View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17065_high_17 (Length: 247)
Name: NF17065_high_17
Description: NF17065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17065_high_17 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 40107203 - 40107432
Alignment:
| Q |
18 |
cttagttgctgttcagaaactaatgaaagctggttcagagtaggaaaagcgtggaaattgaagccttcgacgcaacccaagtaagttccgagagacgaaa |
117 |
Q |
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| T |
40107203 |
cttagttgctgttcagaaactaatgaaagctggttcagagtaggaaaagcgtggaaatcgaagccttcgacgcaacccaagtaagttccgagagacgaaa |
40107302 |
T |
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| Q |
118 |
cataatcaaccattttagtaattctactaatatgattattagaagaacacataaactgaatcaagcattcaaagggatcttgtctcaaaaccctagcacc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40107303 |
cataatcaaccattttagtaattctactaatatgattattagaagaacacataaactgaatcaagcattcaaagggatcttgtctcaaaaccctagcacc |
40107402 |
T |
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| Q |
218 |
actcaaatgttgtgctagttccgcaaatct |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
40107403 |
actcaaatgttgtgctagttccgcaaatct |
40107432 |
T |
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