View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17066_high_19 (Length: 248)
Name: NF17066_high_19
Description: NF17066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17066_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 25494752 - 25494520
Alignment:
| Q |
1 |
ttccttttacaaagttattgtatgctttgatgatatttatacaaattgaaacaatagaagatataagaagaaactttctttgttagtctcctgcaagcaa |
100 |
Q |
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| T |
25494752 |
ttccttttacaaagttattgtatgctttgatgatatttatacaaattgaaacaatagaagatataagaagaaactttctttgttagtctcctgcaagcaa |
25494653 |
T |
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| Q |
101 |
aggaactcaattccttttttatatgtcaatcacatcttaagaagcatgtttacaaaactaaataggagcacacaccttccattcaaatcaaaatccttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
25494652 |
aggaactcaattccttttttatatgtcaatcacatcttaagaagcatgtttacaaaactaaacaggagcacacaccttccattcaaatcaaaatccttgc |
25494553 |
T |
|
| Q |
201 |
cgtttagagttgatccatattaaagggttaatg |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
25494552 |
cgtttagagttgatccatattaaagggttaatg |
25494520 |
T |
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