View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17064_low_18 (Length: 250)

Name: NF17064_low_18
Description: NF17064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17064_low_18
NF17064_low_18
[»] scaffold0012 (1 HSPs)
scaffold0012 (14-250)||(123277-123513)
[»] scaffold0006 (10 HSPs)
scaffold0006 (14-250)||(213593-213830)
scaffold0006 (14-250)||(77630-77866)
scaffold0006 (14-202)||(126756-126946)
scaffold0006 (14-192)||(192014-192192)
scaffold0006 (26-239)||(235181-235396)
scaffold0006 (14-192)||(122317-122494)
scaffold0006 (27-245)||(3437-3645)
scaffold0006 (84-239)||(14319-14476)
scaffold0006 (146-224)||(64015-64093)
scaffold0006 (147-239)||(122225-122314)
[»] chr1 (20 HSPs)
chr1 (14-239)||(15890164-15890388)
chr1 (14-239)||(13617723-13617948)
chr1 (14-250)||(13694914-13695150)
chr1 (14-239)||(20499200-20499425)
chr1 (14-239)||(13446006-13446229)
chr1 (14-192)||(20384373-20384551)
chr1 (14-202)||(13478943-13479130)
chr1 (14-239)||(13524918-13525137)
chr1 (14-192)||(13561827-13562006)
chr1 (14-239)||(19079759-19079980)
chr1 (14-239)||(19127647-19127868)
chr1 (14-239)||(20576511-20576731)
chr1 (14-156)||(20451786-20451927)
chr1 (14-156)||(20538424-20538565)
chr1 (14-156)||(20544285-20544426)
chr1 (26-225)||(20449964-20450172)
chr1 (26-225)||(20535729-20535937)
chr1 (195-250)||(20451933-20451988)
chr1 (195-250)||(20538571-20538626)
chr1 (195-250)||(20544432-20544487)
[»] scaffold0069 (1 HSPs)
scaffold0069 (14-192)||(64200-64378)
[»] chr8 (1 HSPs)
chr8 (14-202)||(20760380-20760567)
[»] chr6 (3 HSPs)
chr6 (14-245)||(21819161-21819381)
chr6 (14-244)||(22268240-22268470)
chr6 (26-239)||(21835415-21835630)
[»] scaffold0238 (1 HSPs)
scaffold0238 (26-239)||(20341-20552)
[»] scaffold0783 (1 HSPs)
scaffold0783 (14-212)||(3541-3739)
[»] scaffold0355 (2 HSPs)
scaffold0355 (14-192)||(12383-12562)
scaffold0355 (14-192)||(14723-14902)


Alignment Details
Target: scaffold0012 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 123513 - 123277
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  123513 aaataacaacataaattgaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcatatgtttcttgcgcctgtgcttca 123414  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  123413 tcgcaatagtcaaacacaaatacacgaaaggggtgaataatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 123314  T
Q  214 ttctttcacaagacataagttttctttcaaggaacac 250  Q
    || ||||||||||||||||||||||||||||||||||    
T  123313 ttgtttcacaagacataagttttctttcaaggaacac 123277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 210; Significance: 1e-115; HSPs: 10)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 213830 - 213593
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttc-tcacatgtttcttgcgcctgtgcgtc 112  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  213830 aaataacaacataaatagaaaattaaagaaatttttcccaacaccaatataaatagctcctttgcactacttcatcacatgtttcttgtgcctgtgcgtc 213731  T
Q  113 atcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattca 212  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  213730 atcgcaatagtcaaacacaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattca 213631  T
Q  213 attctttcacaagacataagttttctttcaaggaacac 250  Q
    ||| ||||||||||||||||||||||||||| ||||||    
T  213630 attgtttcacaagacataagttttctttcaaagaacac 213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 77866 - 77630
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||| |||||||||| |||||| ||| ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||    
T  77866 aaatagcaacataaattgaaaataaaataaagtcttccaaacaccgatataaatagctcctttgcactacttctcacatgtttattgcacctgtgcatca 77767  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    | |||||  |||||| ||||| || |||||||||||||||||| ||||||| |||| |||||||||| |||| |||||| ||||||||| ||||||||||    
T  77766 ttgcaatcatcaaacacaaattcatgaaaggggtgagtaatcacgtttcataaagtgtaataataaattagacaaacacctataaataatatcaattcaa 77667  T
Q  214 ttctttcacaagacataagttttctttcaaggaacac 250  Q
    || ||| ||||| ||| ||||||||||||||| ||||    
T  77666 ttgttttacaagccatcagttttctttcaagggacac 77630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 126946 - 126756
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatata--aatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgt 111  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||| ||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  126946 aaataacaacataaataaaaaataaaagaaagtcttccaaaccccaatatataaatagctccttggcactacttctcacatgtttctttcgcctgtgcgt 126847  T
Q  112 catcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataa 202  Q
    ||||  ||| ||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||||    
T  126846 catcctaatcgtcaaacacaaatacatgaaaggggtgagtaatcaagtttcataatgtataataataaattagacaaacacgtataaataa 126756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 192192 - 192014
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  192192 aaataacaacgtaaatataaaataaaagaaagtcttccaaacaccaatataaatagctccttggcactacttctcacatgtttcttgcgcctgtgcgtca 192093  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    ||  ||| ||||||| |||||||| | |||||||||||||||||||||||| | ||||||||||||| |||| ||||||    
T  192092 tcctaatcgtcaaacacaaatacatgcaaggggtgagtaatcaagtttcataatgtataataataaattagacaaacac 192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 235396 - 235181
Alignment:
Q  26 aaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtcatcgcaatagtca 125  Q
    ||||||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||   ||||| |||| ||||| ||||    
T  235396 aaatagaaattaaaagaaagtcttccaaacaccaatataaattgctccttggcactaattctcacatgtttcttgcatatgtgcatcatagcaatcgtca 235297  T
Q  126 aacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac--gtataaataacatcaattcaattctttcaca 223  Q
    ||| ||||||||||||| ||||||||||||||||||  | | ||||| ||||||| |||| ||||||   |||||||||||||||||||| |||||||||    
T  235296 aacacaaatacacgaaatgggtgagtaatcaagttttgtaacgtatactaataaattagacaaacacatatataaataacatcaattcaactctttcaca 235197  T
Q  224 agacataagttttctt 239  Q
    || |||||||||||||    
T  235196 aggcataagttttctt 235181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 122494 - 122317
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||| |||||||||||||| ||||||| |||| | ||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||    
T  122494 aaataacatcataaatagaaaat-aaagaaagtctttcaaacgccaatataaatagctccttggcactaattctcacatgtttcttgcgtctgtgcatca 122396  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    |||||||   ||||| ||||||||| ||| ||||||||||||||||||||| ||||||| ||||||| |||| ||||||    
T  122395 tcgcaatcaccaaacacaaatacacaaaatgggtgagtaatcaagtttcataaagtatactaataaattagacaaacac 122317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 3645 - 3437
Alignment:
Q  27 aatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtcatcgcaatagtcaa 126  Q
    |||||||||| ||||||| |||||| ||| |||||||||||||||| || | ||||||| | |||| ||||||| ||||||||||||| |||||  ||||    
T  3645 aatagaaaataaaagaaagtcttccaaacgccaatataaatagctctttggaactacttataacatatttcttgtgcctgtgcgtcattgcaatcatcaa 3546  T
Q  127 acgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaattctttcacaaga 226  Q
    || |||||||||||||||||||||||||| |||||||| |||||||||| |||||   |||      |||||||||||||||||||||||| | |||||     
T  3545 acacaaatacacgaaaggggtgagtaatc-agtttcataaagtataatagtaaac---ata------tataaataacatcaattcaattctattacaagg 3456  T
Q  227 cataagttttctttcaagg 245  Q
    |||||||||||||| ||||    
T  3455 cataagttttctttgaagg 3437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 14476 - 14319
Alignment:
Q  84 ttctcacatgtttcttgcgcctgtgcgtcatcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaacta 183  Q
    ||||||||||||||||||   |||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||||||  | | ||||| ||||||| ||    
T  14476 ttctcacatgtttcttgcatatgtgcgtcatcgcaatcgtcaaacacaaatacacgaaatgggcgagtaatcaagttttgtaacgtatactaataaatta 14377  T
Q  184 gataaacac--gtataaataacatcaattcaattctttcacaagacataagttttctt 239  Q
    || ||||||   ||||||||||||||||||||  |||||| ||| |||||||||||||    
T  14376 gacaaacacatatataaataacatcaattcaacgctttcagaaggcataagttttctt 14319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 64093 - 64015
Alignment:
Q  146 gtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaattctttcacaa 224  Q
    ||||||||||||||||||| || |||||||| | | |||| ||||||||||||||||||||||||||||||||||||||    
T  64093 gtgagtaatcaagtttcataaaatataataacagattagacaaacacgtataaataacatcaattcaattctttcacaa 64015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 122314 - 122225
Alignment:
Q  147 tgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaattctttcacaagacataagttttctt 239  Q
    |||||||||||||||||| ||||||| ||||||| |||| ||||||  |||||||| || ||||||| | ||||||||  |||||||||||||    
T  122314 tgagtaatcaagtttcataaagtatactaataaattagacaaacac--ataaataa-attaattcaactatttcacaatgcataagttttctt 122225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 15890164 - 15890388
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||    
T  15890164 aaataacaacataaatagaaaataaaagaaagtcttccaaacatcaatataaatagcttcttgacactacttctcacatgtttcttgcgcctgtgcgtca 15890263  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    ||||||| ||||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  15890264 tcgcaatcgtcaaacacaaatacacgaaa-ggatgagtaatcaagtttcataaagtataataataaacaagacaaacacgtataaataacatcaattcaa 15890362  T
Q  214 ttctttcacaagacataagttttctt 239  Q
    |||||||| |||||||||||||||||    
T  15890363 ttctttcataagacataagttttctt 15890388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 13617948 - 13617723
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||| |||||||||| ||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  13617948 aaataacaacatgaatagaaaataaaagaaagtcttcaaaacaccaatataaatagctccttggcactacttctcacatgtttcttgcgtctgtgcgtca 13617849  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    ||||||| ||||||| ||||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||| |||||| ||||||||||||||||||||    
T  13617848 tcgcaatcgtcaaacacaaatacacgaaatgggtgagtaatcaagtttcataacgtatactaataaattagacaaacacatataaataacatcaattcaa 13617749  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     |||||||||||   |||||||||||    
T  13617748 gtctttcacaagcattaagttttctt 13617723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 13695150 - 13694914
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||||||||||||||||| ||| ||| |||||| ||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  13695150 aaataacaacataaatagaaaataaaacaaagtcttccaaacgccaatataaatagctccttggcactacgtctcacatgttttttgcgcctgtgcgtca 13695051  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    || |||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||| |||||| ||||||||| |||| ||| |    
T  13695050 tcacaatcgtcaaacacaaatacacgaaaggggtgagcaatcaagtttcataaagtataataataaattagacaaacacatataaataatatcatttcta 13694951  T
Q  214 ttctttcacaagacataagttttctttcaaggaacac 250  Q
     ||||||||||| |||||||||| |||||||| ||||    
T  13694950 gtctttcacaaggcataagttttatttcaagggacac 13694914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 20499200 - 20499425
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||| |||||||||| ||||||| |||||  ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||    
T  20499200 aaataacaacatgaatagaaaataaaagaaagtcttcaaaacaccaatataaatagctccttggaactacttctcacatgtttcttgcgcctgtgcatca 20499299  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    ||||||| | ||||| ||||||||||||| ||||||||||||||||||||| | ||||| ||||||| |||| |||||  ||||||||||||||||||||    
T  20499300 tcgcaatcgacaaacacaaatacacgaaatgggtgagtaatcaagtttcataacgtatactaataaattagacaaacaaatataaataacatcaattcaa 20499399  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     |||||||||||   |||||||||||    
T  20499400 gtctttcacaagcattaagttttctt 20499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 13446229 - 13446006
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||| ||||||||||||| ||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| | |||    
T  13446229 aaataacaaaataaatagaaaat-aaagaaagtcttccaaacgccaatataaatagctccttggcactacttctcacatgtttcttgcgtctgtacatca 13446131  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    | ||||| ||||||| ||||||||| ||  ||||||||||||||||||||| ||||||| ||||||| |||| |||||| ||||||||| ||||||||||    
T  13446130 ttgcaatcgtcaaacacaaatacacaaagtgggtgagtaatcaagtttcataaagtatactaataaattagacaaacacatataaataa-atcaattcaa 13446032  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     | ||||||||| |||||||||||||    
T  13446031 ctatttcacaaggcataagttttctt 13446006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 20384551 - 20384373
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  20384551 aaataacaacgtaaatataaaataaaagaaagtcttccaaacacgaatataaatagctccttggcactacttctcacatgtttcttgcgcctgcgcgtca 20384452  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    ||  ||| ||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||    
T  20384451 tcctaatcgtcaaacacaaatacatgaaaggggtgagtaatcaagtttcataatgtataataataaattagacaaacac 20384373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 13479130 - 13478943
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||||||  ||||||||| ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  13479130 aaataacaacatggatagaaaataaaagaaagtcttccaaacaccaatataaatagctccttgacactacttctcacatgtttcttgcgcctgtgcgtca 13479031  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataa 202  Q
    ||  ||| ||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| |||| |||| |||||| |||||||||    
T  13479030 tcctaatcgtcaaacacaaatacatgaaaggggtgaataatcaagtttcataatgtataatactaaattagacaaacac-tataaataa 13478943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 239
Target Start/End: Complemental strand, 13525137 - 13524918
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||| |||||||||||||| ||||||| |||| | ||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  13525137 aaataacagcataaatagaaaat-aaagaaagtctttcaaacgccaatataaatagctccttggcactacttctcacatgtttcttgcgtctgtgcatca 13525039  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    |||||||   ||||| ||||||||| ||| ||||||||||||||||||||| ||||||| ||||||| |||| ||||||    |||||| || |||||||    
T  13525038 tcgcaatcaccaaacacaaatacacaaaatgggtgagtaatcaagtttcataaagtatactaataaattagacaaacac----aaataa-attaattcaa 13524944  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     | ||||||||  |||||||||||||    
T  13524943 ctatttcacaatgcataagttttctt 13524918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 13562006 - 13561827
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaat-tcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtc 112  Q
    |||||||||| |||||| ||||| ||| |||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13562006 aaataacaacgtaaatataaaataaaaaaaaagtcttccaaacaccaatataaatagctccttggcactacttctcacatgtttcttgcgcctgtgcgtc 13561907  T
Q  113 atcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    | |  ||| ||||||| |||||||| |||||||||||||||||||||||||| | ||| ||||||||| |||| ||||||    
T  13561906 aacctaatcgtcaaacacaaatacatgaaaggggtgagtaatcaagtttcataatgtacaataataaattagacaaacac 13561827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 19079759 - 19079980
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||||||||||||||||| ||||||| |||| | ||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  19079759 aaataacaacataaatagaaaat-aaagaaagtctttcaaacgccaatattaatagctccttggcactacttctcacatgtttcttgcgtctgtgcatca 19079857  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    |||||||   ||||| ||||||||| ||| | ||||||||||||||||||| ||||||| ||||||| |||| | ||||  |||||||| || |||||||    
T  19079858 tcgcaatcaccaaacacaaatacacaaaatgagtgagtaatcaagtttcataaagtatactaataaattagacatacac--ataaataa-attaattcaa 19079954  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     | ||||||||  |||||||||||||    
T  19079955 ctatttcacaatgcataagttttctt 19079980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 19127647 - 19127868
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||||||||||||||||||||| ||||||| |||| | ||| ||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||    
T  19127647 aaataacaacataaatagaaaat-aaagaaagtctttcaaacgccaatattaatagctccttggcactacttctcacatgtttcttgcgtctgtgcatca 19127745  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    |||||||   ||||| ||||||||| ||| | ||||||||||||||||||| ||||||| ||||||| |||| | ||||  |||||||| || |||||||    
T  19127746 tcgcaatcaccaaacacaaatacacaaaatgagtgagtaatcaagtttcataaagtatactaataaattagacatacac--ataaataa-attaattcaa 19127842  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     | ||||||||  |||||||||||||    
T  19127843 ctatttcacaatgcataagttttctt 19127868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 20576511 - 20576731
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||| |||||||||||||| ||||||| |||| | ||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |||    
T  20576511 aaataacagcataaatagaaaat-aaagaaagtctttcaaacgccaatataaatagctccttggcacaacttctcacatgtttcttgcgtctgtgcatca 20576609  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    |||||||   ||||| ||||||||| ||| || |||||||||||||||||| ||||||| ||||||| |||| ||||||  |||||||| || |||||||    
T  20576610 tcgcaatcaccaaacacaaatacac-aaatggatgagtaatcaagtttcataaagtatactaataaattagacaaacac--ataaataa-attaattcaa 20576705  T
Q  214 ttctttcacaagacataagttttctt 239  Q
     | ||||||||  |||||||||||||    
T  20576706 ctatttcacaatgcataagttttctt 20576731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 20451786 - 20451927
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||||| |||||||| ||||||| ||||||  || |||||||||||||||| || | ||||||| | |||| ||||||||||||||||||||    
T  20451786 aaataacaacataa-tagaaaataaaagaaagtcttccagacgccaatataaatagctctttcgaactacttataacatatttcttgcgcctgtgcgtca 20451884  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatca 156  Q
    | ||||| ||||||| |||||||||||||||||||||||||||    
T  20451885 ttgcaatcgtcaaacacaaatacacgaaaggggtgagtaatca 20451927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 20538424 - 20538565
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||||| |||||||| ||||||| ||||||  || |||||||||||||||| || | ||||||| | |||| ||||||||||||||||||||    
T  20538424 aaataacaacataa-tagaaaataaaagaaagtcttccatacgccaatataaatagctctttcgaactacttataacatatttcttgcgcctgtgcgtca 20538522  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatca 156  Q
    | ||||| ||||||| |||||||||||||||||||||||||||    
T  20538523 ttgcaatcgtcaaacacaaatacacgaaaggggtgagtaatca 20538565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 156
Target Start/End: Original strand, 20544285 - 20544426
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||||| |||||||| ||||||| ||||||  || |||||||||||||||| || | ||||||| | |||| ||||||||||||||||||||    
T  20544285 aaataacaacataa-tagaaaataaaagaaagtcttccatacgccaatataaatagctctttcgaactacttataacatatttcttgcgcctgtgcgtca 20544383  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatca 156  Q
    | ||||| ||||||| |||||||||||||||||||||||||||    
T  20544384 ttgcaatcgtcaaacacaaatacacgaaaggggtgagtaatca 20544426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 20449964 - 20450172
Alignment:
Q  26 aaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcct-------gtgcgtcatcgca 118  Q
    ||||||||| | ||||||| |||||| ||||||||||||||| ||||||| | |||| |||| ||||||||||||   ||       ||||| ||| |||    
T  20449964 aaatagaaattaaaagaaagtcttccaaacaccaatataaattgctccttggtactaattctaacatgtttcttggctcttgcatatgtgcggcattgca 20450063  T
Q  119 atagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac--gtataaataacatcaattcaattc 216  Q
    || ||||| | ||||||||||||| || |||||||||||||||  | | ||||| ||||||| |||| | ||||   |||||||||||||||||||| ||    
T  20450064 atcgtcaatcacaaatacacgaaatggatgagtaatcaagttttgtaacgtatactaataaattagacagacacatatataaataacatcaattcaaatc 20450163  T
Q  217 tttcacaag 225  Q
    |||||||||    
T  20450164 tttcacaag 20450172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 20535729 - 20535937
Alignment:
Q  26 aaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcct-------gtgcgtcatcgca 118  Q
    ||||||||| | ||||||| |||||| ||||||||||||||| ||||||| | |||| |||| ||||||||||||   ||       ||||| ||| |||    
T  20535729 aaatagaaattaaaagaaagtcttccaaacaccaatataaattgctccttggtactaattctaacatgtttcttggctcttgcatatgtgcggcattgca 20535828  T
Q  119 atagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac--gtataaataacatcaattcaattc 216  Q
    || ||||| | ||||||||||||| || |||||||||||||||  | | ||||| ||||||| |||| | ||||   |||||||||||||||||||| ||    
T  20535829 atcgtcaatcacaaatacacgaaatggatgagtaatcaagttttgtaacgtatactaataaattagacagacacatatataaataacatcaattcaaatc 20535928  T
Q  217 tttcacaag 225  Q
    |||||||||    
T  20535929 tttcacaag 20535937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 20451933 - 20451988
Alignment:
Q  195 ataaataacatcaattcaattctttcacaagacataagttttctttcaaggaacac 250  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  20451933 ataaataacatcaattcaattcttttacaaggcataagtgttctttcaagggacac 20451988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 20538571 - 20538626
Alignment:
Q  195 ataaataacatcaattcaattctttcacaagacataagttttctttcaaggaacac 250  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  20538571 ataaataacatcaattcaattcttttacaaggcataagtgttctttcaagggacac 20538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 20544432 - 20544487
Alignment:
Q  195 ataaataacatcaattcaattctttcacaagacataagttttctttcaaggaacac 250  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  20544432 ataaataacatcaattcaattcttttacaaggcataagtgttctttcaagggacac 20544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 64378 - 64200
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  64378 aaataacaacgtaaatataaaataaaagaaagtcttccaaacacgaatataaatagctccttggcactacttctcacatgtttcttgcgcctgcgcgtca 64279  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    ||  ||| ||||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||| |||| ||||||    
T  64278 tcctaatcgtcaaacacaaatacatgaaaggggtgagtaatcaagtttcataatgtataataataaattagacaaacac 64200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 20760380 - 20760567
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  20760380 aaataacaacgtaaatataaaataaaagaaagtcttccaaacaccaatataaatagctccttgacactacttctcacatgtttcttgcgcctgtgcgtca 20760479  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataa 202  Q
    ||  ||| ||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| |||| |||| |||||| |||||||||    
T  20760480 tcctaatcgtcaaacacaaatacatgaaaggggtgaataatcaagtttcataatgtataatactaaattagacaaacac-tataaataa 20760567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 21819381 - 21819161
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||||||| |||||||| ||||||| |||||| ||| |||||||||||||||| || | ||||||| | |||| ||||||||||||||||||||    
T  21819381 aaataacaacataa-tagaaaataaaagaaagtcttccaaacgccaatataaatagctctttagaactacttataacatatttcttgcgcctgtgcgtca 21819283  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaa 213  Q
    | ||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||         ||||||| |||||||||||||||||||||    
T  21819282 ttgcaatcgtcaaacacaaatacacgaaaggggtgagtaatc-agtttcataaagtataata---------ataaacatgtataaataacatcaattcaa 21819193  T
Q  214 ttctttcacaagacataagttttctttcaagg 245  Q
    |||| | ||||| |||||||||||||| ||||    
T  21819192 ttctattacaaggcataagttttctttgaagg 21819161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 22268240 - 22268470
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||| ||||||||||||  |||| ||||||| |||||| || |||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||     
T  22268240 aaattacaacataaataataaataaaagaaagtcttccaaataccaatataaatagctccttggaactactactcacatgtttcttgcacctgtgcgtcg 22268339  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtat-aataataaactagataaacacgtataaataacatcaattca 212  Q
    ||||||| ||||||| | |||||| |||| |||| |||||||||||||| | |||||| ||||| ||| |||| ||||| |||||||||||||||||| |    
T  22268340 tcgcaatcgtcaaacacgaatacatgaaa-gggtaagtaatcaagtttcgtaaagtataaataacaaattagacaaacatgtataaataacatcaattta 22268438  T
Q  213 attctttcacaagacataagttttctttcaag 244  Q
    ||||||| ||||| ||||||||||||| ||||    
T  22268439 attcttttacaaggcataagttttcttccaag 22268470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 21835630 - 21835415
Alignment:
Q  26 aaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtcatcgcaatagtca 125  Q
    ||||||||| | ||||||| |||||| ||||||||||||||| ||||||| |||||| ||||||||||||||||||   ||||| |||| ||||| ||||    
T  21835630 aaatagaaattaaaagaaagtcttccaaacaccaatataaattgctccttggcactaattctcacatgtttcttgcatatgtgcatcatagcaatcgtca 21835531  T
Q  126 aacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacac--gtataaataacatcaattcaattctttcaca 223  Q
    ||| ||||||||||||| ||||||||||||||||||  | | ||||| ||||||| |||| ||||||   |||||||||||||||||||| |||||||||    
T  21835530 aacacaaatacacgaaatgggtgagtaatcaagttttgtaacgtatactaataaattagacaaacacatatataaataacatcaattcaactctttcaca 21835431  T
Q  224 agacataagttttctt 239  Q
    || |||||||||||||    
T  21835430 aggcataagttttctt 21835415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 239
Target Start/End: Original strand, 20341 - 20552
Alignment:
Q  26 aaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtcatcgcaatagtca 125  Q
    ||||| ||||| || |||| |||||| ||||||||||||||| ||||||| ||||||||||||  |||||||||||| ||||||||||||||||| ||||    
T  20341 aaatataaaataaatgaaagtcttccaaacaccaatataaattgctccttggcactacttctccaatgtttcttgcgtctgtgcgtcatcgcaatcgtca 20440  T
Q  126 aacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattcaattctttcacaag 225  Q
    ||| |||||||| |||| ||||||||||||||||||||| | ||||| ||||||| |||| ||||||  ||||||||||||||||||| ||||||||| |    
T  20441 aacacaaatacatgaaatgggtgagtaatcaagtttcataacgtatactaataaattagacaaacac--ataaataacatcaattcaagtctttcacagg 20538  T
Q  226 acataagttttctt 239  Q
       |||||||||||    
T  20539 cattaagttttctt 20552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0783 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 3739 - 3541
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    ||||| |||||||||| |||||| ||||||| |||||| |||||  ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||    
T  3739 aaatagcaacataaattgaaaataaaagaaagtcttccaaacactgatataaatagctcctttgcactacttctcacatgtttattgcacctgtgcatca 3640  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaaggggtgagtaatcaagtttcatgaagtataataataaactagataaacacgtataaataacatcaattca 212  Q
    | |||||  |||||| ||||| || |||| ||||||||||||||||||||| |||| |||||||| | |||| |||||| ||||||||| |||||||||    
T  3639 ttgcaatcatcaaacacaaattcatgaaaagggtgagtaatcaagtttcataaagtgtaataatatattagacaaacacctataaataaaatcaattca 3541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 12562 - 12383
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  12562 aaataacaacgtaaatataaaataaaagaaagtcttccaaacacgaatataaatagctccttggcactacttctcacatgtttcttgcgcctgcgcgtca 12463  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaagggg-tgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    ||  ||| ||||| | |||||||| |||||||| |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  12462 tcctaatcgtcaagcacaaatacatgaaaggggttgagtaatcaagtttcataatgtataataataaattagacaaacac 12383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 14902 - 14723
Alignment:
Q  14 aaataacaacataaatagaaaattaaagaaattcttcccaacaccaatataaatagctcctttgcactacttctcacatgtttcttgcgcctgtgcgtca 113  Q
    |||||||||| |||||| ||||| ||||||| |||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  14902 aaataacaacgtaaatataaaataaaagaaagtcttccaaacacgaatataaatagctccttggcactacttctcacatgtttcttgcgcctgcgcgtca 14803  T
Q  114 tcgcaatagtcaaacgcaaatacacgaaagggg-tgagtaatcaagtttcatgaagtataataataaactagataaacac 192  Q
    ||  ||| ||||| | |||||||| |||||||| |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  14802 tcctaatcgtcaagcacaaatacatgaaaggggttgagtaatcaagtttcataatgtataataataaattagacaaacac 14723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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