View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17064_low_5 (Length: 475)
Name: NF17064_low_5
Description: NF17064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17064_low_5 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 363; Significance: 0; HSPs: 33)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 18 - 462
Target Start/End: Complemental strand, 4482405 - 4481964
Alignment:
| Q |
18 |
gactccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatac |
117 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4482405 |
gactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataacctttgtcaacaccgaatac |
4482306 |
T |
|
| Q |
118 |
aatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaag |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4482305 |
aatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaattgaag |
4482206 |
T |
|
| Q |
218 |
gtgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatga |
317 |
Q |
| |
|
|||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||| ||||||| |
|
|
| T |
4482205 |
gtga---tgatgaagtaagtcaagacttattctctcttactcaatcaatcatgacgaactttcgccacttctttgatgaatttctggctaaacttcatga |
4482109 |
T |
|
| Q |
318 |
atcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatc |
417 |
Q |
| |
|
|||| ||| ||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4482108 |
atctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatt |
4482009 |
T |
|
| Q |
418 |
gttctcttttccccggtcagtgcatgttacttactctctacttct |
462 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4482008 |
gttctcttttccccggtcagtgcatgttacttactctctacttct |
4481964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 431
Target Start/End: Complemental strand, 4575994 - 4575585
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaataca |
118 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
4575994 |
actccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataacctttgttaacactgaataca |
4575895 |
T |
|
| Q |
119 |
atcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaagg |
218 |
Q |
| |
|
|||||||||||||||| |||||||| ||| ||| |||||||||||||||||||| |||| |||||| || |||||||||||||||||||||| ||| || |
|
|
| T |
4575894 |
atcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatgg |
4575795 |
T |
|
| Q |
219 |
tgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaa |
318 |
Q |
| |
|
| |||| |||||| ||||||||| || ||||||| | |||||||||| |||||||||||| | |||||||||||||||||||||||| |||| || |
|
|
| T |
4575794 |
taatgg---tgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttcgccacttctttgatgaacttcttgctaaacttcaagac |
4575698 |
T |
|
| Q |
319 |
tcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcg |
418 |
Q |
| |
|
||| ||| ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | |
|
|
| T |
4575697 |
tctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgctgaagaacatgccctcccaattg |
4575598 |
T |
|
| Q |
419 |
ttctcttttcccc |
431 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
4575597 |
ttcttttttcccc |
4575585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 19 - 431
Target Start/End: Complemental strand, 4562201 - 4561792
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataa-cctttgtcaacaccgaatac |
117 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||| ||||||| ||||| |||||| |
|
|
| T |
4562201 |
actccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaacctttgttaacactgaatac |
4562102 |
T |
|
| Q |
118 |
aatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaag |
217 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||| |||| |||||| || |||||||||||||||||||||| ||| | |
|
|
| T |
4562101 |
aatcacaaacgtttgctaaa-tcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagatggtttaactccaaaggatg |
4562003 |
T |
|
| Q |
218 |
gtgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatga |
317 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||| | |||||||||| |||||||||| | | |||||||||||||||||||||||| |||| || |
|
|
| T |
4562002 |
gtgatggtgata---ttagtcaagacctacactctcttggtgaatcaatcataacgaactttcaccacttctttgatgaacttcttgctaaacttcaaga |
4561906 |
T |
|
| Q |
318 |
atcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatc |
417 |
Q |
| |
|
||| ||| ||||||| ||||||| ||||| || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | |
|
|
| T |
4561905 |
ctctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagctgctgctgaagaacatgcactcccagtt |
4561806 |
T |
|
| Q |
418 |
gttctcttttcccc |
431 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
4561805 |
gttcttttttcccc |
4561792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 22 - 431
Target Start/End: Original strand, 4488789 - 4489195
Alignment:
| Q |
22 |
ccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatc |
121 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||| |||||||||| |
|
|
| T |
4488789 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacctttgtcaacactgaatacaatc |
4488888 |
T |
|
| Q |
122 |
acaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtga |
221 |
Q |
| |
|
||||||| ||||| |||||||| |||||||| |||||||||||||| |||||||||| |||||| || || ||||||||||||||||||| || ||||| |
|
|
| T |
4488889 |
acaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatggtttaactccaacagatggtga |
4488988 |
T |
|
| Q |
222 |
tggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatct |
321 |
Q |
| |
|
||| |||||||||||||| ||| | ||||| || ||||||||||| || |||| | | ||||||| || | ||||||||||| || |||| ||| |
|
|
| T |
4488989 |
tgg---cgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtatttcttgctaaacttaatgactct |
4489085 |
T |
|
| Q |
322 |
tccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgttc |
421 |
Q |
| |
|
| | ||||||| |||||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
4489086 |
gctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgcactcccaattgttc |
4489185 |
T |
|
| Q |
422 |
tcttttcccc |
431 |
Q |
| |
|
|||||||||| |
|
|
| T |
4489186 |
tcttttcccc |
4489195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 445
Target Start/End: Complemental strand, 3173542 - 3173119
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaataca |
118 |
Q |
| |
|
||||||| ||||| |||||| ||||||||||||||||||||| ||| |||||| |||||| |||||||||| |||||||||||||| ||||| ||||||| |
|
|
| T |
3173542 |
actccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttgtaaacactgaataca |
3173443 |
T |
|
| Q |
119 |
atcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaagg |
218 |
Q |
| |
|
|||||||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||||| |||||| || |||||||||||||||||| |||||||||| |
|
|
| T |
3173442 |
atcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggtttaacttcaatggaagg |
3173343 |
T |
|
| Q |
219 |
tgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaa |
318 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||| || ||||||||| | |||||||| || ||| ||||||| |||||||| |||| || |
|
|
| T |
3173342 |
tgatggt---gatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgctaaacttcacgat |
3173246 |
T |
|
| Q |
319 |
tcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcg |
418 |
Q |
| |
|
||| | | ||||||| |||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||| ||| ||||||||||| |||||||| | |
|
|
| T |
3173245 |
tctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacatgctctcccaattg |
3173146 |
T |
|
| Q |
419 |
ttctcttttccccggtcagtgcatgtt |
445 |
Q |
| |
|
|||| ||||| ||| |||||||||| |
|
|
| T |
3173145 |
ttctattttcgccgtgtagtgcatgtt |
3173119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 80 - 431
Target Start/End: Original strand, 4502943 - 4503291
Alignment:
| Q |
80 |
ttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttac |
179 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
180 |
ctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaacttt |
279 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||| || |||||||| || ||| ||| |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatgg---tgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaatttt |
4503139 |
T |
|
| Q |
280 |
cgctatttctttgatgaacttcttgctaaaattcatgaatcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccat |
379 |
Q |
| |
|
| | | ||||||| |||| |||||| |||| || |||| ||| ||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
4503140 |
caccaattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccat |
4503239 |
T |
|
| Q |
380 |
ttacagtagatgctgccgaagaacatgcactcccaatcgttctcttttcccc |
431 |
Q |
| |
|
|| ||||| ||||||| ||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
4503240 |
ttccagtatatgctgctgaagaacatacactcccaattgttctcgtttcccc |
4503291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 33 - 428
Target Start/End: Original strand, 4265660 - 4266052
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4265660 |
tcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatcacaaacgcttg |
4265759 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| |||||||| |||||||| | |||||||||||| ||| |||| ||||| || |||||||||||| |||||||||||||||| ||||||||| | |
|
|
| T |
4265760 |
ctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatggtctaactccaatggaaggcaatggtgatgct- |
4265858 |
T |
|
| Q |
233 |
ttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatcttccagtgctgg |
332 |
Q |
| |
|
| ||||||| ||| | ||||| |||||||||||||||||||| | | |||||||||||||||| ||| | ||||| ||||| ||| || ||| |
|
|
| T |
4265859 |
--actcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatgg |
4265956 |
T |
|
| Q |
333 |
tattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgttctcttttc |
428 |
Q |
| |
|
| |||| || ||| |||| ||||| ||||| ||||| |||||||| |||||| |||||||||| ||||||||||||||||||||| || ||||||| |
|
|
| T |
4265957 |
ttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttc |
4266052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 21 - 463
Target Start/End: Complemental strand, 4471451 - 4471015
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||| ||| ||| || ||||||||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
4471451 |
tccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacgtttgtcaacactgaatacaat |
4471352 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||| ||||| || ||||| ||||| | | |||||||||||||||| |||| |||||| || || ||| ||||||| ||| |||||||| ||| |
|
|
| T |
4471351 |
cacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatggttttactgcaatggaaagtg |
4471252 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
|| || ||| ||||||| || ||| || || ||||||||||||| |||| | | ||||| |||||||||| ||| | || ||| || |
|
|
| T |
4471251 |
gtg------atcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaaccctttggtgaacttcttactagacttgatgcctc |
4471158 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgtt |
420 |
Q |
| |
|
| ||| ||||||| |||||||||||||||| ||| || |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
4471157 |
tgccactgctggtcttatccctccagttacttgcataatttctgattgttacatgccatttacagtagatgctgctgaagaacgtgcactcccaatcgtt |
4471058 |
T |
|
| Q |
421 |
ctcttttccccggtcagtgcatgttacttactctctacttctc |
463 |
Q |
| |
|
|||||||| |||||||| ||||||| || |||| ||||||||| |
|
|
| T |
4471057 |
ctcttttctccggtcagcgcatgttgctcactcactacttctc |
4471015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 27 - 431
Target Start/End: Complemental strand, 4623838 - 4623437
Alignment:
| Q |
27 |
tccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaa |
126 |
Q |
| |
|
||||| |||||||||||||||| ||||||| ||| ||| ||| || ||| |||||| |||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
4623838 |
tccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataacctttggtcacaccgaatacaatcacaaa |
4623739 |
T |
|
| Q |
127 |
cgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtg |
226 |
Q |
| |
|
|| ||||| |||||||| |||||||| ||||||||||||||||| || |||| |||||| || || |||||||||||||| |||||||||||||||||| |
|
|
| T |
4623738 |
cgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagatggtttaacaccaatggaaggtgatggt- |
4623640 |
T |
|
| Q |
227 |
atgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgct-atttctttgatgaacttcttgctaaaattcatgaatcttcca |
325 |
Q |
| |
|
||||||||||||||| || ||||||| || | ||||| | || ||| |||| | || |||| |||||||||||| ||| ||||||| ||| ||| |
|
|
| T |
4623639 |
--gatgttagtcaagacataccctctctttctgattcaataaggaagaa-tttctatcatcccttttgtgaacttcttgcaaaacttcatgactctgcca |
4623543 |
T |
|
| Q |
326 |
gtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgttctctt |
425 |
Q |
| |
|
||||||| || | || |||||||| ||||||||||| ||||| |||||| |||||||| || | ||||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
4623542 |
ctgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagagcatgcactcccaattgttttctt |
4623443 |
T |
|
| Q |
426 |
ttcccc |
431 |
Q |
| |
|
||||| |
|
|
| T |
4623442 |
ctcccc |
4623437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 19 - 229
Target Start/End: Complemental strand, 4517879 - 4517669
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaataca |
118 |
Q |
| |
|
||||||| |||| |||||| ||||||||| | ||||| ||| ||| |||||| ||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4517879 |
actccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacctttgtcaacaccgaataca |
4517780 |
T |
|
| Q |
119 |
atcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaagg |
218 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| || ||||| |
|
|
| T |
4517779 |
atcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgatagaagg |
4517680 |
T |
|
| Q |
219 |
tgatggtgatg |
229 |
Q |
| |
|
|||||||||| |
|
|
| T |
4517679 |
cgatggtgatg |
4517669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 21 - 428
Target Start/End: Complemental strand, 4627687 - 4627283
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
|||||||||| |||||| ||||||||| ||||||||| | ||| |||| | ||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
4627687 |
tccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacctttgtcaacactgaatacaat |
4627588 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||||||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||| ||| | ||||||| |
|
|
| T |
4627587 |
cacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatggtttaacaccactagaaggtg |
4627488 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
|||| ||||||| ||||||| || |||||| | |||||||| | | |||||| | | ||||| |||||||||||||||| ||||||| || |
|
|
| T |
4627487 |
atgg---cgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaacttcttgctaaacttcatgactc |
4627391 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgtt |
420 |
Q |
| |
|
||| ||||||| || | | |||||||| ||||||||||| ||||| | ||| ||||||| || | ||||| |||||||||||||||||||| | | |
|
|
| T |
4627390 |
agccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctgaagaacatgcactcccaattgct |
4627291 |
T |
|
| Q |
421 |
ctcttttc |
428 |
Q |
| |
|
|||||||| |
|
|
| T |
4627290 |
ctcttttc |
4627283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 4507448 - 4507240
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||| ||||||| ||||||||| ||||||| ||| ||| || || ||||||||| ||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
4507448 |
tccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgaggctttcacataacctttgttaacaccgaatacaat |
4507349 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||| ||||| |||||||| ||| ||| ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |||| |
|
|
| T |
4507348 |
cacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggtttaactccaatggatggtg |
4507249 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
4507248 |
atggtgatg |
4507240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 228
Target Start/End: Complemental strand, 4569609 - 4569404
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaataca |
118 |
Q |
| |
|
||||||| |||| |||||| ||||||||| |||| |||||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4569609 |
actccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa---- |
4569514 |
T |
|
| Q |
119 |
atcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaagg |
218 |
Q |
| |
|
||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| | ||||| |
|
|
| T |
4569513 |
atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaagg |
4569414 |
T |
|
| Q |
219 |
tgatggtgat |
228 |
Q |
| |
|
| |||||||| |
|
|
| T |
4569413 |
ttatggtgat |
4569404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 33 - 263
Target Start/End: Complemental strand, 4594535 - 4594308
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| | | |||||| |||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
4594535 |
tcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaacgtttg |
4594436 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||||||||| ||| ||||| ||||||||| |||||||||||| |||| |||||||||||||||||| |||| |
|
|
| T |
4594435 |
ctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggt---gatg |
4594339 |
T |
|
| Q |
233 |
ttagtcaagacttattctctcttactcaatc |
263 |
Q |
| |
|
||||||||||| || ||||||| ||||||| |
|
|
| T |
4594338 |
ttagtcaagacataccctctcttgctcaatc |
4594308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 4618838 - 4618630
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| ||||| |||||| ||||||||| ||||||| ||| ||| ||| || ||||||||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
4618838 |
tccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaat |
4618739 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| || |||||||||||||| || |||| |||||| | || |||||||||||||| ||||||||||||| |
|
|
| T |
4618738 |
cacaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggtttaacaccaatggaaggtg |
4618639 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
4618638 |
atggtgatg |
4618630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 21 - 463
Target Start/End: Complemental strand, 4462744 - 4462308
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||| | ||||| ||||||||||||||||||||| |||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||| |
|
|
| T |
4462744 |
tccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacctttgtcaacactgaatacaat |
4462645 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
||||| | ||||| || ||||| ||||| || | | |||||||||||||| |||| |||||| || || ||| ||||||| || |||||||| || |
|
|
| T |
4462644 |
cacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatggttttacaacaatggaaactg |
4462545 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
|| ||||| ||||||| || || || |||||||||||||| |||||| | |||| |||||||||| | | | || ||| || |
|
|
| T |
4462544 |
gtg------atgtttttcaagacgtacacttattttttcaatcaatcatgatgaacttcattcaaccctttagtgaacttcttacaagacttgatgcctc |
4462451 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgtt |
420 |
Q |
| |
|
| ||| ||| | | |||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| ||||| || ||| ||| |||||||||||||||| |
|
|
| T |
4462450 |
tgccactgccgatcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtgcactcccaatcgtt |
4462351 |
T |
|
| Q |
421 |
ctcttttccccggtcagtgcatgttacttactctctacttctc |
463 |
Q |
| |
|
||||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
4462350 |
ctcttttccccggtcagtgcatgttgctcactcactacttctc |
4462308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 33 - 245
Target Start/End: Original strand, 4513582 - 4513794
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||| ||||||||| || |||| | | ||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4513582 |
tcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttgttaacaccgaatacaatcacaaacgtttg |
4513681 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| |||||||| ||||| || || |||||||||||||| |||||| |||||| || || || |||||||||||||||||||| || ||||||| ||||| |
|
|
| T |
4513682 |
ctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggtttaactccaatggatggcgatggtggtgatg |
4513781 |
T |
|
| Q |
233 |
ttagtcaagactt |
245 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
4513782 |
ctactcaagactt |
4513794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 4558662 - 4558454
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| ||||| |||||| ||||||||| ||||||||||| ||| |||||| |||||||||||||| || |||||||||| ||| ||||| |||||||| |
|
|
| T |
4558662 |
tccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataacctatgtaaacactgaatacaac |
4558563 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||| |||||| || || || |||||||||||||||| ||| |||| |
|
|
| T |
4558562 |
cacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggatggtttaactccaacggatggtg |
4558463 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
|||| |||| |
|
|
| T |
4558462 |
atggcgatg |
4558454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 4581499 - 4581343
Alignment:
| Q |
73 |
cttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactg |
172 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||| | |
|
|
| T |
4581499 |
cttcaccttagaggctttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccg |
4581400 |
T |
|
| Q |
173 |
attttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatg |
229 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||| || ||||| ||| |||||| |
|
|
| T |
4581399 |
attttacctttgagactattccagatggtttaactccgatagaaggcgatagtgatg |
4581343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 21 - 243
Target Start/End: Original strand, 4612309 - 4612534
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| ||||| |||||| ||||||||| |||| | ||| ||| |||||| ||||||||||||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
4612309 |
tccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcgtcaacaccgaatacaat |
4612408 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||||||||| | |||||||||||| || || ||| ||||| | |
|
|
| T |
4612409 |
cacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggtctaccttcaaacgaaggcg |
4612508 |
T |
|
| Q |
221 |
atggtga---tgatgttagtcaagac |
243 |
Q |
| |
|
||||||| |||||||||||||||| |
|
|
| T |
4612509 |
atggtgatggtgatgttagtcaagac |
4612534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 21 - 425
Target Start/End: Original strand, 4258767 - 4259168
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||| ||| ||| || || |||||| ||| ||| || |||||||||||||||||||| ||||| ||| |
|
|
| T |
4258767 |
tccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataacctttgtcaacactgaatataat |
4258866 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||||||||| |||||||| ||| ||| ||| |||||||||||| ||||||||||||||| || || | ||||||| | |||||| ||||||||| |
|
|
| T |
4258867 |
cacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagatggtctgactccagtggaaggtg |
4258966 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
|||| ||||||| ||||||| || ||| ||| ||||||| || | | |||||| | | ||||| |||||||||||||||| |||| || || |
|
|
| T |
4258967 |
atgg---cgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttcttgctaaacttcaagactc |
4259063 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgtt |
420 |
Q |
| |
|
||| | |||||||| | || || ||||| ||||||||||||||||| |||||| |||||| || | ||||| ||||| |||||||||||||| ||| |
|
|
| T |
4259064 |
agccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctgaagagcatgcactcccaattgtt |
4259163 |
T |
|
| Q |
421 |
ctctt |
425 |
Q |
| |
|
|||| |
|
|
| T |
4259164 |
ttctt |
4259168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 4587168 - 4586961
Alignment:
| Q |
22 |
ccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatc |
121 |
Q |
| |
|
|||| ||||| |||||| ||||||||| ||||||||||| ||| ||||| ||||||||| |||| || |||||||||||||| ||||| |||||||||| |
|
|
| T |
4587168 |
ccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaaacactgaatacaatc |
4587069 |
T |
|
| Q |
122 |
acaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtga |
221 |
Q |
| |
|
||||||| ||||| || ||||| | |||||| |||||||||| ||| |||||||||| |||||| || || ||||||||||||||||||| ||| ||||| |
|
|
| T |
4587068 |
acaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaactccaacggatggtga |
4586969 |
T |
|
| Q |
222 |
tggtgatg |
229 |
Q |
| |
|
|||||||| |
|
|
| T |
4586968 |
tggtgatg |
4586961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 33 - 242
Target Start/End: Complemental strand, 4603635 - 4603429
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||| ||||||||| || |||||||| ||| |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4603635 |
tcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
4603536 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| |||||||| ||||| || ||||| || || ||||||||||||| ||||||||| || |||||||| |||| || ||||||||||| |||| ||| |
|
|
| T |
4603535 |
ctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttgaaacaatcccagatggactaacaccgatggaaggtga---tgataatg |
4603439 |
T |
|
| Q |
233 |
ttagtcaaga |
242 |
Q |
| |
|
|||||||||| |
|
|
| T |
4603438 |
ttagtcaaga |
4603429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 33 - 229
Target Start/End: Complemental strand, 4565554 - 4565358
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||| ||||| ||| ||||||| ||| | | |||||| |||||||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||| |
|
|
| T |
4565554 |
tcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttgtcaacactgaatacaatcataaacgattg |
4565455 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatg |
229 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||||| | || |||| ||||||||| |||||||||||| |||| || || |||||||||||||||| |
|
|
| T |
4565454 |
ctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtctaacaccgatagaaggtgatggtgatg |
4565358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 4572502 - 4572295
Alignment:
| Q |
22 |
ccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatc |
121 |
Q |
| |
|
|||| ||||| |||||| ||||||||| |||||||| || ||| |||| | |||||||||||||| || |||||||||| ||| ||||| |||||||||| |
|
|
| T |
4572502 |
ccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataacctatgtaaacactgaatacaatc |
4572403 |
T |
|
| Q |
122 |
acaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtga |
221 |
Q |
| |
|
||||||| ||||| || ||||| |||| ||| ||||||||||||||||| |||||| |||||| | || |||||||||||| |||||| ||| || || |
|
|
| T |
4572402 |
acaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagatggtttatctccaacggatggcga |
4572303 |
T |
|
| Q |
222 |
tggtgatg |
229 |
Q |
| |
|
||| |||| |
|
|
| T |
4572302 |
tggcgatg |
4572295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 104 - 427
Target Start/End: Original strand, 4298172 - 4298492
Alignment:
| Q |
104 |
tcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggttt |
203 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| | |||| |||||| || || ||||||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
204 |
aactccaatggaaggtgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttctt |
303 |
Q |
| |
|
||||||| |||||||||||| ||||||| ||||||| || |||||| | |||||||||| | |||||| | | ||||| |||||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatgg---agatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttctt |
4298368 |
T |
|
| Q |
304 |
gctaaaattcatgaatcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaac |
403 |
Q |
| |
|
|||||| ||| ||| ||| ||| ||||||| || | || |||||||| ||||||||| |||||| | ||| ||||||| || | ||||| ||||||| |
|
|
| T |
4298369 |
gctaaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaac |
4298468 |
T |
|
| Q |
404 |
atgcactcccaatcgttctctttt |
427 |
Q |
| |
|
||||||||||||| ||||||||| |
|
|
| T |
4298469 |
atgcactcccaattattctctttt |
4298492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 73 - 229
Target Start/End: Complemental strand, 4599648 - 4599492
Alignment:
| Q |
73 |
cttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactg |
172 |
Q |
| |
|
|||||||||||||| || |||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||||| || | | |||||||||||| |
|
|
| T |
4599648 |
cttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactg |
4599549 |
T |
|
| Q |
173 |
attttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatg |
229 |
Q |
| |
|
||||| |||| || || || |||||||||||||||||||| || ||||||||||||| |
|
|
| T |
4599548 |
atttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatg |
4599492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 4255478 - 4255550
Alignment:
| Q |
99 |
ctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcact |
171 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||| |
|
|
| T |
4255478 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggttccact |
4255550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 431
Target Start/End: Original strand, 4255551 - 4255637
Alignment:
| Q |
345 |
agttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgttctcttttcccc |
431 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| ||||||| || | ||||| ||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
4255551 |
agttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttctcctttcccc |
4255637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 4497834 - 4497899
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttaga |
84 |
Q |
| |
|
|||||||||||| | |||| ||||||||| ||||||||||| |||||||| | |||||||||||| |
|
|
| T |
4497834 |
actccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 4493442 - 4493403
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaa |
60 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
4493442 |
tccatttccagctcaaggtcatatcaatgcaatgctgaaa |
4493403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 4599429 - 4599364
Alignment:
| Q |
295 |
gaacttcttgctaaaattcatgaatcttccagtgctggtattatccctccagttacctgcttagtt |
360 |
Q |
| |
|
||||||||||||| | | |||| ||||| | ||||||| |||||||||||||||| ||||||||| |
|
|
| T |
4599429 |
gaacttcttgctagactctatgagtcttctactgctggtcttatccctccagttacttgcttagtt |
4599364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 366
Target Start/End: Complemental strand, 4581281 - 4581209
Alignment:
| Q |
294 |
tgaacttcttgctaaaattcatgaatcttccagtgctggtattatccctccagttacctgcttagtttctgat |
366 |
Q |
| |
|
|||||||||||||| | || |||| ||| ||| | ||||| || ||||||||||||| ||| ||||||||||| |
|
|
| T |
4581281 |
tgaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
4581209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 133; Significance: 6e-69; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 33 - 416
Target Start/End: Complemental strand, 24104620 - 24104236
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| ||| |
|
|
| T |
24104620 |
tcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaacgcttg |
24104521 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| ||||||| | ||| || | |||||||||||| ||| |||| |||||| || |||||||||||| |||||||||||||||| |||| ||||| |
|
|
| T |
24104520 |
ctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatggtctaactccaatggaaggcaatgg---tgatg |
24104424 |
T |
|
| Q |
233 |
ttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatcttccagtgctgg |
332 |
Q |
| |
|
||| ||||||| ||| | ||||| |||||||||||||||||||| | | |||||||||||||||| ||| | ||||| ||||| ||| || ||| |
|
|
| T |
24104423 |
ttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttgatgaacttcttactagacttcatcaatctgccaatgatgg |
24104324 |
T |
|
| Q |
333 |
tattatccctccagttacctgcttagtttctgattgctacatgccatttacag----tagatgctgccgaagaacatgcactcccaat |
416 |
Q |
| |
|
| |||| || ||| |||| ||||||||||| ||||| |||||||||||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
24104323 |
tgttattccaccaattacttgcttagtttcggattgttacatgccatttacagttgatcgatgctgttgaagaacatgcactcccaat |
24104236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 422
Target Start/End: Original strand, 2042 - 2443
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| ||||| |||||| ||||||||| ||||||| ||| ||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
2042 |
tccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaat |
2141 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|| ||||| ||||| |||||||| ||||| || || ||||||||||| |||||||| ||| || || || || ||||||||||||||| |||||| || |
|
|
| T |
2142 |
cataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatg |
2241 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
||| || | |||||||||||||| || |||||||| | ||||||||| | ||||| | | |||||| ||||||||||||| | || | || || |
|
|
| T |
2242 |
atgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtc |
2341 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgtt |
420 |
Q |
| |
|
| ||| | ||||| ||||||||||||| || |||||||||||||||| |||||| ||||||| || | ||||| |||||| |||||||||||||| || |
|
|
| T |
2342 |
tgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatacaagctgctgaagaatatgcactcccaatcctt |
2441 |
T |
|
| Q |
421 |
ct |
422 |
Q |
| |
|
|| |
|
|
| T |
2442 |
ct |
2443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 381
Target Start/End: Complemental strand, 2361 - 2001
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| ||||| |||||| ||||||||| |||| || ||| ||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
2361 |
tccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaat |
2262 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|| ||||| ||||| |||||||| ||||| || || ||||||||||| |||||||| ||| || || || || ||||||||||||||| |||||| || |
|
|
| T |
2261 |
cataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatg |
2162 |
T |
|
| Q |
221 |
atggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatc |
320 |
Q |
| |
|
||| || | |||||||||||||| || |||||||| | ||||||||| | ||||| | | |||||| ||||||||||||| | || | || || |
|
|
| T |
2161 |
atgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtc |
2062 |
T |
|
| Q |
321 |
ttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccattt |
381 |
Q |
| |
|
| ||| | ||||| ||||||||||||| || |||||||||||||||| |||||| ||||| |
|
|
| T |
2061 |
tgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcattt |
2001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 1295 - 1087
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||| ||| ||| |||||| ||||||||||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
1295 |
tccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgtcaacactgaatacaat |
1196 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||| ||||||||| || ||||||||| |||| ||| | ||||||| |
|
|
| T |
1195 |
cacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtctaacaccactagaaggtg |
1096 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
1095 |
atggtgatg |
1087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 1676058 - 1675850
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||| ||| ||| |||||| ||||||||||||||| || |||||| ||||||||| ||||||||| |
|
|
| T |
1676058 |
tccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgtcaacactgaatacaat |
1675959 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||| ||||||||| || ||||||||| |||| ||| | ||||||| |
|
|
| T |
1675958 |
cacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtctaacaccactagaaggtg |
1675859 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
1675858 |
atggtgatg |
1675850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 19 - 423
Target Start/End: Original strand, 20862399 - 20862794
Alignment:
| Q |
19 |
actccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaataca |
118 |
Q |
| |
|
||||||| |||| |||||||||||||||| || |||| ||| ||| |||||| ||||||||||||||||| ||||||| |||||||| || ||||||| |
|
|
| T |
20862399 |
actccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataacatttgtcaatactgaataca |
20862498 |
T |
|
| Q |
119 |
atcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaagg |
218 |
Q |
| |
|
|||||||||| ||||| || |||| |||||||| | ||||||||||||||||||| ||| |||||| || | |||||||||| |||| || |
|
|
| T |
20862499 |
atcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagatggttcaacttca-------- |
20862590 |
T |
|
| Q |
219 |
tgatggtgatgatgttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaa |
318 |
Q |
| |
|
||||||||||||||||||||||||| |||||| | ||| ||||| |||||||| | | ||| |||||||||||| ||| ||||||| |
|
|
| T |
20862591 |
-catggtgatgatgttagtcaagacttccaatctcttcgtgaattaatcagaacgaacttcatcgacagttttcgtgaacttcttgccaaacttcatgac |
20862689 |
T |
|
| Q |
319 |
tcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcg |
418 |
Q |
| |
|
||||||| ||||| |||| ||||| ||||| ||||||||||||||| | | |||| || |||| || | | ||| ||||||| |||||||||||| | |
|
|
| T |
20862690 |
tcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcagttaccatacaagttgctgaagaacttgcactcccaattg |
20862789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 105; Significance: 3e-52; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 229
Target Start/End: Complemental strand, 1282970 - 1282762
Alignment:
| Q |
21 |
tccatttccagctcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaat |
120 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||| ||| ||| |||||| ||||||||||||||||| ||||||||||||| || || ||||||||| |
|
|
| T |
1282970 |
tccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttgttaatactgaatacaat |
1282871 |
T |
|
| Q |
121 |
cacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtg |
220 |
Q |
| |
|
|||||||| ||||| |||||||| |||||||| ||| | ||||||||||||||||||| ||||||||| || ||||||||| |||| || | ||||||| |
|
|
| T |
1282870 |
cacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtctaacatcactagaaggtg |
1282771 |
T |
|
| Q |
221 |
atggtgatg |
229 |
Q |
| |
|
||||||||| |
|
|
| T |
1282770 |
atggtgatg |
1282762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 35776313 - 35776264
Alignment:
| Q |
91 |
cacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatc |
140 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
35776313 |
cacataacctttgtgaacactgaattcaaccacaaacgtttgataaaatc |
35776264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 35842120 - 35842071
Alignment:
| Q |
91 |
cacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatc |
140 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
35842120 |
cacataacctttgtgaacactgaattcaaccacaaacgtttgataaaatc |
35842071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 35854628 - 35854579
Alignment:
| Q |
91 |
cacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatc |
140 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
35854628 |
cacataacctttgtgaacactgaattcaaccacaaacgtttgataaaatc |
35854579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 35869237 - 35869188
Alignment:
| Q |
91 |
cacataacctttgtcaacaccgaatacaatcacaaacgtttgctaaaatc |
140 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| |||||||||||| ||||||| |
|
|
| T |
35869237 |
cacataacctttgtgaacactgaattcaaccacaaacgtttgataaaatc |
35869188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 33 - 449
Target Start/End: Complemental strand, 3088270 - 3087857
Alignment:
| Q |
33 |
tcaaggtcatatcaatgcattgttgaaaataggaaaactccttcaccttagaggcttgcacataacctttgtcaacaccgaatacaatcacaaacgtttg |
132 |
Q |
| |
|
|||||||||||| ||| ||||||| ||| ||| |||||| |||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
3088270 |
tcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataacctttgtcaataccgaatacaatcacaaccgtttg |
3088171 |
T |
|
| Q |
133 |
ctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagatggtttaactccaatggaaggtgatggtgatgatg |
232 |
Q |
| |
|
|| |||||||| ||| | || | |||||||||||||||||||| |||||| || || | ||||||| ||||||||||||||||| |||| ||||| |
|
|
| T |
3088170 |
cttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagatggtctaactccaatggaaggtaatgg---tgatg |
3088074 |
T |
|
| Q |
233 |
ttagtcaagacttattctctcttactcaatcaatcatgacgaactttcgctatttctttgatgaacttcttgctaaaattcatgaatcttccagtgctgg |
332 |
Q |
| |
|
||||||||||||| |||||| ||||||| | | |||||| | ||||| |||||||||| | ||||||||| ||| || |||||| |
|
|
| T |
3088073 |
ttagtcaagacttggcatctctttgtcaatcagttggaaagaacttcattcaaccctttggtgaacttcttcgtcgaattcatgactctgccgatgctgg |
3087974 |
T |
|
| Q |
333 |
tattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgctgccgaagaacatgcactcccaatcgttctcttttccccg |
432 |
Q |
| |
|
| |||| || |||||||| |||||||| |||||| |||||||||||||| || | | ||| ||||| |||||||||||||| |||||||||| || |
|
|
| T |
3087973 |
tcttattccaccagttacttgcttagtagctgatttttacatgccatttaccatacaagttgctgaagagaatgcactcccaatccttctcttttcacca |
3087874 |
T |
|
| Q |
433 |
gtcagtgcatgttactt |
449 |
Q |
| |
|
| |||||||||| |||| |
|
|
| T |
3087873 |
gccagtgcatgtaactt |
3087857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 445
Target Start/End: Original strand, 3382 - 3534
Alignment:
| Q |
293 |
atgaacttcttgctaaaattcatgaatcttccagtgctggtattatccctccagttacctgcttagtttctgattgctacatgccatttacagtagatgc |
392 |
Q |
| |
|
|||||||||||| |||| ||||||| ||| ||| ||||||| || | || | |||||| ||| |||| ||||||| |||||||||||||| || | || |
|
|
| T |
3382 |
atgaacttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagc |
3481 |
T |
|
| Q |
393 |
tgccgaagaacatgcactcccaatcgttctcttttccccggtcagtgcatgtt |
445 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||| | | ||||||||||| |
|
|
| T |
3482 |
tgctgaagaacatgcactcccaattgttctcttttccaccggcagtgcatgtt |
3534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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