View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17065_high_8 (Length: 375)
Name: NF17065_high_8
Description: NF17065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17065_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 18 - 367
Target Start/End: Original strand, 14731788 - 14732137
Alignment:
| Q |
18 |
ctaagtgtccgcgcttcatatacagacaaattccaaggaacataatccattgaaatgaatttcaagaaacacaatttcagcagccttatatagtggtctt |
117 |
Q |
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| T |
14731788 |
ctaagtgtccgcacttcatatacagacaaattccaaggaacataatccattgaaatgaatttcaagaaacacaatttcagcagccttatatagtggtctt |
14731887 |
T |
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| Q |
118 |
ccaaagaaaaatgagataaattggttattgggacattagaatgttgtcatcatattatattgtcaggaaatacctcaagtgaatgactttgcatgtgctg |
217 |
Q |
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| T |
14731888 |
ccaaagaaaaatgagataaattggttattgggacattagaatgttgtcatcatattatattgtcaggaaatacctcaagtgaatgactttgcatgtgctg |
14731987 |
T |
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| Q |
218 |
caataggtaggcaggnnnnnnnaaactcgcatcacattccatacaagtatttaattttgtatcatgtgcttcttgatctcttccaagtcctgctttttcc |
317 |
Q |
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| T |
14731988 |
caataggtaggcaggtttttttaaactcgcatcacattccatacaagtatttaattttgtatcatgtgcttcttgatctcttccaagtcctgctttttcc |
14732087 |
T |
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| Q |
318 |
atttctacctaagtggcatcattggtcaacaacataaccattagaattat |
367 |
Q |
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| T |
14732088 |
atttctacctaagtggcatcattggtcaacaacataaccattagaattat |
14732137 |
T |
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