View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17065_low_27 (Length: 207)
Name: NF17065_low_27
Description: NF17065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17065_low_27 |
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Alignment Details
Target: chr6 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 4931911 - 4932088
Alignment:
| Q |
13 |
cagtatcataggatataagaccatatagctctcatgaaccataatcactcg--tccttcaatcaaagtcgtatgaatcgtctgatttccttaagagatat |
110 |
Q |
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| T |
4931911 |
cagtatcgttggatataagaccatatagttctcatgaaccataatcacttgagtccttcaatcaaagtcgtatgaatcgtctgattcccttaagagatat |
4932010 |
T |
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| Q |
111 |
cctaaagtgggatatccctaatggattgattacggtgaatgcttacttgaccacgcatgcgatatgagatgtccttaa |
188 |
Q |
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| T |
4932011 |
cctaaagtgagatatccttaatggattgattacggtgaatgcttacttgaacccgcatgcgatatgagatgtccttaa |
4932088 |
T |
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