View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17064_low_16 (Length: 257)

Name: NF17064_low_16
Description: NF17064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17064_low_16
NF17064_low_16
[»] chr5 (28 HSPs)
chr5 (1-238)||(28188607-28188860)
chr5 (17-60)||(11246546-11246589)
chr5 (17-59)||(38040267-38040309)
chr5 (17-60)||(25660912-25660955)
chr5 (17-60)||(35813294-35813337)
chr5 (18-63)||(41405141-41405186)
chr5 (17-50)||(42781646-42781679)
chr5 (17-60)||(6447532-6447576)
chr5 (20-60)||(17557030-17557070)
chr5 (17-65)||(36116929-36116977)
chr5 (21-60)||(3535992-3536031)
chr5 (17-55)||(9409002-9409041)
chr5 (17-60)||(20186866-20186909)
chr5 (17-60)||(22867044-22867087)
chr5 (17-60)||(36742019-36742062)
chr5 (17-60)||(40250229-40250272)
chr5 (18-60)||(28537135-28537177)
chr5 (2-60)||(31934912-31934970)
chr5 (17-61)||(1463869-1463914)
chr5 (17-58)||(29561645-29561686)
chr5 (17-60)||(6806692-6806736)
chr5 (17-60)||(9963415-9963459)
chr5 (21-57)||(17178278-17178314)
chr5 (16-60)||(31004181-31004225)
chr5 (21-57)||(31280602-31280638)
chr5 (17-57)||(31556821-31556861)
chr5 (17-49)||(31907662-31907694)
chr5 (17-49)||(38040144-38040176)
[»] chr4 (38 HSPs)
chr4 (18-61)||(56913-56956)
chr4 (1-54)||(42432014-42432067)
chr4 (15-59)||(17431378-17431422)
chr4 (17-61)||(20610738-20610782)
chr4 (1-60)||(36045830-36045889)
chr4 (17-60)||(49039497-49039540)
chr4 (17-60)||(4419738-4419781)
chr4 (20-55)||(12585614-12585649)
chr4 (17-60)||(12796666-12796709)
chr4 (17-60)||(20166316-20166359)
chr4 (17-60)||(38657540-38657583)
chr4 (17-60)||(41492550-41492593)
chr4 (13-63)||(25714501-25714551)
chr4 (15-60)||(53621200-53621245)
chr4 (17-61)||(1589209-1589253)
chr4 (17-57)||(14504685-14504725)
chr4 (17-60)||(36008274-36008318)
chr4 (20-60)||(44449522-44449562)
chr4 (17-60)||(48512198-48512242)
chr4 (16-60)||(53335308-53335352)
chr4 (17-59)||(9084759-9084802)
chr4 (21-60)||(15853822-15853861)
chr4 (17-60)||(27921896-27921939)
chr4 (17-60)||(43049985-43050028)
chr4 (17-60)||(49319393-49319436)
chr4 (17-60)||(54854231-54854274)
chr4 (17-51)||(37997898-37997932)
chr4 (16-57)||(8241424-8241465)
chr4 (16-60)||(30152127-30152172)
chr4 (17-62)||(42758215-42758260)
chr4 (17-61)||(56531288-56531333)
chr4 (17-60)||(2565260-2565304)
chr4 (17-60)||(12820457-12820501)
chr4 (20-60)||(20925093-20925132)
chr4 (17-60)||(28520783-28520827)
chr4 (18-50)||(30565364-30565396)
chr4 (20-60)||(39449400-39449440)
chr4 (17-60)||(53815695-53815739)
[»] chr1 (46 HSPs)
chr1 (17-60)||(18179328-18179371)
chr1 (17-60)||(9768861-9768904)
chr1 (17-60)||(18003816-18003859)
chr1 (15-59)||(28417328-28417372)
chr1 (17-57)||(47141858-47141898)
chr1 (15-59)||(47645846-47645890)
chr1 (15-54)||(2903077-2903116)
chr1 (17-60)||(42908771-42908814)
chr1 (17-60)||(43327010-43327053)
chr1 (17-60)||(52961134-52961177)
chr1 (18-60)||(1580829-1580871)
chr1 (17-59)||(4605894-4605936)
chr1 (1-59)||(9769616-9769674)
chr1 (18-60)||(9931087-9931129)
chr1 (15-60)||(5862128-5862173)
chr1 (11-60)||(9004346-9004395)
chr1 (17-61)||(1721139-1721183)
chr1 (20-60)||(7015742-7015782)
chr1 (17-60)||(9527425-9527469)
chr1 (17-57)||(18646691-18646731)
chr1 (17-53)||(50199528-50199564)
chr1 (17-56)||(3341788-3341827)
chr1 (17-60)||(7906378-7906421)
chr1 (1-60)||(9410364-9410422)
chr1 (17-60)||(37262157-37262200)
chr1 (1-60)||(42801879-42801938)
chr1 (17-60)||(43020611-43020654)
chr1 (17-60)||(46670896-46670939)
chr1 (17-67)||(5684115-5684165)
chr1 (17-59)||(33176155-33176197)
chr1 (17-58)||(47939250-47939292)
chr1 (20-61)||(3553336-3553377)
chr1 (20-49)||(3569055-3569084)
chr1 (17-61)||(13870133-13870178)
chr1 (17-61)||(195043-195087)
chr1 (20-60)||(3140358-3140398)
chr1 (17-49)||(13941330-13941362)
chr1 (17-60)||(29491469-29491513)
chr1 (20-60)||(33694542-33694582)
chr1 (17-60)||(39238715-39238759)
chr1 (17-60)||(40678822-40678866)
chr1 (17-60)||(47763437-47763481)
chr1 (20-60)||(49632293-49632333)
chr1 (18-50)||(50575911-50575943)
chr1 (16-60)||(51917553-51917597)
chr1 (17-60)||(52833158-52833202)
[»] chr7 (34 HSPs)
chr7 (1-61)||(1513486-1513546)
chr7 (18-60)||(17305443-17305485)
chr7 (17-57)||(35498401-35498441)
chr7 (17-60)||(8766863-8766906)
chr7 (17-56)||(24427367-24427406)
chr7 (21-60)||(38032911-38032950)
chr7 (17-60)||(43209401-43209444)
chr7 (17-60)||(43635588-43635631)
chr7 (1-60)||(45198134-45198193)
chr7 (18-60)||(8147239-8147281)
chr7 (17-59)||(32534637-32534679)
chr7 (21-59)||(43712369-43712407)
chr7 (18-60)||(44409201-44409243)
chr7 (15-60)||(7392356-7392401)
chr7 (17-54)||(23799306-23799343)
chr7 (20-60)||(3246541-3246581)
chr7 (24-60)||(14772394-14772430)
chr7 (24-60)||(15222846-15222882)
chr7 (17-60)||(21285405-21285449)
chr7 (17-57)||(35195846-35195886)
chr7 (14-53)||(2639626-2639665)
chr7 (17-60)||(7465466-7465509)
chr7 (17-60)||(32814827-32814870)
chr7 (17-60)||(37410533-37410576)
chr7 (17-55)||(10020521-10020559)
chr7 (16-50)||(19924777-19924811)
chr7 (17-61)||(20527481-20527526)
chr7 (17-46)||(32309200-32309229)
chr7 (17-61)||(38451861-38451906)
chr7 (20-61)||(41012636-41012677)
chr7 (17-60)||(14818417-14818461)
chr7 (17-60)||(15265415-15265459)
chr7 (17-60)||(31475892-31475936)
chr7 (17-60)||(41139086-41139130)
[»] chr6 (28 HSPs)
chr6 (17-57)||(20858435-20858475)
chr6 (21-60)||(9422833-9422872)
chr6 (17-60)||(22730754-22730797)
chr6 (17-60)||(34524875-34524918)
chr6 (17-59)||(4844144-4844186)
chr6 (18-59)||(8309165-8309206)
chr6 (17-60)||(9031766-9031809)
chr6 (17-59)||(30833018-30833060)
chr6 (18-55)||(17347260-17347297)
chr6 (2-55)||(30905488-30905541)
chr6 (17-60)||(2945595-2945639)
chr6 (20-60)||(31639141-31639181)
chr6 (9-57)||(32394028-32394076)
chr6 (17-60)||(8175996-8176039)
chr6 (17-60)||(10455742-10455785)
chr6 (17-60)||(17305516-17305559)
chr6 (17-60)||(30668236-30668279)
chr6 (15-57)||(1488091-1488133)
chr6 (17-55)||(17176154-17176192)
chr6 (17-51)||(17751389-17751423)
chr6 (18-60)||(19135929-19135971)
chr6 (17-50)||(8253642-8253675)
chr6 (15-60)||(33947383-33947428)
chr6 (17-60)||(9064865-9064909)
chr6 (15-59)||(14948834-14948878)
chr6 (15-59)||(14949070-14949114)
chr6 (17-60)||(14981754-14981798)
chr6 (20-60)||(31411116-31411156)
[»] scaffold0712 (1 HSPs)
scaffold0712 (17-60)||(4520-4563)
[»] scaffold0709 (1 HSPs)
scaffold0709 (17-60)||(4540-4583)
[»] scaffold0168 (1 HSPs)
scaffold0168 (17-60)||(34085-34128)
[»] chr8 (28 HSPs)
chr8 (17-60)||(7345428-7345471)
chr8 (15-60)||(216197-216242)
chr8 (15-60)||(220412-220457)
chr8 (15-60)||(689567-689612)
chr8 (15-60)||(692757-692802)
chr8 (15-60)||(696966-697011)
chr8 (15-60)||(729820-729865)
chr8 (15-60)||(734035-734080)
chr8 (15-60)||(853715-853760)
chr8 (15-60)||(857931-857976)
chr8 (17-61)||(14011090-14011134)
chr8 (17-61)||(26657855-26657899)
chr8 (11-59)||(37989087-37989135)
chr8 (17-60)||(18577113-18577156)
chr8 (17-60)||(39432380-39432423)
chr8 (17-59)||(16808413-16808455)
chr8 (17-60)||(2696532-2696576)
chr8 (1-60)||(10292351-10292411)
chr8 (17-60)||(38790625-38790669)
chr8 (17-60)||(4955035-4955078)
chr8 (17-60)||(29937210-29937253)
chr8 (2-60)||(12986472-12986530)
chr8 (17-47)||(22847314-22847344)
chr8 (17-60)||(2800018-2800062)
chr8 (17-60)||(14012611-14012655)
chr8 (17-61)||(17467277-17467321)
chr8 (17-60)||(21133571-21133615)
chr8 (2-50)||(36593204-36593252)
[»] chr3 (36 HSPs)
chr3 (17-60)||(16874242-16874285)
chr3 (17-60)||(24130559-24130602)
chr3 (18-67)||(12143460-12143509)
chr3 (19-60)||(30745785-30745826)
chr3 (20-60)||(3461779-3461819)
chr3 (17-61)||(4010070-4010114)
chr3 (17-61)||(31108812-31108856)
chr3 (17-60)||(3973302-3973345)
chr3 (17-60)||(3996531-3996574)
chr3 (17-60)||(6951842-6951885)
chr3 (17-60)||(19137619-19137662)
chr3 (20-59)||(23305747-23305786)
chr3 (17-60)||(24160580-24160623)
chr3 (20-58)||(33533205-33533243)
chr3 (17-59)||(51017791-51017833)
chr3 (19-60)||(40160735-40160776)
chr3 (17-61)||(3993759-3993803)
chr3 (17-49)||(51412042-51412074)
chr3 (17-60)||(12236599-12236642)
chr3 (17-60)||(28951866-28951909)
chr3 (21-60)||(38507648-38507687)
chr3 (17-51)||(34407142-34407176)
chr3 (18-60)||(41430834-41430876)
chr3 (20-57)||(23237365-23237402)
chr3 (20-57)||(24890076-24890113)
chr3 (17-49)||(4045686-4045718)
chr3 (28-60)||(6284877-6284909)
chr3 (17-60)||(9624982-9625026)
chr3 (17-60)||(14868684-14868728)
chr3 (20-56)||(16999932-16999968)
chr3 (15-43)||(27119293-27119321)
chr3 (17-60)||(27183733-27183777)
chr3 (17-60)||(43774184-43774228)
chr3 (21-53)||(46969005-46969037)
chr3 (17-60)||(47191372-47191416)
chr3 (17-60)||(52030120-52030164)
[»] chr2 (29 HSPs)
chr2 (1-60)||(38807881-38807940)
chr2 (1-60)||(22355083-22355142)
chr2 (1-60)||(25463302-25463361)
chr2 (17-60)||(34376542-34376585)
chr2 (21-60)||(39334937-39334976)
chr2 (15-57)||(19064942-19064984)
chr2 (15-60)||(19352866-19352911)
chr2 (1-61)||(18065253-18065313)
chr2 (20-60)||(36277757-36277797)
chr2 (2-54)||(40471159-40471211)
chr2 (17-60)||(2057481-2057524)
chr2 (17-60)||(5772860-5772903)
chr2 (17-60)||(14307746-14307789)
chr2 (1-60)||(34107274-34107333)
chr2 (17-60)||(39118393-39118436)
chr2 (15-50)||(44132613-44132648)
chr2 (18-60)||(218108-218150)
chr2 (15-49)||(26975348-26975382)
chr2 (17-59)||(36386165-36386207)
chr2 (17-57)||(3037674-3037715)
chr2 (20-57)||(6496442-6496479)
chr2 (15-60)||(41288089-41288134)
chr2 (1-54)||(42211526-42211579)
chr2 (1-61)||(11001769-11001829)
chr2 (17-60)||(11133075-11133119)
chr2 (17-45)||(13294436-13294464)
chr2 (17-60)||(29664602-29664646)
chr2 (1-49)||(29713125-29713173)
chr2 (20-60)||(32677335-32677375)
[»] scaffold1808 (1 HSPs)
scaffold1808 (15-60)||(883-928)
[»] scaffold1343 (1 HSPs)
scaffold1343 (17-57)||(929-969)
[»] scaffold0126 (1 HSPs)
scaffold0126 (17-60)||(25013-25056)
[»] scaffold0070 (1 HSPs)
scaffold0070 (17-61)||(12563-12608)
[»] scaffold0809 (1 HSPs)
scaffold0809 (17-60)||(4857-4901)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-60)||(25025-25069)


Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 28188607 - 28188860
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcacatggattaattgtttgttcttgtaatgtgttagaaactag 100  Q
    |||||||||||||||||| ||||||||||||||| | ||| |||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  28188607 gttcgaatctcaatctctacatataacaatgcatattcctaccaactgaattatgttcacatggaatagttgtttgttcttgtaatgtgttagaaactag 28188706  T
Q  101 tttatcattcatatgaaaat--------------ctttgatattattttttgtaagggactaattggccacaattattt--acatgaaaatgttaaagaa 184  Q
    ||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  28188707 tttatcattcatatgaaaatgttaaagaagtaatctttgatattattttttgtaagggactaattggccacaattttttttacatgaaaatgttaaagaa 28188806  T
Q  185 gtaatcataaacaagacatttgtacatatatacttgcaattcttatagagatca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  28188807 gtaatcataaacaagacatttgtacatatatacttgcaattctgacagagatca 28188860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 11246546 - 11246589
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  11246546 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 11246589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 38040309 - 38040267
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  38040309 ctgcatataacaatgcatgtccctgccaactgagctatgctca 38040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 25660955 - 25660912
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  25660955 ctgcatataacaatgcatatccctgccaactgagctatgctcac 25660912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 35813294 - 35813337
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  35813294 ctgcatataacaatgcatgtccctgtcaactgagctatgctcac 35813337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 41405141 - 41405186
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcacatg 63  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||    
T  41405141 tgcatataacaatgcatgtccctgtcaactgaactatgctcacatg 41405186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 42781646 - 42781679
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgag 50  Q
    ||||||||||||||||||||||||||||||||||    
T  42781646 ctgcatataacaatgcatgtccctgccaactgag 42781679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 6447532 - 6447576
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  6447532 ctgcatataataatgcattgtccctgccaactgagttatgctcac 6447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 17557070 - 17557030
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  17557070 catataacaatgcatgtctctgccaactgagttaggctcac 17557030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 36116929 - 36116977
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcacatgga 65  Q
    ||||||||| |||| |||||||||||||| |||||||||||||| ||||    
T  36116929 ctgcatatagcaatacatgtccctgccaattgagttatgctcacttgga 36116977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 3535992 - 3536031
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  3535992 atataacaatgcatgtccctgccaactgaactatgctcac 3536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 9409002 - 9409041
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatg 55  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  9409002 ctgcatataacaatgcattgtccctgccaactgagttatg 9409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 20186909 - 20186866
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||||||||||||||||||||  ||||||||    
T  20186909 ctgcatataataatgcatgtccctgccaactgagcaatgctcac 20186866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 22867044 - 22867087
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||| || ||||||||||||||||||    
T  22867044 ctgcatataataatgcatgtccttgtcaactgagttatgctcac 22867087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 36742019 - 36742062
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| |||||| |||||||||||| |||||||||    
T  36742019 ctgcatataacaattcatgtctctgccaactgagctatgctcac 36742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 40250229 - 40250272
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  40250229 ctgcatataacaatgcatgttactgccaactgagctatgctcac 40250272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28537177 - 28537135
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  28537177 tgcatataacaatgcatgtccatgtcaattgagttatgctcac 28537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 31934912 - 31934970
Alignment:
Q  2 ttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||| |||||||||||||||||| |||||||   ||| |||||||||||||| ||||    
T  31934912 ttcgaacctcaatctctgcatataataatgcattgtcctaccaactgagttatgttcac 31934970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 1463914 - 1463869
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcaca 61  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  1463914 ctgcatataataatgcattgtccctgccaactgagctatgctcaca 1463869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 29561686 - 29561645
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctc 58  Q
    |||||||||||||||||||||||||| || |||| |||||||    
T  29561686 ctgcatataacaatgcatgtccctgcgaaatgagctatgctc 29561645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 6806692 - 6806736
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||    
T  6806692 ctgcatataacaatgcattgtctctgccaactgagctatgctcac 6806736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 9963459 - 9963415
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||    
T  9963459 ctgcatataacaatgcattgtccctgccaactgagctatactcac 9963415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 17178278 - 17178314
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  17178278 atataacaatgcatgtccctgtcaactgagctatgct 17178314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 31004181 - 31004225
Alignment:
Q  16 tctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||| |||||||||| |||||||| |||| ||||||||||||||    
T  31004181 tctgcctataacaatgtatgtccctaccaattgagttatgctcac 31004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 31280602 - 31280638
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  31280602 atataataatgcatgtccctgccaactgagctatgct 31280638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 31556861 - 31556821
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||||||||||||||||||| || |||| ||||||    
T  31556861 ctgcatataacaatgcatgtccctgctaagtgagctatgct 31556821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 31907694 - 31907662
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactga 49  Q
    |||||||||||||||||||||||||| ||||||    
T  31907694 ctgcatataacaatgcatgtccctgcaaactga 31907662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 38040144 - 38040176
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactga 49  Q
    |||||||||||||||||||||| ||||||||||    
T  38040144 ctgcatataacaatgcatgtccttgccaactga 38040176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 56913 - 56956
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  56913 tgcatataacaatgcatgtccctgccaactgagttatgctcaca 56956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42432067 - 42432014
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttat 54  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  42432067 gttcgaaccccaatccctgcatataacaatgcatgtccctgccaactgagttat 42432014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 17431422 - 17431378
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  17431422 ctctgcatataacaatgcatgtccctgtcaactgagttatgctca 17431378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 20610782 - 20610738
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  20610782 ctgcatataacaatgcatgtccctgccaactgagctatgctcaca 20610738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 36045889 - 36045830
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||| |||| |||||||||    
T  36045889 gttcgaatctcaacccctgcatataacaatgcatgtccctgtcaattgagctatgctcac 36045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 49039497 - 49039540
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  49039497 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 49039540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 4419738 - 4419781
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  4419738 ctgcatataacaatgcatgtctctgacaactgagttatgctcac 4419781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 12585614 - 12585649
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatg 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  12585614 catataacaatgcatgtccctgccaactgagttatg 12585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 12796709 - 12796666
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| |||| |||||||||||||||||||||||    
T  12796709 ctgcatataacaatgtatgttcctgccaactgagttatgctcac 12796666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 20166359 - 20166316
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  20166359 ctgcatataacaatgcatgtccctgccaactgagctacgctcac 20166316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 38657583 - 38657540
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  38657583 ctgcatataacaatgcatgtccctgccaactgagccatgctcac 38657540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 41492550 - 41492593
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  41492550 ctgcatataataatgcatgtccctgccaactgagctatgctcac 41492593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 25714501 - 25714551
Alignment:
Q  13 atctctgcatataacaatgcatgtccctgccaactgagttatgctcacatg 63  Q
    |||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  25714501 atctctgcatataacaatgcatattcctgccaactaagttatactcacatg 25714551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 53621245 - 53621200
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  53621245 ctctgtatataacaatgcatgtccctgtcaactgaattatgctcac 53621200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 1589209 - 1589253
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||    
T  1589209 ctgcatataacaatgcatgtcaccgccaactgagctatgctcaca 1589253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 14504685 - 14504725
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  14504685 ctgcatataacaatgcatgttcttgccaactgagttatgct 14504725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 36008318 - 36008274
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  36008318 ctgcatataacaatgcattgtccctgccaactgagctatgctcac 36008274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 44449522 - 44449562
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  44449522 catataacaatgcatgttcctgctaactgagttatgctcac 44449562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 48512242 - 48512198
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  48512242 ctgcatataacaatgcattgtccctgccaactgagctatgctcac 48512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 53335352 - 53335308
Alignment:
Q  16 tctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||    
T  53335352 tctgcatataacgatgcatgtcgctgccaactgaattatgctcac 53335308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 9084802 - 9084759
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  9084802 ctgcatataacaatgcattgtccctgccaactgagctatgctca 9084759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 15853861 - 15853822
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  15853861 atataacaatgcatgttcctgccaactgaattatgctcac 15853822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 27921939 - 27921896
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||    
T  27921939 ctgcatataataatgcatgtccctaccaactgagctatgctcac 27921896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 43049985 - 43050028
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||| |||| |||||||| |||||||||    
T  43049985 ctgcatataacaatgcatgttcctgtcaactgagctatgctcac 43050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 49319436 - 49319393
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||    
T  49319436 ctgcatataataatgcatgtccatgccaactgagctatgctcac 49319393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 54854231 - 54854274
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||  |||||||||||||||||||||| |||||||||    
T  54854231 ctgcatataattatgcatgtccctgccaactgagctatgctcac 54854274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 37997898 - 37997932
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagt 51  Q
    ||||||||||||||| |||||||||||||||||||    
T  37997898 ctgcatataacaatgaatgtccctgccaactgagt 37997932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 8241424 - 8241465
Alignment:
Q  16 tctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||| ||||||||| |||| |||||||||||||||    
T  8241424 tctgcatataataatgcatgttcctgacaactgagttatgct 8241465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 30152172 - 30152127
Alignment:
Q  16 tctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||    
T  30152172 tctgcatataacaatgcattgttcctgccaactgagctatgctcac 30152127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 42758215 - 42758260
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcacat 62  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||    
T  42758215 ctgcatataataatgcatgtccctacaaactgagctatgctcacat 42758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 56531288 - 56531333
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||    
T  56531288 ctgcatataacaatgcattgtccttgccaactgagctatgctcaca 56531333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 2565304 - 2565260
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||    
T  2565304 ctgcatataacaatgcattgtccctgtcaactgagctatgctcac 2565260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 12820457 - 12820501
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||    
T  12820457 ctgcatataacaatgcattgtctctgccaactgagctatgctcac 12820501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 20925132 - 20925093
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  20925132 catataacaatccatgtccctg-caactgagttatgctcac 20925093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 28520783 - 28520827
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  28520783 ctgcatataataatgcattgtccctgccaactgagctatgctcac 28520827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 30565396 - 30565364
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgag 50  Q
    ||||||||||||| |||||||||||||||||||    
T  30565396 tgcatataacaatacatgtccctgccaactgag 30565364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 39449440 - 39449400
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||||||||||||||| |||||||||| ||||    
T  39449440 catataataatgcatgtccctgccagctgagttatgttcac 39449400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 53815739 - 53815695
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  53815739 ctgcatataataatgcattgtccctgccaactgagctatgctcac 53815695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 18179371 - 18179328
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  18179371 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 18179328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 9768861 - 9768904
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  9768861 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 9768904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 18003859 - 18003816
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  18003859 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 18003816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 28417328 - 28417372
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  28417328 ctctgcatataagaatgcatgtctctgccaactgagttatgctca 28417372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 47141858 - 47141898
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  47141858 ctgcatataacaatgcatgtccctgtcaactgagttatgct 47141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 47645846 - 47645890
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||    
T  47645846 ctctgcatataacaatgcatgtctctgccaactgagctatgctca 47645890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 2903077 - 2903116
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttat 54  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  2903077 ctctgcatataacaatgcatgtccctggcaactgagttat 2903116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 42908814 - 42908771
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  42908814 ctgcatataacaatgcatgtccctgccaactgagctaagctcac 42908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 43327053 - 43327010
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  43327053 ctgcatataacaatacatgtccctgcaaactgagttatgctcac 43327010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 52961134 - 52961177
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  52961134 ctgcatataacaatgcatgtccttgccaactgagctatgctcac 52961177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 1580871 - 1580829
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  1580871 tgcatataacattgtatgtccctgccaactgagttatgctcac 1580829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 4605894 - 4605936
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  4605894 ctgcatataacaatgcatgtctctgtcaactgagttatgctca 4605936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9769616 - 9769674
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||| | ||||| || ||||||| ||||||||||||||||||||||| ||||||||    
T  9769616 gttcgaaccccaatccctacatataataatgcatgtccctgccaactgagctatgctca 9769674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 9931129 - 9931087
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  9931129 tgcatataataatgcatgtccctgctaactgagttatgctcac 9931087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 5862173 - 5862128
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  5862173 ctctacatataacaatgcatgtccctgccaactgagctatgttcac 5862128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 9004395 - 9004346
Alignment:
Q  11 caatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||| ||||||||||||||  |||||||||||||||||| |||||||||    
T  9004395 caatccctgcatataacaatatatgtccctgccaactgagctatgctcac 9004346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 1721183 - 1721139
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||    
T  1721183 ctgcatataacaatgcatgttcctaccaactgagctatgctcaca 1721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 7015742 - 7015782
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  7015742 catataacaatgcatgtcccagccaactgagctatgctcac 7015782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 9527469 - 9527425
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  9527469 ctgcatataacaatgcattgtccctgccaactgagctatgctcac 9527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 18646731 - 18646691
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  18646731 ctgcatatcacaatgcatgtccatgccaactgagttatgct 18646691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 50199528 - 50199564
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagtta 53  Q
    |||||||||||||||||||||||| ||||||||||||    
T  50199528 ctgcatataacaatgcatgtccctaccaactgagtta 50199564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 3341788 - 3341827
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgc 56  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  3341788 ctgcatataataatgcatgtccctgccaactgagctatgc 3341827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 7906378 - 7906421
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||| ||||||||  |||||||||    
T  7906378 ctgcatataacaatgcatgtccctaccaactgaactatgctcac 7906421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 9410364 - 9410422
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||| | ||||||||||| |||||||||| ||||||||||  |||||||||    
T  9410364 gttcgaatctcaacc-ctgcatataactatgcatgtccttgccaactgaactatgctcac 9410422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 37262157 - 37262200
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||| |||||||||||||||||||  |||||||||    
T  37262157 ctgcatataacaacgcatgtccctgccaactgaactatgctcac 37262200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 42801938 - 42801879
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| | ||| ||||||||||||||||||||||| ||| |||||||| |||| ||||    
T  42801938 gttcgaaccccaacctctgcatataacaatgcatgtctctgtcaactgagctatgttcac 42801879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 43020654 - 43020611
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||    
T  43020654 ctgcatataataatgcatgtccctgccaaccgagctatgctcac 43020611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 46670896 - 46670939
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||    
T  46670896 ctgcatataacaatgcatgtcactgctaactgaattatgctcac 46670939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 5684165 - 5684115
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcacatggatt 67  Q
    |||||||||| |||||||||| |||||||||||| |||||| ||| |||||    
T  5684165 ctgcatataataatgcatgtctctgccaactgagctatgcttacagggatt 5684115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 33176155 - 33176197
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  33176155 ctgcatataacaatgcatatccctaccaactgagctatgctca 33176197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 47939250 - 47939292
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctc 58  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  47939250 ctgcatataacaatgcattgtccctgccaactgagctatgctc 47939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 3553336 - 3553377
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||| |||||||||||||||||||  |||||||||||||    
T  3553336 catataataatgcatgtccctgccaaccaagttatgctcaca 3553377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 3569084 - 3569055
Alignment:
Q  20 catataacaatgcatgtccctgccaactga 49  Q
    ||||||||||||||||||||||||||||||    
T  3569084 catataacaatgcatgtccctgccaactga 3569055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 13870133 - 13870178
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcaca 61  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  13870133 ctgcatataataatgcattgtccctgccaactgagctatgctcaca 13870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 195087 - 195043
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||  |||||||||||||||||||||| || |||||||    
T  195087 ctgcatataattatgcatgtccctgccaactgagctacgctcaca 195043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 3140398 - 3140358
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  3140398 catataacaatgcatgtctctgtcaactgagttatactcac 3140358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 13941362 - 13941330
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactga 49  Q
    |||||||||||||||||||||| ||||||||||    
T  13941362 ctgcatataacaatgcatgtccttgccaactga 13941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 29491513 - 29491469
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  29491513 ctgcatataataatgcattgtccctgccaactgagctatgctcac 29491469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 33694582 - 33694542
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||||| |||||||||||| ||||||||||||    
T  33694582 catataataatgcatatccctgccaactaagttatgctcac 33694542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 39238759 - 39238715
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  39238759 ctgcatataataatgcattgtccctgccaactgagctatgctcac 39238715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 40678866 - 40678822
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  40678866 ctgcatataataatgcattgtccctgccaactgagctatgctcac 40678822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 47763437 - 47763481
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  47763437 ctgcatataataatgcattgtccctgccaactgagctatgctcac 47763481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 49632333 - 49632293
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||| |||| || ||||||    
T  49632333 catataacaatgcatgtccctgccaattgagctacgctcac 49632293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 50575943 - 50575911
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgag 50  Q
    ||||||||||||||||||||||| |||||||||    
T  50575943 tgcatataacaatgcatgtcccttccaactgag 50575911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 51917553 - 51917597
Alignment:
Q  16 tctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||| ||||||||||  ||||||||||| |||||||||    
T  51917553 tctgcatataataatgcatgtctatgccaactgagctatgctcac 51917597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 52833158 - 52833202
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  52833158 ctgcatataataatgcattgtccctgccaactgagttaggctcac 52833202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1513546 - 1513486
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||| ||||| | || |||||||||||||||||||||||||||||| |||||||||||    
T  1513546 gttcgaacctcaacccctacatataacaatgcatgtccctgccaactgatttatgctcaca 1513486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 17305443 - 17305485
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  17305443 tgcatataacaatgcatgtccctgccaactgagctatgctcac 17305485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 35498441 - 35498401
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  35498441 ctgcatataataatgcatgtccctgccaactgagttatgct 35498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 8766863 - 8766906
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  8766863 ctgcatatgacaatgaatgtccctgccaactgagttatgctcac 8766906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 24427406 - 24427367
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgc 56  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  24427406 ctgcatataacaatgcatgtctctgccaactgagttatgc 24427367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 38032911 - 38032950
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  38032911 atataacaatgcatgtccctgccaactgagttatgttcac 38032950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 43209444 - 43209401
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  43209444 ctgcatataacaatgcatgttcctgccaactgagttatgttcac 43209401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 43635631 - 43635588
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  43635631 ctgcatataacaatgcatgtttctgccaactgagttatgctcac 43635588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45198134 - 45198193
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| |||||||||| |||||||   ||| |||||||||||||||||||    
T  45198134 gttcgaatctcaatcactgcatataataatgcattatcctaccaactgagttatgctcac 45198193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 8147239 - 8147281
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  8147239 tgcatataacaatgcatgtccctgccaattgagctatgctcac 8147281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 32534637 - 32534679
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  32534637 ctgcatataaccatgtatgtccctgccaactgagttatgctca 32534679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 43712369 - 43712407
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  43712369 atataacaatgcatgtccctaccaactgagttatgctca 43712407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 44409243 - 44409201
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  44409243 tgcatataataatgcatgtccctgctaactgagttatgctcac 44409201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 7392356 - 7392401
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| |||||||| |||| |||||||||    
T  7392356 ctctgcatataacaatgcatgttcctgccaattgagctatgctcac 7392401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 23799343 - 23799306
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttat 54  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  23799343 ctgcatataacaatgcatgtctctgccaactgagttat 23799306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 3246541 - 3246581
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  3246541 catataacaatgcatgtccctgtcaactgagctatgctcac 3246581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 14772394 - 14772430
Alignment:
Q  24 taacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||||    
T  14772394 taacaatgcatgtctctgccaactgagttatgctcac 14772430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 15222846 - 15222882
Alignment:
Q  24 taacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||||    
T  15222846 taacaatgcatgtctctgccaactgagttatgctcac 15222882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 21285405 - 21285449
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  21285405 ctgcatataacaatgcattgtccctgccaactgagctatgctcac 21285449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 35195886 - 35195846
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  35195886 ctgcatataataatgcatgtccctgccaactgagctatgct 35195846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 2639665 - 2639626
Alignment:
Q  14 tctctgcatataacaatgcatgtccctgccaactgagtta 53  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  2639665 tctctgcatataacaatgcatgtccttgcaaactgagtta 2639626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 7465509 - 7465466
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||||||| |||||||||||| |||||||||    
T  7465509 ctgcatataataatgcatgtctctgccaactgagctatgctcac 7465466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 32814870 - 32814827
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||    
T  32814870 ctgcatataataatgcatgtccctaccaactgagctatgctcac 32814827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 37410533 - 37410576
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| | ||||||||| |||||||||    
T  37410533 ctgcatataacaatgcatgtccttaccaactgagctatgctcac 37410576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 10020521 - 10020559
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatg 55  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  10020521 ctgcatataacaatgcatgtccctgtcaactgagctatg 10020559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 19924811 - 19924777
Alignment:
Q  16 tctgcatataacaatgcatgtccctgccaactgag 50  Q
    ||||||||||| |||||||||||||||||||||||    
T  19924811 tctgcatataataatgcatgtccctgccaactgag 19924777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 20527481 - 20527526
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||    
T  20527481 ctgcatataacaatgcattgtccctgccaactgagctatactcaca 20527526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 46
Target Start/End: Original strand, 32309200 - 32309229
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaac 46  Q
    ||||||||||||||||||||||||||||||    
T  32309200 ctgcatataacaatgcatgtccctgccaac 32309229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 38451906 - 38451861
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  38451906 ctgcatataacaatgcattgtccctgtcaactgagctatgctcaca 38451861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 41012636 - 41012677
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||||||||||||| |||| |||| ||||||||||    
T  41012636 catataacaatgcatgtccctaccaattgagctatgctcaca 41012677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 14818417 - 14818461
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  14818417 ctgcatataataatgcactgtccctgccaactgagctatgctcac 14818461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 15265415 - 15265459
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  15265415 ctgcatataataatgcactgtccctgccaactgagctatgctcac 15265459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 31475892 - 31475936
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  31475892 ctgcatataataatgcaatgtccctgccaactgagctatgctcac 31475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 41139130 - 41139086
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  41139130 ctgcatataataatgcattgtccctgccaactgagctatgctcac 41139086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 20858435 - 20858475
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20858435 ctgcatataacaatgcatgtccctgccaactgagttatgct 20858475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 9422872 - 9422833
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9422872 atataacaatgcatgtccctgccaactgagttatgctcac 9422833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 22730754 - 22730797
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  22730754 ctgcatataacaatgcatgtctctgccaactgagttatgctcac 22730797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 34524918 - 34524875
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  34524918 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 34524875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 4844186 - 4844144
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  4844186 ctgcatataacaatgcatgtccctgccaactgagttatactca 4844144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 8309206 - 8309165
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  8309206 tgcatataacaatgcatgtccctgccaactgagctatgctca 8309165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 9031809 - 9031766
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  9031809 ctgcatataacaatgcatgtccctgccaactgagctatgttcac 9031766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 30833060 - 30833018
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  30833060 ctgcatataacaatgcatgtccctgccaactgaactatgctca 30833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 17347297 - 17347260
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatg 55  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17347297 tgcatataacaatgcatatccctgccaactgagttatg 17347260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 30905541 - 30905488
Alignment:
Q  2 ttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatg 55  Q
    |||||| ||||||| || ||||||||||||||||| ||| ||||||||||||||    
T  30905541 ttcgaacctcaatccctacatataacaatgcatgttcctaccaactgagttatg 30905488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 2945639 - 2945595
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  2945639 ctgcatataacaatgcattgtccctgccaactgagctatgctcac 2945595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 31639181 - 31639141
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  31639181 catataacaatgcgtgtccctgtcaactgagttatgctcac 31639141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 32394076 - 32394028
Alignment:
Q  9 ctcaatctctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||||||||    
T  32394076 ctcaacctctgcataagacaatacatgtccctgccaactgagttatgct 32394028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 8176039 - 8175996
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||    
T  8176039 ctgcatataacaatgcatgtctctgtcaactgagctatgctcac 8175996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 10455785 - 10455742
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||| ||||||||||||  |||||||||    
T  10455785 ctgcatataacaatgcatgttcctgccaactgaactatgctcac 10455742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 17305559 - 17305516
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||    
T  17305559 ctgcatataataatgcatgtccctaccaactgagttatgttcac 17305516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 30668236 - 30668279
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||  |||||||||||||||||||||    
T  30668236 ctgcatataataatgcatgtctatgccaactgagttatgctcac 30668279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 1488133 - 1488091
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||    
T  1488133 ctctgcatataacaatgcatgtctctgccaattgagatatgct 1488091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 17176192 - 17176154
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatg 55  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  17176192 ctgcatataacaatgcatgtccctgtcaactgagctatg 17176154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 17751389 - 17751423
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagt 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  17751389 ctgcatataacaatgcatgtccatgccaactgagt 17751423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 19135971 - 19135929
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||    
T  19135971 tgcatataataatgcatgtccctgccaaccgagctatgctcac 19135929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 8253642 - 8253675
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgag 50  Q
    |||||||||||||||||||||| |||||||||||    
T  8253642 ctgcatataacaatgcatgtccatgccaactgag 8253675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 33947428 - 33947383
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||| ||||||||||||||| | ||||||||| |||||||||    
T  33947428 ctctgcatgtaacaatgcatgtccataccaactgagatatgctcac 33947383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 9064909 - 9064865
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  9064909 ctgcatataataatgcattgtccctgccaactgagctatgctcac 9064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 14948834 - 14948878
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||| |||| ||||||||| |||||||| ||||||||    
T  14948834 ctctgcatataataatgtatgtccctgtcaactgagctatgctca 14948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 14949070 - 14949114
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||| |||| ||||  |||||||||||||||||||||    
T  14949070 ctctgcatataataatgtatgtttctgccaactgagttatgctca 14949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 14981754 - 14981798
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  14981754 ctgcatataataatgcattgtccctgccaactgagctatgctcac 14981798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 31411116 - 31411156
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||||||| |||| ||||||||||||||||||    
T  31411116 catataataatgcatgttcctgtcaactgagttatgctcac 31411156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 4563 - 4520
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  4563 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 4520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 4583 - 4540
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  4583 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 4540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 34085 - 34128
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  34085 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 34128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 7345471 - 7345428
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  7345471 ctgcatataataatgcatgtccctgccaactgagttatgctcac 7345428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 216197 - 216242
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  216197 ctctgcatataacaatgtatgtccctgccaactgagctatgctcac 216242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 220412 - 220457
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  220412 ctctgcatataacattgcatgtccctgccaactgagctatgctcac 220457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 689567 - 689612
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  689567 ctctgcatataacattgcatgtccctgccaactgagctatgctcac 689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 692757 - 692802
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  692757 ctctgcatataacaatgtatgtccctgccaactgagctatgctcac 692802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 696966 - 697011
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  696966 ctctgcatataacaatgtatgtccctgccaactgagctatgctcac 697011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 729820 - 729865
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  729820 ctctgcatataacaatgtatgtccctgccaactgagctatgctcac 729865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 734035 - 734080
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  734035 ctctgcatataacattgcatgtccctgccaactgagctatgctcac 734080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 853715 - 853760
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  853715 ctctgcatataacaatgtatgtccctgccaactgagctatgctcac 853760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 857931 - 857976
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  857931 ctctgcatataacattgcatgtccctgccaactgagctatgctcac 857976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 14011090 - 14011134
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  14011090 ctgcatataacaatgcatgtccctgccaactgaactatgctcaca 14011134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 26657899 - 26657855
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  26657899 ctgcatataacaatgcatgtccctaccaactgagctatgctcaca 26657855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 37989087 - 37989135
Alignment:
Q  11 caatctctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  37989087 caatctctgcctataacaatgcatgtccctgttaactgagttatgctca 37989135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 18577156 - 18577113
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  18577156 ctgcatataacaatacatgtccctgtcaactgagttatgctcac 18577113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 39432380 - 39432423
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  39432380 ctgcatataacattgcatgtccctgccaactgagctatgctcac 39432423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 16808413 - 16808455
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||| ||||||||||||||| ||||||||||||||||    
T  16808413 ctgcatataataatgcatgtccctgctaactgagttatgctca 16808455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 2696576 - 2696532
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  2696576 ctgcatataataatgcattgtccctgccaactgagttatgctcac 2696532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10292411 - 10292351
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    ||||||||||||  | |||||||||| ||||||| |||||||||||||||| |||||||||    
T  10292411 gttcgaatctcagcccctgcatataataatgcattgtccctgccaactgagctatgctcac 10292351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 38790625 - 38790669
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||    
T  38790625 ctgcatataataatgcattgtccctgccaactgagttatgctcac 38790669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 4955035 - 4955078
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||    
T  4955035 ctgcatataacaatacatgtctctgccaattgagttatgctcac 4955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 29937253 - 29937210
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  29937253 ctgcatataacaatacatgtccctaccaactgagctatgctcac 29937210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 12986530 - 12986472
Alignment:
Q  2 ttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||| ||| |||| |||||||||| |||| | ||||||||||||| |||||||||    
T  12986530 ttcgaatcacaacctctacatataacaacgcatttacctgccaactgagatatgctcac 12986472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Original strand, 22847314 - 22847344
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaact 47  Q
    |||||||||||||||||||||||||||||||    
T  22847314 ctgcatataacaatgcatgtccctgccaact 22847344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 2800062 - 2800018
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  2800062 ctgcatataataatgcattgtccctgccaactgagctatgctcac 2800018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 14012655 - 14012611
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||  |||||||||    
T  14012655 ctgcatataacaatgcattgtccctgccaactgaactatgctcac 14012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 17467321 - 17467277
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||| |||| || ||||| ||||||||||||||||||||    
T  17467321 ctgcatataataatgtatatccctaccaactgagttatgctcaca 17467277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 21133571 - 21133615
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| || |||||||||||||||||||||||    
T  21133571 ctgcatataataatgcattgttcctgccaactgagttatgctcac 21133615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 36593252 - 36593204
Alignment:
Q  2 ttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgag 50  Q
    |||||| | ||| ||||| |||||||||||||||||||| |||||||||    
T  36593252 ttcgaaccccaacctctgtatataacaatgcatgtccctaccaactgag 36593204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 16874242 - 16874285
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  16874242 ctgcatataacaatgcatgtccctgccaactgagctatgctcac 16874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 24130602 - 24130559
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24130602 ctgcatataacaatgtatgtccctgccaactgagttatgctcac 24130559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 12143460 - 12143509
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcacatggatt 67  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  12143460 tgcatataacaatgcatgtccctgccaactgagctatgttcacaaggatt 12143509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 30745785 - 30745826
Alignment:
Q  19 gcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  30745785 gcatataacaatgcatgtccctgccaactgagctatgctcac 30745826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 3461779 - 3461819
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  3461779 catataacaatgcatgtccctgtcaactgagttatgctcac 3461819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 4010070 - 4010114
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||    
T  4010070 ctgcatataacaatgcatgtccctaccaactgagctatgctcaca 4010114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 31108812 - 31108856
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  31108812 ctgcatataattatgcatgtccctgccaactgagttatgctcaca 31108856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 3973345 - 3973302
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  3973345 ctgcatataacaatgcatgtccctaccaactgagctatgctcac 3973302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 3996531 - 3996574
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  3996531 ctgcatataacaatgcatgtccctaccaactgagctatgctcac 3996574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 6951842 - 6951885
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  6951842 ctgcatataataatgcatgtccctgtcaactgagttatgctcac 6951885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 19137662 - 19137619
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  19137662 ctgcatataacaatgcatgttcctgccaactgagctatgctcac 19137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 23305786 - 23305747
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctca 59  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  23305786 catataacaatgcatgtccctaccaactgagttatgctca 23305747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 24160580 - 24160623
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  24160580 ctgcatataacagtgcatgtctctgccaactgagttatgctcac 24160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 33533243 - 33533205
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctc 58  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33533243 catataacaatgcatgtctctgccaactgagttatgctc 33533205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 51017833 - 51017791
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||||||||||||||||||| ||| ||||    
T  51017833 ctgcatataacaatgcatgtccctgccaactgagctatactca 51017791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 40160776 - 40160735
Alignment:
Q  19 gcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  40160776 gcatataacaatgcatgtccctgccaattgagctatgctcac 40160735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 3993759 - 3993803
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||    
T  3993759 ctgcatataacaatgcatgtccctctcaactgagctatgctcaca 3993803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 51412042 - 51412074
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactga 49  Q
    |||||||||||||||||||||||||||||||||    
T  51412042 ctgcatataacaatgcatgtccctgccaactga 51412074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 12236642 - 12236599
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||||||||||||||||||| || ||||||    
T  12236642 ctgcatataataatgcatgtccctgccaactgagctacgctcac 12236599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 28951909 - 28951866
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||| |||||||||  ||||||||||||||||||||||    
T  28951909 ctgcatataataatgcatgtatctgccaactgagttatgctcac 28951866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 38507687 - 38507648
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||| ||||||||||||||||||||||| |||||||||    
T  38507687 atataataatgcatgtccctgccaactgagctatgctcac 38507648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 34407142 - 34407176
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagt 51  Q
    |||||||||| ||||||||||||||||||||||||    
T  34407142 ctgcatataataatgcatgtccctgccaactgagt 34407176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 41430834 - 41430876
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||| ||||||| ||||| |||||||||||||||||||    
T  41430834 tgcatataataatgcatatccctaccaactgagttatgctcac 41430876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 23237402 - 23237365
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  23237402 catataataatgcatgtccctgccaactgagctatgct 23237365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 24890113 - 24890076
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||||||||||| || |||||||||||||||    
T  24890113 catataacaatgcatgtccttgtcaactgagttatgct 24890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 4045686 - 4045718
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactga 49  Q
    ||||||||||||||||||||||||| |||||||    
T  4045686 ctgcatataacaatgcatgtccctgtcaactga 4045718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 6284909 - 6284877
Alignment:
Q  28 aatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||| ||||||||||    
T  6284909 aatgcatgtccctgccaactgaattatgctcac 6284877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 9625026 - 9624982
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  9625026 ctgcatataataatgcattgtccctgccaactgagctatgctcac 9624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 14868728 - 14868684
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  14868728 ctgcatataataatgcattgtccctgccaactgagctatgctcac 14868684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 16999968 - 16999932
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgc 56  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  16999968 catataataatgcatgtccctgccaacagagttatgc 16999932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 43
Target Start/End: Complemental strand, 27119321 - 27119293
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgcc 43  Q
    |||||||||||||||||||||||||||||    
T  27119321 ctctgcatataacaatgcatgtccctgcc 27119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 27183733 - 27183777
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  27183733 ctgcatataataatgcattgtccctgccaactgagctatgctcac 27183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 43774228 - 43774184
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||    
T  43774228 ctgcatataacaatgcattgtccctgccaactgagctatactcac 43774184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 46969037 - 46969005
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagtta 53  Q
    ||||||||||||||||| |||||||||||||||    
T  46969037 atataacaatgcatgtctctgccaactgagtta 46969005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 47191416 - 47191372
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  47191416 ctgcatataataatgcattgtccctgccaactgagctatgctcac 47191372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 52030164 - 52030120
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||    
T  52030164 ctgcatataataatacattgtccctgccaactgagttatgctcac 52030120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38807940 - 38807881
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||| || ||||||||||  |||||||||||||||||||||||||| |||||    
T  38807940 gttcgaatctcattccctgcatataattatgcatgtccctgccaactgagttatactcac 38807881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22355142 - 22355083
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||| | ||||| |||||||||||||||| ||||||||||| |||||||||    
T  22355142 gttcgaaactcaacccctgcacataacaatgcatgtccttgccaactgagctatgctcac 22355083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25463302 - 25463361
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||||| ||| ||||||||||| ||||||||||||| || |||||||||||    
T  25463302 gttcgaacctcaatccctgtatataacaatgaatgtccctgccaattgggttatgctcac 25463361  T

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Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 34376585 - 34376542
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  34376585 ctgcatataacaatgcatgtccctgccaactgaattatactcac 34376542  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 39334937 - 39334976
Alignment:
Q  21 atataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  39334937 atataataatgcatgtccctgccaactgagttatgctcac 39334976  T

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Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 19064942 - 19064984
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  19064942 ctctacatataacaatgcatgtccctgccaaatgagttatgct 19064984  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 19352911 - 19352866
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  19352911 ctctgcatataacaatgcatgtctctgtcaactgagttatgttcac 19352866  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18065313 - 18065253
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||| ||||| | ||||||||||||||||||| | || ||||||||| ||||||||||    
T  18065313 gttcgaacctcaacccctgcatataacaatgcatgcctctaccaactgagctatgctcaca 18065253  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36277757 - 36277797
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  36277757 catataacaatgcatgtcactgccaactgagctatgctcac 36277797  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 40471211 - 40471159
Alignment:
Q  2 ttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttat 54  Q
    |||||||| ||| | |||||||||| |||||||||||||| ||||||||||||    
T  40471211 ttcgaatcccaacccctgcatataataatgcatgtccctgtcaactgagttat 40471159  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 2057524 - 2057481
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| || ||||||||||||||| |||||||||    
T  2057524 ctgcatataacaatgtatatccctgccaactgagctatgctcac 2057481  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 5772903 - 5772860
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||    
T  5772903 ctgcatataacaatacatgtccttgccaactgagctatgctcac 5772860  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 14307746 - 14307789
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||| |||||||||  ||||||||    
T  14307746 ctgcatataacaatgcatgtccctaccaactgagccatgctcac 14307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 34107333 - 34107274
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||| ||||| | ||||||||||  || ||||||||||||||||||| |||||||||    
T  34107333 gttcgaacctcaacccctgcatataattatacatgtccctgccaactgagctatgctcac 34107274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 39118436 - 39118393
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||    
T  39118436 ctgcatataacaatgtatgtccctaccaactgagttacgctcac 39118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 44132613 - 44132648
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgag 50  Q
    ||||||||||||||||||||||| ||||||||||||    
T  44132613 ctctgcatataacaatgcatgtctctgccaactgag 44132648  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 218150 - 218108
Alignment:
Q  18 tgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||||||||||||| | | ||||||||||    
T  218150 tgcatataacaatgcatgtccctgccaaataaattatgctcac 218108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 26975348 - 26975382
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactga 49  Q
    ||||||||||| |||||||||||||||||||||||    
T  26975348 ctctgcatatagcaatgcatgtccctgccaactga 26975382  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 36386165 - 36386207
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctca 59  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  36386165 ctgcatataacaatgcatatccctaccaactgagctatgctca 36386207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 3037674 - 3037715
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgct 57  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  3037674 ctgcatataacaatgcattgtcccagccaactgagttatgct 3037715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 6496479 - 6496442
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgct 57  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  6496479 catataacaatgcatgtcccttccaactgagctatgct 6496442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 41288089 - 41288134
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||  |||| |||||||||||||||| |||||    
T  41288089 ctctgcatataacaatgtttgtctctgccaactgagttatactcac 41288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42211579 - 42211526
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttat 54  Q
    |||||||  |||||||||  ||||||||||||||||| ||||||||||| ||||    
T  42211579 gttcgaacttcaatctctatatataacaatgcatgtcactgccaactgaattat 42211526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11001769 - 11001829
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactgagttatgctcaca 61  Q
    ||||||||| | | |||||||||||| |||||||||| ||| |||||||  ||||||||||    
T  11001769 gttcgaatcccgacctctgcatataataatgcatgtctctgtcaactgacctatgctcaca 11001829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 11133119 - 11133075
Alignment:
Q  17 ctgcatataacaatgca-tgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| ||||||| ||||||||| |||||||||    
T  11133119 ctgcatataacaatgcattgtccctaccaactgagctatgctcac 11133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 13294436 - 13294464
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaa 45  Q
    |||||||||||||||||||||||||||||    
T  13294436 ctgcatataacaatgcatgtccctgccaa 13294464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 29664646 - 29664602
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||    
T  29664646 ctgcatataacaatgcattgtccctgccaattgagctatgctcac 29664602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29713125 - 29713173
Alignment:
Q  1 gttcgaatctcaatctctgcatataacaatgcatgtccctgccaactga 49  Q
    ||||||| | ||||| ||||||||||||||| |||||| ||||||||||    
T  29713125 gttcgaaccccaatccctgcatataacaatgtatgtccgtgccaactga 29713173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 32677375 - 32677335
Alignment:
Q  20 catataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||| | |||| ||||||||||||||||||    
T  32677375 catataacaatgcatattcctgtcaactgagttatgctcac 32677335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 883 - 928
Alignment:
Q  15 ctctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  883 ctctgcatataacaatgtatgtccctgacaactgagttatgctcac 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1343 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1343
Description:

Target: scaffold1343; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 929 - 969
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgct 57  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  929 ctgcatataacaatgcatgttcttgccaactgagttatgct 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 25013 - 25056
Alignment:
Q  17 ctgcatataacaatgcatgtccctgccaactgagttatgctcac 60  Q
    |||||||||||| |||||||| |||||||||||| |||||||||    
T  25013 ctgcatataacattgcatgtctctgccaactgagatatgctcac 25056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12608 - 12563
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcaca 61  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  12608 ctgcatataataatgcattgtccctgccaactgagctatgctcaca 12563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 4857 - 4901
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  4857 ctgcatataataatgcattgtccctgccaactgagctatgctcac 4901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 25069 - 25025
Alignment:
Q  17 ctgcatataacaatgcat-gtccctgccaactgagttatgctcac 60  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||    
T  25069 ctgcatataataatgcattgtccctgccaactgagctatgctcac 25025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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