View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17065_high_19 (Length: 240)
Name: NF17065_high_19
Description: NF17065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17065_high_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 32319794 - 32320035
Alignment:
| Q |
1 |
cataggctaagaagatctctcttagcaagttaaaaaacaaaagatatacatagattttatcttggaatttgtgttgacaatggccattttaaaaagtttt |
100 |
Q |
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| T |
32319794 |
cataggctaagaagatctctcttagcaagttaaaaaaccaaagatatacatagattttatcttggaatttgtgttgacaatggccattttaaaaagtttt |
32319893 |
T |
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| Q |
101 |
aaagaatgaatacacaannnnnnnnnattctttaacatgtgctctcagtgtatttgttagca--nnnnnnnngttacaatttgttagcatttttctaact |
198 |
Q |
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| T |
32319894 |
aaagaatgaatacacaatttttttttattctttaacatgtgctctcagtgtatttgttagcattttttttttgttacaatttgttagcatttttctaact |
32319993 |
T |
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| Q |
199 |
taaatggataaaatcctgaaaacagcactggtaaataacagc |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32319994 |
taaatggataaaatcctgaaaacagcactggtaaataacagc |
32320035 |
T |
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