View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17064_low_23 (Length: 206)

Name: NF17064_low_23
Description: NF17064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17064_low_23
NF17064_low_23
[»] chr5 (8 HSPs)
chr5 (15-188)||(18593038-18593211)
chr5 (14-188)||(698156-698330)
chr5 (14-177)||(34377904-34378067)
chr5 (14-100)||(29087364-29087450)
chr5 (14-77)||(7392143-7392205)
chr5 (14-111)||(13954345-13954441)
chr5 (15-105)||(8297347-8297436)
chr5 (41-113)||(39184325-39184397)
[»] chr8 (9 HSPs)
chr8 (15-188)||(32066408-32066581)
chr8 (14-188)||(37986970-37987145)
chr8 (14-187)||(9519295-9519468)
chr8 (14-188)||(34389117-34389291)
chr8 (14-188)||(24995507-24995681)
chr8 (31-188)||(31210319-31210477)
chr8 (17-182)||(36630638-36630803)
chr8 (14-111)||(10248665-10248761)
chr8 (14-111)||(17657113-17657209)
[»] chr2 (12 HSPs)
chr2 (14-188)||(10523892-10524066)
chr2 (17-188)||(39338980-39339151)
chr2 (43-131)||(7874145-7874233)
chr2 (17-184)||(17105210-17105377)
chr2 (41-131)||(16952520-16952610)
chr2 (41-131)||(17023185-17023275)
chr2 (41-131)||(17060491-17060581)
chr2 (41-131)||(17079023-17079113)
chr2 (51-111)||(37770789-37770849)
chr2 (23-113)||(14106645-14106734)
chr2 (51-95)||(22885280-22885324)
chr2 (47-95)||(23650274-23650322)
[»] chr1 (18 HSPs)
chr1 (14-188)||(41920248-41920422)
chr1 (14-188)||(31585872-31586046)
chr1 (14-183)||(46692931-46693100)
chr1 (14-185)||(5389533-5389704)
chr1 (14-188)||(30686016-30686190)
chr1 (16-188)||(20113635-20113807)
chr1 (14-188)||(24450042-24450216)
chr1 (20-182)||(24684595-24684756)
chr1 (28-123)||(7857515-7857609)
chr1 (23-131)||(24658783-24658890)
chr1 (51-121)||(50589353-50589423)
chr1 (15-77)||(9313402-9313463)
chr1 (61-111)||(10785490-10785540)
chr1 (41-131)||(38544875-38544965)
chr1 (41-121)||(17033449-17033529)
chr1 (45-111)||(6583333-6583399)
chr1 (23-93)||(46814587-46814656)
chr1 (59-131)||(27032018-27032090)
[»] chr7 (14 HSPs)
chr7 (14-185)||(38306059-38306230)
chr7 (14-188)||(47325997-47326171)
chr7 (14-182)||(3419768-3419936)
chr7 (23-188)||(37794796-37794960)
chr7 (14-188)||(10243982-10244151)
chr7 (15-178)||(5860401-5860564)
chr7 (14-188)||(25160611-25160784)
chr7 (14-178)||(3866922-3867085)
chr7 (20-184)||(33434909-33435073)
chr7 (14-72)||(41089860-41089918)
chr7 (23-131)||(34389815-34389923)
chr7 (14-130)||(6716848-6716963)
chr7 (44-111)||(8745026-8745093)
chr7 (23-100)||(35745947-35746023)
[»] scaffold0068 (1 HSPs)
scaffold0068 (14-188)||(35883-36058)
[»] chr4 (14 HSPs)
chr4 (14-188)||(30964236-30964410)
chr4 (14-188)||(4305520-4305694)
chr4 (14-182)||(8254828-8254996)
chr4 (14-182)||(8268246-8268414)
chr4 (14-111)||(22811271-22811367)
chr4 (41-121)||(12296038-12296118)
chr4 (41-91)||(6600084-6600134)
chr4 (17-75)||(30167678-30167736)
chr4 (41-121)||(46698923-46699002)
chr4 (14-100)||(53823533-53823618)
chr4 (14-103)||(19672982-19673070)
chr4 (14-111)||(25753045-25753141)
chr4 (46-95)||(28966763-28966812)
chr4 (41-121)||(21988057-21988137)
[»] chr3 (13 HSPs)
chr3 (14-188)||(20611578-20611752)
chr3 (16-188)||(47235511-47235683)
chr3 (14-188)||(2394365-2394539)
chr3 (14-188)||(34475866-34476039)
chr3 (15-188)||(45163644-45163817)
chr3 (14-181)||(2392618-2392785)
chr3 (14-182)||(19176304-19176472)
chr3 (23-123)||(23328470-23328567)
chr3 (14-100)||(4464047-4464132)
chr3 (23-131)||(40023691-40023799)
chr3 (41-111)||(14755401-14755471)
chr3 (14-95)||(823547-823627)
chr3 (14-77)||(37123289-37123351)
[»] chr6 (7 HSPs)
chr6 (14-188)||(3117288-3117462)
chr6 (14-184)||(16510413-16510575)
chr6 (23-113)||(15132643-15132732)
chr6 (41-120)||(32935477-32935556)
chr6 (14-111)||(3880695-3880791)
chr6 (46-95)||(15943908-15943957)
chr6 (14-111)||(20701915-20702011)
[»] scaffold1613 (1 HSPs)
scaffold1613 (41-131)||(1154-1244)
[»] scaffold0063 (1 HSPs)
scaffold0063 (14-111)||(58000-58096)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 18593211 - 18593038
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18593211 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatat 18593112  T
Q  115 gtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18593111 gtaaaacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacataacgtgac 18593038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 698330 - 698156
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  698330 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaaaaccagcacacaata 698231  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  698230 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacatatcaaaaagaaaaggctcaacataacgtgac 698156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 34378067 - 34377904
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||| |||||||| |||||||| |||    
T  34378067 cagagaaaacccaaatcaagtcaaacaaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaaccagcacacgata 34377968  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaa 177  Q
    | |||||||||||| ||||||| |||||||| |||||||||| ||| |||| ||||||||||||    
T  34377967 tataagacgaaagatatggcatacgaagtttaaacaacaaacgaatcaaaaggaaaaggctcaa 34377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 29087450 - 29087364
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaa 100  Q
    |||||||  |||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||    
T  29087450 cagagaattaccaaaacaagtcaaacaaagattgcagctagactccgactcccgatctcgaagccaaatgaaccggcccaccgaaaa 29087364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 7392143 - 7392205
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagc 77  Q
    |||||||| ||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||    
T  7392143 cagagaaacaccaaatcaagccaaacaa-gattgcagctagacaccaactcccgatctcgaagc 7392205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 13954345 - 13954441
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| || ||||||||||||| || ||||||| |||||| || ||||  ||||||||||| |||  ||||||||||||||||| ||||| ||||    
T  13954345 cagagaaacacaaaatcaagtcaaataa-gattgcagctagacaccgactcttgatctcgaagcaaaagtaaccggcccaccgaaaaccagcatacaa 13954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 8297436 - 8297347
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagc 105  Q
    ||||||| |||||||||||  ||||||| |||||| |||||| ||||||| |||||||||||| |||  || |||||||| ||||| ||||    
T  8297436 agagaaacaccaaatcaagcaaaacaaa-attgcagctagacaccaactctcgatctcgaagcaaaagtaatcggcccactgaaaaccagc 8297347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 39184325 - 39184397
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||| |||||||||||||||||| | |||  |||| |||||||  ||  ||||||||||||    
T  39184325 aagattgcaactagacgccaactcccgatctcgaatcaaaagtaacctgcccaccagaatccagcacacaata 39184397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 32066408 - 32066581
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  32066408 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaaaaccagcacacaatat 32066507  T
Q  115 gtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  32066508 gtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacatgac 32066581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 37986970 - 37987145
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37986970 cagagaaaaaccaaatcaagtcaaataaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaata 37987069  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctc-aacacaacgtgac 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  37987070 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaaacacaacgtgac 37987145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 9519468 - 9519295
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  9519468 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccagcacacaata 9519369  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtga 187  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9519368 tgtaagacgaaagaaatggcatgcgaagtttaaacaacaaacaaataaaaaggaaaaggctcaacacaacgtga 9519295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 34389117 - 34389291
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  34389117 cagagaaaaaccaaatcaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccagcacacaata 34389216  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  34389217 tgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 34389291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 24995507 - 24995681
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24995507 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaata 24995606  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||| |||| |||| |||||||| ||||||||| |||| |||| ||||| ||||||||||| |||||    
T  24995607 tgtaagacgaaaaacatagcatacgaagtttaaacaacaaataaatcaaaaggaaaatgctcaacacaatgtgac 24995681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 31 - 188
Target Start/End: Original strand, 31210319 - 31210477
Alignment:
Q  31 aagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa-tatgtaagacgaaagaca 129  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  31210319 aagtcaaacaaagattgcagctagaccctgactcccgatcttgaagccaaatgaaccggcccaccgaaaaccagcgcacaaatatgtaagacgaaagaca 31210418  T
Q  130 tggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  31210419 tggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 31210477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 36630803 - 36630638
Alignment:
Q  17 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||||||||||||||||||||| |||||||| || ||||||||||||    
T  36630803 agaaaaaccaaatcaagtcaaacaaagattgcagctagacctcgtctcccgatctcgaagccaaatgaaccggcctaccgaaaaccaacacacaatatgt 36630704  T
Q  117 aagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
    |||||||||||||||||||||||||||| | |||||||||||| | || ||||||| |||||||||    
T  36630703 aagacgaaagacatggcatgcgaagtttaaccaacaaacaaatcacaaggaaaaggttcaacacaa 36630638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 10248665 - 10248761
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| ||||||||||| |||||||| |||||| |||||| || ||||||||||||||||| |||  ||| ||||||||| ||| || |||||||    
T  10248665 cagagaaacaccaaatcaagccaaacaaa-attgcagctagacaccgactcccgatctcgaagcaaaagtaactggcccaccggaaaccaccacacaa 10248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 17657113 - 17657209
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| ||||||||| | |||| || ||||| | |||| | || ||||||||||||||||| |||| |||||||||| || ||| || |||||||    
T  17657113 cagagaaacaccaaatcacgccaaataa-gattgtagctagccaccgactcccgatctcgaagcaaaattaaccggcccatcggaaaccaacacacaa 17657209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 10524066 - 10523892
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  10524066 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccaccgaaaaccagcacacaata 10523967  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  10523966 tgtaagatgaaagacatggcatgcgaaatttgaacaacaaacaaatcaaaaagaaaaggctcaacacaacgtgac 10523892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 39338980 - 39339151
Alignment:
Q  17 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgt 116  Q
    |||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  39338980 agaaaaaccaaatcaagtcaaacaaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccagcacacaatatgt 39339079  T
Q  117 aagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  39339080 aagacgaaagacatggcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgac 39339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 7874233 - 7874145
Alignment:
Q  43 gattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||| |||||| |||||||||||||||||||| |||  ||||||||||||| | | ||||||||||||| |||||||| |||||||    
T  7874233 gattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggacaccagcacacaatatttaagacgatagacatg 7874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 17105377 - 17105210
Alignment:
Q  17 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgt 116  Q
    ||||| ||| ||| ||||||||||| | ||||| |||||| || |||||  ||||| |||| |||  ||||| ||||||| ||| |||||||||||||||    
T  17105377 agaaacacctaattaagtcaaacaagg-ttgcagctagacgccgactccttatctccaagcaaaagtaaccgacccaccggaaaccagcacacaatatgt 17105279  T
Q  117 aagacgaaagacatggcatgcga-agtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacg 184  Q
    |||| ||||||||||  ||| ||  ||   |||| ||||||||| |||| ||||||||||| |||||||    
T  17105278 aagatgaaagacatgatatgagatggtgcaaacaccaaacaaatcaaaaggaaaaggctcatcacaacg 17105210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 16952520 - 16952610
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||||||| || | ||||| |||||||||||  |||  |||| | ||| |||||| |||||||||||||||||||| || ||||||    
T  16952520 aagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 16952610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 17023185 - 17023275
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||||||| || | ||||| |||||||||||  |||  |||| | ||| |||||| |||||||||||||||||||| || ||||||    
T  17023185 aagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17023275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 17060491 - 17060581
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||||||| || | ||||| |||||||||||  |||  |||| | ||| |||||| |||||||||||||||||||| || ||||||    
T  17060491 aagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17060581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 17079113 - 17079023
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||||||| || | ||||| |||||||||||  |||  |||| | ||| |||||| |||||||||||||||||||| || ||||||    
T  17079113 aagattgcaactacacacaaactctcgatctcgaagtaaaagtaaccagtccatcgaaaaccagcacacaatatgtaagacaaatgacatg 17079023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 37770789 - 37770849
Alignment:
Q  51 ctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||| |||||||||||||||||||| |||  |||||||||||||| || ||||| ||||    
T  37770789 ctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccagcaaacaa 37770849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 14106645 - 14106734
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||  ||||||| |||| | || ||||||  ||||||||| |||  ||||||||||||| ||| || |||||||||    
T  14106645 accaaatcaagtcaaacag-gattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaata 14106734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 22885280 - 22885324
Alignment:
Q  51 ctagaccccaactcccgatctcgaagccaaatgaaccggcccacc 95  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||    
T  22885280 ctagacaccaactcccgatctcgaagcaaaagtaaccggcccacc 22885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 23650322 - 23650274
Alignment:
Q  47 gcaactagaccccaactcccgatctcgaagccaaatgaaccggcccacc 95  Q
    |||||||||| |||||||||| |||||||||| | | ||||||||||||    
T  23650322 gcaactagacaccaactcccggtctcgaagcctagttaaccggcccacc 23650274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 41920422 - 41920248
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  41920422 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaata 41920323  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  41920322 tgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 41920248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 31585872 - 31586046
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| ||    
T  31585872 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccaaaaatcagcaaacacta 31585971  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||    
T  31585972 tgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacataacgtgac 31586046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 46692931 - 46693100
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  46692931 cagagaaaaatcaaatcaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaaaactagcacacaata 46693030  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaac 183  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  46693031 tgtaagacaaaagacatggcatgtgaagtttgaacaacaaacaaatcaaaaagaaaaggctcaacacaac 46693100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 5389533 - 5389704
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5389533 cagagaaaaatcaaatcaagtcaaacaaagattgcagctagacccggactcccgatctcgaagccaaatgaaccggcccactgaaaaccagcacacaata 5389632  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgt 185  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||    
T  5389633 tgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggcttaacacaacgt 5389704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 30686016 - 30686190
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||| |||||||  |||||| | |||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  30686016 cagagaaaaaccaaatcaagtcaaacaaggattgcagttagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccaacacacaata 30686115  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||| || | ||||||||| ||||||||||| || |||| |||||||||||||||||||||||    
T  30686116 tgtaagacgaaagacaaggtaagcgaagtttaaacaacaaacagatcaaaaggaaaaggctcaacacaacgtgac 30686190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 20113635 - 20113807
Alignment:
Q  16 gagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatg 115  Q
    ||||||||||||| ||  || ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  20113635 gagaaaaaccaaaccatatctaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaatatg 20113734  T
Q  116 taagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| |||| |||||| ||||| | ||||||||    
T  20113735 taagatgaaagacatggcatgcaaagtttaaacaacaaacaaatcaaaaggaaaagcctcaatataacgtgac 20113807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 24450042 - 24450216
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||| || |||| ||||    
T  24450042 cagagaaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaacacataata 24450141  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||||| |||||||||| || |||||||||||  ||| || ||| ||||||||| ||||||    
T  24450142 tgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatccaaaggacaagactcaacacagcgtgac 24450216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 24684595 - 24684756
Alignment:
Q  20 aaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaag 119  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||    
T  24684595 aaaaccaaatcaagtcaaacaaagattacagctagaccccgactcccgatctcgaagccaaatgaattggcc-accgaaaaccagcacacaatatgtaag 24684693  T
Q  120 acgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
    ||||||||||||||||||||||||| | ||||| |||||| | || ||||||||||| |||||    
T  24684694 acgaaagacatggcatgcgaagtttaaccaacagacaaatcacaaggaaaaggctcatcacaa 24684756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 7857609 - 7857515
Alignment:
Q  28 atcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacga 123  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| |||  || |||||||| | ||| ||||||||||||||||||||||    
T  7857609 atcaagtcaaacata-attgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaatatgtaagacga 7857515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 24658890 - 24658783
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacg 122  Q
    |||| |||||||||||||  ||||||| |||||| |||||||||||||| ||||| |||  ||||||||||||| |   |||||||||| ||||||||||    
T  24658890 accatatcaagtcaaacat-gattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggactccagcacacaaaatgtaagacg 24658792  T
Q  123 aaagacatg 131  Q
    | |||||||    
T  24658791 atagacatg 24658783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 50589353 - 50589423
Alignment:
Q  51 ctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagac 121  Q
    |||||| |||| ||||||||||||||| |||| ||||||||||||  ||  ||||||||||||||||||||    
T  50589353 ctagacgccaagtcccgatctcgaagcaaaattaaccggcccaccagaatccagcacacaatatgtaagac 50589423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 9313402 - 9313463
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagc 77  Q
    ||||||| ||||||||| | |||||||| |||||| |||||| ||||||||||||||||||||    
T  9313402 agagaaacaccaaatcacggcaaacaaa-attgcagctagacaccaactcccgatctcgaagc 9313463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 10785490 - 10785540
Alignment:
Q  61 actcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    ||||||||||||||||| |||| ||||||||||||| ||| ||||||||||    
T  10785490 actcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaa 10785540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 38544875 - 38544965
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||| |||||| ||||||||| |||||||||| |||  || ||||||||   ||  |||||||||||||||||||| || ||||||    
T  38544875 aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaaacgacatg 38544965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 17033529 - 17033449
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagac 121  Q
    |||||||||||||||| |||| || |||||||||| | |||  ||||||||||||  ||  |||||||||||| |||||||    
T  17033529 aagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaataagtaagac 17033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 6583333 - 6583399
Alignment:
Q  45 ttgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    ||||| |||||| || ||||||||||||||||| |||  |||||||||||||| || || |||||||    
T  6583333 ttgcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaa 6583399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 46814587 - 46814656
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggccca 93  Q
    |||| |||||||||||||  |||||||||||||| ||||||| |||||||||| | |||  ||||||||||    
T  46814587 accatatcaagtcaaacag-gattgcaactagacaccaactctcgatctcgaatcaaaaataaccggccca 46814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 27032018 - 27032090
Alignment:
Q  59 caactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||| ||||||||||||| |||  || ||||| | || | | |||||||||||||||||||||| |||||||    
T  27032018 caacttccgatctcgaagcaaaaataatcggccgatcggacaccagcacacaatatgtaagacgatagacatg 27032090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 38306230 - 38306059
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  38306230 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaaccagcacacaata 38306131  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgt 185  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||    
T  38306130 tgtaagatgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgt 38306059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 47325997 - 47326171
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  47325997 cagagaaaaaccaaatcaagttaaacaaagattgctgctagaccccgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaata 47326096  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  47326097 tgtaagaagaaagacatggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 47326171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 3419768 - 3419936
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  3419768 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggctcgccgaaaaccagcacacaata 3419867  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||||    
T  3419868 tgtaagacgaaagacatggcatgtgaagtttaaacaacaaacaaatcaaaaggaaagggctcaacacaa 3419936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 37794960 - 37794796
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacg 122  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||     
T  37794960 accaaatcaagtcaaacaaagattgcagctagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaatatgtaaaaca 37794861  T
Q  123 aaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||| |  ||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||    
T  37794860 aaagtc-cggcatgcgaagtttgaacaacaaacaaatcaaaaggaaaatgctcaacacaatgtgac 37794796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 10244151 - 10243982
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  10244151 cagagaaaaaccaaatcta-tcaaacaaagattgcaactagatcccgactcccgatctcgaagccaaatgaaccagccaaccgaaaaccagcacacaata 10244053  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||    
T  10244052 tgtaagacgaaa-acatggcatgcgaagtttgaacaacaaaca---aaaaaagaaaaggctcaaaacaacgtgac 10243982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 5860401 - 5860564
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatat 114  Q
    |||||||||||||||  || |||||||||||||||  |||||| | ||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5860401 agagaaaaaccaaattcagccaaacaaagattgcagatagacctcgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaatat 5860500  T
Q  115 gtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaac 178  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| |||| || |||| |||||    
T  5860501 gtaagacgaaagacatggcgagcgaagtttaaacaacaaacaaatcaaaaggagaaggttcaac 5860564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 25160784 - 25160611
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||| | |||||||||||| |  ||||||||||| ||| ||||||||    
T  25160784 cagagaaaaaccaaaccaagtcaaacaaaaatagcaactagaccccgactcccgatcccaaagccaaatgaatcatcccaccgaaaaccagtacacaata 25160685  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||| |||| ||| ||| |||| ||||||||||    
T  25160684 tgtaagacaaaagacatggcatgcgtagtttaaacaacaaacaaatcaaaaggaataggttcaa-acaacgtgac 25160611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 178
Target Start/End: Complemental strand, 3867085 - 3866922
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||| |||| |||||||||||| |||  || || ||||||||||  ||| ||||||||    
T  3867085 cagagaaaaaccatatcaagtcaaacaaagattgtagctagaccccgactctcgatctcgaagcaaaagtaatcgacccaccgaaac-caggacacaata 3866987  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaac 178  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| |||| |||| |||||||||||||    
T  3866986 tgtaagacgaaagacgtggcatgtgaagtttaaacaacaaataaatcaaaaggaaaaggctcaac 3866922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 184
Target Start/End: Complemental strand, 33435073 - 33434909
Alignment:
Q  20 aaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaag 119  Q
    ||||||||||||||  ||||||||||| |||||||||||  ||| ||||||||||||| |||  || |||||||||| ||| || ||||||||||||||     
T  33435073 aaaaccaaatcaagctaaacaaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaatatgtaat 33434974  T
Q  120 acgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacg 184  Q
    ||||| |||||||||||| |||||| |||||| |||  ||  ||| |||||||||| ||||||||    
T  33434973 acgaatgacatggcatgcaaagtttaaacaaccaacctatcgaaaggaaaaggctcgacacaacg 33434909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 41089860 - 41089918
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctc 72  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  41089860 cagagaaaaaccaaatcaagtcaaacaaagattgtagctagaccccaactctcgatctc 41089918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 34389923 - 34389815
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacg 122  Q
    |||| |||||||||||  | |||||||||||||| |||||| | ||||||||||| |||  ||| |||||| |  | | |||||||||||||||| ||||    
T  34389923 accatatcaagtcaaaacatgattgcaactagacaccaacttctgatctcgaagcaaaaataactggcccatcagacaccagcacacaatatgtacgacg 34389824  T
Q  123 aaagacatg 131  Q
    | |||||||    
T  34389823 atagacatg 34389815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 6716848 - 6716963
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||| | ||||||||| |||| || ||||||| |||||| || |||||||||||| |||  |||  ||| ||||||||||||| |||||| ||| |    
T  6716848 cagagaaacatcaaatcaagccaaataa-gattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaaaccagcacgcaaaa 6716946  T
Q  114 tgtaagacgaaagacat 130  Q
     ||||||| || |||||    
T  6716947 agtaagacaaatgacat 6716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 8745093 - 8745026
Alignment:
Q  44 attgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||| |||||| ||  || ||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  8745093 attgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaa 8745026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 35745947 - 35746023
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaa 100  Q
    |||| |||||||||||||| ||||||  |||| | |||||| ||||||||||||| |||  |||||| ||||||||||    
T  35745947 accatatcaagtcaaacaa-gattgctgctagtcaccaacttccgatctcgaagcaaaagtaaccggtccaccgaaaa 35746023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 35883 - 36058
Alignment:
Q  14 cagagaaaaaccaaa-tcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaat 112  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  35883 cagagaaaaaccaaaattaagtcaaacaaagattgcaactagacctcgactcccgatctcgaagccaaatgaaccggcccaccgaaagccagcacacaat 35982  T
Q  113 atgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  35983 atgtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 36058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 30964410 - 30964236
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  30964410 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgacttccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacaata 30964311  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
     |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||    
T  30964310 agtaagacgaaagacatggcatgcgaagtttaaacaacaaacaaatcaaaaggaaaaggttcaacacaacgtgac 30964236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 4305694 - 4305520
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  4305694 cagagaaaaacgaaatccagtcaaacaaagattgcaactagcccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagtacacaata 4305595  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||   ||| |||||||||||||||||||||||    
T  4305594 tgtaagacaaaagacatggcaagcgaagtttaaacaacaaacaaaactaaaggaaaaggctcaacacaacgtgac 4305520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 8254996 - 8254828
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||||| ||||||||||| || ||||||| | ||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  8254996 cagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaata 8254897  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||||||||||    
T  8254896 tgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaa 8254828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 8268414 - 8268246
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||||||||||| ||||||||||| || ||||||| | ||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  8268414 cagagaaaaaccaaatcaagtgaaacaaagattacagctagacctcgactcccgatctcgaagccaaaagaaccggcccaccgaaaaccaacacacaata 8268315  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||| |||| |||||||||||||||||    
T  8268314 tgtaagacgaaagacatggcatgcaaagtttaaacaacaaacgaatcaaaaggaaaaggctcaacacaa 8268246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 22811271 - 22811367
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| |||||||||   |||||||| ||||||||||||| |||| | ||||||||||||| |||  ||||| ||||||||||| ||||||||||    
T  22811271 cagagaaacaccaaatcacaccaaacaaa-attgcaactagacaccaagttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaa 22811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 12296118 - 12296038
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagac 121  Q
    |||| |||| |||||| |||||||||||||||||||| |||  || |||||||||  ||  ||||||||||||||||||||    
T  12296118 aagaatgcagctagacgccaactcccgatctcgaagcaaaagtaatcggcccaccagaatccagcacacaatatgtaagac 12296038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 6600084 - 6600134
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcc 91  Q
    |||||||||||||||| ||||||||||||||| |||| |||| ||||||||    
T  6600084 aagattgcaactagacaccaactcccgatctcaaagcaaaattaaccggcc 6600134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 30167678 - 30167736
Alignment:
Q  17 agaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaa 75  Q
    |||||| | ||||||| |||||||||||||| | ||||||||| |||||||||||||||    
T  30167678 agaaaacctaaatcaaatcaaacaaagattgtagctagaccccgactcccgatctcgaa 30167736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 46698923 - 46699002
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagac 121  Q
    |||| |||| |||||| |||||||||||||||||||| |||  || |||||||| | ||  ||||||||||||||||||||    
T  46698923 aagactgcagctagacaccaactcccgatctcgaagcaaaagtaatcggcccacag-aatccagcacacaatatgtaagac 46699002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 53823533 - 53823618
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaa 100  Q
    |||||||| ||||| ||||| ||| ||| |||||||  ||||| || ||||||||||||||||| |||  |||||||||||| ||||    
T  53823533 cagagaaacaccaagtcaagccaagcaa-gattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccaccaaaaa 53823618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 19673070 - 19672982
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatca 103  Q
    |||||||| | || |||||| ||||||| ||||||| |||||| |  ||||||||||||||||| |||  ||||||||||| | ||||||    
T  19673070 cagagaaatatcatatcaagccaaacaa-gattgcagctagacactgactcccgatctcgaagcaaaagtaaccggcccactggaaatca 19672982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 25753141 - 25753045
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| |||| |||| | ||||||| ||||||| |||||| || ||||||||||||||||| |||| || | ||||| || ||| ||||| ||||    
T  25753141 cagagaaacaccacatcacgccaaacaa-gattgcagctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccagcaaacaa 25753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 28966812 - 28966763
Alignment:
Q  46 tgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccacc 95  Q
    |||| |||||| |||||| |||||||||||||||||  ||||||||||||    
T  28966812 tgcagctagacgccaacttccgatctcgaagccaaagtaaccggcccacc 28966763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 21988057 - 21988137
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagac 121  Q
    |||| |||| |||||| |||||||| ||||||||| | |||  ||||||||||||  || ||||||||||| | |||||||    
T  21988057 aagaatgcagctagacaccaactcctgatctcgaaacaaaagtaaccggcccaccagaattcagcacacaaaaagtaagac 21988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 20611752 - 20611578
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  20611752 cagagaaaaaccaaatcaagtcaaacaaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaaccagcacacaata 20611653  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  20611652 tgtaagacgaaaaacatagcatgcgaagtttgaacaataaacaaatcaaaaggaaaaggctcaacacaacgtgac 20611578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 47235683 - 47235511
Alignment:
Q  16 gagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatg 115  Q
    ||||||||||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  47235683 gagaaaaaccaaaccaagtcaaacaaagattgcagctagaccctgactcccgatctcgaagccaaatgaaccggcccatcgaaaaccagcacacattatg 47235584  T
Q  116 taagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  47235583 taagacgaaagacatggcgtgcgaagtttaaacaacaaacaaatcaaaaggaaaaggctcaacacaacgtgac 47235511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 2394365 - 2394539
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  2394365 cagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaata 2394464  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||||||||||||||| |||||||||| || ||||||||||| |||| || ||| |||| |||| ||||||    
T  2394465 tgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccacagcgtgac 2394539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 14 - 188
Target Start/End: Original strand, 34475866 - 34476039
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||| |||| ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||| |||||||| |||    
T  34475866 cagagaaaaatcaaaccaagtcaaacaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacacgata 34475965  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||  ||| |||||||||||| ||||||||||    
T  34475966 tgtaagacaaaagacaaggcatgcgaagtttaaacaacaaacaaatccaaaggaaaaggctcaa-acaacgtgac 34476039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 45163817 - 45163644
Alignment:
Q  15 agagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatat 114  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||| | | |||| |||||||||||||    
T  45163817 agagaaaaatcaaaccaagtcaaacaaagattgcagctagaccccgacttccgatcttgaagccaaatgaaccggcctatcaaaaaccagcacacaatat 45163718  T
Q  115 gtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    ||||||||||||||||||| |||||||||| || |||||||||||||||| || ||| ||||||||| ||||||    
T  45163717 gtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaataaaaaggacaagactcaacacagcgtgac 45163644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 2392618 - 2392785
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||| ||||||||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |||| |||||| ||||||||||||    
T  2392618 cagagtaaaaccaaaccaagtcaaacaaagattgcagctagaccccgactcccgatcttgaagccaaatgaaccgtcccatcgaaaaccagcacacaata 2392717  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacaca 181  Q
    |||||||||||||||||||| |||||||||| || ||||||||||| |||| || ||| |||| ||||    
T  2392718 tgtaagacgaaagacatggcgtgcgaagtttaaataacaaacaaatcaaaaggacaagactcaccaca 2392785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 19176472 - 19176304
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  19176472 cagagaaaaaccaaattaagtcaaacaaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaaccagcacacaata 19176373  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaa 182  Q
     |||||| ||||||||||||||| ||||||| | |||||||||||| | || ||||| |||| ||||||    
T  19176372 agtaagaggaaagacatggcatgtgaagtttaaccaacaaacaaatcacaaggaaaaagctccacacaa 19176304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 23328470 - 23328567
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacg 122  Q
    |||| ||||||||||||||| |||||| |||||| |||||||||||||||||||| |||  |||||||||| || | | |||||||||||||||||||||    
T  23328470 accatatcaagtcaaacaaa-attgcagctagacaccaactcccgatctcgaagcaaaa--aaccggcccatcggacaccagcacacaatatgtaagacg 23328566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 4464047 - 4464132
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaa 100  Q
    |||||||| ||||||||| | || |||| |||||||||||||| || ||||||||||||||||| |||  |||||||||||||||||    
T  4464047 cagagaaacaccaaatcacgccacacaa-gattgcaactagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaa 4464132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 40023691 - 40023799
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacg 122  Q
    |||| |||||||||||  | ||||||| |||||| |||||| ||||||||||||| |||  |||||| |||||| | | ||  |||||||||||||||||    
T  40023691 accatatcaagtcaaaacatgattgcagctagacaccaacttccgatctcgaagcaaaaataaccggtccaccggacaccaatacacaatatgtaagacg 40023790  T
Q  123 aaagacatg 131  Q
    | |||||||    
T  40023791 atagacatg 40023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 14755401 - 14755471
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    ||||||||| |||||  || ||||||||||||||||| |||  |||||||||| || ||||||||||||||    
T  14755401 aagattgcagctagataccgactcccgatctcgaagcaaaagtaaccggcccatcggaaatcagcacacaa 14755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 823547 - 823627
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccacc 95  Q
    |||||||| |||| | |||| ||||||| |||||||||||||| |||||||| ||||| ||||| |||| |||||| |||||    
T  823547 cagagaaacaccataacaagccaaacaa-gattgcaactagacaccaactcctgatcttgaagcaaaattaaccggtccacc 823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 37123351 - 37123289
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagc 77  Q
    |||||||| ||||||||| | |||||||| |||||| |||||| || |||||||||||||||||    
T  37123351 cagagaaacaccaaatcacgccaaacaaa-attgcagctagacaccgactcccgatctcgaagc 37123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 1e-61; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 3117462 - 3117288
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaa-caaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaat 112  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| || ||||||||    
T  3117462 cagagaaaaaccaaatcaagtcaaaacaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaaaaccaacacacaat 3117363  T
Q  113 atgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacgtgac 188  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||| |||||    
T  3117362 atgtaagatgaaagacatggcatgcaaagattgaacaacaaacaaata-aaaagaaaaagctcaacacaatgtgac 3117288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 16510413 - 16510575
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||  |||||||||| ||||||        || ||    
T  16510413 cagagaaaaaccatatcaagtcaaacaaagattgcagctagaccccgactcccgatctcgaagcaaaagtaaccggcccaacgaaaa-------ccatta 16510505  T
Q  114 tgtaagacgaaagacatggcatgcgaagtttgaacaacaaacaaataaaaaagaaaaggctcaacacaacg 184  Q
    |||||||| ||||||||||||||||||| |  |||||||||||||| |||| |||||||||||||||||||    
T  16510506 tgtaagacaaaagacatggcatgcgaag-taaaacaacaaacaaatcaaaaggaaaaggctcaacacaacg 16510575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 15132643 - 15132732
Alignment:
Q  23 accaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaata 113  Q
    |||| |||||||||||||  ||||||| |||| | || ||||||||||||||||| |||  ||||||||||||||||| || |||||||||    
T  15132643 accatatcaagtcaaacag-gattgcagctagtcaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaata 15132732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 32935477 - 32935556
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaaga 120  Q
    ||||||||| |||||| |||||| | |||||| |||| |||  ||||| ||||||| ||  |||||||||||||||||||    
T  32935477 aagattgcagctagacaccaacttctgatctcaaagcaaaagtaaccgacccaccggaatccagcacacaatatgtaaga 32935556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 3880695 - 3880791
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| ||||||||| | ||||||| ||| ||| |||||| || |||||||||||| |||| |||  ||| ||||||||| ||| ||||| ||||    
T  3880695 cagagaaacaccaaatcatgccaaacaa-gatagcagctagacaccgactcccgatctcaaagcaaaagtaactggcccaccggaaaccagcaaacaa 3880791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 15943957 - 15943908
Alignment:
Q  46 tgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccacc 95  Q
    ||||| ||||| |||||||||||||| ||||| |||| ||||||||||||    
T  15943957 tgcaattagactccaactcccgatcttgaagcaaaattaaccggcccacc 15943908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 20701915 - 20702011
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||||||||||||| | ||||||||  ||||| |||||| || | |||||||||| |||| |||  |||||||||| || ||| || |||||||    
T  20701915 cagagaaaaaccaaatcacgccaaacaaa-tttgcagctagacaccgaatcccgatctcaaagcaaaagtaaccggcccatcggaaaccatcacacaa 20702011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 1154 - 1244
Alignment:
Q  41 aagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaatatgtaagacgaaagacatg 131  Q
    ||||||||| |||||| ||||||||| |||||||||| |||  || ||||||||   ||  |||||||||||||||||||| || ||||||    
T  1154 aagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaaacgacatg 1244  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 58096 - 58000
Alignment:
Q  14 cagagaaaaaccaaatcaagtcaaacaaagattgcaactagaccccaactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 111  Q
    |||||||| ||||||||| | ||||||| ||||||| ||||||  | ||||||||||||||||| |||  |||||||| |  | ||||||||||||||    
T  58096 cagagaaacaccaaatcacgccaaacaa-gattgcagctagacaacgactcccgatctcgaagcaaaagtaaccggcctaatggaaatcagcacacaa 58000  T

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