatgtcttgtcaaaacactaaaatatcttaaaatctagagta 28877176  T
Q  404 cagtatttatcatcttcgcaattgatatttttgttaacctgaaatcttcaagtcaccttaactttcactcttaccatacaagcataaaagtgtcatgcaa 503  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28877177 cagtatttatcattttcgcaattgatatttttgttaaccttaaattttcaagtcaccttaactttcactcttaccatacaagcataaaagtgtaatgcaa 28877276  T
Q  504 aaggggatacaagcatagtggagtatggtttctctcataccctccattgtcatggaggagtagaccacacactttaactatatttatcacgatggttgac 603  Q
    || ||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  28877277 aa-gggataccaacatagtggagtatggtttctctcataccctccattgtcatcgaggagtaaaccacacactttaactatatttatcacgatggttgac 28877375  T
Q  604 tcttgagcatgttgtagttaacaacgacttttattggagataattgattatctttttgtttgggtaactt 673  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  28877376 tcttgagcatgttgtagttaacaacgacttttattggagataattgattgtcttgttgtttgggtaactt 28877445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 4019907 - 4020039
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| ||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||||| || | ||||  ||||||||||||||||| |||      
T  4019907 gcttatgtactttgtcgttttatgctattaacatggatgttgtgagtttgtttgcagattcatcatttttgttttttgcgaatttgcattgtatcgatgc 4020006  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||||||||    
T  4020007 actctatcaatttgaatgaatgaatatcattta 4020039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 45664523 - 45664662
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||| ||||||| |||  ||||||||||||||||| | ||||||||||  ||||| || |||||||  || | |||| ||||||||| |||| ||    
T  45664523 tgtgtatgcatttgtaccttgcaattttatgctattaacatggatgttgtgagcctgtttacagattcatcctttttatttttagcgaatttacattata 45664622  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||||||||||| |||||||||||    
T  45664623 tcgatgtactctatcaatttaaatgaatgaatatcattta 45664662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 50520085 - 50520224
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| |||||||||||||||| | ||||||||||| ||||  || |||||||| || | |||| |||||||||||||| ||    
T  50520085 tgtgtaggcatttgtactttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcatttttatttttagcgaatttgcattata 50520184  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| ||||||| |||||| ||||    
T  50520185 tcgatgtactctttcaatttgaatgaatgaatatctttta 50520224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 3457251 - 3457384
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattg-----ata 106  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||| |||||||||||| || | |||| |||||||||| | ||||||||     ||     
T  3457251 tgtactttgtcgttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcatttttgtttttagcgaatttggatttgtattgtatcaatg 3457350  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||| |||||| ||||    
T  3457351 tactctatcaatttaaatgaatgaatatcgttta 3457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 22844361 - 22844493
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||| |||||||||| |||||||||||||||| | ||||||||||||||||  || |||| ||  || | |||| ||||||||| |||||||| ||| |    
T  22844361 gctttagtactttgtcgttttatgctattaacatggatgttgtgagtttgttcacatattcgtcctttttgttttaagcgaattttcattgtatcgatgt 22844460  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||  ||||||| |||||||||||    
T  22844461 actctatcaattcgaatgaatgaatatcattta 22844493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 27831409 - 27831539
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    |||||||| |||||| |||||||||||| ||| | |||||||||||||||| ||| ||||||   || | |||| ||||||||   ||||||| ||| ||    
T  27831409 cttttgtattttgtcgttttatgctattgacatggatgttgtgagtttgttcgcagattcattctttttgtttttagcgaattaa-attgtatcgatgta 27831507  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||||||||||||||||||    
T  27831508 ctctatcaatttaaatgaataaatatcattta 27831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 21803844 - 21803972
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    ||||||||||   ||| |||||||||||| | ||||||||||| ||||  ||||||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  21803844 ttgtactttgatgtttcatgctattaacatggatgttgtgagtctgttcacaaattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 21803943  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| |||||||||||||| ||||    
T  21803944 tatcaatttgaatgaataaatatctttta 21803972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 29776495 - 29776363
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||||||||||||||| ||||| |||||||||| |  ||||||||||||| | ||| |||||||  || | |||| | ||||||||||||||||  || |    
T  29776495 gcttttgtactttgtcgttttacgctattaacatggttgttgtgagtttgatcgcagattcatcctttttgtttttatcgaatttgcattgtatcaatgt 29776396  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||| ||| |||||||||||    
T  29776395 actctatcaatttgaataaatgaatatcattta 29776363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2598380 - 2598518
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| | |||||||||||||| |||| |||||||||||||||||||||||||  || | |||| || | ||||| ||||||    
T  2598380 tgtgtaggcatttgtactttgtcgtgttatgctattaacatgaatattgtgagtttgtttgcaaattcatcctttttgtttttag-ggatttgtattgta 2598478  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||| ||||||||| |||  || |||||||||||    
T  2598479 tcgatgtactatatcaatttgaatacatgaatatcattta 2598518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3088476 - 3088337
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||  |||||||||||||| | | ||||||||||  ||||  || |||||||| || | |||| |||||||||||||| ||    
T  3088476 tgtgtaggcatttgtactttgttgttttatgctattaatatggatgttgtgagcctgttcacagattcatcatttttgtttttagcgaatttgcattata 3088377  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| |||||||||||||| ||||    
T  3088376 tcgatgtactctttcaatttgaatgaataaatatctttta 3088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 40365535 - 40365662
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatata 108  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||| ||| || ||||  || || |||| | |||||||||||||||| ||| ||    
T  40365535 ttttgtactttgtcgttttatgctattaacatggatgttgtgagtttgttcgcagatgcatccttttttatttttaacgaatttgcattgtatcgatgta 40365634  T
Q  109 ctctatcaatttaaatgaataaatatca 136  Q
    || ||||||||| ||| |||| ||||||    
T  40365635 ctatatcaatttgaataaatatatatca 40365662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 30293126 - 30293240
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatg 125  Q
    ||||||||||||||  ||||| |||||| |||||||||||||||||| || | |||| |||||||||| |||||||  ||||| ||||||||||| | ||    
T  30293126 tttatgctattaacttgaatgatgtgagcttgtttgcaaattcatcatttttgtttttagcgaatttgtattgtatcaatatattctatcaatttgattg 30293225  T
Q  126 aataaatatcattta 140  Q
    ||| |||||| ||||    
T  30293226 aatgaatatcgttta 30293240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 43029996 - 43030124
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| |||||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  43029996 ttgtactttgccattttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 43030095  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  43030096 tatcaatttgaatgaatgaatatctttta 43030124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25939308 - 25939169
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||  ||| ||||||||| |||| | ||||||||| |||||| | | |||||||  || | |||| |  ||||||||||||||    
T  25939308 tgtgtaggcttttgtactttaccatcttatgctatcaacatggatgttgtgaatttgttcgtagattcatcctttttatttttaatgaatttgcattgta 25939209  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||| ||||||||| ||||||| |||||||||||    
T  25939208 tcgatgtactttatcaatttgaatgaatgaatatcattta 25939169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 29182422 - 29182295
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||| ||||||||||||||||||||||| | ||||||||||  ||||   | |||||||| || | |||| ||| |||||||||| ||    
T  29182422 tgtgtaggcatttgtattttgtcattttatgctattaacatggatgttgtgagcctgttcatagattcatcatttttatttttagcaaatttgcattata 29182323  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    | ||| |||||||||||||| |||||||    
T  29182322 tcgatgtactctatcaatttgaatgaat 29182295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32089743 - 32089604
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||| |||||| || |  ||||||||||||||   || |||||||  || | |||| | |||||||||||||||    
T  32089743 tgtgtaggcttttgtactttgtcgttttatactattatcatggttgttgtgagtttgtgcacagattcatcgtttttgtttttaacgaatttgcattgta 32089644  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    || || |||||||||||||| | ||||| ||||| |||||    
T  32089643 ttaatgtactctatcaatttgagtgaatgaatataattta 32089604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 1165197 - 1165075
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||| ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  1165197 ttgtactttgccgttttatgctattaacatggatgatgtgagtctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 1165098  T
Q  112 tatcaatttaaatgaataaatat 134  Q
    ||||||||| ||||||| |||||    
T  1165097 tatcaatttgaatgaatgaatat 1165075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39340501 - 39340636
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||| ||||||  | ||||||||||||||     |||||||||||||||| |||||||||||  || | |||| || ||||||||||||||    
T  39340501 tgtgtaggcttttatacttttccgttttatgctattaa----gatgttgtgagtttgttcgcaaattcatcctttttgtttttagggaatttgcattgta 39340596  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||||||| |||||||||| || |||| ||||| |||||    
T  39340597 tcgatataccctatcaatttgaaagaatgaatattattta 39340636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 28995121 - 28994993
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||||||||   | |||||||  || | |||| |||||||||||||| ||    
T  28995121 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgcattata 28995022  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
    | ||| |||||| || |||| ||||||||    
T  28995021 tcgatgtactctttcgatttgaatgaata 28994993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20200870 - 20200731
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||| ||||||||| | ||||||||||| |||| ||| |||||||  ||   |||| |||||||||| ||| ||    
T  20200870 tgtgtaggcatttgtactttgccgttttatactattaacatggatgttgtgagtctgttcgcatattcatccttttcatttttagcgaatttgtattata 20200771  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||||||||||||| ||||||| |||||| ||||    
T  20200770 tcaatgtactctatcaatttgaatgaatgaatatctttta 20200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 20203052 - 20202913
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||| ||||||||| | ||||||||||| |||| ||| |||||||  ||   |||| |||||||||| ||| ||    
T  20203052 tgtgtaggcatttgtactttgccgttttatactattaacatggatgttgtgagtctgttcgcatattcatccttttcatttttagcgaatttgtattata 20202953  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||||||||||||| ||||||| |||||| ||||    
T  20202952 tcaatgtactctatcaatttgaatgaatgaatatctttta 20202913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 22286563 - 22286425
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||| || | |||| |||||||||||||| ||    
T  22286563 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatcatttttgtttttagcgaatttgcattata 22286464  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| |||| || ||||||| |||||| ||||    
T  22286463 tcgatgtactctctcaa-ttgaatgaatgaatatctttta 22286425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 25373899 - 25373836
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||| |||||||    
T  25373899 gcttttgtactttgtcgttttatgctattaacatgaatgttgtgagttttttcgcagattcatc 25373836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32237808 - 32237681
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||| |||||   |||||||||||||||| | |||||||| ||||||| ||| |||||||   | | || | |||||||||||||||||    
T  32237808 tgtgtaggcttttgtgctttgcagttttatgctattaacatggatgttgtgtgtttgttcgcagattcatcctctttgttgttagcgaatttgcattgta 32237709  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    | ||| |||||||| ||||| |||||||    
T  32237708 tcgatgtactctattaatttgaatgaat 32237681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40797335 - 40797454
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| ||||||||||||||||   ||| ||||||||||||  || |||||||  ||   |||| ||||||||| |||||||    
T  40797335 tgtgtaggctttagtactttgtcgttttatgctattaacatagatgatgtgagtttgttcacagattcatccttttcgtttttagcgaattttcattgta 40797434  T
Q  101 ttgatatactctatcaattt 120  Q
    | ||| ||||||||||||||    
T  40797435 tcgatgtactctatcaattt 40797454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 46926749 - 46926840
Alignment:
Q  44 atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||||||| ||||  ||||||||||  || | |||| |||||||||||||| ||| ||| |||||||||||||| ||||||||||||||    
T  46926749 atgttgtgagtctgttcacaaattcatcctttttgtttttagcgaatttgcattatatcgatgtactctatcaatttgaatgaataaatatc 46926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 20251970 - 20252096
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatact 110  Q
    |||||||||| | |||||| ||||||||| | ||||||||||| ||||  || |||||||  || || |||| |||||||||||||  ||||||| ||||    
T  20251970 ttgtactttgccgttttatactattaacatggatgttgtgagtctgttcacatattcatccttttttgtttttagcgaatttgcat--tattgatgtact 20252067  T
Q  111 ctatcaatttaaatgaataaatatcattt 139  Q
     ||||||||| ||||||| ||||||||||    
T  20252068 ttatcaatttgaatgaatgaatatcattt 20252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 33076597 - 33076725
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||| | |||||||||||||||| | || |||||||| ||||  || |||||||  || | |||| | ||||||||||   ||| ||| ||||    
T  33076597 tttgtactttgccgttttatgctattaacatggatattgtgagtctgttcacatattcatcctttttgtttttaacgaatttgcaccatatcgatgtact 33076696  T
Q  111 ctatcaatttaaatgaataaatatcattt 139  Q
    |||||||||| ||||||| ||||||||||    
T  33076697 ctatcaatttgaatgaatgaatatcattt 33076725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 40461799 - 40461665
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacga---atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgat 105  Q
    ||||||||||||||| || |||||| |||||| ||   ||||||||| |||||| ||| |||||  | ||   |||| |||||||||||||||||| |||    
T  40461799 cttttgtactttgtcgttctatgcttttaacatgatggatgttgtgactttgttcgcagattcaaaattttcatttttagcgaatttgcattgtatcgat 40461700  T
Q  106 atactctatcaatttaaatgaataaatatcattta 140  Q
     |||| ||||||||| ||| ||| |||||||||||    
T  40461699 gtactttatcaatttgaataaattaatatcattta 40461665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43839329 - 43839193
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | ||||||| |||||||| | ||||||||||| ||||  || ||||||   || | |||| ||| ||||| |||| ||    
T  43839329 tgtgtaggcatttgtactttgccgttttatgatattaacatggatgttgtgagtctgttcacagattcattctttttatttttagcaaatttacattata 43839230  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcat 137  Q
    | ||| |||||||||||||| ||||||| ||||||||    
T  43839229 tcgatgtactctatcaatttgaatgaatgaatatcat 43839193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43243110 - 43243237
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | ||||||| ||| || |||||||| |||||||   ||| ||||||||| || ||| |||||||| || | |||| ||| |||||||||||||    
T  43243110 tgtgtaggtttttgtattttttcgttttatgcaattaacatcgatgatgtgagtttcttcgcatattcatcatttttgtttttagcaaatttgcattgta 43243209  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    ||||| |||| |||||| || |||||||    
T  43243210 ttgatgtactttatcaagttgaatgaat 43243237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 40013060 - 40012939
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | |||||||||||||| |  || |||||||  || | |||| |||||||||| |||      |||| ||||||||||||||||    
T  40013060 ttttatgctattaacatggatgttgtgagtttgatcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatatactctatcaat 40012961  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || |||||||||||||| ||||    
T  40012960 ttgaatgaataaatatcgttta 40012939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 40883674 - 40883548
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattg-----atat 107  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||  || |||||||  || | |||| |||||||||| | ||||||||     || |    
T  40883674 gtactttgtcgttttatgctattaacacggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcaatgt 40883575  T
Q  108 actctatcaatttaaatgaataaatat 134  Q
    ||||||||||||| ||||||| |||||    
T  40883574 actctatcaatttgaatgaatgaatat 40883548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 11846928 - 11846989
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||| ||||||| |||||| ||||||| ||||||| |||||||||||    
T  11846928 tttttagcgaatttgcattttattgatgtactctgtcaatttgaatgaatgaatatcattta 11846989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 33977737 - 33977604
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | ||||||| |||||||| | ||||||||||| ||||| || |||||||  || | |||| | |||||||||||| ||    
T  33977737 tgtgtaggcatttgtactttgccgttttatgttattaacatggatgttgtgagtctgtttacagattcatcctttttgtttttaacgaatttgcatttta 33977638  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||  | ||||||| ||||||| |||||    
T  33977637 tcgatgtaccttttcaatttgaatgaatgaatat 33977604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 2148067 - 2148127
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||||| | |||||||||||||| | | |||||||||||||||| |||||||||||    
T  2148067 tttgtactttgccgttttatgctattaatatggatgttgtgagtttgttcgcaaattcatc 2148127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 47587183 - 47587115
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||| |||||| |||| |||| |||||||||||||||| ||||| |||||||||||| ||| |||||||    
T  47587183 tgtaggcttttatactctgtcgttttatgctattaacatgaatgatgtgagtttgttcgcagattcatc 47587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 45047908 - 45047959
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  45047908 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcattta 45047959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 47914395 - 47914309
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt 97  Q
    |||||||||||||||||||||||||||||| | ||||||| ||  ||||  || |||||||  || | |||| ||||||||||||||    
T  47914395 tttgtactttgtcattttatgctattaacatggatgttgtcaggctgttcacagattcatcctttttgtttttagcgaatttgcatt 47914309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 50460492 - 50460562
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||| |||||||||||||||  ||||||| | |||||| | |||||||||||||||| ||| |||||||    
T  50460492 tgtgtaggcttttgtactttgttgttttatgttgttaacatggatgttgtgagtttgttcgcatattcatc 50460562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 51742140 - 51742234
Alignment:
Q  35 ttaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaata 129  Q
    |||||| | |||||||||||| ||| ||| ||||||   || ||||||  ||||||||| |||||||  ||||||||||||||||| ||||||||    
T  51742140 ttaacatggatgttgtgagttcgttcgcatattcattctttttttttttggcgaatttgtattgtatcaatatactctatcaatttgaatgaata 51742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 53155230 - 53155097
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgata 106  Q
    ||||||||| | ||||| |||||||||| | ||||||||||||||||  || |||  ||| || | |||| |||||||||| |||      |||| |||     
T  53155230 tgtactttgcctttttacgctattaacatggatgttgtgagtttgttcacagattattcatttttgtttttagcgaatttgaatttgtattgtatcgatg 53155131  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||| |||||| ||||    
T  53155130 tactctatcaatttaaatgaatgaatatcgttta 53155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 54706532 - 54706399
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||  |||     
T  54706532 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacatattcatcttttttgtttttagcgaatatggatttgtattgtaacgatg 54706433  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  54706432 tactctatcaatttgaatgaatgaatatcgttta 54706399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 55446457 - 55446511
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||||||||||| |||||||||| ||||||| ||||||| |||||| |||||    
T  55446457 gaatttgcattgtatcgatatactctgtcaatttgaatgaatgaatatcgtttac 55446511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 913128 - 913019
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||| ||||||||||||  || |||||||  ||   |||| ||||||||| |||||||    
T  913128 tgtgtaggctttagtactttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatccttttcgtttttagcgaattttcattgta 913029  T
Q  101 ttgatatact 110  Q
    | ||| ||||    
T  913028 tcgatgtact 913019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 13701801 - 13701669
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||   | |||||||  || | |||| |||||||||| |||      |||| ||| |    
T  13701801 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcaaagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgt 13701702  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  13701701 actctatcaatttgaatgaatgaatatcgttta 13701669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 14585871 - 14585924
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||||    
T  14585871 gaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgttta 14585924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 19645599 - 19645652
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||||    
T  19645599 gaatttgaattgtattgatgtactctatcaatttgaatgaatgaatatcgttta 19645652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 21084533 - 21084448
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattg 103  Q
    |||||| |||||||||||||||| ||||| | |||| ||||| ||| ||||||||  | | |||| |||||||||| |||||||||    
T  21084533 tttgtcgttttatgctattaacatgaatgatatgagattgttcgcagattcatcatctttgtttttagcgaatttgtattgtattg 21084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 25084418 - 25084459
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaat 128  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  25084418 gaatttgtattgtattaatatactctatcaatttaaatgaat 25084459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 31270638 - 31270766
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgata 106  Q
    ||||||||| | || ||||| ||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||| |||      ||||||||     
T  31270638 tgtactttgccgttgtatgcaattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatg 31270737  T
Q  107 tactctatcaatttaaatgaataaatatc 135  Q
    ||||||||| |||| ||||||||||||||    
T  31270738 tactctatccatttgaatgaataaatatc 31270766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 4082049 - 4082164
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||||||||||||||||| || |||||||  || |  ||| |||||      ||||| ||||||| ||| ||||||||||||    
T  4082049 ttttatgctattaacatggatgttgtgagtttgtttacagattcatcctttttggttttagcgaatttggatttgtattgtatcgatgtactctatcaat 4082148  T
Q  119 ttaaatgaataaatat 134  Q
    || ||||||| |||||    
T  4082149 ttgaatgaatgaatat 4082164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 10977556 - 10977684
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    ||||||||||   |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||  ||| ||| ||||     
T  10977556 ttgtactttgctgttttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgcatgatatcgatgtacta 10977655  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  10977656 tatcaatttgaatgaatgaatatctttta 10977684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 21586209 - 21586301
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    |||||||||||||   ||||||||||||||||   ||||||||||||||||   | |||||||  || | |||| ||||||||||||||||||    
T  21586209 cttttgtactttgctgttttatgctattaacatcgatgttgtgagtttgttcatatattcatcctttttgtttttagcgaatttgcattgtat 21586301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 30156088 - 30156044
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  30156088 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 30156044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 35175038 - 35175094
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||  |||||||||    
T  35175038 gtactttgtcgttttatgctattaacatggatgatgtgagtttgttcacaaattcat 35175094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 53402950 - 53403077
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||| ||||||||  || |||||||| || | |||| |||||      ||||| ||||||| |||     
T  53402950 tgtactttgccgttttatgctattaacatggatgttgttagtttgttcacatattcatcatttttgtttttagcgaatttagatttgtattgtatcgatg 53403049  T
Q  107 tactctatcaatttaaatgaataaatat 134  Q
    |||||||||||||| |||| || |||||    
T  53403050 tactctatcaatttgaatgcatgaatat 53403077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 3961570 - 3961523
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    ||||||| |||||| | | |||||||||||||||||||||||||||||    
T  3961570 ttttatgttattaatatggatgttgtgagtttgtttgcaaattcatca 3961523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34767288 - 34767420
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||| | |||||||||||||||| ||| | || |||||||        ||||||  || | |||| ||| ||||| | |||||    
T  34767288 tgtgtaggcttttgtactttgccgttttatgctattaacatgaacgctgcgagtttg--------ttcatcctttttgtttttagcaaatttacgttgta 34767379  T
Q  101 ttgatatactctatcaa-tttaaatgaataaatatcattta 140  Q
    ||||| ||||||||||| ||| ||||||| |||||||||||    
T  34767380 ttgatgtactctatcaattttgaatgaatgaatatcattta 34767420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 42106464 - 42106559
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaattt 120  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||  ||   |||| | ||||||| |||||||| ||| ||||||||||||||    
T  42106464 ttttatgctattaacatggatgatgtgagtttgttcacagattcatccttttcgtttttaacgaattttcattgtatcgatgtactctatcaattt 42106559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 48053113 - 48053070
Alignment:
Q  86 cgaatttgcattgtattgatatactctatcaatttaaatgaata 129  Q
    ||||||||||||| || |||||||||||||||||| ||||||||    
T  48053113 cgaatttgcattgcatcgatatactctatcaatttgaatgaata 48053070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 2192419 - 2192540
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||||||||| ||||||  || |||||||  || | |||| |||||||||| |||      |||| ||| ||||||||||||    
T  2192419 ttttatgctattaacatggatgttgtgaatttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcgatgtactctatcaat 2192518  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||||||| |||||| ||||    
T  2192519 ttgaatgaatgaatatcgttta 2192540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 40702749 - 40702807
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||||||||||||||| |||||| | ||| ||| |||||||| ||| |||||||    
T  40702749 tgtactttgtcattttatgctcttaacatggatgatgtaagtttgttcgcagattcatc 40702807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 105846 - 105801
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||    
T  105846 gtactttgtcgttttatgctattaacatggatgatgtgagtttgtt 105801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 35175573 - 35175626
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||| ||||||||||||  || ||||||||||||||| ||| |||||||    
T  35175573 tttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatc 35175626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 44984585 - 44984544
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaat 128  Q
    ||||||| |||||||  |||||||||||||||||||||||||    
T  44984585 gaatttgtattgtatcaatatactctatcaatttaaatgaat 44984544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 51256792 - 51256833
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaata 129  Q
    |||||| ||||||| |||||||||||||||||| ||||||||    
T  51256792 aatttgtattgtatcgatatactctatcaatttgaatgaata 51256833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 35670722 - 35670854
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| |||| |||||| |||||| ||||||||| |||| |||||| |||||| ||| ||| ||| ||| | |||| || ||||||  | |||||   | |    
T  35670722 gcttatgtaatttgtcgttttatactattaacatgaatcttgtgaatttgttcgcacattaatcccttttgtttttagtgaatttatactgtatgagtgt 35670821  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||| ||||||||| ||||||  |||||||||||    
T  35670822 actttatcaatttcaatgaacgaatatcattta 35670854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 37051898 - 37052027
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctat----taacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattg 98  Q
    |||| |||| ||||||||| | |||||||||||    ||||| | ||||||||||||| ||  ||||||||||  || | |||| || ||||||| ||||    
T  37051898 tgtaggcttatgtactttgccgttttatgctatatattaacatggatgttgtgagttttttcacaaattcatcctttttgtttttagtgaatttgtattg 37051997  T
Q  99 tattgatatactctatcaatttaaatgaat 128  Q
     || ||| |||||| ||||||| |||||||    
T  37051998 catcgatgtactctgtcaatttgaatgaat 37052027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 47176071 - 47176031
Alignment:
Q  29 atgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  47176071 atgctattaacttgaatgttgtgagtttgtttgctaattca 47176031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 47587092 - 47587043
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| |||||||||||||    ||||||||| |||||||||||||||||||    
T  47587092 gaatttgtattgtattgatat----tatcaatttgaatgaataaatatcattta 47587043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 9e-35; HSPs: 82)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5989915 - 5990054
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||||||||||||| |||| ||||||||||||| ||| |||||||| || | |||| |||||||||||||| ||    
T  5989915 tgtgtaggcttttgtactttgtcgttttatgctattaacatgaatattgtgagtttgttcgcagattcatcatttttgtttttagcgaatttgcattcta 5990014  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||| ||| ||||||||||||| ||| |||||||    
T  5990015 ttgatgtactatattaatttaaatgaatgaatgtcattta 5990054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 16938084 - 16937946
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||  ||||||| |||||||| | ||  |||||||||||| ||| ||||||   || | |||| |||||||||||||||||    
T  16938084 tgtgtaggcttttgtactttgttgttttatggtattaacatggattctgtgagtttgttcgcagattcatgctttttgtttttagcgaatttgcattgta 16937985  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    | ||| |||||||||||||||||||||| ||||||||||    
T  16937984 tcgatgtactctatcaatttaaatgaatgaatatcattt 16937946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 5328251 - 5328388
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||| ||||||||||| | |||||| ||||||||| ||||||||||||  | ||| || ||||||| ||| |||||| |||||||||||||| ||    
T  5328251 tgtgtatgcatttgtactttgccgttttatactattaacatgaatgttgtgagcctatttacagattcatc-cttttttttt-agcgaatttgcattata 5328348  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||||||||||||| |||| |||||||||||    
T  5328349 tcgatgtactctatcaatttaaaagaatgaatatcattta 5328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9799823 - 9799684
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||| || |  |||||||||||||||| | |||||||||||||||| ||| |||| ||  || | |||| || | ||||||||||||    
T  9799823 tgtgtaggcttttgtacgttttagttttatgctattaacatggatgttgtgagtttgttcgcatattcctcttttttgtttttagagcatttgcattgta 9799724  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||||||||| ||||||| |||||||||||    
T  9799723 ttgatgtactctatcaatttgaatgaatgaatatcattta 9799684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41996845 - 41996984
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||||| |||||||||||||||| | ||||||||||| ||||  || |||||||  || | |||| |||||||||||||| ||    
T  41996845 tgtgtaggcatttgtaccttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgtttttagcgaatttgcattata 41996944  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||| |||||||||||||||| |||||||||||    
T  41996945 tcgatgtactcgatcaatttaaatgaatgaatatcattta 41996984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 1215151 - 1215026
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||||| ||||||| ||||||||   ||||||||||||||||  ||||||||||| || | |||| |||||||||| |||| ||     
T  1215151 tgtaggcttatgtactttgtcgttttatgttattaacattgatgttgtgagtttgttcacaaattcatcatttttgtttttagcgaatttgtattgcatc 1215052  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| ||||||||||||||||||||||    
T  1215051 gatgtactctatcaatttaaatgaat 1215026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 15665850 - 15665982
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||||| ||| || | |||||||||||||||| | |||||||||||||||||||| |||| ||  || | ||||  ||||||||||||||||| ||| |    
T  15665850 gcttttgcactatgccgttttatgctattaacatggatgttgtgagtttgtttgcagattcgtcctttttgtttttggcgaatttgcattgtatcgatgt 15665949  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| ||| |||||||    
T  15665950 actctatcaatttgaatgaatgaatgtcattta 15665982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17019402 - 17019541
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | ||||||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||||  ||   |||| ||||| |||| ||||||    
T  17019402 tgtgtaggattttgtactttgctattttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcgactttgtattgta 17019501  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||  |||||||  ||||| ||||||| |||||||||||    
T  17019502 ttgagttactctactaatttgaatgaatgaatatcattta 17019541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 17549839 - 17549978
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | ||||||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||||  ||   |||| ||||| |||| ||||||    
T  17549839 tgtgtaggattttgtactttgctattttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttagcgactttgtattgta 17549938  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||  |||||||  ||||| ||||||| |||||||||||    
T  17549939 ttgagttactctactaatttgaatgaatgaatatcattta 17549978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12244028 - 12243894
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| ||||||| |||||||| | |||||||||||||||| ||| |||||||  || | |||| || ||||||||||| ||    
T  12244028 tgtgtaggcttttgtactttgtcgttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttatttttagtgaatttgcattata 12243929  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| |||||||||| ||| || |||| ||||||    
T  12243928 tcgatgtactctatcagtttgaacgaatgaatatc 12243894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 9992968 - 9993107
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||||||||   |||||||||||||||||| ||||||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  9992968 tgtgtaggcatttgtactttgctgttttatgctattaacacggatgttgtgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 9993067  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||| ||||    
T  9993068 tcgatgtactctatcaatttgaatgaatgaatatctttta 9993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16937151 - 16937012
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||  |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  16937151 tgtgtaggctttagtactttgttgttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttattttaagcgaattttcattgta 16937052  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||||||| |||||| ||||    
T  16937051 tcgatgtactctaccaatttgaatgaatgaatatctttta 16937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 32104649 - 32104510
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||| ||||||| ||| | |||||||||||||||| | ||||||||||  ||||  || |||||||| || | |||| | |||||||||||| ||    
T  32104649 tgtgtatgcatttgtaccttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatcatttttgtttttaacgaatttgcattata 32104550  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| ||||| |||||    
T  32104549 tcgatgtactctatcaatttgaatgaatgaatataattta 32104510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 32062098 - 32062227
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    ||||||||| || |||||||| |||||||||||||||| | ||||||||||||||||  || ||| |||  || | |||| |||||||||| |||| ||     
T  32062098 tgtatgcttatgcactttgtcgttttatgctattaacatggatgttgtgagtttgttcacacattgatcctttttatttttagcgaatttgtattgcatc 32062197  T
Q  103 gatatactctatcaatttaaatgaataaat 132  Q
    ||| |||| ||||| |||||||||||||||    
T  32062198 gatgtactatatcattttaaatgaataaat 32062227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 18994191 - 18994322
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||||||||| |||| |||||||||||||||| | ||||||||| |||||| ||| |||||||  || | |||| |||| ||||||| ||||| ||| |    
T  18994191 gcttttgtactatgtcgttttatgctattaacatggatgttgtgattttgttcgcagattcatcctttttatttttagcg-atttgcaatgtatcgatgt 18994289  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||| ||||||| | |||||||||    
T  18994290 actctattaatttgaatgaatgattatcattta 18994322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 27 - 140
Target Start/End: Original strand, 13977738 - 13977851
Alignment:
Q  27 ttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatga 126  Q
    ||||||||||||||   ||| |||||||||||| ||| ||||||  ||| | |||| || ||||||||||||||| ||| |||||||||||||| || ||    
T  13977738 ttatgctattaacatagatgctgtgagtttgttcgcagattcatttcttttgtttttagtgaatttgcattgtatcgatgtactctatcaatttgaacga 13977837  T
Q  127 ataaatatcattta 140  Q
    || |||||||||||    
T  13977838 atgaatatcattta 13977851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 124
Target Start/End: Complemental strand, 27534222 - 27534101
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||| | |||||||||||||||| ||||||||||||||||||  || |||||||  || | |||| || ||||||| |||| ||     
T  27534222 tgtaggcttatgtactttgccgttttatgctattaacatgaatgttgtgagtttgttcacagattcatcctttttatttttagtgaatttgtattgcatc 27534123  T
Q  103 gatatactctatcaatttaaat 124  Q
    ||| |||||| |||||||||||    
T  27534122 gatgtactctttcaatttaaat 27534101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 36545582 - 36545456
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatact 110  Q
    |||||||||||| |||||||||||||||| | ||||||||||  ||||  ||||||||||  || || |||| |||||||||||||  ||| ||| ||||    
T  36545582 ttgtactttgtcgttttatgctattaacatggatgttgtgagcctgttcacaaattcatccttttttgtttttagcgaatttgcat--tatcgatgtact 36545485  T
Q  111 ctatcaatttaaatgaataaatatcattt 139  Q
    |||||||||| ||| ||| ||||||||||    
T  36545484 ctatcaatttgaataaatgaatatcattt 36545456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 7280938 - 7280802
Alignment:
Q  4 gtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattg 103  Q
    ||||| |||||||||||||  ||||||| |||||||| | ||||| |||||||||| ||||||||||   || | |||| | |||||| | ||||||| |    
T  7280938 gtatgtttttgtactttgttgttttatgatattaacatggatgttatgagtttgttcgcaaattcattctttttctttttatcgaattagtattgtatcg 7280839  T
Q  104 atatactctatcaatttaaatgaataaatatcattta 140  Q
    ||  ||||||||||||| |||||||  ||||||||||    
T  7280838 atgaactctatcaatttgaatgaatgcatatcattta 7280802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37720142 - 37720269
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||||||||||| | | ||| || ||||||||| | | |||||||  || | |||| ||||||||| ||||| |    
T  37720142 tgtgtaggcttttgtactttgtcgttttatgctattaatatggatgctgcgagtttgttcggagattcatcctttttatttttagcgaatttacattg-a 37720240  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
    | ||| |||||||||||||| ||||||||    
T  37720241 tcgatgtactctatcaatttgaatgaata 37720269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 44295629 - 44295757
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||| ||||||||| | ||| ||||||  ||||  || |||||||| || | |||| |||||||||||||| ||| ||| |||||    
T  44295629 ttgtactttgccgttttatcctattaacatggatgatgtgagcctgttcacatattcatcatttttgtttttagcgaatttgcattatatcgatgtactc 44295728  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  44295729 tatcaatttgaatgaatgaatatctttta 44295757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2629212 - 2629354
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttat--gctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattg 98  Q
    |||||| | ||| |||||||||| ||||||  |||||||||| | ||||||||||||||||   |||||||||  || | |||||||| ||||| |||||    
T  2629212 tgtgtaggatttagtactttgtcgttttatatgctattaacatggatgttgtgagtttgttcataaattcatcctttttgttttcagctaattttcattg 2629311  T
Q  99 tat-tgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||  ||| ||||||||||| || ||||||| |||||||||||    
T  2629312 tatcggatgtactctatcaacttgaatgaattaatatcattta 2629354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12248523 - 12248384
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||| |||| | ||||||| |||||||| | ||| || |||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  12248523 tgtgtaggctttagtattttgccgttttatgttattaacatggatgatgcgagtttgttcacatattcatcctttttgtttttagcgaattttcattgta 12248424  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||||||| |||||||||||    
T  12248423 tcgatgtactctaccaatttgaatgaatgaatatcattta 12248384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 13576007 - 13575881
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatata 108  Q
    ||||||||  |||||||||||||||| | |||||||||||||||| |||||||||||  || | |||| |||||      || || ||||||| ||| ||    
T  13576007 tactttgttgttttatgctattaacatggatgttgtgagtttgttcgcaaattcatcctttttgtttttagcgactttggatatgtattgtatcgatgta 13575908  T
Q  109 ctctatcaatttaaatgaataaatatc 135  Q
    |||||||||||||||||||| ||||||    
T  13575907 ctctatcaatttaaatgaatgaatatc 13575881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 18196946 - 18196831
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    ||||||||| | |||||||| ||||||| ||| |||| ||||||||| ||| ||| ||  ||| | |||| | |||||||| ||||||| ||||||||||    
T  18196946 tgtactttgccgttttatgcgattaacatgaacgttgggagtttgttcgcagattgattccttttgtttttaacgaatttgtattgtatcgatatactct 18196847  T
Q  113 atcaatttaaatgaat 128  Q
    |||||||| |||||||    
T  18196846 atcaatttgaatgaat 18196831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 26538702 - 26538825
Alignment:
Q  17 ctttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatca 116  Q
    ||||||| ||||| ||| || ||| | ||||||||||||||||  ||||||||||  || | |||| ||| |||||||||||||| ||| ||||| ||||    
T  26538702 ctttgtcgttttacgctgttgacatggatgttgtgagtttgttcacaaattcatccattttgtttttagcaaatttgcattgtatcgatgtactcaatca 26538801  T
Q  117 atttaaatgaataaatatcattta 140  Q
    |||| ||||||| | |||||||||    
T  26538802 atttgaatgaatgattatcattta 26538825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 15237347 - 15237213
Alignment:
Q  6 atgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgat 105  Q
    |||||| ||||||||||  ||||||||||||||||   |||||||||| |||||  || |||||||| || | |||| | |||||||  ||| |||||||    
T  15237347 atgcttctgtactttgtggttttatgctattaacatagatgttgtgagcttgttctcagattcatcatttttgtttttaacgaatttttattctattgat 15237248  T
Q  106 atactctatcaatttaaatgaataaatatcattta 140  Q
     |||||||||||||| |   |||||||||||||||    
T  15237247 gtactctatcaatttgatcaaataaatatcattta 15237213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 24790968 - 24790837
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||  || ||||||| ||| |||||| |||||      ||||| ||||||| |||     
T  24790968 tgtactttgccattttatgctattaacatggatgttgtgagtttgttcacagattcatc-ctt-tttttttagcgaatttggatttgtattgtatcgatg 24790871  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  24790870 tactctatcaatttgaatgaatgaatatcgttta 24790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 31147637 - 31147514
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||||| |||||||||||||||||||||||||| | |||  |||| |||||| ||| ||||||||  | |||||| || ||||||||||||||      
T  31147637 tgtaggcttttatactttgtcattttatgctattaacatggatgcagtgaatttgttcgcatattcatca--tttttttttagtgaatttgcattgtaac 31147540  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||| ||| ||||| |||||||    
T  31147539 gatgtactatattaattttaatgaat 31147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 5457383 - 5457512
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||||| ||||||||||||| || |  |||||||||  ||||  || |||||||| || | |||| |||||||||  ||| ||| ||| ||||    
T  5457383 tttgtaccttgtcgttttatgctattagcatgggtgttgtgagcatgttcacagattcatcatttttgtttttagcgaatttatattatatcgatgtact 5457482  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||||||||    
T  5457483 ctatcaatttgaatgaatgaatatcattta 5457512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 18190661 - 18190536
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||||| |||||||||||||| | | ||||||||||||||||  || ||||||   || | |||| |||||||||| |||| ||     
T  18190661 tgtaggcttgtgtactttgtcgttttatgctattaatatggatgttgtgagtttgttcacagattcattctttttgtttttagcgaatttgtattgcatc 18190562  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||| ||||| |||||||    
T  18190561 gatgtactctattaatttgaatgaat 18190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 32413102 - 32413231
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| ||||| |||||||||| | ||||||||||  | ||   | |||||||  || | |||| |||||||||||||| |||  || ||||    
T  32413102 tttgtactttgtcgttttaagctattaacatgtatgttgtgagccttttcagatattcatcctttttgtttttagcgaatttgcattatatcaatgtact 32413201  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||||||||    
T  32413202 ctatcaatttgaatgaatgaatatcattta 32413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 10043080 - 10043191
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||| |||||||||| |||||||||||||||| | ||||||||||||||||   | ||| |||  || | |||| ||||||||| |||||||| ||| |    
T  10043080 gctttagtactttgtcgttttatgctattaacatggatgttgtgagtttgttcagagatttatc-tttttgtttttagcgaattttcattgtatcgatgt 10043178  T
Q  108 actctatcaattt 120  Q
    |||||||||||||    
T  10043179 actctatcaattt 10043191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 14918474 - 14918426
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagttt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  14918474 gcttttgtactttgtcgttttatgctattaacacggatgttgtgagttt 14918426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3925502 - 3925364
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | ||||||| |||||||| | ||| ||||||||||||  || |||||||| || | |||| ||| ||||| || ||||    
T  3925502 tgtgtaggctttagtactttgccgttttatgttattaacatggatgatgtgagtttgttcacagattcatcagttttgtttttagcaaattttca-tgta 3925404  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| | |||| ||||||| |||||||||||    
T  3925403 tcgatgtactctacccatttgaatgaatgaatatcattta 3925364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 23970982 - 23970875
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt-gcattgtattgatatactct 112  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||| |||| | ||||||| ||| ||||||    
T  23970982 gtactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcggatttggtattgtatcgatgtactct 23970883  T
Q  113 atcaattt 120  Q
    ||||||||    
T  23970882 atcaattt 23970875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 7269269 - 7269159
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatac 109  Q
    |||||||||||||  ||||||| |||||||| | ||| | |||||||||| |||||||||||  || | |||| | |||||||| ||||||| |||  ||    
T  7269269 ttttgtactttgttgttttatgatattaacatggatgctatgagtttgttcgcaaattcatcctttttatttttatcgaatttgtattgtatcgatgaac 7269170  T
Q  110 tctatcaattt 120  Q
    |||||||||||    
T  7269169 tctatcaattt 7269159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 11298562 - 11298436
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    ||||||||||  |||||||||||||||| | ||||||||||||||||   | |||||||  || | |||| || ||||||| |||| || ||| ||||||    
T  11298562 tgtactttgttgttttatgctattaacatggatgttgtgagtttgttcatatattcatcctttttattttaagtgaatttgtattgcatcgatgtactct 11298463  T
Q  113 atcaatttaaatgaataaatatcattt 139  Q
    |||||||| ||| ||| ||| ||||||    
T  11298462 atcaatttgaataaatgaatgtcattt 11298436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 31712864 - 31712747
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt--gatatactctatcaatttaa 122  Q
    ||||||| |||||||| | ||| ||||||||||||  || |||||||  || | |||| ||||||||| ||||||||   ||| |||||||||||||| |    
T  31712864 ttttatgttattaacatggatgctgtgagtttgttcacatattcatcctttttgtttttagcgaattttcattgtatatcgatgtactctatcaatttga 31712765  T
Q  123 atgaataaatatcattta 140  Q
    |||||| |||||||||||    
T  31712764 atgaatgaatatcattta 31712747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 44410583 - 44410525
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||| | |||||||||||||| || ||||||||| ||||||||||||||||||||    
T  44410583 tgtactttattattttatgctattatcatgaatgttgtaagtttgtttgcaaattcatc 44410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 2025022 - 2024897
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtatt-----gatata 108  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||| || | |||| |||||||||| | |||||||     ||| ||    
T  2025022 tactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtattatatcgatgta 2024923  T
Q  109 ctctatcaatttaaatgaataaatat 134  Q
    |||||||||||| ||||||| |||||    
T  2024922 ctctatcaatttgaatgaatgaatat 2024897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 10952094 - 10952037
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    |||| |||||||||||||||||| || | |||||||||||||||||||| ||||||||    
T  10952094 tactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatca 10952037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 10960099 - 10960042
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    |||| |||||||||||||||||| || | |||||||||||||||||||| ||||||||    
T  10960099 tactctgtcattttatgctattatcatggatgttgtgagtttgtttgcagattcatca 10960042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 37612966 - 37613098
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| |||||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| | |||||||| |||      |||| |||||    
T  37612966 gtactttgccattttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttaacgaatttgaatttgtattgtatcgatat 37613065  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  37613066 actctatcaatttgaatgaatgaatatcgttta 37613098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 37659220 - 37659301
Alignment:
Q  59 ttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||| || | |||| ||||||||| |||||||| ||| ||||||| |||||| ||||||| |||||||||||    
T  37659220 ttgcagattcatcatttttgtttttagcgaattttcattgtatcgatgtactctaccaatttgaatgaatgaatatcattta 37659301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 13570486 - 13570434
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| ||||||| |||||||||||||||||||||||||| |||||| ||||    
T  13570486 aatttgtattgtatcgatatactctatcaatttaaatgaatgaatatcgttta 13570434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 14530721 - 14530601
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| ||||||||| | |||||||||||||||| | |||||||||||||| |  || |||||||| || | |||| |  |||| || |||| || ||| |    
T  14530721 gcttgtgtactttgccgttttatgctattaacatggatgttgtgagtttgctcacagattcatcatttttgtttttaatgaatctgtattgcatcgatgt 14530622  T
Q  108 actctatcaatttaaatgaat 128  Q
    ||||||||||||| |||||||    
T  14530621 actctatcaatttgaatgaat 14530601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 31202779 - 31202910
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtatt-----gatat 107  Q
    |||||||| |||||||| ||||||||| | ||||||||||||||||  || ||||||| ||| | |||| |||||||||| | |||||||     ||| |    
T  31202779 gtactttgccattttatactattaacatggatgttgtgagtttgttcacagattcatc-cttttgtttttagcgaatttggatttgtattatatcgatgt 31202877  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  31202878 actctatcaatttgaatgaatgaatatcgttta 31202910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5917561 - 5917510
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtga 52  Q
    |||||| ||| ||||||||||||||||||||||||||||| | |||||||||    
T  5917561 tgtgtaggctattgtactttgtcattttatgctattaacatggatgttgtga 5917510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 8054620 - 8054481
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||| | | ||||||||||   |||  || |||||||  || | |||| |||||||||| ||| ||    
T  8054620 tgtgtaggcatttgtaccttgccgttttatgctattaaaatggatgttgtgagcgggttcacatattcatcctttttgtttttagcgaatttgtattata 8054521  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| || ||||||||||| ||||||| |||||||||||    
T  8054520 tcgatgtattctatcaatttgaatgaatgaatatcattta 8054481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9270323 - 9270449
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| ||||||||||| |||||| | ||||||||||| | ||  || |||||||  |  | |||| ||||||||| |||| ||    
T  9270323 tgtgtaggcatttgtactttgccattttatgctgttaacatggatgttgtgagtct-ttcacatattcatccttgatgtttttagcgaatttacattata 9270421  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    | ||| |||||||||||||| |||||||    
T  9270422 tcgatgtactctatcaatttgaatgaat 9270449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 10148266 - 10148392
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||  || |||||||| || | |||| |||||      ||||| ||||||| ||| |    
T  10148266 gtactttgtcgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaattaggatttgtattgtatcgatgt 10148365  T
Q  108 actctatcaatttaaatgaataaatat 134  Q
    | ||||||||||| ||||||| |||||    
T  10148366 aatctatcaatttgaatgaatgaatat 10148392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 30026680 - 30026549
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt-gtattg-----atata 108  Q
    ||||||||  |||||||||||||||| | ||  ||||||||||||  || |||||||  || | |||| |||||||||| ||| ||||||     |||||    
T  30026680 tactttgttgttttatgctattaacatggatactgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcaatata 30026581  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| |||||||||||||| ||||    
T  30026580 ctctatcaatttgaatgaataaatatcgttta 30026549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 32778771 - 32778645
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||| | |  ||||||||||||||| |||||||||||| || | |||| |||||      ||||| ||||||| ||| |    
T  32778771 gtactttgccgttttatgctattaatatggttgttgtgagtttgttcgcaaattcatcatttttgtttttagcgactttggatttgaattgtatcgatgt 32778672  T
Q  108 actctatcaatttaaatgaataaatat 134  Q
    ||||||||||||| ||| ||| |||||    
T  32778671 actctatcaatttgaataaatgaatat 32778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 32920948 - 32921063
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||| |||| |||| ||||||||||| | ||||||||||||||||   | |||||||  || | |||| || ||||||| |||| |||    
T  32920948 tgtaggcttatgtactatgtcgttttgtgctattaacatggatgttgtgagtttgttcagagattcatcctttttgtttttagtgaatttgtattgcatt 32921047  T
Q  103 gatatactctatcaat 118  Q
    ||| ||||||||||||    
T  32921048 gatgtactctatcaat 32921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 34365880 - 34365939
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    ||||||| ||| ||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  34365880 tgtacttcgtcgttttatgctattaacataaatattgtgagtttgtttgcagattcatca 34365939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 41362073 - 41362195
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca-cttcttttttcagcg------aatttgcattgtattgatatactctatcaa 117  Q
    |||||||||||||||| | ||||||||||||||||   | |||||||  ||| |||||| ||||      |||||| ||||||||||| |||||||||||    
T  41362073 ttttatgctattaacatggatgttgtgagtttgttcatagattcatcctcttttttttttagcgtaaatgaatttgtattgtattgatgtactctatcaa 41362172  T
Q  118 tttaaatgaataaatatcattta 140  Q
    ||| ||||||| |||||| ||||    
T  41362173 tttgaatgaatgaatatcgttta 41362195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 134
Target Start/End: Original strand, 23767065 - 23767174
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttc-agcgaatttgcattgtattgatatactctatcaatttaaa 123  Q
    |||||||||| ||||| | ||| || |||||||||  || ||||||| ||| ||| ||| ||||||||| |||||||||||| |||||||| ||||| ||    
T  23767065 ttttatgctactaacatggatgctgggagtttgttcacagattcatc-cttttttattctagcgaattttcattgtattgatgtactctattaatttgaa 23767163  T
Q  124 tgaataaatat 134  Q
    ||||| |||||    
T  23767164 tgaatgaatat 23767174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 14600497 - 14600365
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcg------aatttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||   | |||||||  || | |||| ||||      |||||| ||||||| ||| |    
T  14600497 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatgt 14600398  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||| |||||||||||||| ||||    
T  14600397 actctattaatttgaatgaataaatatcgttta 14600365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 28296914 - 28296782
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||| ||||||||||||  || ||||| |  || | |||| |||||||||| |||      |||| ||| |    
T  28296914 gtactttgccgttttatgctattaacatggatgctgtgagtttgttcacagattcaacctttttgtttttagcgaatttggatttgtattgtatcgatgt 28296815  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||||||||    
T  28296814 actctatcaatttgaatgaatgaatatcattta 28296782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 11162217 - 11162261
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  11162217 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 11162261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16809165 - 16809292
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||| ||||||||||  ||||||| ||||||||   ||| |||||||||||  ||| |||||||| || | ||||   |||||||||| | ||    
T  16809165 tgtgtaggcttctgtactttgttgttttatgttattaacaaagatgatgtgagtttgtacgcagattcatcatttttgttttttacgaatttgcactata 16809264  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
     | ||||||||||||||||| ||||||||    
T  16809265 -tcatatactctatcaatttgaatgaata 16809292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 26673501 - 26673449
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| || |||| ||||||||||||||||||||||||||  ||||||||||    
T  26673501 aatttgtatcgtatcgatatactctatcaatttaaatgaatggatatcattta 26673449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 45311029 - 45310903
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    |||| |||||| ||||||| |||||||||| | ||||| |||| | ||  | |||||||| || | |||| ||| || ||| || |||| |||||||| |    
T  45311029 tgtattttgtcgttttatgttattaacacggacgttgt-agttagcttcgagattcatcatttttgtttttagcaaaattgtatagtatcgatatacttt 45310931  T
Q  113 atcaatttaaatgaataaatatcattta 140  Q
    |||||||| ||||||| |||||||||||    
T  45310930 atcaatttgaatgaattaatatcattta 45310903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 5526131 - 5526264
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca------ttgtattgata 106  Q
    ||||| ||||| ||||||||||||||||   ||| || |||||||||  || |||||||  || | |||| |||||||||| |      |||||| |||     
T  5526131 tgtaccttgtcgttttatgctattaacatagatgctgcgagtttgttcacatattcatcctttttatttttagcgaatttgaacttatattgtatcgatg 5526230  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| |||||||||||||| ||||    
T  5526231 tactctatcaatttgaatgaataaatatcgttta 5526264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 9501977 - 9502031
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| |||||| |||||    
T  9501977 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttac 9502031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 10632920 - 10632874
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||||| ||||||||| ||||||||| || |||||||    
T  10632920 ttttatgctattaacatgaatgttgtaagtttgtttccagattcatc 10632874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 15286749 - 15286699
Alignment:
Q  90 tttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||  || |||||||||||||||||||||| |||||||||||    
T  15286749 tttgtattgtataaatgtactctatcaatttaaatgaatgaatatcattta 15286699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 15467118 - 15467068
Alignment:
Q  90 tttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||  || |||||||||||||||||||||| |||||||||||    
T  15467118 tttgtattgtataaatgtactctatcaatttaaatgaatgaatatcattta 15467068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 43936968 - 43936847
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| || ||||||| |||      |||| ||| ||||||||||||    
T  43936968 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatctactctatcaat 43936869  T
Q  119 ttaaatgaataaatatcattta 140  Q
    |  |||||||||||||| ||||    
T  43936868 tcgaatgaataaatatcgttta 43936847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Original strand, 2120554 - 2120591
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcattt 139  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  2120554 tgatttactctatcaatttaaatgaataattatcattt 2120591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 7579567 - 7579522
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  7579567 attgtatcgatgtactctatcaatttgaatgaatgaatatcattta 7579522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 10338630 - 10338585
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||    
T  10338630 gtactttgccgttttatgctattaacatggatgttgtgagtttgtt 10338585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 31874393 - 31874434
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgag 53  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  31874393 ttgtactttgtcgttttatgctattaacatggatgttgtgag 31874434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 38545528 - 38545483
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| |||||||||||||||||| ||||||| |||||| ||||    
T  38545528 attgtatcgatatactctatcaatttgaatgaatgaatatcgttta 38545483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 140
Target Start/End: Complemental strand, 5917509 - 5917473
Alignment:
Q  104 atatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  5917509 atatactctatcaatttcaatgaatgaatatcattta 5917473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 12329958 - 12330002
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  12329958 tactttgtcgttttatgctattaacacggatgctgtgaatttgtt 12330002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 12964183 - 12964231
Alignment:
Q  23 cattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||| |||||||| |||| ||||||||||||| ||| |||||||    
T  12964183 cattttatgatattaacatgaatattgtgagtttgttcgcagattcatc 12964231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 14544714 - 14544678
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcatt 138  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  14544714 tgatatactctatcaatttgaatgaatgaatatcatt 14544678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 32256526 - 32256414
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||| |||||||| | ||||||| |||||| | | ||| ||||||||||||  || |||||||  ||   |||| ||||||||| |||||||| ||| |    
T  32256526 gctttagtactttgccgttttatgttattaatatggatgatgtgagtttgttcacagattcatccttttcgtttttagcgaattttcattgtatcgatgt 32256427  T
Q  108 actctatcaattt 120  Q
    ||||| |||||||    
T  32256426 actctgtcaattt 32256414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 33526796 - 33526832
Alignment:
Q  104 atatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  33526796 atatattctatcaatttaaatgaatgaatatcattta 33526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 39067409 - 39067357
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| || |||| ||||||||||||||||||||| |||| |||||| ||||    
T  39067409 aatttgtatagtatcgatatactctatcaatttaaaagaatgaatatcgttta 39067357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 5e-33; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8644530 - 8644669
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgt 99  Q
    |||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||| ||| |||||||  ||||| |||| || |||||||||||||    
T  8644530 tgtgtaggcttttgtactttgtcgttttatgctattaacatggatgttgtgagtttgttcgcagattcatc-tttcttgtttttagtgaatttgcattgt 8644628  T
Q  100 attgatatactctatcaatttaaatgaataaatatcattta 140  Q
    || ||| |||||||||||||| ||||||| |||||||||||    
T  8644629 atcgatgtactctatcaatttgaatgaattaatatcattta 8644669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20496495 - 20496634
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||| | |||||||||||||| | | |||||||||||||||| ||| |||||||  || | |||| |||||||||||||||||    
T  20496495 tgtgtaggcttttgtactttgccgttttatgctattaatatggatgttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttgcattgta 20496594  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || ||| |||||||||| ||||||| |||||||||||    
T  20496595 tcaatgtacgctatcaatttgaatgaatgaatatcattta 20496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 31748259 - 31748392
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | |||||||||| |||||  || |||||||  || | |||| |||||||||||||| ||    
T  31748259 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcttgttcacagattcatcctttttgtttttagcgaatttgcattata 31748358  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||||||||||| |||||||||||||    
T  31748359 tcgatgtactctatcaatttgaatgaataaatat 31748392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 548673 - 548545
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||  || |||||||  || | ||||  ||||||||||||| ||||||| |||||    
T  548673 ttgtactttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttattttttgcgaatttgcattatattgatgtactc 548574  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||| ||| |||||||||||    
T  548573 tatcaatttgaatcaatgaatatcattta 548545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 4921694 - 4921567
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    |||| |||||| |||||||||||||||| ||||||| ||||||||||  || |||||||| || | |||| ||||| |||| || |||| ||| ||||||    
T  4921694 tgtattttgtcgttttatgctattaacatgaatgttatgagtttgttcacagattcatcatttttatttttagcgagtttgtatggtatcgatgtactct 4921595  T
Q  113 atcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||| |||||| ||||    
T  4921594 atcaatttaaatgaatgaatatcgttta 4921567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 4663632 - 4663499
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||||| || |||||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  4663632 tgtgtaagctttagtactatgccattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttatttttagcgaattttcattgta 4663533  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| ||||||| |||||| ||||||| |||||    
T  4663532 tcgatgtactctaccaatttgaatgaatgaatat 4663499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 5417036 - 5416898
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||||||||||||||| | |||||||||||||||| | |||||||||||||||| | | |||||||| || | |||| ||| || |||  |||||    
T  5417036 tgtgtatgcttttgtactttgccgttttatgctattaacatggatgttgtgagtttgttcgtagattcatcatttttgtttttagcaaaattgtgttgta 5416937  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
     | || |||||||| ||||| ||||||| |||||||||||    
T  5416936 -tcatgtactctattaatttgaatgaatgaatatcattta 5416898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8633008 - 8632875
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||||||| |||||||||||| ||||||||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  8633008 tgtgtaggcatttgtactttgtcatttcatgctattaacatgaatgttgtgagcctgttcacagattcatcttttttgtttttagcgaatttgcattata 8632909  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||| | ||||||| ||||||| |||||    
T  8632908 tcgatgtactatttcaatttgaatgaatgaatat 8632875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 904571 - 904709
Alignment:
Q  2 gtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    ||||| |||||||||||||||| |||||| ||||||||| |||| ||||||||||||| ||  |||||||| || | |||| ||| || ||  |||||||    
T  904571 gtgtaggcttttgtactttgtcgttttatactattaacatgaatattgtgagtttgttcgccgattcatcatttttgtttttagcaaactttaattgtat 904670  T
Q  102 tgatatactctatcaatttaaatgaataaatatcattta 140  Q
     ||| ||||  |||||||| ||| |||| ||||||||||    
T  904671 cgatgtactgcatcaatttgaataaatatatatcattta 904709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 13233908 - 13233787
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    |||| |||||| |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| |||||||||| ||| ||||||||||||||    
T  13233908 tgtattttgtcgttttatgctattaacatggatgttgtgagcctgttcacatattcatcctttttgtttttagcgaatttgtattatattgatatactct 13233809  T
Q  113 atcaatttaaatgaataaatat 134  Q
    |||||||| ||| ||| |||||    
T  13233808 atcaatttgaattaatgaatat 13233787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 23843226 - 23843097
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||| | ||||||||||||| || | ||||||||||  ||||  || |||||||| || | |||| |||||||||||||| ||| ||| ||||    
T  23843226 tttgtaccttgccgttttatgctattagcatggatgttgtgagcatgttcacagattcatcatttttgtttttagcgaatttgcattatatggatgtact 23843127  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| ||||| |||||    
T  23843126 ctatcaatttgaatgaatgaatattattta 23843097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 34020907 - 34021032
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||||| |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| |||||||||| |||| ||     
T  34020907 tgtaggcttatgtactttgtcgttttatgctattaacatgtatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgtattgcatc 34021006  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||| | |||||||    
T  34021007 gatgtactctatcaatatgaatgaat 34021032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10744884 - 10745023
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | ||||||||||||| || | ||| ||||||||||||  ||||||||||  || | |||| | |||||||  ||||||    
T  10744884 tgtgtaggctttagtactttgccgttttatgctattagcatggatgatgtgagtttgttcacaaattcatcctttttgtttttaacgaatttcaattgta 10744983  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||||||| ||||| |||||    
T  10744984 tcgatgtactctaccaatttgaatgaatgaatataattta 10745023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11426247 - 11426381
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||  |||||||||||||||| | ||| ||||||  ||||   | |||||||  || | |||| |||||||||||||| ||    
T  11426247 tgtgtaggcatttgtactttgttgttttatgctattaacatggatgatgtgagcctgttcatagattcatcctttttgtttttagcgaatttgcattata 11426346  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| |||||| ||||||||||||||| ||||||    
T  11426347 tcgatgtactctttcaatttaaatgaatgaatatc 11426381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 136
Target Start/End: Original strand, 19760100 - 19760225
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||  ||||  || ||| |||  || | |||| | |||||||||||| ||| ||| ||||    
T  19760100 tttgtaccttgccattttatgctattaacatgaatgttgtgagcctgttcacatatttatcctttttgtttttatcgaatttgcattatatcgatgtact 19760199  T
Q  111 ctatcaatttaaatgaataaatatca 136  Q
    |||||||||| | ||||| |||||||    
T  19760200 ctatcaatttgagtgaatgaatatca 19760225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 33541341 - 33541212
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||||| ||| |||||||||||| | ||||  ||||||||||  || |||||||| || | |||| |||||||||  |||| |||    
T  33541341 tgtaggcttatgtactttgtcgtttcatgctattaacatggatgtcatgagtttgttcacatattcatcatttttgtttttagcgaatttatattgcatt 33541242  T
Q  103 gatatactctatcaatttaaatgaataaat 132  Q
     || ||||||| |||||| |||||||||||    
T  33541241 aatgtactctaacaatttgaatgaataaat 33541212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12576293 - 12576154
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||||| |||||||||||||||| | ||  ||||||  ||||  ||||||||||  || | |||| |||||||||||||| ||    
T  12576293 tgtgtaggcatttgtaccttgtcgttttatgctattaacatggatactgtgagcctgttcacaaattcatcctttttgtttttagcgaatttgcattata 12576194  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||||| ||||||| ||||||| |||||| ||||    
T  12576193 tctatgtactctttcaatttgaatgaatgaatatctttta 12576154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 12654110 - 12653977
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    |||| |||||| |||||||||||||||| | ||| |||||||||||| ||| |||||||| || | |||| |||||      | ||| ||||||| |||     
T  12654110 tgtattttgtcgttttatgctattaacatggatgatgtgagtttgttcgcagattcatcatttttgtttttagcgactttggaattgtattgtatcgatg 12654011  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  12654010 tactctatcaatttgaatgaatgaatatcgttta 12653977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 31804526 - 31804655
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttc-agcgaatttgcattgtattgatat 107  Q
    |||| |||||||| | |||||||||||||||| | ||| ||||||||| ||  || ||| ||    ||||||||| |||||||||  ||| ||| ||| |    
T  31804526 ctttagtactttgccgttttatgctattaacatggatgctgtgagtttcttcacatatttata---tcttttttctagcgaatttttattatatcgatgt 31804622  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||||||||| ||||    
T  31804623 actctatcaatttaaatgaataaatatcgttta 31804655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 8693462 - 8693330
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| || ||||||| |||      |||| ||| |    
T  8693462 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttggatttgtattgtatcgatgt 8693363  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| |||||||||||||| ||||    
T  8693362 actctatcaatttgaatgaataaatatcgttta 8693330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 15127942 - 15127802
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgt 99  Q
    |||||| |||| |||||| |||  ||||||| |||||||| | ||||||||| |||||| | | ||| |||  || || |||| ||||||||||| ||||    
T  15127942 tgtgtaggcttctgtactctgttgttttatgttattaacatggatgttgtgaatttgttcgtagattgatccttttttgtttttagcgaatttgcgttgt 15127843  T
Q  100 attgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||| || ||||||||| |||| ||||||| ||||| |||||    
T  15127842 attaatgtactctatcgatttgaatgaatgaatattattta 15127802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22530515 - 22530623
Alignment:
Q  16 actttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatc 115  Q
    |||||| ||||||||||||||||||  ||   |||||||||||| ||| |||||||| || | |||| || ||||||| ||||||| ||| |||||||      
T  22530515 actttgccattttatgctattaacataaagaatgtgagtttgttcgcatattcatcatttttgtttttagtgaatttgtattgtatcgatgtactctaca 22530614  T
Q  116 aatttaaat 124  Q
    |||||||||    
T  22530615 aatttaaat 22530623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32804597 - 32804655
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||| |||||||||||||||  |||||||||||||||  | ||||||||||||||||    
T  32804597 tgtgtaggcttttgtactttgttgttttatgctattaacttggatgttgtgagtttgtt 32804655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 31705574 - 31705627
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |||||| ||||    
T  31705574 gaatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgttta 31705627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 3359086 - 3359130
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||    
T  3359086 tttatgctattaacatgaatgtcgtgagtttgttcgcaaattcat 3359130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 5545065 - 5545121
Alignment:
Q  84 agcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||||  || |||||||||||||| ||||||| |||||||||||    
T  5545065 agcgaatttacattgtatcaatgtactctatcaatttgaatgaatgaatatcattta 5545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 20845320 - 20845368
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||||| |||||||||||||||| | ||||||||||| ||||    
T  20845320 tttgtactttgtcgttttatgctattaacatggatgttgtgagtctgtt 20845368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 29920707 - 29920663
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||    
T  29920707 tactttgtcgttttatgctattaacatggatgttgtgagtttgtt 29920663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 2488533 - 2488584
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| |||||||||||||| |||||||||||||| ||||    
T  2488533 atttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgttta 2488584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7049547 - 7049598
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtga 52  Q
    |||||| || ||||||||||||| |||||||||||||||| | |||||||||    
T  7049547 tgtgtaggcatttgtactttgtcgttttatgctattaacatggatgttgtga 7049598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12652013 - 12651942
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    |||||| | ||||||| |||||||||||||||||||| || ||||| |  ||||||||| | ||||||||||    
T  12652013 tgtgtaggtttttgtaatttgtcattttatgctattagcatgaatgctacgagtttgttcgtaaattcatca 12651942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 4660757 - 4660803
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  4660757 tgtactttgtcgttttatgctattaacatggatgatgtgagtttgtt 4660803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 6127858 - 6127904
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||| |||||| | ||| ||||||||||||||||||||||||    
T  6127858 ttttatgcttttaacatggatgatgtgagtttgtttgcaaattcatc 6127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 23101200 - 23101154
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||    
T  23101200 tgtactttgccgttttatgctattaacatggatgttgtgagtttgtt 23101154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 23588021 - 23588115
Alignment:
Q  34 attaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaat 128  Q
    ||||||| | ||||||||| || ||||||||||| |||| || | |||| |||||||| | ||||||| ||| |||| | ||||||| |||||||    
T  23588021 attaacatggatgttgtgaattagtttgcaaatttatcatttttatttttagcgaattagtattgtatcgatgtactatgtcaatttgaatgaat 23588115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 30813398 - 30813519
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| |||||||||| |||      |||| ||| ||||||||||||    
T  30813398 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaat 30813497  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||||||| |||||| ||||    
T  30813498 ttgaatgaatgaatatcgttta 30813519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 2304549 - 2304496
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    |||||| |||| || ||| |||||||||||||||||||||| |||||| |||||    
T  2304549 aatttgtattgcatcgatgtactctatcaatttaaatgaatgaatatcgtttac 2304496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 5527352 - 5527307
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||| |||||||||||||  ||||||| |||||||||||    
T  5527352 attgtattgatgtactctatcaattcgaatgaatgaatatcattta 5527307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 6295961 - 6295908
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| ||||| |||||    
T  6295961 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattattta 6295908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 6302771 - 6302718
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| ||||| |||||    
T  6302771 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatattattta 6302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 135
Target Start/End: Complemental strand, 9043831 - 9043794
Alignment:
Q  98 gtattgatatactctatcaatttaaatgaataaatatc 135  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  9043831 gtatcgatatactctatcaatttaattgaataaatatc 9043794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 28943579 - 28943636
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||  ||||||| |||||||| | || ||||||||||||||||| |||||||    
T  28943579 gtactttgtggttttatgttattaacatgtattttgtgagtttgtttgcagattcatc 28943636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 34185532 - 34185495
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcattt 139  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  34185532 tgatatactctatcaatttgaatgaatgaatatcattt 34185495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 7076845 - 7076881
Alignment:
Q  20 tgtcattttatgctattaacacgaatgttgtgagttt 56  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  7076845 tgtcattttatgctattaacatgaatgttttgagttt 7076881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 13871405 - 13871338
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||||||||||| | ||||||||||||||||  || ||||||| ||| | |||| ||||||||||    
T  13871405 ttttatgctattaacatggatgttgtgagtttgttcacagattcatc-cttttgtttttagcgaatttg 13871338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16913627 - 16913679
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgag 53  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||    
T  16913627 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgag 16913679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 83)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25622856 - 25622717
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||| | |||||||||||||||| | |||||||||||||||| ||| |||||||  || | |||| ||||||||| |||||||    
T  25622856 tgtgtaggcttttgtactttgacgttttatgctattaacatggatgttgtgagtttgttcgcatattcatcctttttgtttttagcgaatttacattgta 25622757  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||||||||||| ||| |||||||    
T  25622756 tcgatgtactctatcaatttaaatgaatgaatgtcattta 25622717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 11931174 - 11931313
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||| | |||||||||||||||| | |||||||||||||||| ||| ||||||   || | |||| |||||||||||||| ||    
T  11931174 tgtgtaggcttttgtactttgccgttttatgctattaacatggatgttgtgagtttgttcgcagattcattctttttatttttagcgaatttgcattata 11931273  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||| ||||||||| ||||||| |||||||||||    
T  11931274 tcgatgtactttatcaatttgaatgaatgaatatcattta 11931313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19953840 - 19953979
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | |||||||||||| | ||||| |||||||||| | ||||| |||||||||| | | |||||||| || | |||| |||||||||||||||||    
T  19953840 tgtgtaggtttttgtactttgccgttttaggctattaacatggatgttatgagtttgttcggagattcatcatttttgtttttagcgaatttgcattgta 19953939  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | |||||||||||||||||| || |||| |||||||||||    
T  19953940 tagatatactctatcaatttgaaagaatgaatatcattta 19953979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13268874 - 13269013
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||||||||||||   ||||||| |||||||| | ||||| |||||||||| | | |||||||| || | |||| |||||||||||||||||    
T  13268874 tgtgtaagcttttgtactttgctgttttatgatattaacatggatgttatgagtttgttcgtagattcatcatttttgtttttagcgaatttgcattgta 13268973  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||||||||||||| ||||||| |||||||||||    
T  13268974 tcaatgtactctatcaatttgaatgaatgaatatcattta 13269013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37883955 - 37884094
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||| ||||||||||||  || |||||||| || | |||| ||||||||| |||||||    
T  37883955 tgtgtaggctttagtactttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaattttcattgta 37884054  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||| ||||||||| ||||||| |||||| ||||    
T  37884055 ttgatgtactatatcaatttgaatgaatgaatatcgttta 37884094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 12366170 - 12366310
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||||||| || |||||||||||||||| | |||||| ||| |||||  || |||||||  || | |||| ||||||||| |||||||    
T  12366170 tgtgtaggctttagtactttttcgttttatgctattaacatggatgttgagaggttgttcacatattcatcctttttgtttttagcgaattttcattgta 12366269  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    | ||| |||||||||||||| ||||||| ||||||||||||    
T  12366270 tcgatgtactctatcaatttgaatgaatgaatatcatttac 12366310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 6090191 - 6090318
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||| ||||||||||| | ||||||||||||| || | ||||||||| | ||||  ||||||||||  || | |||| |||||||||||||| ||    
T  6090191 tgtgtatgcatttgtactttgccgttttatgctattagcatggatgttgtgaatctgttcacaaattcatcctttttgttttgagcgaatttgcattata 6090290  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    ||||| |||||| ||||||| |||||||    
T  6090291 ttgatgtactctttcaatttgaatgaat 6090318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 16720660 - 16720521
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||||||||||||||||||||||||||| | ||| ||||||| ||||  ||||||||||  || | |||| ||| |||||||||| ||    
T  16720660 tgtgtaggcatttgtactttgtcattttatgctattaacatggatgatgtgagtctgttcacaaattcatcctttttatttttagcaaatttgcattata 16720561  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | | | || | |||||||||| |||||| |||||||||||    
T  16720560 tcgttgtattatatcaatttacatgaatgaatatcattta 16720521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 44441689 - 44441820
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||||||||||| | ||||| |||||||||| | ||| | |||||||||| ||| ||||||| ||| | |||| |||||||||||| |||||  || ||    
T  44441689 cttttgtactttgccgttttaagctattaacatggatgctatgagtttgttcgcagattcatcccttttgtttttagcgaatttgcaatgtatcaatgta 44441788  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
     ||||||||||| ||| |||||||||||||||    
T  44441789 ttctatcaatttgaatcaataaatatcattta 44441820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 9715355 - 9715221
Alignment:
Q  2 gtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    ||||| |||||||||||||||| || |||| ||||||||   |||||||||||||||| | | |||||||  || | |||| ||||||||||||||||||    
T  9715355 gtgtaggcttttgtactttgtcgttatatgttattaacaaagatgttgtgagtttgttcgtagattcatcctttttgtttttagcgaatttgcattgtat 9715256  T
Q  102 tgatatactctatcaatttaaatgaataaatatca 136  Q
     | | |||||||||||||| ||| ||| |||||||    
T  9715255 cggtgtactctatcaatttgaataaatgaatatca 9715221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15673780 - 15673660
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||| |||| | |||||||||||||||| | ||||||||||||||||| || |||||||  || | |||| ||||||||| |||||||    
T  15673780 tgtgtaggctttagtattttgccgttttatgctattaacatggatgttgtgagtttgttt-cagattcatcctttttgtttttagcgaattttcattgta 15673682  T
Q  101 ttgatatactctatcaatttaa 122  Q
    | ||| ||||||||||||||||    
T  15673681 tcgatgtactctatcaatttaa 15673660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 15920188 - 15920315
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    ||||||||| | ||||||||||||||||   |||||| |||||||||  || |||||||  || | |||| || ||||||| ||||||| ||| ||||||    
T  15920188 tgtactttgccgttttatgctattaacattgatgttgcgagtttgttcacagattcatcttttttgtttttagtgaatttgtattgtatcgatgtactct 15920287  T
Q  113 atcaatttaaatgaataaatatcattta 140  Q
    |||||||| ||||||| |||||||||||    
T  15920288 atcaatttgaatgaatgaatatcattta 15920315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34480267 - 34480406
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | |||||||||||||| |||||| ||||||||| | |||||||||||||||| ||| |||||||  || | || | || |||||| |||||||    
T  34480267 tgtgtaggtttttgtactttgtcgttttattctattaacatggatgttgtgagtttgttcgcatattcatcctttttgttcttagtgaatttacattgta 34480366  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
      | | |||||||||||||| || |||| |||||||||||    
T  34480367 ccggtgtactctatcaatttgaacgaatgaatatcattta 34480406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 43567175 - 43567313
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || ||||||| ||| | |||| |||||||||||| | ||    
T  43567175 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatc-cttttgtttttagcgaatttgcaatata 43567273  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||| ||||||| ||||||| |||||| ||||    
T  43567274 ttgatgtactctttcaatttgaatgaatgaatatctttta 43567313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 5071158 - 5071044
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| | |||||||||||||||| ||| |||||||  || | || | |||||||||| |||| || ||| |||||||||||||| |||    
T  5071158 ttttatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttgttattagcgaatttgtattgcatcgatgtactctatcaatttgaat 5071059  T
Q  125 gaataaatatcattt 139  Q
    |||| ||| ||||||    
T  5071058 gaatgaatgtcattt 5071044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26491603 - 26491737
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| | |||| ||||||||| | ||  ||||||||||||  ||||||||||  || | |||| ||||||||| |||||||    
T  26491603 tgtgtaggctttagtactttgtcgtgttatactattaacatggataatgtgagtttgttcacaaattcatcctttttgtttttagcgaattttcattgta 26491702  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| || ||||||||||| ||||||| ||||||    
T  26491703 tcgatgtattctatcaatttgaatgaatgaatatc 26491737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 3397789 - 3397664
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    ||||||||| ||||||||||| |||||||||||||||| |  |||||||||||||||  ||||||||||  || | |||| |  ||||||| |||| ||     
T  3397789 tgtatgcttatgtactttgtcgttttatgctattaacatggttgttgtgagtttgttcacaaattcatcctttttgtttttaaagaatttgtattgcatc 3397690  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
     || |||||||||||||| |||||||    
T  3397689 aatgtactctatcaatttgaatgaat 3397664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 11550400 - 11550339
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  11550400 tttttagcgaatttgcattgtattgatgtactctatcaatttgaatgaatgaatatcattta 11550339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 11798328 - 11798197
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgatat 107  Q
    |||||||||| |||||||||||||||| | |||||||||||||||| ||| |||||||  || | |||| |||      ||||||| ||||||| ||| |    
T  11798328 gtactttgtcgttttatgctattaacatggatgttgtgagtttgttcgcagattcatc-tttttatttttagcgactttgaatttgaattgtatcgatgt 11798230  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||||||| |||||| ||||    
T  11798229 actctatcaatttaaatgaatgaatatcgttta 11798197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 3390736 - 3390864
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||| || | |||| ||| |||||||||| ||| ||| |||||    
T  3390736 ttgtactttgccgttttatgctattaacatggatgatgtgagactgttcacatattcatcatttttgtttttagcaaatttgcattatatcgatgtactc 3390835  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  3390836 tatcaatttgaatgaatgaatatctttta 3390864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 25771758 - 25771886
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  25771758 ttgtactttgccgttttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 25771857  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  25771858 tatcaatttgaatgaatgaatatctttta 25771886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 27023940 - 27023812
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| |||||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||| ||| ||| ||| |||||    
T  27023940 ttgtactttgccattttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgtattatatcgatgtactc 27023841  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    |||| |||| |||||||||||||| ||||    
T  27023840 tatcgatttgaatgaataaatatctttta 27023812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 35353949 - 35354069
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| ||||||||||  |||||||||||||||| | ||||||||||||||||  ||  ||||||  || | |||| |||||||||| |||| || ||| |    
T  35353949 gcttatgtactttgttgttttatgctattaacatggatgttgtgagtttgttcacatgttcatcctttttgtttttagcgaatttgtattgcatcgatgt 35354048  T
Q  108 actctatcaatttaaatgaat 128  Q
    ||||||||||||| |||||||    
T  35354049 actctatcaatttgaatgaat 35354069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18141293 - 18141154
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||  |||| | |||||| || ||| |||| || | |||| ||| ||||||||||  |    
T  18141293 tgtgtaggcatttgtactttgccgttttatgctattaacatggatactgtgggcttgtttacagattaatcatttttgtttttagcaaatttgcattaca 18141194  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  18141193 tcgatgtactctatcaatttgaatgaatgaatatcattta 18141154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 25237143 - 25237004
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||| || |||| | ||||||| |||||||| | ||||||||||||||||  || ||| |||  ||    ||| | |||||||||||||||    
T  25237143 tgtgtaggcttttctattttgccgttttatgttattaacatggatgttgtgagtttgttcccagatttatccatttacgttttaacgaatttgcattgta 25237044  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | |||||||||||||||||| ||||||  |||||||||||    
T  25237043 tcgatatactctatcaatttgaatgaaagaatatcattta 25237004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28228524 - 28228663
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||| ||||||||| | ||||||||||   | | |||||||||||||||| ||||||| |||  || | |||| || ||||||||||| ||    
T  28228524 tgtgtaggcttttttactttgtcgtattatgctattgttatggatgttgtgagtttgttagcaaattaatcttttttgtttttagtgaatttgcattata 28228623  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| | |||||||||||| ||||||| ||||| |||||    
T  28228624 tcgatgttctctatcaatttgaatgaatgaatattattta 28228663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41177160 - 41177299
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| | |||||||||||| ||    
T  41177160 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttaacgaatttgcattata 41177259  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| ||||||| |||||| ||||    
T  41177260 tcgatttactctttcaatttgaatgaatgaatatctttta 41177299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 12705027 - 12705148
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||||| ||||||||||||||||  || |||||||| || | |||| |||||      ||||| ||||||| ||| ||||||||||||    
T  12705027 ttttatgctattaacacggatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaat 12705126  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||||||| |||||| ||||    
T  12705127 ttgaatgaatgaatatccttta 12705148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17118626 - 17118568
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||| || ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  17118626 tgtgtaggcgtttgtactttgtcgttttatgctattaacatgaatgttgtgagtttgtt 17118568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 33012377 - 33012510
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcg------aatttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  ||||||||||  || | |||| ||||      |||||| ||||||| |||     
T  33012377 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacaaattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatg 33012476  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  33012477 tactctatcaatttgaatgaatgaatatcgttta 33012510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 3465241 - 3465358
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| |||||||||||||||| | |||||||||| |||||  || ||| |||  || | |||| ||| |||||||||| ||| ||| ||||    
T  3465241 tttgtactttgtcgttttatgctattaacatggatgttgtgagcttgttcacagatttatcctttttatttttagcaaatttgcattatatcgatgtact 3465340  T
Q  111 ctatcaatttaaatgaat 128  Q
    || ||||||| |||||||    
T  3465341 ctttcaatttgaatgaat 3465358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 10589411 - 10589520
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctat 114  Q
    ||||||| | |||||||||||||||| | ||| ||||||||||||  || |||||||  ||   |||| |||| |||| |||||||| ||||||||||||    
T  10589411 tactttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatctttttcgtttttagcggattttcattgtatcgatatactctat 10589510  T
Q  115 caatttaaat 124  Q
    ||||||||||    
T  10589511 caatttaaat 10589520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 12183120 - 12183015
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    ||||||||||||||    ||||||||||||||||| ||| |||||||  || | |||| | | |||||| ||||||||||||||||||||||| || |||    
T  12183120 ttttatgctattaa----aatgttgtgagtttgttcgcagattcatctattttgtttttaacaaatttgtattgtattgatatactctatcaaattgaat 12183025  T
Q  125 gaataaatat 134  Q
    |||| |||||    
T  12183024 gaattaatat 12183015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 43929112 - 43928984
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||| ||||  ||||||||||  || | |||| ||||||||| |||| ||    
T  43929112 tgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgagtctgttcacaaattcatcctttttgtttttagcgaatttacattata 43929013  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
    | ||| ||||  |||||||| ||||||||    
T  43929012 tcgatgtacttgatcaatttgaatgaata 43928984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 9207144 - 9207029
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    ||||||| |||||||| ||||||||||||  ||||  || |||||||  || | |||| ||| |||||||||| ||| ||| ||||||||||||| ||||    
T  9207144 ttttatgttattaacatgaatgttgtgagcatgttcacatattcatcctttttgtttttagcaaatttgcattatatcgatgtactctatcaattcaaat 9207045  T
Q  125 gaataaatatcattta 140  Q
    |||| ||| |||||||    
T  9207044 gaatgaatgtcattta 9207029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 4878524 - 4878407
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt--gatatactctatcaatttaa 122  Q
    ||||||| |||||||| | ||| ||||||||||||  || |||||||  || | |||| ||||||||| ||||||||   ||| |||||||||||||| |    
T  4878524 ttttatgttattaacatggatgctgtgagtttgttcacatattcatcctttttgtttttagcgaattttcattgtatatcgatgtactctatcaatttga 4878425  T
Q  123 atgaataaatatcattta 140  Q
    |||||| |||||||||||    
T  4878424 atgaatgaatatcattta 4878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 17056273 - 17056223
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  17056273 cttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgtt 17056223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 17068720 - 17068670
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  17068720 cttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgtt 17068670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 17095290 - 17095240
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  17095290 cttttgtactttgccgttttatgctattaacatgaatgttgtgagtttgtt 17095240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 34471301 - 34471406
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga--atttgcattgtattgatatactctatcaatttaa 122  Q
    |||||||||||||||| | ||||||||||||||||  || |||||||| || | |||| |||||  ||||| ||||||| ||| ||||| |||||||| |    
T  34471301 ttttatgctattaacatggatgttgtgagtttgttcacatattcatcatttttgtttttagcgaggatttgtattgtatcgatgtactccatcaatttga 34471400  T
Q  123 atgaat 128  Q
    ||||||    
T  34471401 atgaat 34471406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3603287 - 3603420
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  3603287 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 3603386  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||  |||| ||| ||||| ||||||| |||||    
T  3603387 tcgaagtactatataaatttgaatgaatgaatat 3603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 4739660 - 4739792
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatata 108  Q
    ||||||||  |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||| ||| ||    
T  4739660 tactttgttgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgta 4739759  T
Q  109 ctctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||||| ||||||| |||||| |||||    
T  4739760 ctctatcaatttgaatgaatgaatatcgtttac 4739792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 10286793 - 10286673
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaatt 119  Q
    ||||||||||||||| | || || ||||||||||  ||||||||||| || | |||| ||| |||||| |||      |||||||| |||||||||||||    
T  10286793 tttatgctattaacatggatattttgagtttgttcacaaattcatcatttttgtttttagcaaatttggatttctattgtattgatgtactctatcaatt 10286694  T
Q  120 taaatgaataaatatcattta 140  Q
    | |||||||||||||| ||||    
T  10286693 tgaatgaataaatatcgttta 10286673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 5930725 - 5930861
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||| |||||| |||||||||||||| | | ||||||||||  ||||  | ||||||||  || | |||| ||||||||| |||| ||    
T  5930725 tgtgtaggcatttgtattttgtcgttttatgctattaatatggatgttgtgagcatgttcacgaattcatcctttttgtttttagcgaatttacattata 5930824  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcat 137  Q
    |  || |||||||||||||| ||| ||| ||||||||    
T  5930825 tcaatgtactctatcaatttgaataaatgaatatcat 5930861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 29543124 - 29543255
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgatata 108  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||  ||||||| |   || | |||| |||      ||||||| ||||||| ||| ||    
T  29543124 tactttgtcgttttatgctattaacacggatgttgttagtttgttcacaaattctttctttttgtttttagcaaatttgaatttgtattgtatcgatgta 29543223  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||| ||||    
T  29543224 ctctatcaatttgaatgaatgaatatcgttta 29543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 31908607 - 31908476
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatata 108  Q
    ||||||| | |||||||||||||||| ||||| ||||||||||||  || |||||||  || | |||| ||| |||||| |||      |||||||| ||    
T  31908607 tactttgccgttttatgctattaacatgaatgctgtgagtttgttcacagattcatcctttttatttttagcaaatttggatttctattgtattgatgta 31908508  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||| ||||    
T  31908507 ctctatcaatttgaatgaatgaatatcgttta 31908476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 31268899 - 31268789
Alignment:
Q  19 ttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttct-tttttcagcgaatttgcattgtattgatatactctatcaa 117  Q
    ||||| ||| ||||||||||||   ||||||| |||||||| |||||||| ||| || | ||||||| |||||||| ||||||||||| | || |||||     
T  31268899 ttgtcgtttaatgctattaacaaatatgttgttagtttgttcgcaaattcttcatttttgtttttca-cgaatttgtattgtattgatgtcctttatcag 31268801  T
Q  118 tttaaatgaata 129  Q
    ||||||||||||    
T  31268800 tttaaatgaata 31268789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 20560925 - 20560792
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| | |||||| ||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||| |||     
T  20560925 tgtactttgccgttttatactattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatg 20560826  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  20560825 tactctatcaatttgaatgaatgaatatcgttta 20560792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 36868337 - 36868470
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcg------aatttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | |||||||||||||||   || |||||||| || | |||| ||||      |||||  ||| ||| ||||    
T  36868337 tgtactttgccgttttatgctattaacatggatgttgtgagtttgtacacagattcatcatttttgtttttagcgaatttaaatttatattatatcgata 36868436  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  36868437 tactctatcaatttgaatgaatgaatatcgttta 36868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 45693900 - 45693822
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||||| | |||||| || | |||| ||||| ||||    
T  45693900 tactttgtcattttatgctattaacatagatgatgtgagtttgtttgcagaatcatcatttttgtttttagcgactttg 45693822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 132
Target Start/End: Complemental strand, 2251157 - 2251029
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||||||   |||||||||||||||| | |||| |||||||||||  | ||||||||  || | |||| |||||||||  ||||  |     
T  2251157 tgtaggcttatgtactttgcagttttatgctattaacatggatgtcgtgagtttgttcac-aattcatcctttttgtttttagcgaatttatattgcttc 2251059  T
Q  103 gatatactctatcaatttaaatgaataaat 132  Q
    ||| |||||||||||||| |||||||||||    
T  2251058 gatgtactctatcaatttgaatgaataaat 2251029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 12890908 - 12890776
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||| ||| |    
T  12890908 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgt 12890809  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||| ||| |||||| ||||    
T  12890808 actctatcaatttgaattaatgaatatcgttta 12890776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 23256418 - 23256304
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattgatatactctatcaatttaaa 123  Q
    ||||||| |||||||| | ||||||||||||||||| || |||| |  |||||||||| ||||| || | | || ||| |||||||  ||||||||| ||    
T  23256418 ttttatgatattaacatggatgttgtgagtttgtttacatattctt--cttctttttttagcgatttcgaatttatatcgatataccttatcaatttgaa 23256321  T
Q  124 tgaataaatatcattta 140  Q
    ||||| |||||||||||    
T  23256320 tgaatgaatatcattta 23256304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 44942616 - 44942748
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||  |||||      ||||| ||||||| ||| |    
T  44942616 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttatagcgaatttagatttgtattgtatcgatgt 44942715  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  44942716 actctatcaatttgaatgaatgaatatcgttta 44942748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 4604026 - 4603974
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||| ||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  4604026 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttac 4603974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 7581810 - 7581766
Alignment:
Q  96 ttgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||    
T  7581810 ttgtatcgatatactttatcaatttgaatgaataaatatcattta 7581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40125689 - 40125826
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | ||||  |||||||||| | ||| ||||||||||||  || ||||||   || | |||| | || |||| |||||||    
T  40125689 tgtgtaggctttagtactttgccgtttt--gctattaacatggatgatgtgagtttgttcacatattcattctttttgtttttaacggattttcattgta 40125786  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||||||||||||| ||||||| |||||||||||    
T  40125787 tctatgtactctatcaatttgaatgaatgaatatcattta 40125826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 28261696 - 28261570
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||||||||||||| ||||| || | ||||||||||||||||  |||||| |||  || | |||| | |||      ||||| ||||||| ||| |    
T  28261696 gtactttgtcattttatgttattaccatggatgttgtgagtttgttcacaaatttatcctttttgtttttatcgaatttggatttgtattgtatcgatgt 28261597  T
Q  108 actctatcaatttaaatgaataaatat 134  Q
    ||||||||||||| ||||||| |||||    
T  28261596 actctatcaatttgaatgaatgaatat 28261570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 34962705 - 34962654
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||| || |||||||||||||| ||||||| |||||||||||    
T  34962705 atttgtattgtatttatgtactctatcaatttgaatgaatgaatatcattta 34962654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 43696279 - 43696330
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||||||| |||||||||||||| ||||||| |||||| ||||    
T  43696279 atttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgttta 43696330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44167523 - 44167385
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||| ||||||  ||||  || ||| |||  || | |||| |||||||||||||| ||    
T  44167523 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgatgtgagcctgttcacagatttatcctttttgtttttagcgaatttgcattata 44167424  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| |||| || ||||||| |||||| ||||    
T  44167423 tcgatgtactctttcaa-ttgaatgaatgaatatctttta 44167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 20570289 - 20570367
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||||| ||||||||||||||||   ||| |||||||||||| ||| |||||||| || | |||| ||||| ||||    
T  20570289 tactttgtcgttttatgctattaacatagatgctgtgagtttgttcgcatattcatcatttttgtttttagcgattttg 20570367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27191145 - 27191011
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||  | |||||||||||||||| | |||   ||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  27191145 tgtgtaggcatttgtactttaccgttttatgctattaacatggatgccatgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 27191046  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| |||||| ||||||| ||||||| ||||||    
T  27191045 tcgatgtactctttcaatttgaatgaatgaatatc 27191011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27840959 - 27840825
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||  | |||||||||||||||| | |||   ||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  27840959 tgtgtaggcatttgtactttaccgttttatgctattaacatggatgccatgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 27840860  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| |||||| ||||||| ||||||| ||||||    
T  27840859 tcgatgtactctttcaatttgaatgaatgaatatc 27840825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 33852213 - 33852332
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgt----tgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    |||||||| || |||||||||||||||| |||||     |||||||||| ||||||||| |||   | | |||| ||| |||||| ||| | || |||||    
T  33852213 tgtactttatcgttttatgctattaacatgaatgaatgatgtgagtttgcttgcaaatttatcctatttgtttttagcaaatttgtatttttttaatata 33852312  T
Q  109 ctctatcaatttaaatgaat 128  Q
    || |||||||||||||||||    
T  33852313 ctatatcaatttaaatgaat 33852332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 102 - 136
Target Start/End: Original strand, 43711791 - 43711825
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatca 136  Q
    ||||||||||||||||||||||||||| |||||||    
T  43711791 tgatatactctatcaatttaaatgaatgaatatca 43711825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 7640035 - 7640002
Alignment:
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||| |||||||||||    
T  7640035 tactctatcaatttaaatgaatgaatatcattta 7640002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 12554008 - 12553971
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcattt 139  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  12554008 tgatatactctatcaatttgaatgaatgaatatcattt 12553971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 140
Target Start/End: Original strand, 15750179 - 15750212
Alignment:
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||||||||||||||||||    
T  15750179 tactttatcaatttaaatgaataaatatcattta 15750212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 19904834 - 19904879
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    |||||||||||||||| |||| || |||||||||||||| ||||||    
T  19904834 ttttatgctattaacatgaatattatgagtttgtttgcatattcat 19904879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 27096019 - 27096064
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||    
T  27096019 gtactttgccgttttatgctattaacatggatgttgtgagtttgtt 27096064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 29938613 - 29938646
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||||||| ||||||||||||||||||    
T  29938613 tttatgctattaacatgaatgttgtgagtttgtt 29938646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 33839177 - 33839132
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    |||||||||||||||| | ||||||||||||| || ||||||||||    
T  33839177 ttttatgctattaacatggatgttgtgagttttttcgcaaattcat 33839132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 4615333 - 4615369
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  4615333 gaatttgtattgtatagatatactctatcaatttaaa 4615369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 7072764 - 7072720
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||    
T  7072764 tactttgccgttttatgctattaacatggatgttgtgagtttgtt 7072720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 8064587 - 8064531
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    ||||||||||| |||||||||||||| ||  ||||||||||||| || ||| |||||    
T  8064587 tgtactttgtcgttttatgctattaaaacttatgttgtgagtttattcgcagattca 8064531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 15439881 - 15439929
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||| ||| ||| ||| || ||||||||||||||||||||||||||    
T  15439881 gaatttgtattatatcgatgtaatctatcaatttaaatgaataaatatc 15439929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17055999 - 17055971
Alignment:
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||||||||||    
T  17055999 tatcaatttaaatgaataaatatcattta 17055971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17068446 - 17068418
Alignment:
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||||||||||    
T  17068446 tatcaatttaaatgaataaatatcattta 17068418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 17074429 - 17074401
Alignment:
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||||||||||    
T  17074429 tatcaatttaaatgaataaatatcattta 17074401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 17074701 - 17074653
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||| | ||||||||||||| || ||||||||| ||||||||    
T  17074701 tttgtactttgccgttttatgctattaccatgaatgttgtaagtttgtt 17074653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25516794 - 25516846
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgag 53  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||    
T  25516794 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgag 25516846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 39481288 - 39481196
Alignment:
Q  48 tgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| |||||| || |||||||  || | |||| |||||||||||||| || |||| || | ||| ||||| ||||||| |||||||||||    
T  39481288 tgtgagcttgtttacacattcatcctttttgtttttagcgaatttgcattatactgatgtaatgtattaatttgaatgaatgaatatcattta 39481196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 8e-32; HSPs: 81)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 772745 - 772883
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||| ||||||||| | || ||||||| ||||| ||| |||||||  || | |||| |||||||||||||||||    
T  772745 tgtgtaggcttttgtactttgtcgttttatactattaacatggatattgtgagcttgttcgcatattcatcctttttgtttttagcgaatttgcattgta 772844  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    | ||| |||||||||||||||||||||| ||||||||||    
T  772845 tcgatgtactctatcaatttaaatgaatgaatatcattt 772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 35141473 - 35141336
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||||||||||||| |||||  ||||||  |||||||| | |||||||||||||||| ||| |||||||  || | |||| ||||||||||||||||||     
T  35141473 tgtatgcttttgtattttgttgttttatattattaacatggatgttgtgagtttgttcgcagattcatcctttttattttaagcgaatttgcattgtatc 35141374  T
Q  103 gatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||| |||||||||| ||||||||||| |||||||||||    
T  35141373 gatgtactctatcagtttaaatgaatgaatatcattta 35141336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 8319617 - 8319755
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||| |||| |||||| ||||||||||||||||||||||| | ||  ||||||| | ||  ||||||||||| || | |||| |||||||||||| | ||    
T  8319617 tgtgcatgcatttgtaatttgtcattttatgctattaacatggatactgtgagtctattcacaaattcatcatttttgtttttagcgaatttgcactata 8319716  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    | ||| |||||||||||||||||||||| ||||||||||    
T  8319717 tcgatgtactctatcaatttaaatgaatgaatatcattt 8319755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 46918708 - 46918840
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||||||||||||| | |||||||||||||||| | ||| |||||||||||| ||| |||||||  || | |||| | |||||||||||||||| |||||    
T  46918708 gcttttgtactttgccgttttatgctattaacatgtatgctgtgagtttgttcgcagattcatcctttttgtttttatcgaatttgcattgtatcgatat 46918807  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||| | ||||| ||||||| ||||| |||||    
T  46918808 actctgttaatttgaatgaatgaatataattta 46918840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28015659 - 28015798
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  28015659 tgtgtaggctttagtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaattttcattgta 28015758  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||||||| |||||| ||||    
T  28015759 tcgatgtactctaccaatttgaatgaatgaatatctttta 28015798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 30992635 - 30992497
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||| ||||||| ||| | ||||||||||||||||   ||||||||||| ||||  || ||||||| ||| | |||| |||||||||||||| ||    
T  30992635 tgtgtatgcatttgtaccttgccgttttatgctattaacatagatgttgtgagtctgttcacatattcatc-cttttgtttttagcgaatttgcattata 30992537  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  30992536 tcgatgtactctatcaatttgaatgaatgaatatcattta 30992497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 35362911 - 35362786
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||||||||| | | |||| ||||||||||| | || |||||||||| || ||| |||||||  || | |||| |||||||||||||||||| ||||||    
T  35362911 cttttgtacttagccgtttt-tgctattaacatggattttgtgagtttattcgcagattcatcctttttgtttttagcgaatttgcattgtatcgatata 35362813  T
Q  109 ctctatcaatttaaatgaataaatatc 135  Q
    |||||||||||||||||||| ||||||    
T  35362812 ctctatcaatttaaatgaatgaatatc 35362786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 34893409 - 34893548
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||  |||||||||||||||| | || |||||||||||||  || |||||||  |  | |||| ||||||||| ||||| |    
T  34893409 tgtgtaggctttagtactttgttgttttatgctattaacatggatattgtgagtttgttcacagattcatccttaatatttttagcgaattttcattgca 34893508  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  34893509 tcgatgtactctatcaatttgaatgaatgaatatcattta 34893548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 49167227 - 49167366
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  49167227 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgatgtgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 49167326  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| ||||||| |||||| ||||    
T  49167327 ttgatatactctttcaatttgaatgaatgaatatctttta 49167366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 15123766 - 15123676
Alignment:
Q  50 tgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| |||||||||||| || | |||| ||| ||||||| |||||||||| |||||||||||||| ||||||| |||||||||||    
T  15123766 tgagtttgttcgcaaattcatcatttttgtttttagcaaatttgctttgtattgatctactctatcaatttgaatgaatgaatatcattta 15123676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 38649170 - 38649036
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||| ||||||||||| | |||||||||||||||| ||| |||||||  || | |||| ||||||||| |||||||    
T  38649170 tgtgtaagctttagtactttgccgttttttgctattaacatggatgttgtgagtttgttcgcatattcatcctttttgtttttagcgaattttcattgta 38649071  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | ||| |||||||  ||||| ||||||| ||||||    
T  38649070 tcgatgtactctactaatttgaatgaatgaatatc 38649036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 18754007 - 18754136
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| ||||     |||||||  || | |||| |||||||||||||| ||| ||| ||||    
T  18754007 tttgtactttgtcgttttatgctattaacatgaatgttgtgagtctgttcaatgattcatcctttttgtttttagcgaatttgcattatatcgatgtact 18754106  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    || ||||||| ||||||| |||||| ||||    
T  18754107 ctttcaatttgaatgaatgaatatctttta 18754136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 29804489 - 29804364
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||| | |||||||||||||||| | |||| |||||||||||  || |||||||| || | |||| |||||||||| ||| |||     
T  29804489 tgtaggcttatgtactttgccgttttatgctattaacatggatgtcgtgagtttgttcacagattcatcatttttgtttttagcgaatttgtattatatc 29804390  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  29804389 gatgtactctatcaatttgaatgaat 29804364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 37399910 - 37400039
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| ||||||||||||||||   ||||||||||| ||||  |||||| | |  || | |||| ||||||||| |||| ||| ||||||||    
T  37399910 tttgtactttgtcgttttatgctattaacatagatgttgtgagtctgttcacaaatttagcttttttgtttttagcgaatttacattatatcgatatact 37400009  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| ||||| |||||    
T  37400010 ctatcaatttgaatgaatgaatataattta 37400039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36350469 - 36350581
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | ||||||||||||||||||||||||||||||| | |||||||||| |||||  ||||||||||  || | ||||   |||||||| ||| ||    
T  36350469 tgtgtaggtttttgtactttgtcattttatgctattaacatggatgttgtgaggttgttcacaaattcatcctttttattttttacgaatttgtattata 36350568  T
Q  101 ttgatatactcta 113  Q
    |||||||||||||    
T  36350569 ttgatatactcta 36350581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 35135005 - 35134875
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||||||||||||| ||||||| |||||  | | |||||||||||||||| ||| |||||||| || | |||| || ||||||||||||||| ||| ||    
T  35135005 cttttgtactttgtcgttttatgttattagtatggatgttgtgagtttgttcgcagattcatca-ttttatttttagtgaatttgcattgtatcgatgta 35134907  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    || |||  |||| ||||||| |||||||||||    
T  35134906 ctatattgatttgaatgaatgaatatcattta 35134875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 4621172 - 4621039
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  || |||||||  || | |||| | |||      ||||| ||||||| |||     
T  4621172 tgtactttgtcattttatgctattaacatgaatgttgtgagtttgttaacagattcatcctttttgtttttaacgaatttggatttgaattgtatcgatg 4621073  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  4621072 tactctatcaatttgaatgaatgaatatcgttta 4621039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 24470716 - 24470846
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatac 109  Q
    ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||  || || |||| |||||||||||||| ||| ||| |||    
T  24470716 tttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatccttttttatttttagcgaatttgcattatatcgatgtac 24470815  T
Q  110 tctatcaatttaaatgaataaatatcattta 140  Q
    ||| ||||||||||||||| |||||| ||||    
T  24470816 tctttcaatttaaatgaatgaatatctttta 24470846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 24475664 - 24475794
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatac 109  Q
    ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||  || || |||| |||||||||||||| ||| ||| |||    
T  24475664 tttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatccttttttatttttagcgaatttgcattatatcgatgtac 24475763  T
Q  110 tctatcaatttaaatgaataaatatcattta 140  Q
    ||| ||||||||||||||| |||||| ||||    
T  24475764 tctttcaatttaaatgaatgaatatctttta 24475794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 7986204 - 7986333
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| ||| |||||| ||| ||| ||| ||||    
T  7986204 tttgtactttgtcgttttatgctattaacatggatgttgtgagcctgttcacagattcatcttttttgtttttagcaaatttgtattatatcgatctact 7986303  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||| ||||    
T  7986304 ctatcaatttgaatgaatgaatatctttta 7986333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 11002145 - 11002278
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| |||||||||||||||||| ||||||||||||  ||||   | |||||||  || | |||| |||||||||||||| ||    
T  11002145 tgtgtaggcatttgtactttgccattttatgctattaacatgaatgttgtgagcctgttcatagattcatcctttttatttttagcgaatttgcattata 11002244  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||| | ||||| ||||||| |||||    
T  11002245 tcgatgtactcttttaatttgaatgaatgaatat 11002278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 47156697 - 47156826
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| ||||||| |||||||| | ||||||||||| ||||  |||||||||   || | |||| |||||||||||||| ||| ||| ||||    
T  47156697 tttgtactttgtcgttttatgttattaacatggatgttgtgagtctgttcacaaattcattctttttgtttttagcgaatttgcattatatcgatgtact 47156796  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    || | ||||| ||||||| |||||| ||||    
T  47156797 cttttaatttgaatgaatgaatatctttta 47156826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 17508996 - 17508862
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt------gcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||      | ||||||| |||     
T  17508996 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcgatg 17508897  T
Q  107 tactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||||||||||||| |||| ||||||||||||    
T  17508896 tactctatcaatttaaaagaatgaatatcatttac 17508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 17544218 - 17544352
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt------gcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||      | ||||||| |||     
T  17544218 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcgatg 17544317  T
Q  107 tactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||||||||||||| |||| ||||||||||||    
T  17544318 tactctatcaatttaaaagaatgaatatcatttac 17544352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23732205 - 23732067
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||||||||||||||||| |||||||||||||| |   ||| |||||||||||| ||| |||||||  || | || |   ||||||| |||| ||    
T  23732205 tgtgtatgcttttgtactttgtcgttttatgctattaaaattgatg-tgtgagtttgttcgcagattcatcctttttgttcttgacgaatttacattata 23732107  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || |||| ||||||||||||||||| |||||||||||    
T  23732106 tcaatgtactttatcaatttaaatgaatgaatatcattta 23732067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26017470 - 26017331
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||| ||||  || |||||||  || | |||| || ||||||  ||| ||    
T  26017470 tgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgtttttagtgaatttatattata 26017371  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  26017370 tcgatgtactctatcaatttgaatgaatgaatatcattta 26017331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 37375847 - 37375715
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattg----atat 107  Q
    ||||||||||| |||||||||||||||| | ||| ||||||||||||  || ||||||| ||| | |||| |||||||||| | ||||||||    || |    
T  37375847 tgtactttgtcgttttatgctattaacatggatgctgtgagtttgttcacatattcatcccttttgtttttagcgaatttggatttgtattgtatcatgt 37375748  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  37375747 actctatcaatttgaatgaatgaatatcgttta 37375715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 39090390 - 39090529
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| ||||||||| |||||||| | || ||||||| |||||  || |||||||| || | |||| ||||||||| | |||||    
T  39090390 tgtgtaggctttagtactttgccattttatgatattaacatggatattgtgaggttgttcacatattcatcatttttgtttttagcgaattttccttgta 39090489  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  |  |||| ||||||||| ||||||| |||||||||||    
T  39090490 tcaacgtactttatcaatttgaatgaatgaatatcattta 39090529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 42491015 - 42491137
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||| | |||||||||||||||| | ||||||||||  ||||  |||||| ||| ||| | |||| |||||||||||||| | | ||| ||||    
T  42491015 tttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacaaatttatc-cttttgtttttagcgaatttgcattatgtcgatgtact 42491113  T
Q  111 ctatcaatttaaatgaataaatat 134  Q
    |||||||||| ||||||| |||||    
T  42491114 ctatcaatttgaatgaatgaatat 42491137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 47750036 - 47750163
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||| ||||  || |||||||  |  | |||| ||||||||| |||| ||    
T  47750036 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagtctgttcacatattcatccttgatgtttttagcgaatttacattata 47750135  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    | ||| |||||||||||||| |||||||    
T  47750136 tcgatgtactctatcaatttgaatgaat 47750163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 21329108 - 21328983
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| || |||||| | |||||||||||||||| | ||||||||| ||||||  || |||||||  || | |||| |||||||||| |||| ||     
T  21329108 tgtaggcttgtgcactttgccgttttatgctattaacatggatgttgtgaatttgttcacagattcatcctttttgtttttagcgaatttgtattgcatc 21329009  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  21329008 gatgtactctatcaatttgaatgaat 21328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 25855012 - 25854890
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatact 110  Q
    |||||||||||  |||||||||||||||| | ||||||||||| ||||| || |||||||  || || |||| ||||||||| |||  ||| ||| ||||    
T  25855012 ttgtactttgttgttttatgctattaacatggatgttgtgagtctgtttacagattcatccttttttgtttttagcgaatttacat--tatcgatgtact 25854915  T
Q  111 ctatcaatttaaatgaataaatatc 135  Q
    |||||||||| ||||||| ||||||    
T  25854914 ctatcaatttgaatgaatgaatatc 25854890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 37890294 - 37890165
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||||||||||  | ||||||| | | |||| | ||| |||||||||||| |||||||||||   | | |||| | |||||||||||||||| ||| ||    
T  37890294 cttttgtacttttccgttttatgttgtcaacatggatgatgtgagtttgttcgcaaattcatcttatttgtttttaacgaatttgcattgtatcgatgta 37890195  T
Q  109 ctctatcaatttaaatgaataaatatcatt 138  Q
    || ||||||||| ||||||| |||||||||    
T  37890194 ctatatcaatttgaatgaatgaatatcatt 37890165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 40775580 - 40775705
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||||||||||  ||||  || ||||||| ||  |||||| |||||||||||||| ||| ||| |||||    
T  40775580 ttgtactttgccgttttatgctattaacatggatgttgtgagcatgttcacatattcatc-ct--tttttttagcgaatttgcattatatcgatgtactc 40775676  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    |||||||||  |||||| |||||| ||||    
T  40775677 tatcaatttggatgaatgaatatctttta 40775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 43806938 - 43806823
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatactctatcaatttaaa 123  Q
    |||||| ||||||||| | |||||||||   ||||  || |||||||| ||||| |||| |||||||||||||| ||| ||| |||||||||||||||||    
T  43806938 ttttatactattaacatggatgttgtgatcctgttcacagattcatca-ttcttgtttttagcgaatttgcattatatcgatgtactctatcaatttaaa 43806840  T
Q  124 tgaataaatatcattta 140  Q
    ||||| ||||| |||||    
T  43806839 tgaatgaatataattta 43806823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 10574693 - 10574827
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttct-tttttcagcgaatttgcatt------gtattgat 105  Q
    ||||||||| | |||||||||||||||| | ||| ||||||||||||  ||||||||||  || | ||||| |||||||||  |||      ||||||||    
T  10574693 tgtactttgccgttttatgctattaacatggatgctgtgagtttgttcacaaattcatcctttttattttttagcgaatttagatttatattgtattgat 10574792  T
Q  106 atactctatcaatttaaatgaataaatatcattta 140  Q
     |||||||||||||| ||||||| |||||||||||    
T  10574793 gtactctatcaatttgaatgaatgaatatcattta 10574827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 33530278 - 33530151
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatac 109  Q
    ||||||| |||| | | ||||| |||||||| | ||| ||||||||||||  || ||||||| ||| | |||| ||||||||| ||||||||  || |||    
T  33530278 ttttgtattttgccgtgttatgttattaacatggatgctgtgagtttgttcacagattcatctcttttgtttttagcgaatttacattgtatcaatgtac 33530179  T
Q  110 tctatcaatttaaatgaataaatatcat 137  Q
    ||||||||||| |||||||  |||||||    
T  33530178 tctatcaatttgaatgaatgcatatcat 33530151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5024868 - 5024758
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||| |||||| ||| |||||||||||| | ||||||||||||||||  || |||||||| || | |||| ||| ||||| |||||||    
T  5024868 tgtgtaggctttagtattttgtcgtttcatgctattaacatggatgttgtgagtttgttcacagattcatcatttttgtttttagcaaattttcattgta 5024769  T
Q  101 ttgatatactc 111  Q
    | ||| |||||    
T  5024768 tcgatgtactc 5024758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 45482386 - 45482515
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatata 108  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||  || ||||||| ||  |||||| |||||      ||||| ||||||| ||| ||    
T  45482386 tactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatc-ct--tttttttagcgaatttggatttgtattgtatcgatgta 45482482  T
Q  109 ctctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||||| ||||||| |||||| |||||    
T  45482483 ctctatcaatttgaatgaattaatatcgtttac 45482515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 9137271 - 9137328
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||||||||||||||||||||| | ||| |||||||||||| | |||||||||    
T  9137271 gtactttgtcattttatgctattaacatggatgatgtgagtttgttcgtaaattcatc 9137328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 21990992 - 21991124
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||| ||| |    
T  21990992 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgt 21991091  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  21991092 actctatcaatttgaatgaatgaatatcgttta 21991124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 24320014 - 24319882
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt------gcattgtattgatat 107  Q
    |||||||| | ||||||||||| |||| | ||||||||||||||||  || |||||||  || | |||| |||||||||      | ||||||| ||| |    
T  24320014 gtactttgccgttttatgctatcaacatggatgttgtgagtttgttcacatattcatcttttttgtttttagcgaatttagatttgtattgtatcgatgt 24319915  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||||||| |||||| ||||    
T  24319914 actctatcaatttaaatgaatgaatatcgttta 24319882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 37593413 - 37593545
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatat 107  Q
    |||||||||| |||||||||||||||| | || |||||||||||||  || |||||||| || | |||| |||||      ||||| ||||||| ||| |    
T  37593413 gtactttgtcgttttatgctattaacatggatattgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatgt 37593512  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||| ||||||| |||||| ||||    
T  37593513 actccatcaatttgaatgaatgaatatcgttta 37593545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 141
Target Start/End: Complemental strand, 17473553 - 17473419
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||  |||     
T  17473553 tgtactttgccattttatcctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatg 17473454  T
Q  107 tactctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||||||| || |||| ||||||||||||    
T  17473453 tactctatcaatttgaaagaatgaatatcatttac 17473419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 141
Target Start/End: Original strand, 17579661 - 17579795
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| |||||||| ||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||      ||||| ||||||  |||     
T  17579661 tgtactttgccattttatcctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtaccgatg 17579760  T
Q  107 tactctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||||||| || |||| ||||||||||||    
T  17579761 tactctatcaatttgaaagaatgaatatcatttac 17579795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 27535838 - 27535889
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  27535838 atttgtattgtatcgatgtactctatcaatttaaatgaataaatatcgttta 27535889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 43483890 - 43484009
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||  ||||||||| |||||||||||||||| | ||| ||||||||||||  || |||||||  ||   |||| ||||||||| |||||||    
T  43483890 tgtgtaggctttaatactttgtcgttttatgctattaacatggatgatgtgagtttgttcacagattcatctttttcgtttttagcgaattttcattgta 43483989  T
Q  101 ttgatatactctatcaattt 120  Q
    | |||  ||| |||||||||    
T  43483990 tagatgaactatatcaattt 43484009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 43847384 - 43847435
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  43847384 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcattta 43847435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 44681770 - 44681833
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    ||||||||||||||| ||||| |||||||||| | |||||||| ||||||| ||| ||||||||    
T  44681770 cttttgtactttgtcgttttaagctattaacatggatgttgtgcgtttgttcgcagattcatca 44681833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 6667724 - 6667770
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||    
T  6667724 tgtactttgccattttatgctattaacatggatgttgtgagtttgtt 6667770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 19895485 - 19895363
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    ||||||| || | |||||||||||||||| | ||||||||||  | ||  || |||||||  || | |||| |||||||||||||| |||  || |||||    
T  19895485 ttgtactgtgccgttttatgctattaacatggatgttgtgagcctattcacatattcatcctttttgtttttagcgaatttgcattatatcaatgtactc 19895386  T
Q  112 tatcaatttaaatgaataaatat 134  Q
    ||||||||| ||||||| |||||    
T  19895385 tatcaatttgaatgaatgaatat 19895363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 26161301 - 26161416
Alignment:
Q  30 tgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt-gtatt----gatatactctatcaatttaaat 124  Q
    ||||||||||| | ||| ||||||||||||  || |||||||  || | |||| |||||||||| ||| |||||    |||||||||||||||||| |||    
T  26161301 tgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtatttatcgatatactctatcaatttgaat 26161400  T
Q  125 gaataaatatcattta 140  Q
    ||||||||| ||||||    
T  26161401 gaataaataacattta 26161416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 28314413 - 28314355
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||| |||||||| ||||| ||| | |||||||||||||||||||| |||||||    
T  28314413 tgtactttgacattttattctattcacatggatgttgtgagtttgtttgcatattcatc 28314355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 38273230 - 38273276
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||    
T  38273230 ttttatgctattaacatggatgttgtgagtttgttagcaaattcatc 38273276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 10094770 - 10094902
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| | ||||||||||||||||   ||||||||||||||||  || |||||||  || | |||| ||| |||||| |||      ||||| ||||    
T  10094770 gtactttgccgttttatgctattaacattgatgttgtgagtttgttcacagattcatcctttttgtttttagcaaatttgaatttctattgtattaatat 10094869  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  10094870 actctatcaatttgaatgaatgaatatcgttta 10094902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 21552265 - 21552140
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||||||   ||||||| |||||||| | ||| ||||||||||||   | ||||||| ||| | |||| ||| |||||| |||  ||     
T  21552265 tgtaggcttatgtactttgctgttttatgttattaacatggatgatgtgagtttgttcatagattcatcccttttgtttttagcaaatttgtattacatc 21552166  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
     |||||||||||||||||||||||||    
T  21552165 aatatactctatcaatttaaatgaat 21552140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 27535758 - 27535803
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||    
T  27535758 gtactttgtcgttttatgctattaacatggatgttgtgagtttgtt 27535803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 36253264 - 36253305
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  36253264 tttgtcgttttatgctattaacacggatgttgtgagtttgtt 36253305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 40477019 - 40477148
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||| | ||||||| |||||||| | ||||||| ||| | ||  || |||||||  || | |||| || ||||||||||| ||||||| | ||    
T  40477019 tttgtactttgccgttttatgttattaacatggatgttgttagtctattcacagattcatcctttttgttttaagtgaatttgcattatattgatgttct 40477118  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    || ||||||| ||||||| |||||| ||||    
T  40477119 ctttcaatttgaatgaatgaatatctttta 40477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 11833349 - 11833480
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaat------ttgcattgtattgatata 108  Q
    ||||||| | |||||||||||||| | | ||||||||||||||||  || |||||||  || | |||| |||||||      ||| ||||||| ||| ||    
T  11833349 tactttgccgttttatgctattaatatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatgcgaatttgtattgtatcgatgta 11833448  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||| ||||    
T  11833449 ctctatcaatttgaatgaatgaatatcgttta 11833480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 21603867 - 21603915
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  21603867 gaatttgtattgtattgatgtactctatcaatttgaatgaatgaatatc 21603915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 32741074 - 32741205
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatata 108  Q
    ||||||||  |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| || ||      ||||| ||||||| ||||||    
T  32741074 tactttgttgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagtgaatttagatttgtattgtatcgatata 32741173  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||| ||| |||||| ||||    
T  32741174 ctctatcaatttgaataaatgaatatcgttta 32741205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 2622926 - 2622980
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    |||||| | |||||||||||||| ||||||||||||||||||  || ||||||||    
T  2622926 tttgtcgtcttatgctattaacatgaatgttgtgagtttgttcacagattcatca 2622980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 14762358 - 14762404
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||| | | ||||| ||||||||||||||||||||||    
T  14762358 ttttatgctattaaaatggatgttatgagtttgtttgcaaattcatc 14762404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 32944188 - 32944238
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||||||||||||| ||| |||||||  |||||||||| ||||||    
T  32944188 cttttgtactttgtcattttgtgccattaacataaatgttgtgaatttgtt 32944238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 34594319 - 34594217
Alignment:
Q  16 actttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatc 115  Q
    |||||| | |||||||||||||||| | ||||||||||||||||  || ||| |||| || | |||| |||||||||| |||  || ||| ||| |||||    
T  34594319 actttgccgttttatgctattaacatggatgttgtgagtttgttcacatattaatcatttttgtttttagcgaatttgtattacatcgatgtacactatc 34594220  T
Q  116 aat 118  Q
    |||    
T  34594219 aat 34594217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 34899446 - 34899408
Alignment:
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  34899446 ttgatgtactctatcaatttgaatgaataaatatcattt 34899408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 36719341 - 36719295
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||||| | ||||||||||||||||  ||||||||||    
T  36719341 ttttatgctattaacatggatgttgtgagtttgttcacaaattcatc 36719295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 46025847 - 46025801
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  46025847 tgtactttgtcgttttatgctattaacatggatgctgtgagtttgtt 46025801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 5238343 - 5238396
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||| |||||| ||||||| |||||||||||||| ||||    
T  5238343 gaatttgtattgtatggatgtactctgtcaatttgaatgaataaatatctttta 5238396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 21609490 - 21609453
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcattt 139  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  21609490 tgatatactctatctatttaaatgaataaatattattt 21609453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 24533611 - 24533558
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||| ||||||| |||||||||||||| | |||||||||||| ||||    
T  24533611 gaatttgtattatattgatgtactctatcaatttgattgaataaatatctttta 24533558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 32312917 - 32312962
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  32312917 attgtatcgatgtactctatcaatttgaatgaatgaatatcattta 32312962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 9137814 - 9137854
Alignment:
Q  100 attgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| |||||||||||||| |||||||||||||| ||||    
T  9137814 attgatgtactctatcaatttgaatgaataaatatctttta 9137854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 14733875 - 14733819
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||| |||| || |||||| |||||||||||||||||| | |||| |||||||||||    
T  14733875 tgtaggcttatgcactttgccattttatgctattaacatggatgtcgtgagtttgtt 14733819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 14810828 - 14810919
Alignment:
Q  44 atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||||||||||||  || |||||||| || | |||| ||| | |||  | |||||||| |||||||||||||||| ||||||||||||||    
T  14810828 atgttgtgagtttgttcacatattcatcatttttatttttagcaattttctatttgtattg-tatactctatcaattttaatgaataaatatc 14810919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 15257823 - 15257914
Alignment:
Q  44 atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||||||||||||  || |||||||| || | |||| ||| | |||  | |||||||| |||||||||||||||| ||||||||||||||    
T  15257823 atgttgtgagtttgttcacatattcatcatttttatttttagcaattttctatttgtattg-tatactctatcaattttaatgaataaatatc 15257914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 25308685 - 25308737
Alignment:
Q  20 tgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    |||| |||||||||||||||| |||| ||||||||||||| | | ||||||||    
T  25308685 tgtcgttttatgctattaacatgaattttgtgagtttgttcgtatattcatca 25308737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 26771222 - 26771186
Alignment:
Q  105 tatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  26771222 tatactctatcaacttaaatgaatgaatatcatttac 26771186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 32083623 - 32083675
Alignment:
Q  88 aatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| ||||||| ||  |||||||||||||| ||| |||||||||||||||    
T  32083623 aatttgtattgtatcgacgtactctatcaatttgaattaataaatatcattta 32083675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 39532765 - 39532721
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||| | |||||||||||||||| ||||| ||||||||||||    
T  39532765 tactttgccgttttatgctattaacatgaatgatgtgagtttgtt 39532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 8e-32; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 34659452 - 34659314
Alignment:
Q  2 gtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    ||||| |||||| ||||||| |||||||||||||||||| | |||||||||||||| | |||||||||||  || | |||| ||| ||||||||||||||    
T  34659452 gtgtaggcttttttactttgccattttatgctattaacatggatgttgtgagtttgctcgcaaattcatcctttatgtttttagcaaatttgcattgtat 34659353  T
Q  102 tgatatactctatcaatttaaatgaataaatatcattta 140  Q
     ||| |||||||||||||| ||||||| |||||||||||    
T  34659352 cgatgtactctatcaatttgaatgaatgaatatcattta 34659314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26771408 - 26771547
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||||||||||||| |  ||||||||||||||| |  ||||||||  || | |||| || ||||||| ||||||    
T  26771408 tgtgtaggcttttgtactttgtcgttttatgctattaacatggttgttgtgagtttgttcgttaattcatcttttttgtttttagtgaatttgtattgta 26771507  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  26771508 tcgatgtactctatcaatttgaatgaatgaatatcattta 26771547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12147860 - 12147726
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| |||||||||| ||||| | ||| ||||||||||||  || ||||||| ||| | |||| ||||||||| |||||||    
T  12147860 tgtgtaggctttagtactttgtcgttttatgctactaacatggatgatgtgagtttgttcacagattcatcccttttatttttagcgaattttcattgta 12147761  T
Q  101 ttgatatactctatcaatttaaatgaataaatatc 135  Q
    | |||||||||||||||||| ||||||| ||||||    
T  12147760 tcgatatactctatcaatttgaatgaatgaatatc 12147726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 13969445 - 13969313
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||||||||||||| | ||||||| |||||||| | |||||||||||||||| ||| |||||||  || | ||||  ||||||||||||||||| ||| |    
T  13969445 gcttttgtactttgccgttttatgttattaacatggatgttgtgagtttgttcgcagattcatcctttttgttttttgcgaatttgcattgtatcgatgt 13969346  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    | ||||||||||| ||||||| |||||||||||    
T  13969345 attctatcaatttgaatgaatgaatatcattta 13969313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8893594 - 8893733
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||||||||| |||  |||||||||||||||| | ||||| ||||||||||   | |||||||  || | |||| |||||||||||||||||    
T  8893594 tgtgtaggcttttgtactctgttgttttatgctattaacatggatgttatgagtttgttcctagattcatcctttttgtttttagcgaatttgcattgta 8893693  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  8893694 tcgatgtactctatcaatttgaatgaatgaatatcattta 8893733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33177410 - 33177271
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||| | |||||||| ||||||| | |||||||||||||||| ||| |||||||  || | |||| ||| |||||||||||||    
T  33177410 tgtgtaggcttttgtactttgccgttttatgcaattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagcaaatttgcattgta 33177311  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||| ||||| ||||||| ||||| |||||    
T  33177310 tcgatgtactctattaatttgaatgaatgaatattattta 33177271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 46589458 - 46589589
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    |||| |||||||||| ||||||| |||||||| | ||| ||||||||||||  || ||||||| ||| | |||| ||||||||| |||||||| ||| ||    
T  46589458 ctttagtactttgtcgttttatgttattaacatggatgatgtgagtttgttcacatattcatcccttttgtttttagcgaattttcattgtatcgatgta 46589557  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||||||||    
T  46589558 ctctatcaatttgaatgaatgaatatcattta 46589589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 23257390 - 23257529
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||||||||   |||| ||||||||||| | ||||||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  23257390 tgtgtaggcatttgtactttgctgttttgtgctattaacatggatgttgtgagcctgttaacatattcatcctttttgtttttagcgaatttgcattata 23257489  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||||||||||||||||||||||||||||||    
T  23257490 tcgatgtactctatcaatttaaatgaataaatatcattta 23257529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 29067349 - 29067476
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||| |||||  ||||| ||| ||| |||| || | |||| |||||||||||||| ||    
T  29067349 tgtgtaggcttttgtactttgtcgttttatgctattaacatggatgctgtgaaattgttcgcagatttatcatttttgtttttagcgaatttgcatttta 29067448  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    ||||| ||||||||| |||| |||||||    
T  29067449 ttgatgtactctatctatttgaatgaat 29067476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 38644609 - 38644470
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | |||||||||| |||||  || |||||||  ||   |||| ||| |||||||||| ||    
T  38644609 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcttgttcacatattcatccttttagtttttagcaaatttgcattata 38644510  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||||||||||||||||| ||||| |||||    
T  38644509 ttgatgtactctatcaatttaaatgaatgaatataattta 38644470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 2 - 140
Target Start/End: Complemental strand, 27469519 - 27469381
Alignment:
Q  2 gtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    ||||| |||||  |||||||||||||||||||||||||| | ||| ||||||||||||| |  |||||||  || | |||| | ||||||| |||| |||    
T  27469519 gtgtaggctttaatactttgtcattttatgctattaacatggatgatgtgagtttgtttacggattcatcctttttatttttatcgaattttcattatat 27469420  T
Q  102 tgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||| ||||| ||||||| |||||||||||    
T  27469419 tgatgtactctattaatttgaatgaatgaatatcattta 27469381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 38646896 - 38647025
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||| | |||||||||||||||| | ||||||||||  ||||  ||  ||||||  || | |||| |||||||||||||| ||||||| ||||    
T  38646896 tttgtactttgcctttttatgctattaacatggatgttgtgagcctgttcacagtttcatcctttttgtttttagcgaatttgcattatattgatgtact 38646995  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||||||||    
T  38646996 ctatcaatttgaatgaatgaatatcattta 38647025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 2350926 - 2351049
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||||||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||| || | |||| |||||||||| |||| ||     
T  2350926 tgtaggcttttgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacatattcatca-ttttgtttttagcgaatttgtattgcatc 2351024  T
Q  103 gatatactctatcaatttaaatgaa 127  Q
    ||| |||||||||||||| ||||||    
T  2351025 gatgtactctatcaatttgaatgaa 2351049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 6212715 - 6212587
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||||||||||  ||||  || |||||||| || | |||| | ||||||| |||| ||| |||||||||    
T  6212715 ttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacatattcatcatttttgtttttaacgaatttacattatatcgatatactc 6212616  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| |||||||||||||| ||||    
T  6212615 tatcaatttgaatgaataaatatctttta 6212587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 22031906 - 22031779
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatat 107  Q
    ||||||||||||||| ||||||| |||||| | ||||| ||||| |||||||| | ||||||| ||| || |||| || ||||||| ||||||||||| |    
T  22031906 cttttgtactttgtcgttttatgatattaatatgaatgatgtgaatttgtttgaagattcatc-cttattatttttagtgaatttgtattgtattgatgt 22031808  T
Q  108 actctatcaatttaaatgaataaatatca 136  Q
    ||||||||||||| ||||||| |||||||    
T  22031807 actctatcaatttgaatgaatgaatatca 22031779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 10877649 - 10877788
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| ||||||||||||| ||   |||  ||||||||||| ||| ||  |||  || | |||| |||||||||||||| ||    
T  10877649 tgtgtaggcttttgtactttgtcgttttatgctattagcatcgatgaagtgagtttgttcgcagatgtatcctttttgtttttagcgaatttgcattata 10877748  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||| ||| ||  |||||||||||    
T  10877749 ttgatatactctatcaatttgaataaacgaatatcattta 10877788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 15276258 - 15276119
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||| ||||  || |||||||  || | |||| |||||||||||||| ||    
T  15276258 tgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgtttttagcgaatttgcattata 15276159  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||| ||||    
T  15276158 tcgatgtactctatcaatttgaatgaatgaatatctttta 15276119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 630586 - 630456
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||| || ||||||||||||||| | |||||| |||| ||||  || |||||||| || | |||| |||||||||||||| ||| ||| ||||    
T  630586 tttgtaccttgccactttatgctattaacatggatgttgcgagtctgttcacagattcatcatttttgtttttagcgaatttgcattatatcgatgtact 630487  T
Q  111 ctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||| ||||||| |||||| |||||    
T  630486 ctatcaatttgaatgaatgaatatcttttac 630456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 11121291 - 11121417
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactcta 113  Q
    |||||||||| |||||| ||||||||| | || |||||||||||||  ||||||||||  || | |||| |||||| || |||||||| ||| || ||||    
T  11121291 gtactttgtcgttttatactattaacatggatattgtgagtttgttcacaaattcatcctttttgtttttagcgaactttcattgtatcgatgtattcta 11121390  T
Q  114 tcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| |||||||||||    
T  11121391 tcaatttgaatgaatgaatatcattta 11121417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 30853748 - 30853620
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||  |||||||| ||||| | | |||||||||||||||||||| ||||||| ||| || ||  |||||||||||||||||| ||| || |    
T  30853748 tttgtactttgttgttttatgcaattaatatggatgttgtgagtttgtttgcagattcatc-ctttttgttctagcgaatttgcattgtatcgatgtatt 30853650  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
     ||||||||| ||| ||| |||||||||||    
T  30853649 atatcaatttgaataaatgaatatcattta 30853620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 34566985 - 34567110
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||| |||| ||     
T  34566985 tgtaggcttatgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttatttttagcgaatttgtattgcatc 34567084  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  34567085 gatgtactctatcaatttgaatgaat 34567110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36621653 - 36621786
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| |||||||||||||||||| | |||||||||| |||||  || ||||||   || | |||| |||||||||||||| ||    
T  36621653 tgtgtaggcatttgtactttgccattttatgctattaacatggatgttgtgagcttgttcacatattcattctttttatttttagcgaatttgcattata 36621752  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||| ||||||| ||||||| |||||    
T  36621753 tcgatgtactctgtcaatttgaatgaatgaatat 36621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 47392438 - 47392575
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    ||||||||||||||||||||||| ||||| | |||||||| | |||||||||||||||| ||  ||| |||  || |  ||| |||||||||||||||||    
T  47392438 tgtgtatgcttttgtactttgtcgttttacgttattaacatggatgttgtgagtttgttcgctgatttatcttttttgcttttagcgaatttgcattgta 47392537  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| | ||||||  |||| ||| ||| |||||||||||    
T  47392538 ttgatgtgctctat--atttgaataaatgaatatcattta 47392575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 900378 - 900492
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||| ||||| | | |||||||||||| ||||||| ||||||| ||| | |||| ||||||||| |||||||| ||| |||||||||||||| |||    
T  900378 ttttatgcaattaatatggatgttgtgagttcgtttgcagattcatc-cttttgtttttagcgaatttacattgtatcgatgtactctatcaatttgaat 900476  T
Q  125 gaataaatatcattta 140  Q
    |||| ||||| |||||    
T  900477 gaatgaatataattta 900492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 18343944 - 18344059
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| ||| |||||| ||||||| |||||||||||||||||| |||    
T  18343944 ttttatgctattaacagggatgatgtgagtttgttcacagattcatcctttttgtttttagcaaatttgtattgtatcgatatactctatcaatttgaat 18344043  T
Q  125 gaataaatatcattta 140  Q
     |||||||||| ||||    
T  18344044 aaataaatatcgttta 18344059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44513814 - 44513675
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||||||||   ||||||| |||||||| | ||||||||||||||||   | |||||||  || | |||| ||||||||| |||||||    
T  44513814 tgtgtaggctttagtactttgctgttttatgttattaacatggatgttgtgagtttgttcaaagattcatcctttttgtttttagcgaattttcattgta 44513715  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||||||||||| |||||| ||||    
T  44513714 tcgatgtactctaccaatttaaatgaatgaatatctttta 44513675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 37662671 - 37662778
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactcta 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  || |||||     | |||||| |||||||||| |||| || ||| |||||||    
T  37662671 gtactttgtcattttatgctattaacatgaatgttgtgagtttgttcacagattca----gtttttttttagcgaatttgtattgcatcgatgtactcta 37662766  T
Q  114 tcaatttaaatg 125  Q
    ||||||| ||||    
T  37662767 tcaatttgaatg 37662778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 52839832 - 52839965
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||||||||||||||||| |  |||||||  || |  ||| || |||||| |||||||    
T  52839832 tgtgtaggctttagtactttgccgttttatgctattaacatggatgttgtgagtttgtttacggattcatcctttttacttttagtgaattttcattgta 52839931  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||||| ||||| ||||||| |||||    
T  52839932 tcgatgtactctattaatttgaatgaatgaatat 52839965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12967545 - 12967406
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||  ||||  || ||| |||| || | |||| ||| |||||||| | ||    
T  12967545 tgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgagcctgttcacagatttatcatttttgtttttagcaaatttgcactata 12967446  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  12967445 tcgatgtactctatcaatttgaatgaatgaatatcattta 12967406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 45659316 - 45659451
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||||||||   |||||| ||||||||| | ||||||||||  ||||  || ||||||| ||| | |||| ||| |||||||||| ||    
T  45659316 tgtgtaggcatttgtactttggtgttttatactattaacatggatgttgtgagcctgttcacagattcatcccttttgtttttagcaaatttgcattata 45659415  T
Q  101 ttgatatactctatcaatttaaatgaataaatatca 136  Q
    | ||| ||||||||| |||||||||||| |||||||    
T  45659416 tcgatgtactctatcgatttaaatgaatgaatatca 45659451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 5844443 - 5844573
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||| || ||||||||||||||| | |||||| |||| ||||  || |||||||  || | |||| |||||||||||||| ||| ||| ||||    
T  5844443 tttgtaccttgccactttatgctattaacatggatgttgcgagtctgttcacagattcatcctttttgtttttagcgaatttgcattatatcgatgtact 5844542  T
Q  111 ctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||| ||| ||| |||||| |||||    
T  5844543 ctatcaatttgaattaatgaatatcttttac 5844573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 22344700 - 22344585
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| | ||| ||||||  ||||  || |||||||| || | |||| | |||||||||||| ||| ||| |||||||||||||| |||    
T  22344700 ttttatgctattaacatggatgatgtgagcctgttcacatattcatcatttttgtttttaacgaatttgcattatatcgatgtactctatcaatttgaat 22344601  T
Q  125 gaataaatatcattta 140  Q
    |||| |||||| ||||    
T  22344600 gaatgaatatctttta 22344585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 29726388 - 29726309
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  ||||||||||| || | |||| ||||||||||    
T  29726388 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacaaattcatcatttttgtttttagcgaatttg 29726309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 44562537 - 44562422
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| | |||||||||||| ||| ||| |||||||||||||| | |    
T  44562537 ttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttatcgaatttgcattatatcgatgtactctatcaatttgact 44562438  T
Q  125 gaataaatatcattta 140  Q
    |||| |||||||||||    
T  44562437 gaatgaatatcattta 44562422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 49652161 - 49652276
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| |  ||||||||| |||||  || || ||||  || | |||| ||| |||||||||| ||| ||| |||||||||||||| |||    
T  49652161 ttttatgctattaacatggttgttgtgagcttgttcacagatccatcctttttgtttttagcaaatttgcattatatcgatgtactctatcaatttgaat 49652260  T
Q  125 gaataaatatcattta 140  Q
    |||| |||||||||||    
T  49652261 gaatgaatatcattta 49652276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 9298222 - 9298090
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcg------aatttgcattgtattgatat 107  Q
    ||||||||||||||||| ||||||||| | ||||||||||||| || ||| |||||||  || | ||||||| |      |||||  || |||| ||| |    
T  9298222 gtactttgtcattttatactattaacatggatgttgtgagtttattcgcagattcatcctttttgttttcagtgattttaaatttatatagtatcgatgt 9298123  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||||||||| ||||||||    
T  9298122 actctatcaacttaaatgaataaacatcattta 9298090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 13691573 - 13691448
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||| |||| | |||||||||||||||| | ||||||||||||||||   | |||||||  || | |||| ||| |||||| |||| ||     
T  13691573 tgtaggcttatgtattttgccgttttatgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcaaatttgtattgcatc 13691474  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  13691473 gatgtactctatcaatttgaatgaat 13691448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 40992600 - 40992728
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| |||||| ||||||||| | || |||||||  ||||  || |||||||  || | |||| ||||||||| |||| ||    
T  40992600 tgtgtaggcatttgtactttgtcgttttatactattaacatggatattgtgagcctgttcacagattcatcctttttgtttttagcgaatttacattata 40992699  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
    |  || |||||||||||||| ||||||||    
T  40992700 tcaatgtactctatcaatttgaatgaata 40992728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 7995368 - 7995289
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||||    
T  7995368 gtactttatcattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttg 7995289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 45193419 - 45193340
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||| | |||||||||||||||| | ||| ||||||||||||| || |||||||| || | |||| ||||||||||    
T  45193419 gtactttgccgttttatgctattaacatggatgatgtgagtttgtttacagattcatcatttttgtttttagcgaatttg 45193340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 4882156 - 4882036
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||| ||||||||||||  |||||||||  ||| |||||| |||||      ||||| ||||||| ||| ||||||||||||    
T  4882156 ttttatgctattaacatggatgctgtgagtttgttcacaaattcat-tcttttttttttagcgaatttggatttgtattgtatcgatgtactctatcaat 4882058  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||||||| |||||| ||||    
T  4882057 ttgaatgaatgaatatcgttta 4882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 28677919 - 28677798
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | |||||||||||||||| ||| |||||||  || | |||| |||||      ||||| ||||||| ||| ||||||||||||    
T  28677919 ttttatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaat 28677820  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||| ||| |||||| ||||    
T  28677819 ttgaataaatgaatatcgttta 28677798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 29205597 - 29205730
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg------cattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||| ||  || |||||||  || | |||| ||||||||||       ||||||| |||     
T  29205597 tgtactttgccgttttatgctattaacatggatgttgtgagtttattcacagattcatcctttttgtttttagcgaatttggatttttattgtatcgatg 29205696  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  29205697 tactctatcaatttgaatgaatgaatatcgttta 29205730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 48003538 - 48003584
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  48003538 ttttatgctattaacatgaatgttgtgattttgtttacaaattcatc 48003584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 42491202 - 42491325
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttc---agcgaatttgcattgtattgatatact 110  Q
    |||||||||| ||||||| |||||||| | ||||||||||||||||  || |||||||| || |||| ||      ||||||  ||||||| ||| ||||    
T  42491202 gtactttgtcgttttatgttattaacatggatgttgtgagtttgttcacagattcatcattttttttatcgaatttgaatttatattgtatcgatgtact 42491301  T
Q  111 ctatcaatttaaatgaataaatat 134  Q
    |||||||||| ||||||| |||||    
T  42491302 ctatcaatttgaatgaatgaatat 42491325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 140
Target Start/End: Original strand, 171531 - 171567
Alignment:
Q  104 atatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||||||||||| |||||||||||    
T  171531 atatactctatcaatttaaatgaatgaatatcattta 171567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 10304903 - 10304951
Alignment:
Q  24 attttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    ||||||||||||||| | | |||||||||||||||||||| ||||||||    
T  10304903 attttatgctattaaaatggatgttgtgagtttgtttgcagattcatca 10304951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 15575832 - 15575868
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttg 61  Q
    ||||||| |||||||||||||||||||||||||||||    
T  15575832 ttttatgttattaacacgaatgttgtgagtttgtttg 15575868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 25689565 - 25689517
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatc 135  Q
    ||||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  25689565 gaatttgtattgtatcaatatactctatcaatttgaatgaataaatatc 25689517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 28213358 - 28213494
Alignment:
Q  4 gtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattg 103  Q
    |||||| ||| || |||| | |||||||||||||||| | ||| ||||| | ||||  || |||||||  || | |||| |||||||||||||| |||      
T  28213358 gtatgcatttatattttgccgttttatgctattaacatggatgatgtgaatctgttcacatattcatcctttttgtttttagcgaatttgcattatatca 28213457  T
Q  104 atatactctatcaatttaaatgaataaatatcattta 140  Q
    || |||| ||||||||| ||| ||| |||||||||||    
T  28213458 atgtactttatcaatttgaataaatgaatatcattta 28213494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 424083 - 424040
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttg 57  Q
    |||||||||| |||||||||||||||| | ||||||||||||||    
T  424083 gtactttgtcgttttatgctattaacatggatgttgtgagtttg 424040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 17347906 - 17347962
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||  ||||||||||    
T  17347906 tgtactttgtcgttttatgctatta--acggatgttgtgagtttgttcacaaattcatc 17347962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 32301663 - 32301710
Alignment:
Q  24 attttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||    
T  32301663 attttatgctattaacatggatgatgtgagtttgttcgcaaattcatc 32301710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 3233100 - 3233146
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| | |||||||||||||||| || |||||||||||||||    
T  3233100 tgtactttgccgttttatgctattaacatgagtgttgtgagtttgtt 3233146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 20413112 - 20413158
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  20413112 tgtactttgtcgttttatgctattaacatggatgatgtgagtttgtt 20413158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 40862625 - 40862567
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatca 72  Q
    ||||| |||| |||||||||||||||| | ||||| |||||||||| ||| ||||||||    
T  40862625 gtactctgtcgttttatgctattaacatggatgttttgagtttgttcgcagattcatca 40862567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 47551411 - 47551489
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||  || |||||||  || | |||| ||||||||||    
T  47551411 tactttgccattttatgctattaacatagatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttg 47551489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 51418393 - 51418447
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||||| ||| ||| ||| |||||||||||||||||||||| |||||| |||||    
T  51418393 gaatttgtattatatcgatgtactctatcaatttaaatgaatgaatatcgtttac 51418447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 171324 - 171361
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaaca 40  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  171324 tgtaggcttttgtactttgtcgttttatgctattaaca 171361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 7421087 - 7421169
Alignment:
Q  44 atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaat 128  Q
    |||||||||||||||||||| ||||||  ||| || ||| | | ||||||||||||||| || |||| ||||| ||| |||||||    
T  7421087 atgttgtgagtttgtttgcagattcat--ctttttgttttaacaaatttgcattgtattaatgtactatatcattttgaatgaat 7421169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 12537936 - 12537981
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||| |||||||||||||| ||| ||| |||||||||||    
T  12537936 attgtattgatgtactctatcaatttgaataaattaatatcattta 12537981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 15698578 - 15698639
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||| ||| ||| |||||| ||||||| ||||||| |||||| ||||    
T  15698578 tttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatctttta 15698639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 25032815 - 25032762
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||| |||||| ||||    
T  25032815 gaatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgttta 25032762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 32538931 - 32538890
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaat 128  Q
    |||||| |||||||| ||| ||||||||||||||||||||||    
T  32538931 gaatttacattgtatcgatgtactctatcaatttaaatgaat 32538890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Original strand, 32784423 - 32784488
Alignment:
Q  28 tatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||| |||||||| ||||||||||||||||||   |||||||||| || | |||| ||||||||||    
T  32784423 tatgttattaacatgaatgttgtgagtttgttaaaaaattcatcatttttgtttttagcgaatttg 32784488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 43504218 - 43504259
Alignment:
Q  99 tattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||| ||||| ||| |||||||||||    
T  43504218 tattgatatactctatcaatgtaaataaatgaatatcattta 43504259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 45750808 - 45750853
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||| |||||||||||||||||| | ||| ||||||||||||    
T  45750808 gtactttgccattttatgctattaacatggatgctgtgagtttgtt 45750853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 16263041 - 16263085
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    |||||||||||||||| || ||||||||||||||| ||| |||||    
T  16263041 ttttatgctattaacatgagtgttgtgagtttgttagcagattca 16263085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 16574878 - 16574834
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    |||||||||||||||| | ||||  ||||||||||||||||||||    
T  16574878 ttttatgctattaacatggatgtcttgagtttgtttgcaaattca 16574834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 28666476 - 28666520
Alignment:
Q  96 ttgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||| ||| |||||||||||||| |||||||||||||| ||||    
T  28666476 ttgtatcgatgtactctatcaatttgaatgaataaatatcgttta 28666520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 8e-29; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 12524474 - 12524349
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||  || |||||||   ||| |||| |||||||||| ||||| |     
T  12524474 tgtaggcttttgtactttgtcattttatgctattaacatgaatgttgtgagtttgttcacatattcatcctctctatttttagcgaatttgtattgtttg 12524375  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
     ||||| |||||||||||||||||||    
T  12524374 aatataatctatcaatttaaatgaat 12524349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 15710854 - 15710985
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||||||||||||  |||||||||||||||| | |||||||||||||||| ||| |||||||  || |  ||| || ||||||||||||||||||| ||    
T  15710854 cttttgtactttgttgttttatgctattaacatggatgttgtgagtttgttcgcatattcatcctttttggttttagtgaatttgcattgtattgatgta 15710953  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
     ||||||||||| ||||||| |||||||||||    
T  15710954 ttctatcaatttgaatgaatgaatatcattta 15710985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 34866741 - 34866873
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttc-ttttttcagcgaatttgcattgtattgatat 107  Q
    ||||||||||||| | |||| ||||||||||| | |||||||||||||||| ||| |||||||  ||  |||||| ||||||||||||||||||||||      
T  34866741 cttttgtactttgacgttttttgctattaacatggatgttgtgagtttgttcgcatattcatctttttgtttttttagcgaatttgcattgtattgatgc 34866840  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||| ||||||||| ||||||| |||||||||||    
T  34866841 actatatcaatttgaatgaatgaatatcattta 34866873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29154522 - 29154661
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | |||||||||||||| |||||||||||||||| | ||| ||||||| |||| ||| |||||||| || | |||| || ||||||  ||||||    
T  29154522 tgtgtaggtttttgtactttgtcgttttatgctattaacatggatgatgtgagtatgttcgcatattcatcatttttgtttttagagaatttatattgta 29154621  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    || ||||||||||||||||| ||| ||| |||||||||||    
T  29154622 ttaatatactctatcaatttgaataaatgaatatcattta 29154661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 28501001 - 28501118
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| |||| ||||||||||| | |||||||||||||||| |||  ||||||  || | |||||||||||||| |||||||| ||| ||||    
T  28501001 tttgtactttgtcgttttttgctattaacatggatgttgtgagtttgttcgcaggttcatcctttttattttcagcgaatttacattgtatcgatgtact 28501100  T
Q  111 ctatcaatttaaatgaat 128  Q
    |||||||||| |||||||    
T  28501101 ctatcaatttgaatgaat 28501118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 2415704 - 2415843
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||| ||||||||| |||||||||||||||| | ||||||||||| ||||  ||||||||||  || | |||| || |||||||||||  |    
T  2415704 tgtgtaggcatttatactttgtcgttttatgctattaacatggatgttgtgagtctgttcacaaattcatcctttttatttttagtgaatttgcattaca 2415803  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | |||||||||||||||||| ||||||| ||||| |||||    
T  2415804 tcgatatactctatcaatttgaatgaatgaatataattta 2415843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 34874160 - 34874285
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    ||||| ||||||| |||||| ||||||||||| | |||| || |||||||| ||| |||||||  || | |||| ||||||||||||||||||||||  |    
T  34874160 cttttatactttgccattttttgctattaacatggatgtcgttagtttgttcgcatattcatcctttttgtttttagcgaatttgcattgtattgatgca 34874259  T
Q  109 ctctatcaatttaaatgaataaatat 134  Q
    |||||| ||||||||||||| |||||    
T  34874260 ctctattaatttaaatgaatgaatat 34874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 6886979 - 6886851
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||| || | |||| |||||||||||||| ||| ||| |||||    
T  6886979 ttgtactttgccgttttatgctattaacatggatgatgtgagcctgttcacatattcatcatttttgtttttagcgaatttgcattatatcgatgtactc 6886880  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||| |||||| ||||    
T  6886879 tatcaatttaaatgaatgaatatctttta 6886851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 18472538 - 18472399
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||  |||||||||||||||| | ||| ||||||||||||  || |||||||| || | |||| |||||| || |||||||    
T  18472538 tgtgtaggctttagtactttgttgttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaactttcattgta 18472439  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||| ||| |||||||||||    
T  18472438 tcgatgtactctaccaatttgaataaatgaatatcattta 18472399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34844218 - 34844337
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||| ||||||||| | ||||||||||||||||  || |||||||| || | |||| ||||||||| |||||||    
T  34844218 tgtgtaggctttagtactttgccgttttatactattaacatggatgttgtgagtttgttcacatattcatcatttttgtttttagcgaattttcattgta 34844317  T
Q  101 ttgatatactctatcaattt 120  Q
    | ||| ||||||||||||||    
T  34844318 tagatgtactctatcaattt 34844337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 37219305 - 37219431
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||||||||||||||||  || ||||||| ||| || ||| ||||||||| |||||||    
T  37219305 tgtgtaggctttagtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatc-ctttttgttttagcgaattttcattgta 37219403  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    |  || |||||||||||||| |||||||    
T  37219404 tcaatgtactctatcaatttgaatgaat 37219431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 6647725 - 6647582
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||  | ||||| |||||||||| | ||||||||||||| || ||| |||||||| || | |||| |||||||||||||||||    
T  6647725 tgtgtaggcttttgtacttttccgttttaagctattaacatggatgttgtgagtttattcgcagattcatcatttttgtttttagcgaatttgcattgta 6647626  T
Q  101 ttgatatactct----atcaatttaaatgaataaatatcattta 140  Q
    | ||| || |||    |||||||| ||||||| |||||||||||    
T  6647625 tcgatgtattctatcaatcaatttgaatgaatgaatatcattta 6647582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3495148 - 3495281
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| |  |||||||||  ||||  || |||||||| || | |||| |||||||||||||| ||    
T  3495148 tgtgtaagcatttgtactttgccgttttatgctattaacatggttgttgtgagcctgttcacatattcatcatttttgtttttagcgaatttgcattata 3495247  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||||||||||| || ||||||||||    
T  3495248 tcgatgtactctatcaatttgaacgaataaatat 3495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 40564967 - 40564842
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||||| ||||||||||||||||   ||||||||||||||||  ||||||||||  || | |||| ||| |||||| |||| ||     
T  40564967 tgtaggcttatgtactttgtcgttttatgctattaacatagatgttgtgagtttgttcacaaattcatcttttttgtttttagcaaatttgtattgcatc 40564868  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  40564867 gatgtactctatcaatttgaatgaat 40564842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 8811964 - 8811836
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||| ||||||||||||  ||||||||||| ||   |||| |||||| || |||||||    
T  8811964 tgtgtaggctttagtactttgccgttttatgctattaacatggatgatgtgagtttgttcacaaattcatcattttcgtttttagcgaactttcattgta 8811865  T
Q  101 ttgatatactctatcaatttaaatgaata 129  Q
    |  || |||||||||||||| ||||||||    
T  8811864 tcaatgtactctatcaatttgaatgaata 8811836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 24288760 - 24288644
Alignment:
Q  11 tttgtactttgtcattttatgc-tattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatac 109  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||| ||| | |||||| || | |||  | |||||||| ||||||||||| |||    
T  24288760 tttgtactttgtcattttatgcatattaacatggatgttgtgagtttgttcgcagaatcatcatttttattt--aacgaatttgtattgtattgatgtac 24288663  T
Q  110 tctatcaatttaaatgaat 128  Q
    ||||| ||||| |||||||    
T  24288662 tctattaatttgaatgaat 24288644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 24373462 - 24373578
Alignment:
Q  11 tttgtactttgtcattttatgc-tattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatac 109  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||||| ||| | |||||| || | |||  | |||||||| ||||||||||| |||    
T  24373462 tttgtactttgtcattttatgcatattaacatggatgttgtgagtttgttcgcagaatcatcatttttattt--aacgaatttgtattgtattgatgtac 24373559  T
Q  110 tctatcaatttaaatgaat 128  Q
    ||||| ||||| |||||||    
T  24373560 tctattaatttgaatgaat 24373578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28618904 - 28619043
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  28618904 tgtgtaggcatttgtactttgtcgttttatgctattaacatggatgatgtgagcctgttgacatattcatcctttttgtttttagcgaatttgcattata 28619003  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| ||||||| |||||| ||||    
T  28619004 tcgatgtactctttcaatttgaatgaatgaatatctttta 28619043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 32387766 - 32387905
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||| ||||| ||||||| |||||| | | |||||||||||||||| ||||||| |||  || | || | | |||||||||| ||||    
T  32387766 tgtgtaggcttttgtaccttgtcgttttatgttattaatatggatgttgtgagtttgttcgcaaatttatcttttttgttgttaacgaatttgcagtgta 32387865  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||| ||||| ||||||| ||||| |||||    
T  32387866 tcgatgtactctattaatttgaatgaatgaatattattta 32387905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33486381 - 33486242
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||  | ||||||||||||||||  || |||||||| || | |||| |||||||||  ||| ||    
T  33486381 tgtgtaggctttagtactttgccgttttatgctattaacgtggatgttgtgagtttgttcacagattcatcatttttgtttttagcgaatttttatttta 33486282  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| || ||||||||||| ||||||| |||||| ||||    
T  33486281 tcgatgtattctatcaatttgaatgaatgaatatctttta 33486242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 37425424 - 37425563
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| || |||| |||||||||||||||||||   ||||||||||||||||  || |||||||| || | |||| | ||||||   ||||||    
T  37425424 tgtgtaggctttagtgctttatcattttatgctattaacatagatgttgtgagtttgttcacatattcatcatttttgtttttatcgaattcttattgta 37425523  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||| ||| |||||||||||    
T  37425524 tcgatctactctatcaatttgaattaatgaatatcattta 37425563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 39308554 - 39308426
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatac 109  Q
    ||||||| |||| | |||||||||||||| |   ||| |||||||||||| ||| ||||||||  |||||||| |||||||||||||| ||| ||| |||    
T  39308554 ttttgtattttgccgttttatgctattaatatagatgatgtgagtttgttcgcagattcatca--tctttttttagcgaatttgcattatatcgatgtac 39308457  T
Q  110 tctatcaatttaaatgaataaatatcattta 140  Q
    | |||||| || ||||||| |||||||||||    
T  39308456 tttatcaaattgaatgaatgaatatcattta 39308426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 41554789 - 41554916
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||||||||||||||||  || ||| |||  || | |||| ||||||||| |||||||    
T  41554789 tgtgtaggctttagtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagatttatcctttttgtttttagcgaattttcattgta 41554888  T
Q  101 ttgatatactctatcaatttaaatgaat 128  Q
    | ||| ||||||| |||||| |||||||    
T  41554889 tcgatgtactctaccaatttgaatgaat 41554916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 20146029 - 20145904
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtat 101  Q
    |||| |||| ||||||||||||||||||||||||||||   ||||||||||||||||  || ||||||  ||| || |||| |||||||||| |||| ||    
T  20146029 tgtaggcttatgtactttgtcattttatgctattaacattgatgttgtgagtttgttcacatattcat-tcttattgtttttagcgaatttgtattgcat 20145931  T
Q  102 tgatatactctatcaatttaaatgaat 128  Q
     |||| ||||||||||||| |||||||    
T  20145930 cgatacactctatcaatttgaatgaat 20145904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 5378614 - 5378743
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||| ||||  |||||||||||||||| | ||||||||||  ||||  || |||||||  || |  ||| |||||||||||||| ||| ||| ||||    
T  5378614 tttgtaccttgttgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgattttagcgaatttgcattatatcgatgtact 5378713  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||||||||    
T  5378714 ctatcaatttgaatgaatgaatatcattta 5378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 17325472 - 17325342
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||||||||||||||||||||||||| | ||||  ||||||||||| || |||||||  || | |||| ||| |||||| |||| ||     
T  17325472 tgtaggcttatgtactttgtcattttatgctattaacatggatgt--tgagtttgtttacagattcatcttttttgtttttagcaaatttgtattgcatc 17325375  T
Q  103 gatatactctatcaatttaaatgaataaatatc 135  Q
    ||| || ||||||||||| ||||||| ||||||    
T  17325374 gatgtaatctatcaatttgaatgaatgaatatc 17325342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 19645838 - 19645710
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    |||||| |||||| |||||||||||||||| | ||||||||||| ||||  || |||||||  || | |||| |||||||||||||| ||| ||| ||||    
T  19645838 tttgtattttgtcgttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgtttttagcgaatttgcattatatcgatgtact 19645739  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
     |||| |||| ||||||| |||||||||||    
T  19645738 -tatcgatttgaatgaatgaatatcattta 19645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 31646142 - 31646270
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  31646142 ttgtactttgccgttttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 31646241  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  31646242 tatcaatttgaatgaatgaatatctttta 31646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 20271024 - 20271151
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattca-tcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| |||||||||| |||||||||||||||| | ||||||||||||||||  || ||||| ||  || | |||| ||||||||| |||||||| ||| |    
T  20271024 ctttagtactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcattcttttttgtttttagcgaattttcattgtatcgatgt 20271123  T
Q  108 actctatcaatttaaatgaataaatatc 135  Q
    ||||||  ||||| ||||||| ||||||    
T  20271124 actctactaatttgaatgaatgaatatc 20271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 35906582 - 35906710
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatatact 110  Q
    ||||| |||||| |||||||||||||||| | ||| ||||||  ||||  || |||||| |||| |  |||| |||||||||||||| ||||||| ||||    
T  35906582 ttgtattttgtcgttttatgctattaacatggatgatgtgagcctgttcacatattcat-acttttagtttttagcgaatttgcattatattgatgtact 35906680  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||| ||||    
T  35906681 ctatcaatttgaatgaatgaatatctttta 35906710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 42505201 - 42505072
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga----atttgcattgtattgatatact 110  Q
    |||| |||| ||| |||||||||||| | |||||||||||||||| ||| |||||||  || | |||| || ||    ||||| ||||||||||| ||||    
T  42505201 tactctgtcgtttcatgctattaacatggatgttgtgagtttgttcgcagattcatcctttttgtttttagagactgaatttgtattgtattgatgtact 42505102  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||| ||||    
T  42505101 ctatcaatttgaatgaatgaatatcgttta 42505072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 17218042 - 17218164
Alignment:
Q  17 ctttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatca 116  Q
    ||||| ||||||||  |||||||| | |||||||||| |||||   | |||||||  ||| ||||| |||||||||  ||||||| ||| ||||||||||    
T  17218042 ctttgccattttatattattaacatggatgttgtgagattgttcatagattcatcctttcgttttt-agcgaatttttattgtatcgatgtactctatca 17218140  T
Q  117 atttaaatgaataaatatcattta 140  Q
    |||| ||||||| |||||||||||    
T  17218141 atttgaatgaatgaatatcattta 17218164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 40775063 - 40775202
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| ||||||||||||||||   ||  | ||||||||||  ||  ||||||  ||   |||| ||| ||||| |||||||    
T  40775063 tgtgtaggctttagtactttgtcgttttatgctattaacatagatcctctgagtttgttcacatgttcatccttttaatttttagcaaattttcattgta 40775162  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  40775163 tcgatgtactctatcaatttgaatgaatgaatatcattta 40775202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 39591352 - 39591478
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||| |||||| ||||||| |||||||| | ||||| |||||||||| ||| ||||| |  || | |||| |   |||||| ||||||||    
T  39591352 tgtaggcttatgtattttgtcgttttatgttattaacatggatgttatgagtttgttcgcagattcaacctttttatttttaataaatttgtattgtatt 39591451  T
Q  103 gatatactctatcaatttaaatgaata 129  Q
    ||  |||||||||||||||||||||||    
T  39591452 gaggtactctatcaatttaaatgaata 39591478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 41358379 - 41358473
Alignment:
Q  44 atgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcatt 138  Q
    |||||||||||||||| ||| |||||||  || | |||| | ||||||| |||| ||| ||| |||||||||||||| ||||||| |||||||||    
T  41358379 atgttgtgagtttgttcgcatattcatccgttttgtttttaacgaatttacattatatcgatgtactctatcaatttgaatgaatgaatatcatt 41358473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 10923936 - 10923807
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||| ||||||||||||||||   | ||||||||  ||||  || |||||||  || | |||| | | | |||||||| ||||||| ||||    
T  10923936 tttgtactttgtcgttttatgctattaacatagacgttgtgagcctgttcacagattcatcctttttatttttaacaattttgcattatattgatgtact 10923837  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||| |||||| ||||    
T  10923836 ctatcaatttgaatgaatgaatatctttta 10923807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 128
Target Start/End: Complemental strand, 29310152 - 29310039
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctat 114  Q
    ||||||| | |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||| ||| ||||||||    
T  29310152 tactttgccgttttatgctattaacatggatgatgtgagcctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactctat 29310053  T
Q  115 caatttaaatgaat 128  Q
    |||||| |||||||    
T  29310052 caatttgaatgaat 29310039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 9034681 - 9034621
Alignment:
Q  77 ttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcat 137  Q
    |||||| |||||||||||||||||| ||| |||||||||||||| |||||||  |||||||    
T  9034681 tttttttagcgaatttgcattgtatcgatgtactctatcaatttgaatgaatggatatcat 9034621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 25770910 - 25771051
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||||||||||||||| ||||||| | |||  ||||||||||||| ||| || |||  ||| | |||| |||||||||| |||||||     
T  25770910 tgtaggcttatgtactttgtcattttattctattaagatgaacattgtgagtttgttcgcagatccataccttttatttttagcgaatttgtattgtatc 25771009  T
Q  103 ----gatatactctatcaatttaaatgaataaatatcattta 140  Q
        ||| |||||||||||||| ||| ||| |||||| ||||    
T  25771010 aatcgatgtactctatcaatttgaataaatgaatatccttta 25771051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32390476 - 32390380
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt 97  Q
    |||||| | |||||||||||||| |||||||||||||||| | ||  |||||||||||| ||| |||||||  || | |||| || |||||||||||    
T  32390476 tgtgtaggtttttgtactttgtcgttttatgctattaacatggatactgtgagtttgttcgcagattcatcctttttatttttagtgaatttgcatt 32390380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 6281385 - 6281507
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| |||||||||| |||      |||| ||||||||||||||||    
T  6281385 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatatactctatcaat 6281484  T
Q  119 ttaaatgaataaatatcatttac 141  Q
    || ||||||| |||||| |||||    
T  6281485 ttgaatgaatgaatatcgtttac 6281507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 12439480 - 12439354
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat-tgatatactct 112  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||  || ||| |||| || | |||| |||||||||| ||| ||| | ||||||| |    
T  12439480 gtactttgtcgttttatgctattaacatggatgatgtgagtttgttcacagatttatcatttttatttttagcgaatttgaatt-tatattatatacttt 12439382  T
Q  113 atcaatttaaatgaataaatatcattta 140  Q
    ||||| || ||||||| |||||| ||||    
T  12439381 atcaagttgaatgaatgaatatcgttta 12439354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 26294854 - 26294740
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt------gcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||| || | |||| |||||||||      | ||||||| ||||||||||||||||    
T  26294854 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcatttttgtttttagcgaatttagatttgtattgtatcgatatactctatcaat 26294755  T
Q  119 ttaaatgaataaata 133  Q
    || ||||||| ||||    
T  26294754 ttgaatgaatgaata 26294740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 42781337 - 42781463
Alignment:
Q  20 tgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgatatactcta 113  Q
    |||| |||||||||||||||| | ||||||||||||||||  ||||||||||  || | |||| |||      ||||||| ||||||| |||  ||||||    
T  42781337 tgtcgttttatgctattaacatggatgttgtgagtttgttaacaaattcatcctttttatttttagcgactttgaatttgtattgtatcgatgcactcta 42781436  T
Q  114 tcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||| |||||||||| ||||    
T  42781437 tcaatttgaataaataaatatcgttta 42781463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 4726738 - 4726676
Alignment:
Q  78 tttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||||||||| |||  || |||||||||||||| ||||||| |||||||||||    
T  4726738 ttttttagcgaatttgcattatatcaatgtactctatcaatttgaatgaatgaatatcattta 4726676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 17732178 - 17732046
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  || ||||||| ||| | |||| || ||      ||||| ||||||| |||     
T  17732178 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatctctt-tgtttttagtgaatttggatttgtattgtatcgatg 17732080  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||| | |||||||||||    
T  17732079 tactctatcaatttgaatgagtgaatatcattta 17732046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 39179637 - 39179591
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||    
T  39179637 tgtactttgtcgttttatgctattaacatggatgttgtgagtttgtt 39179591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 39416058 - 39415926
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgata 106  Q
    |||||| ||||||||| ||||||||| | | || ||||||||||||||| | ||||||| ||||||||| ||||      |||| || ||||||| |||     
T  39416058 tgtactctgtcattttttgctattaaaatggattttgtgagtttgtttgaatattcatc-cttctttttccagcgactttgaatatgtattgtatcgatg 39415960  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    ||||  |||||||| |||||||||||||| ||||    
T  39415959 tacttaatcaatttgaatgaataaatatcgttta 39415926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 6012840 - 6012720
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaatt 119  Q
    |||||| ||||||||   |||||||||||||||||||||||||||   || | |||| |||||      ||||| |||||||| || |||||||||||||    
T  6012840 tttatgttattaacattgatgttgtgagtttgtttgcaaattcattcattttatttttagcgactttgaatttgtattgtattaatgtactctatcaatt 6012741  T
Q  120 taaatgaataaatatcattta 140  Q
    ||||| ||| | |||||||||    
T  6012740 taaattaatgattatcattta 6012720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 20483515 - 20483648
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtatt-----gata 106  Q
    ||||||||  |||||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||| | |||||||     |||     
T  20483515 tgtacttttccattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatg 20483614  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||| ||||| ||||||| |||||| ||||    
T  20483615 tactctattaatttgaatgaatgaatatcgttta 20483648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 25962235 - 25962276
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagttt 56  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  25962235 tactttgtcgttttatgctattaacatgaatgttgtgagttt 25962276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28662372 - 28662505
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||| |||| | |||||||||||||||| | ||||| || |||||||   | | |||||| || | |||| ||||||||| |||||||    
T  28662372 tgtgtaggctttagtattttgccgttttatgctattaacatggatgttatgtgtttgttcatagactcatcatttttgtttttagcgaattttcattgta 28662471  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||  |||||| ||||||| ||||||| |||||    
T  28662472 tcgacgtactctttcaatttgaatgaatgaatat 28662505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 39915789 - 39915838
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgc 62  Q
    ||||||||||| |||||||||||||||| | ||||||| |||||||||||    
T  39915789 tgtactttgtcgttttatgctattaacatggatgttgtcagtttgtttgc 39915838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 8957515 - 8957635
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    |||| ||||||||||| ||||||| |||||||| ||||||||||| |||||   ||||||||||  || | |||| ||| || ||  |||| || ||| |    
T  8957515 gcttgtgtactttgtcgttttatgttattaacatgaatgttgtgaatttgtccacaaattcatcctttttgtttttagctaacttatattgcatcgatgt 8957614  T
Q  108 actctatcaatttaaatgaat 128  Q
    ||||||||||||  |||||||    
T  8957615 actctatcaattggaatgaat 8957635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 23881906 - 23881775
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatata 108  Q
    |||||||||  ||||||||||||||| | |||||||||||||||   ||||||||||  || | ||||  ||||      ||||| ||||||| ||| ||    
T  23881906 tactttgtcggtttatgctattaacatggatgttgtgagtttgtccacaaattcatcctttttcttttttgcgaatttggatttgtattgtatcgatgta 23881807  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||| ||||    
T  23881806 ctctatcaatttgaatgaatgaatatcgttta 23881775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 28041040 - 28041092
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||| ||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  28041040 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcttttac 28041092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 29098121 - 29098189
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||||||||||| | ||| ||||||||||||  |||||||||| ||| | |||| ||||||||||    
T  29098121 ttttatgctattaacatgtatgatgtgagtttgttcacaaattcatcccttttgtttttagcgaatttg 29098189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 6074524 - 6074421
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||| ||||||||||| | ||||||||||||||||   | |||||||  || | |||| |||||||||| |||| || ||| |||||||||||| | |||    
T  6074524 ttttgtgctattaacatggatgttgtgagtttgttcatagattcatcctttttgtttttagcgaatttgtattgcatcgatgtactctatcaatgtgaat 6074425  T
Q  125 gaat 128  Q
    ||||    
T  6074424 gaat 6074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 17699883 - 17699962
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||||    
T  17699883 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttg 17699962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 11734637 - 11734504
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgata 106  Q
    ||||||||| | |||||||||||||||| |  |||||||||||||||  || |||||||  || | |||| |||      ||||||| ||||||| |||     
T  11734637 tgtactttgccgttttatgctattaacatggttgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatg 11734538  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||| ||||||||| ||||||| |||||| ||||    
T  11734537 tactttatcaatttgaatgaatgaatatcgttta 11734504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 17566250 - 17566204
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||||||||||| | | ||||| ||||||||||||||||||||||    
T  17566250 ttttatgctattaaaatggatgttatgagtttgtttgcaaattcatc 17566204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 28423771 - 28423709
Alignment:
Q  78 tttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||||||||||| |||  || |||| ||||||||| ||||||| |||||||||||    
T  28423771 ttttttagcgaatttgcattatatcaatgtactatatcaatttgaatgaatgaatatcattta 28423709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 31255064 - 31255006
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||| | |||||||||| |||||| |  ||||||||||||||||||||| |||||||    
T  31255064 tgtactctatcattttatgttattaaaataaatgttgtgagtttgtttgcagattcatc 31255006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 39531204 - 39531146
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    ||||||||| | |||||||||||||||| | ||| ||||||||||||  ||||||||||    
T  39531204 tgtactttgccgttttatgctattaacatggatgatgtgagtttgttcacaaattcatc 39531146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 43494203 - 43494249
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| | ||||||| |||||||||| ||||||||||||||||    
T  43494203 tgtactttgccgttttatgttattaacacggatgttgtgagtttgtt 43494249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 4070930 - 4070991
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||| ||| ||| |||||| ||||||| ||||||| |||||| ||||    
T  4070930 tttttagcgaatttgcattatatcgatgtactctttcaatttgaatgaatgaatatctttta 4070991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 13161686 - 13161731
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    |||||||||||||||| ||||||||| |||||||| ||| ||||||    
T  13161686 ttttatgctattaacatgaatgttgtaagtttgttagcagattcat 13161731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 13161754 - 13161807
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||||||| |||||||||||||| | ||||| || ||||||||    
T  13161754 gaatttgtattgtattgatgtactctatcaattttagtgaatgaaaatcattta 13161807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 34000000 - 34000053
Alignment:
Q  88 aatttgcattgtattgat-atactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||| ||||||||||||||| ||| ||| ||||| |||||    
T  34000000 aatttgcattgtattgattatactctatcaatttgaataaatgaatattattta 34000053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 37986032 - 37985979
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||||| || ||||||||||||  ||||| |||||||||||||||| |||||||    
T  37986032 tttgtcgttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatc 37985979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 39558283 - 39558238
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    ||||||||||||||||  |||||||| | |||||||||||||||||    
T  39558283 ttttatgctattaacataaatgttgtcaatttgtttgcaaattcat 39558238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 32309827 - 32309883
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatc 71  Q
    |||| |||| |||||| ||||||||| | |||||||||||||||| ||| |||||||    
T  32309827 tactctgtcgttttatcctattaacatggatgttgtgagtttgttcgcagattcatc 32309883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 5e-27; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 43157079 - 43157217
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  43157079 tgtgtaggctttagtactttgtcgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaattttcattgta 43157178  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    | ||| |||||||||||||| ||| ||| ||||||||||    
T  43157179 tcgatgtactctatcaatttgaataaatgaatatcattt 43157217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 4622515 - 4622377
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || || |||||||||| |||||||||||||||| | ||| |||||||||||| ||||||||||| | | | |||| ||| |||||||||||||    
T  4622515 tgtgtaggcgttcgtactttgtcgttttatgctattaacatggatgatgtgagtttgttcgcaaattcatctcgt-tgtttttagcaaatttgcattgta 4622417  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    || || |||||||||||||| ||| ||| |||||||||||    
T  4622416 ttaatgtactctatcaatttcaataaatgaatatcattta 4622377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7242598 - 7242459
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||||||| |||||| |||||| ||||||||| | ||||||| ||||| ||  || |||||||  || | |||| |||||||||||||||||    
T  7242598 tgtgtaggcttttgtattttgtcgttttatactattaacatggatgttgtaagtttattcacagattcatcttttttgtttttagcgaatttgcattgta 7242499  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||||||| ||| |||||||||||    
T  7242498 tcgatgtactctatcaatttaaataaatgaatatcattta 7242459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29576933 - 29576794
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||| ||| | |||||| |||| || | | |||||||||||||||||| | |||||||| || | || | ||| |||||||||||||    
T  29576933 tgtgtaggcttttgtaccttgccgttttatactataaagagggatgttgtgagtttgtttgtagattcatcatttttgttattagcaaatttgcattgta 29576834  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||| ||||||||| ||||||| |||||||||||    
T  29576833 ttgatatactttatcaatttgaatgaatgaatatcattta 29576794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 9 - 140
Target Start/End: Complemental strand, 29474132 - 29474001
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatata 108  Q
    |||| |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||| |||||||||||| ||    
T  29474132 ctttagtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaattttcattgtattgatgta 29474033  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    ||||| |||||| ||||||| |||||| ||||    
T  29474032 ctctaccaatttgaatgaatgaatatctttta 29474001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 38434900 - 38435039
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| ||||||||||||||||||||||||||| | ||| ||||||||||||| || |||||||  || | ||||  || ||||| |||| ||    
T  38434900 tgtgtaggctttagtactttgtcattttatgctattaacatggatgatgtgagtttgtttacagattcatcctttttatttttggcaaattttcattata 38434999  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||| ||||    
T  38435000 tcgatgtactctatcaatttgaatgaatgaatatcgttta 38435039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46775670 - 46775531
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||| ||||||| ||||||||||||||||   |||||||||||||||||||| ||||| |  || | |||| |||||||||||||| ||    
T  46775670 tgtgtaggcttttgtgctttgtcgttttatgctattaacatagatgttgtgagtttgtttgcatattcagcctttttgttttgagcgaatttgcatttta 46775571  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||||| |  ||||||||| ||||||| ||||| |||||    
T  46775570 tcgatattccttatcaatttgaatgaatgaatatgattta 46775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 30416427 - 30416300
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt--ttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||| | |||||||||||||||| | ||| ||||||||||||  || ||||||| ||| ||  |||| ||||||||| |||||||| ||| |||||    
T  30416427 gtactttgccgttttatgctattaacatggatgatgtgagtttgttcacagattcatc-ctttttcgtttttagcgaattttcattgtatcgatgtactc 30416329  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||||||| |||||||||||    
T  30416328 tatcaatttaaatgaatgaatatcattta 30416300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31311772 - 31311909
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||| |||||||| ||| ||||||||  | | |||| |  |||||| |||||||    
T  31311772 tgtgtaggcttttgtactttgtcgttttatgctattaacatggatgttgt-agtttgttcgcatattcatcatctttgtttttaatgaatttacattgta 31311870  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
     | ||||||| ||||||||| ||||||| |||||||||||    
T  31311871 -tcatatactatatcaattttaatgaatgaatatcattta 31311909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23002744 - 23002612
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||| | |||||||||||||||| | ||||||||||  ||||  || ||||||| ||| || ||| |||||||||||||| ||    
T  23002744 tgtgtaggcatttgtactttgccgttttatgctattaacatggatgttgtgagcctgttcacagattcatc-ctttttgttttagcgaatttgcattata 23002646  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||||||||||| ||||||| |||||    
T  23002645 tcgatgtactctatcaatttgaatgaatgaatat 23002612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 4634596 - 4634724
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||||| |||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  4634596 ttgtactttgtcgttttatgctattaacatggatgatgtgagcatgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 4634695  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  4634696 tatcaatttgaatgaatgaatatctttta 4634724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 9662166 - 9662294
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| ||||||| ||||  || |||||||  || | |||| |||||||||||||| ||| ||| |||||    
T  9662166 ttgtactttgccgttttatgctattaacatggatgatgtgagtctgttcacatattcatcctttttgtttttagcgaatttgcattatatcgatgtactc 9662265  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  9662266 tatcaatttgaatgaatgaatatctttta 9662294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 2945472 - 2945579
Alignment:
Q  33 tattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaat 132  Q
    |||||||| | ||| |||||||||||| ||| |||||||  || | |||| ||||||||||||| |||| ||| |||||||||||||| ||||||| |||    
T  2945472 tattaacatggatgctgtgagtttgttcgcatattcatcctttttgtttttagcgaatttgcatcgtatcgatgtactctatcaatttgaatgaattaat 2945571  T
Q  133 atcattta 140  Q
    ||||||||    
T  2945572 atcattta 2945579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 14346733 - 14346872
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | |||||||||||||||| | ||| ||||||||||||  |  |||||||   | | |||| ||||||||| |||||||    
T  14346733 tgtgtaggctttagtactttgccgttttatgctattaacatggatgctgtgagtttgttcacggattcatcctctttgtttttagcgaattttcattgta 14346832  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||| ||||    
T  14346833 tcgatgtactctatcaatttgaatgaatgaatatcgttta 14346872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23067660 - 23067521
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||  ||||  ||||||||||  || | |||| |||||||||||||| ||    
T  23067660 tgtgtaggcctttgtaccttgccgttttatgctattaacatggatgttgtgagcctgttcacaaattcatcctttttgtttttagcgaatttgcattata 23067561  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| ||||||| ||||| |||||    
T  23067560 tcgatgtactctgtcaatttgaatgaatgaatataattta 23067521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46728732 - 46728593
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | ||||||  |||||||| | ||| ||||||||||||  || |||||||  || | |||| ||||||||| |||||||    
T  46728732 tgtgtaggctttagtactttgccgttttatattattaacatggatgctgtgagtttgttcacagattcatcctttttgtttttagcgaattttcattgta 46728633  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| ||||||| |||||| ||||||| |||||||||||    
T  46728632 tcgatgtactctaccaatttgaatgaattaatatcattta 46728593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 34668499 - 34668627
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    |||||| |||| | |||||| ||||||||| | ||| ||||||| ||||  ||||||||||  || | |||| ||| |||||||||| ||| ||| ||||    
T  34668499 tttgtattttgccgttttat-ctattaacatggatgctgtgagtctgttcacaaattcatcctttttgtttttagcaaatttgcattatatcgatgtact 34668597  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
     |||||||||||||||||||||||||||||    
T  34668598 ttatcaatttaaatgaataaatatcattta 34668627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9474351 - 9474211
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgt 99  Q
    |||||| || ||||||||||| |||||||||||||||||  | ||||||||||  ||||  || | |||||  || || |||| |||||||||||||| |    
T  9474351 tgtgtaggcatttgtactttgccattttatgctattaacgtggatgttgtgagcctgttcacatactcatccttttttgtttttagcgaatttgcattat 9474252  T
Q  100 attgatatactctatcaatttaaatgaataaatatcattta 140  Q
    || ||| |||||||||||||| |||||| ||||||| ||||    
T  9474251 atcgatgtactctatcaatttgaatgaaaaaatatctttta 9474211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 16992198 - 16992312
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaat 124  Q
    |||||||||||||||| | |||||||||| |||||  || |||||||  || | |||| ||||| ||| |||||||| ||| |||||||||||||| |||    
T  16992198 ttttatgctattaacatggatgttgtgaggttgttcacatattcatcctttttgtttttagcgagttttcattgtatcgatgtactctatcaattt-aat 16992296  T
Q  125 gaataaatatcattta 140  Q
    |||||||||| |||||    
T  16992297 gaataaatattattta 16992312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 29589173 - 29589034
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||||||||| |||||||||| |||||||||||||||| | ||| ||||| ||||||  || |||||||  || | |||| | ||||||| ||||| |    
T  29589173 tgtgtatgctttagtactttgtcgttttatgctattaacatggatgatgtgaatttgttcacagattcatcctttttgtttttaacgaattttcattgca 29589074  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |  || ||||| |||||||| ||||||| ||||| |||||    
T  29589073 tcaatgtactccatcaatttgaatgaatgaatattattta 29589034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 41486877 - 41487015
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| ||| |||||||||||| | ||||||||||  ||||  || |||||||  || | |||| |||||||||||||| |     
T  41486877 tgtgtaggcatttgtactttgtcgttt-atgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttagcgaatttgcattatt 41486975  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||| ||||    
T  41486976 tcgatgtactctatcaatttgaatgaatgaatatctttta 41487015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 53903881 - 53904020
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| |||||| ||||||||| | ||| ||||||  ||||  || |||||||  || | |||| |||||||||||||| ||    
T  53903881 tgtgtaggcatttgtactttgtcgttttattctattaacatggatgctgtgagcctgttcacagattcatcctttttgtttttagcgaatttgcattata 53903980  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||| ||||||| ||||||| |||||| ||||    
T  53903981 tcgatgtactctttcaatttgaatgaatgaatatctttta 53904020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 11210105 - 11209972
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg------cattgtattgata 106  Q
    ||||||||||| ||||||||||||| || | ||||||||||||||||  || |||||||  || | |||| || |||||||      ||||||||||||     
T  11210105 tgtactttgtcgttttatgctattatcatggatgttgtgagtttgttcacagattcatcctttatgtttttagtgaatttggatttgcattgtattgatg 11210006  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| ||||||| |||||| ||||    
T  11210005 tactctatcaatttgaatgaatgaatatctttta 11209972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 15729793 - 15729655
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||| | ||| | |||||||||| | ||| ||||||||||||  ||||||||||  || | || | ||| ||||| |||||||    
T  15729793 tgtgtaggctttagtactttgccgtttcacgctattaacatggatgctgtgagtttgttcacaaattcatcctttttgttgttagcaaattttcattgta 15729694  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattt 139  Q
    | ||| ||||||| |||||| ||||||| ||||||||||    
T  15729693 tcgatgtactctaccaatttgaatgaatgaatatcattt 15729655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 50981524 - 50981399
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtat 101  Q
    |||| |||| ||||||||||  ||||||| |||||||| | ||||||||||||||||  ||||||||| |||| || |||| |||||||||| |||| ||    
T  50981524 tgtaggcttatgtactttgttgttttatgatattaacatggatgttgtgagtttgttcacaaattcat-actttttgtttttagcgaatttgtattgcat 50981426  T
Q  102 tgatatactctatcaatttaaatgaat 128  Q
     ||| |||| ||||||||| |||||||    
T  50981425 cgatgtactatatcaatttgaatgaat 50981399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 5388817 - 5388942
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||  | ||||||||||||| || | ||||||||||||||||  || |||||||  || | |||| | |||||||| ||||||      
T  5388817 tgtaggcttatgtacttttccgttttatgctattagcatggatgttgtgagtttgttcacagattcatcctttatatttttaacgaatttgtattgtagc 5388916  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| ||||||||||||||||||||||    
T  5388917 gatgtactctatcaatttaaatgaat 5388942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 6082231 - 6082111
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| | |||||||| | ||||| ||| ||||||    
T  6082231 tgtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcttttttgtttttaacgaatttgga-tgtatcgatgtactct 6082133  T
Q  113 atcaatttaaatgaataaatat 134  Q
    |||||||| ||| |||||||||    
T  6082132 atcaatttgaataaataaatat 6082111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 28990608 - 28990730
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgt----attga 104  Q
    ||||||||||||||  |||||||||||||||| | |||||||||||||||| ||| ||| |||  || | |||| | || |||||||||||    || ||    
T  28990608 cttttgtactttgttgttttatgctattaacatggatgttgtgagtttgttcgcagatttatcgtttttgtttttaacggatttgcattgtatcgatcga 28990707  T
Q  105 tatactctatcaatttaaatgaa 127  Q
    |||||||||||||| ||||||||    
T  28990708 tatactctatcaatctaaatgaa 28990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44375087 - 44374948
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||| ||| ||| |||||||||||||||| | | ||||||||||  ||||  || ||  |||| || | |||| | |||||||||||| ||    
T  44375087 tgtgtaggcatttctaccttgccattttatgctattaaaatggatgttgtgagcctgttcacagatctatcatttttgtttttaacgaatttgcattata 44374988  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||||||||| ||||||| |||||||||||    
T  44374987 tcgatgtactctatcaatttgaatgaatgaatatcattta 44374948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 46716706 - 46716567
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||| ||| | |||||||||||||||| | ||||||||||  ||||  || ||| |||  || | |||| ||||||||| |||| ||    
T  46716706 tgtgtaggcatttgtaccttgccgttttatgctattaacatggatgttgtgagcctgttcacagatttatcctttttatttttagcgaatttacattata 46716607  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||| ||||||||| ||||||| |||||||||||    
T  46716606 tcgatgtactatatcaatttgaatgaatgaatatcattta 46716567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 46829723 - 46829778
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcat 70  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  46829723 tactatgtcattttatgttattaacatgaatgttgtgagtttgtttgcagattcat 46829778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 8712837 - 8712970
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcga------atttgcattgtattgata 106  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||  ||||||||||  || || |||| || ||      ||||| ||||||| |||     
T  8712837 gtactttgtcgttttatgctattaacatggatgatgtgagtttgttcacaaattcatccttttttgtttttagtgaatttagatttgtattgtatcgatg 8712936  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||| |||||||||||||| ||||    
T  8712937 tactctatcaatttgaatgaataaatatcgttta 8712970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 20887549 - 20887416
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgata 106  Q
    ||||||||| | ||||||| |||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||||| |||      |||| |||     
T  20887549 tgtactttgccgttttatgatattaacatggatgttgtgagtttgttcacagattcatcttttttgtttttagcgaatttggatttatattgtatcgatg 20887450  T
Q  107 tactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||||||||| |||||| ||||    
T  20887449 tactctatcaatttaaatgaatgaatatcgttta 20887416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 9781612 - 9781559
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttg 61  Q
    ||||||||||||||  ||||||||||||||| | ||||||||||||||||||||    
T  9781612 gcttttgtactttggtattttatgctattaagatgaatgttgtgagtttgtttg 9781559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 23926345 - 23926462
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| ||||||||| | ||| ||||||||||||   ||||||||||||||||  || |||||||  || | |||| |||||||||| |||||||     
T  23926345 tgtaggcttatgtactttgccgtttgatgctattaacatagatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgtattgtatc 23926444  T
Q  103 gatatactctatcaattt 120  Q
     || ||||||||||||||    
T  23926445 aatgtactctatcaattt 23926462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 25658496 - 25658617
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactct 112  Q
    ||||||||| | ||||||||||| |||| | ||||||||||||||||  ||||||||| | || | |||| |||||||||| |||||||  || || | |    
T  25658496 tgtactttgccgttttatgctatcaacatggatgttgtgagtttgttcacaaattcattatttttgtttttagcgaatttgtattgtatcaatgtatttt 25658595  T
Q  113 atcaatttaaatgaataaatat 134  Q
     ||||||| ||||||| |||||    
T  25658596 gtcaatttgaatgaatgaatat 25658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 26674704 - 26674821
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||||||||||||||||  || |||||||| || | |||| |||||      ||||| ||||||| ||||||||||||||||    
T  26674704 ttttatgctattaacatggatgttgtgagtttgttcacagattcatcatttttatttttagcgaattgagatttgtattgtatcgatatactctatcaat 26674803  T
Q  119 ttaaatgaataaatatcattta 140  Q
    |    |||||||||||||||||    
T  26674804 t----tgaataaatatcattta 26674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 37869229 - 37869097
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || ||||||||||||| ||||||| |||||||| | ||||||||||  ||||  || ||||||| ||| | |||| |  ||||||||||| ||    
T  37869229 tgtgtaggcatttgtactttgtcgttttatgttattaacatggatgttgtgagcctgttcacatattcatc-cttttgtttttaatgaatttgcattata 37869131  T
Q  101 ttgatatactctatcaatttaaatgaataaatat 134  Q
    | ||| |||||||||||||| ||| ||| |||||    
T  37869130 tagatgtactctatcaatttgaataaatgaatat 37869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 12519972 - 12520060
Alignment:
Q  52 agtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||| ||| |||||||  || | |||| |||||||||||||||||| ||| |||||||| ||||| ||| ||| |||||||||||    
T  12519972 agtttgttcgcagattcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaatttgaataaatgaatatcattta 12520060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 140
Target Start/End: Complemental strand, 19885771 - 19885639
Alignment:
Q  8 gcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatat 107  Q
    ||||||||||||||||  || ||| |||||||| |  || |||||||||||| ||| ||||||   || | |||| ||| |||||  |||||||||||||    
T  19885771 gcttttgtactttgtcgcttcatgatattaacatggctgctgtgagtttgttcgcagattcattctttttgtttttagcaaatttaaattgtattgatat 19885672  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||| ||||||||| ||| ||| ||||| |||||    
T  19885671 actgtatcaatttgaataaatgaatataattta 19885639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 24568502 - 24568379
Alignment:
Q  18 tttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg------cattgtattgatatactc 111  Q
    |||| |||||||||||||||||| ||||||||||||||||||  || |||||||  || | |||| ||||||||||       ||||||| ||| || ||    
T  24568502 tttgccattttatgctattaacatgaatgttgtgagtttgttcacatattcatcctttttgtttttagcgaatttgaatttatattgtatcgatgtaatc 24568403  T
Q  112 tatcaatttaaatgaataaatatc 135  Q
    ||||||||| ||||||| ||||||    
T  24568402 tatcaatttgaatgaatgaatatc 24568379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 40198332 - 40198216
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattgatatactctatcaatttaaa 123  Q
    ||||||| |||||||| |||||||||||||||||| | | | |||||| || | |||| | ||| |||| | |||||||||| |||||||||| ||| ||    
T  40198332 ttttatgttattaacaggaatgttgtgagtttgttcgtagactcatcatttttgtttttaacgactttgaatttgtattgatgtactctatcattttgaa 40198233  T
Q  124 tgaataaatatcattta 140  Q
    ||||  |||||||||||    
T  40198232 tgaaagaatatcattta 40198216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 6789680 - 6789569
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttctt-ttttcagcgaatttgcattgtattgatata 108  Q
    ||||| |||||||  |||||||||||||||| | ||||||||||||| || ||| |||||||  ||  | |||| ||||||||||||||||| ||||  |    
T  6789680 ttttgaactttgttgttttatgctattaacatggatgttgtgagtttattcgcagattcatccttttatgtttttagcgaatttgcattgtagtgatgca 6789581  T
Q  109 ctctatcaattt 120  Q
    |||||| |||||    
T  6789580 ctctattaattt 6789569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 40861240 - 40861359
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| ||||| |||||||||| |||||||||||||||| | ||| || |||||||||   | |||||||  ||   |||| | ||||||| |||||||    
T  40861240 tgtgtaagctttagtactttgtcgttttatgctattaacatggatgatgcgagtttgttcatagattcatccttttcgtttttaacgaattttcattgta 40861339  T
Q  101 ttgatatactctatcaattt 120  Q
    | ||| ||||||||||||||    
T  40861340 tcgatgtactctatcaattt 40861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 46268076 - 46268127
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  46268076 atttgtattgtatcgatgtactctatcaatttaaatgaataaatatcgttta 46268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 54420552 - 54420413
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| || |||||||||||   |||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| || ||||||||||| ||    
T  54420552 tgtgtaagcatttgtactttgatgttttatgctattaacatggatgttgtgagcctgttcacagattcatcctttttgtttttagtgaatttgcattata 54420453  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||| | ||||||| ||||||| |||||| ||||    
T  54420452 tcgatgtactatttcaatttgaatgaatgaatatctttta 54420413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 23963984 - 23964042
Alignment:
Q  9 cttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaatt 67  Q
    ||||||||||||||| |||||||| ||||||| ||| | |||||||||||| |||||||    
T  23963984 cttttgtactttgtcgttttatgcgattaacatgaaagatgtgagtttgttcgcaaatt 23964042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 31522287 - 31522408
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaat------ttgcattgtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||||||      ||| ||||||| ||| ||||||||||||    
T  31522287 ttttatgctattaacaaggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttggacttgtattgtatcgatgtactctatcaat 31522386  T
Q  119 ttaaatgaataaatatcattta 140  Q
    || ||||||| |||||| ||||    
T  31522387 ttgaatgaatgaatatcgttta 31522408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 39797299 - 39797416
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc--gaatttgcattgtattgatatactctatcaatttaa 122  Q
    ||||||| |||||||| ||||||||||||||||||  |||||| | || || |||  | ||   ||||||  |||||||  |||||||||||||||||||    
T  39797299 ttttatgatattaacatgaatgttgtgagtttgttctcaaatttaacatttttttaatgagtttgaatttatattgtatacatatactctatcaatttaa 39797398  T
Q  123 atgaataaatatcattta 140  Q
    |||||| |||||| ||||    
T  39797399 atgaatgaatatcgttta 39797416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 626350 - 626218
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | |||||||||| |||||  || |||||||  || | |||| |||      ||||||| ||||||| ||| |    
T  626350 gtactttgccgttttatgctattaacatggatgttgtgagcttgttcacatattcatcctttttgtttttagcaaatttgaatttgtattgtatcgatgt 626251  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| ||| |||||||    
T  626250 actctatcaatttgaatgaatgaatttcattta 626218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 7083612 - 7083480
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg------cattgtattgatat 107  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||||       ||||||| ||| |    
T  7083612 gtactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttatttttagcgaatttgaatttatattgtatcgatgt 7083513  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| | ||||| |||||| ||||    
T  7083512 actctatcaatttgagtgaatgaatatcgttta 7083480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 33020737 - 33020612
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtatt 102  Q
    |||| |||| |||||||||||||||||||||||||||| | |||| |||| ||||||  || |||||||  || | |||| || ||||||  |||   |     
T  33020737 tgtaggcttatgtactttgtcattttatgctattaacatggatgtcgtgaatttgttaacagattcatcctttttgtttttagggaatttatattacttc 33020638  T
Q  103 gatatactctatcaatttaaatgaat 128  Q
    ||| |||||||||||||| |||||||    
T  33020637 gatgtactctatcaatttgaatgaat 33020612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 39837924 - 39838056
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatat 107  Q
    |||||||| | ||||||||||||| || | ||||||||||||||||  || |||||||  || | |||| ||| |||||| |||      ||||||||||    
T  39837924 gtactttgccgttttatgctattaccatggatgttgtgagtttgttcacagattcatcctttttgtttttagcaaatttggatttctattgtattgatat 39838023  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    |||||| |||||| ||||||| |||||| ||||    
T  39838024 actctaacaatttgaatgaatgaatatcgttta 39838056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 43244160 - 43244040
Alignment:
Q  26 tttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcga------atttgcattgtattgatatactctatcaatt 119  Q
    ||||||||||||||| | ||||||||||||||||| || |||||||  || | |||| |||||      ||||| ||||||| | | |||||||||||||    
T  43244160 tttatgctattaacatggatgttgtgagtttgtttacagattcatcctttttgtttttagcgaatttggatttgtattgtatcggtgtactctatcaatt 43244061  T
Q  120 taaatgaataaatatcattta 140  Q
    | ||||||| |||||| ||||    
T  43244060 tgaatgaatgaatatcgttta 43244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 46267996 - 46268041
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||    
T  46267996 gtactttgtcgttttatgctattaacatggatgttgtgagtttgtt 46268041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 3673792 - 3673848
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||| |||| ||||||||| | |||||||||||||||| | ||||||||||||||||    
T  3673792 tgtaggcttgtgtactttgccgttttatgctattaacatggatgttgtgagtttgtt 3673848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 7060644 - 7060776
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattg-----atat 107  Q
    ||||||| || |||||||||||||||| | ||||||||||||||||  ||  ||||||  || | |||| |||||||||| | ||||||||     || |    
T  7060644 gtactttatcgttttatgctattaacatggatgttgtgagtttgttcacattttcatcctttttgtttttagcgaatttggatttgtattgtatcaatgt 7060743  T
Q  108 actctatcaatttaaatgaataaatatcattta 140  Q
    ||||||||||||| ||||||| |||||| ||||    
T  7060744 actctatcaatttgaatgaatgaatatcgttta 7060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 14542313 - 14542185
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| | |||||||||||||||| | ||| | ||||  ||||  || |||||||  || | |||| ||||||||| |||| ||| ||| || ||    
T  14542313 ttgtactttgccgttttatgctattaacatggatgatatgagcctgttcacatattcatcctttttgtttttagcgaatttacattatatcgatgtattc 14542214  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  14542213 tatcaatttgaatgaatgaatatctttta 14542185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 22757426 - 22757493
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||||||||||| | ||||||||||||||||  || ||||||| ||| |||||| ||||||||||    
T  22757426 ttttatgctattaacatggatgttgtgagtttgttcacagattcatc-cttttttttttagcgaatttg 22757493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 35658331 - 35658251
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||||||  |||||||||||||||| | ||| ||||||||||||   |||||||||| || | |||| ||||||||||    
T  35658331 tgtactttgttgttttatgctattaacatggatgatgtgagtttgttcataaattcatcatttttatttttagcgaatttg 35658251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 38943947 - 38943816
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatata 108  Q
    ||||||||| |||||||||||||||| | ||| | ||||||||||  || |||||||  || | |||| |||| ||||| |||      |||| ||| ||    
T  38943947 tactttgtcgttttatgctattaacatggatgatatgagtttgttcacagattcatcctttttgtttttagcggatttggatttgtattgtatcgatgta 38943848  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||||||||    
T  38943847 ctctatcaatttgaatgaatgaatatcattta 38943816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 42197884 - 42198015
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgatata 108  Q
    ||||||||| |||||||||||| ||| | ||||||||||||||||  || || ||||  || | |||| |||      ||||||| ||||||| ||| ||    
T  42197884 tactttgtcgttttatgctattgacatggatgttgtgagtttgttcacagatccatcctttttgtttttagcaaatttgaatttgtattgtatcgatgta 42197983  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||| ||||||| |||||| ||||    
T  42197984 ctctatcaatttgaatgaatgaatatcgttta 42198015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 52555552 - 52555456
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt 97  Q
    |||||| || ||||||| ||||  |||||||||||||||| | ||||||||||| ||||  || |||||||  || | |||| ||||||||||||||    
T  52555552 tgtgtaggcatttgtaccttgtacttttatgctattaacatggatgttgtgagtctgttcacagattcatcctttttgtttttagcgaatttgcatt 52555456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 477812 - 477733
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    |||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| ||||||||||    
T  477812 gtactttgacgttttatgctattaacatggatgttgtgagtttgttcacagattcatcgtttttgtttttagcgaatttg 477733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 6912021 - 6912135
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatatactctatcaat 118  Q
    |||||||||||||||| | ||| ||||||||||||  || |||||||  || | |||| |||||||||| |||      |||||||| ||||||||||||    
T  6912021 ttttatgctattaacatggatgatgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaat 6912120  T
Q  119 ttaaatgaataaata 133  Q
    || ||||||| ||||    
T  6912121 ttgaatgaatgaata 6912135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 18502552 - 18502501
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| |||||||||||||||||||||| |||||| ||||    
T  18502552 atttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgttta 18502501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 19745801 - 19745852
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| |||||||||||||||||||||||| | |||||| ||||    
T  19745801 atttgtattgtatcgatatactctatcaatttaaatgattgaatatcgttta 19745852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 19794005 - 19793954
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| |||||||||||||||||||||||| | |||||| ||||    
T  19794005 atttgtattgtatcgatatactctatcaatttaaatgattgaatatcgttta 19793954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 24100544 - 24100595
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  24100544 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcattta 24100595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 27091119 - 27091170
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||| ||||||| ||| |||||||||||||| |||||||||||||| ||||    
T  27091119 atttgtattgtatcgatgtactctatcaatttgaatgaataaatatcgttta 27091170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 38169962 - 38169831
Alignment:
Q  10 ttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgca-ttgtattgatata 108  Q
    |||| |||||||| ||||||||||||||||| | ||| | ||| |||||| ||| ||| |||  || | |||| ||| |||||||| ||| || ||| |     
T  38169962 ttttctactttgttattttatgctattaacatggatggtatgaatttgttcgcagatttatcttttttatttttagcaaatttgcatttggatcgatgtg 38169863  T
Q  109 ctctatcaatttaaatgaataaatatcattta 140  Q
    || ||||||||| ||||||| |||||||||||    
T  38169862 ctatatcaatttgaatgaattaatatcattta 38169831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 42032438 - 42032399
Alignment:
Q  28 tatgctattaacacgaatgttgtgagtttgtttgcaaatt 67  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  42032438 tatgctattaacttgaatgttgtgagtttgtttgcaaatt 42032399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 47466231 - 47466277
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||    
T  47466231 tgtactttgccgttttatgctattaacatggatgttgtgagtttgtt 47466277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 51152444 - 51152490
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||    
T  51152444 tgtactttgccgttttatgctattaacatggatgttgtgagtttgtt 51152490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 3169757 - 3169798
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaattt 120  Q
    |||| |||||||||||||||||| ||| ||||||||||||||    
T  3169757 tttttagcgaatttgcattgtatcgatgtactctatcaattt 3169798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 7008394 - 7008357
Alignment:
Q  102 tgatatactctatcaatttaaatgaataaatatcattt 139  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  7008394 tgatatacactatcaatttaaatgaatgaatatcattt 7008357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 20399694 - 20399649
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||    
T  20399694 gtactttgtcgttttatgctattaccatggatgttgtgagtttgtt 20399649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 22121841 - 22121894
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||||||| ||||||||||| |||||||| | |||||| ||||    
T  22121841 gaatttgtattgtattgatgtactctatcaaattaaatgattgaatatcgttta 22121894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 37431565 - 37431618
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||| ||||||||||||||||||||| |||  |||||| ||||    
T  37431565 gaatttgtattgtatcgatatactctatcaatttaaaagaaagaatatcgttta 37431618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 41837723 - 41837776
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| | ||||||||| |||||||||||||| ||||||||| |||| ||||    
T  41837723 gaatttgtagtgtattgatgtactctatcaatttgaatgaataattatcgttta 41837776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 56236535 - 56236490
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||||||    
T  56236535 attgtatcgatgtactctatcaatttgaatgaatgaatatcattta 56236490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 3171409 - 3171369
Alignment:
Q  19 ttgtcattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  3171409 ttgtcgttttatgctattaacatgtatgttgtgagtttgtt 3171369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 5814670 - 5814706
Alignment:
Q  23 cattttatgctattaacacgaatgttgtgagtttgtt 59  Q
    |||||||||||||||||| | ||||||||||||||||    
T  5814670 cattttatgctattaacatggatgttgtgagtttgtt 5814706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 6882355 - 6882407
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||| ||||||| ||| |||||||||||||| ||||||| |||||| |||||    
T  6882355 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttac 6882407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 24611508 - 24611456
Alignment:
Q  89 atttgcattgtattgatatactctatcaatttaaatgaataaatatcatttac 141  Q
    ||||| |||||||  || |||||||||||||| ||||||| ||||||||||||    
T  24611508 atttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcatttac 24611456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 26625417 - 26625493
Alignment:
Q  29 atgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgat 105  Q
    |||||||||||| | ||||| ||| ||| || ||| |||||||| || | |||| ||||||||| ||||||||||||    
T  26625417 atgctattaacaaggatgttatgaatttattcgcatattcatcatttttgtttttagcgaatttacattgtattgat 26625493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 56172142 - 56172198
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    ||||| ||||| ||||||| |||||||| | |||||||||||||||| ||| |||||    
T  56172142 tgtacattgtcgttttatgttattaacatggatgttgtgagtttgttcgcagattca 56172198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10141 - 10002
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| | ||||||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||||  ||   |||| | ||| |||| ||||||    
T  10141 tgtgtaggattttgtactttgctattttatgctattaacatggatgttgtgagtttgttcgcaaattcatccttttcgtttttatcgattttgtattgta 10042  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||  |||||||  ||||| ||||||  |||||||||||    
T  10041 ttgagttactctactaatttgaatgaaagaatatcattta 10002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 12005 - 11893
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    |||||||||||||||||||||||||||||| | ||| ||||||  ||||  || |||||||  || | |||| ||||||||||||||  || ||| ||||    
T  12005 tttgtactttgtcattttatgctattaacatggatgatgtgagcatgttcacagattcatcctttttgtttttagcgaatttgcattacatcgatgtact 11906  T
Q  111 ctatcaatttaaa 123  Q
    |||||||||||||    
T  11905 ctatcaatttaaa 11893  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 94115 - 93993
Alignment:
Q  11 tttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatact 110  Q
    ||||||||||||||||||||| |||||||| | ||||||||||| ||||  |||||| |||    |||||   | |||||||||||| ||| ||| ||||    
T  94115 tttgtactttgtcattttatgttattaacatggatgttgtgagtctgttcacaaatttatc----ctttt---aacgaatttgcattatatcgatgtact 94023  T
Q  111 ctatcaatttaaatgaataaatatcattta 140  Q
    || ||||||| ||||||| |||||| ||||    
T  94022 ctttcaatttgaatgaattaatatctttta 93993  T

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Target: scaffold0432 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 2232 - 2107
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctat 114  Q
    ||||||||| ||| |||||||||||| | ||  | ||||||||||  || |||||||  || | |||| |||||||||| ||||||| ||| |||| |||    
T  2232 tactttgtcgtttaatgctattaacatggatactatgagtttgttcacagattcatcctttttatttttagcgaatttgtattgtatcgatgtactttat 2133  T
Q  115 caatttaaatgaataaatatcattta 140  Q
    |||||| ||||||| |||||| ||||    
T  2132 caatttgaatgaatgaatatcgttta 2107  T

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Target: scaffold0090 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 11272 - 11227
Alignment:
Q  95 attgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  11272 attgtatcgatatactctatcaatttaaatgaattaatatcattta 11227  T

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Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 91148 - 91095
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||| |||||    
T  91148 gaatttgcattgtattaatgtactctatcaatttgaatgaataaatataattta 91095  T

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Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 91214 - 91161
Alignment:
Q  3 tgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagttt 56  Q
    |||| |||||||||||||||| ||  |||||||||||| |||||||||||||||    
T  91214 tgtaggcttttgtactttgtcgttcaatgctattaacatgaatgttgtgagttt 91161  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 201789 - 201736
Alignment:
Q  87 gaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    ||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||    
T  201789 gaatttgtattgtattgatttactctatcaatttaaatgaatgtatatcattta 201736  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 939 - 851
Alignment:
Q  52 agtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||||||| ||| |||||||  || | |||| |||||||||||||||||| ||| |||||||| ||||| ||| ||| |||||||||||    
T  939 agtttgttcgcagattcatcctttttatttttagcgaatttgcattgtatcgatgtactctataaatttgaataaatgaatatcattta 851  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 36837 - 36965
Alignment:
Q  12 ttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtattgatatactc 111  Q
    |||||||||| |||||||||||||||||| | ||||||||||  ||||  || |||||||  || | |||| | | ||||| |||| |||  || |||||    
T  36837 ttgtactttgccattttatgctattaacatggatgttgtgagcctgttcacatattcatcctttttgtttttaacaaatttacattatatcaatgtactc 36936  T
Q  112 tatcaatttaaatgaataaatatcattta 140  Q
    ||||||||| ||||||| |||||| ||||    
T  36937 tatcaatttgaatgaatgaatatctttta 36965  T

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Target: scaffold0321 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 6922 - 6788
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagc------gaatttgcattgtattgata 106  Q
    ||||||||  |||||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| |||      ||||||| ||||||| |||     
T  6922 tgtactttaccattttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatg 6823  T
Q  107 tactctatcaattt-aaatgaataaatatcattta 140  Q
    |||||||||||||| |||||||| |||||| ||||    
T  6822 tactctatcaatttgaaatgaatgaatatcgttta 6788  T

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Target: scaffold0294 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 3857 - 3725
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcatt------gtattgatata 108  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||  || |||||||  || | |||| | |||||||| |||      |||| ||| ||    
T  3857 tactttgccgttttatgctattaacatggatgttgtgagtttgttcacagattcatcctttttgtttttaccgaatttggatttgtattgtatcgatgta 3758  T
Q  109 ctctatcaatttaaatgaataaatatcatttac 141  Q
    |||||||||||| ||||||| |||||| |||||    
T  3757 ctctatcaatttgaatgaatgaatatcgtttac 3725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 48085 - 48024
Alignment:
Q  79 ttttcagcgaatttgcattgtattgatatactctatcaatttaaatgaataaatatcattta 140  Q
    |||| |||||||||||||| ||| ||| |||| ||||||||| || ||||||||||||||||    
T  48085 tttttagcgaatttgcattatatcgatgtactatatcaatttgaaagaataaatatcattta 48024  T

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Target: scaffold1350 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 1916 - 1992
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgtat 101  Q
    ||||||||||||||||   ||||||||||||||||  ||||||||||  || | |||| |||||||||| |||||||    
T  1916 ttttatgctattaacatagatgttgtgagtttgttcacaaattcatcttttttgtttttagcgaatttgtattgtat 1992  T

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Target: scaffold0999 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 2018 - 2098
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttg 93  Q
    ||||||||||| |||||||||||| ||| | ||| ||||||||||||  ||||||||||  || || ||| ||||||||||    
T  2018 tgtactttgtcgttttatgctattgacatggatgatgtgagtttgttcacaaattcatccttttttattttagcgaatttg 2098  T

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Target: scaffold1294 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1077 - 1116
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaaca 40  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  1077 tgtgtaggcttttgtactttgtcgttttatgctattaaca 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11588 - 11449
Alignment:
Q  1 tgtgtatgcttttgtactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaatttgcattgta 100  Q
    |||||| |||||  ||||||  |||||||||  | ||||| | ||||||||||||||||  || |||||||  || || ||| | ||||||| |||| ||    
T  11588 tgtgtaggctttaatactttaccattttatgtcactaacatggatgttgtgagtttgttaacagattcatccttttttattttaacgaattttcattata 11489  T
Q  101 ttgatatactctatcaatttaaatgaataaatatcattta 140  Q
    | ||| |||||||| ||||| ||||||| ||||| |||||    
T  11488 tcgatgtactctattaatttgaatgaatgaatattattta 11449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 6466 - 6509
Alignment:
Q  14 gtactttgtcattttatgctattaacacgaatgttgtgagtttg 57  Q
    |||||||||| |||||||||||||||| | ||||||||||||||    
T  6466 gtactttgtcgttttatgctattaacatggatgttgtgagtttg 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 20922 - 20969
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagtttgttt 60  Q
    ||||||||||| |||||||||||||||| | ||| |||||||||||||    
T  20922 tgtactttgtcgttttatgctattaacatggatgatgtgagtttgttt 20969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25312 - 25269
Alignment:
Q  13 tgtactttgtcattttatgctattaacacgaatgttgtgagttt 56  Q
    ||||||||| |||||||||||||||||| | |||||||||||||    
T  25312 tgtactttgccattttatgctattaacatggatgttgtgagttt 25269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 13035 - 12909
Alignment:
Q  15 tactttgtcattttatgctattaacacgaatgttgtgagtttgtttgcaaattcatcacttcttttttcagcgaattt-gcattgtattgatatactcta 113  Q
    ||||||| | ||||||||||||| || | ||||||||||||||||  || |||||||  || | |||| ||||||||| |  |||||| | | |||||||    
T  13035 tactttgccgttttatgctattatcatggatgttgtgagtttgttcacagattcatcttttttgtttttagcgaatttagatttgtatcgttgtactcta 12936  T
Q  114 tcaatttaaatgaataaatatcattta 140  Q
    | ||||| ||| ||| |||||||||||    
T  12935 ttaatttgaattaatgaatatcattta 12909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 1065 - 1012
Alignment:
Q  86 cgaatttgcattgtattgat----atactctatcaatttaaatgaataaatatc 135  Q
    ||||||||||||||||||||    ||| ||||||||||||||||||| ||||||    
T  1065 cgaatttgcattgtattgatcgatatattctatcaatttaaatgaatgaatatc 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 1521 - 1565
Alignment:
Q  25 ttttatgctattaacacgaatgttgtgagtttgtttgcaaattca 69  Q
    |||||||||||||||  | |||||||||||||||||||| |||||    
T  1521 ttttatgctattaacttggatgttgtgagtttgtttgcagattca 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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