View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17066_low_26 (Length: 235)
Name: NF17066_low_26
Description: NF17066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17066_low_26 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 46969211 - 46969431
Alignment:
| Q |
1 |
ctcatctttcttcctacgtaaatcaattaattaaattttgagttttcaattaataagttaccatacaagtaatagcacacaaatctcaaatttcttcatc |
100 |
Q |
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| T |
46969211 |
ctcatctttcttcctacgtaaatcaattaattaaattttgagttttcaattaataagttaccatacaagtaatagcacacaaatctcaaatttcttcatt |
46969310 |
T |
|
| Q |
101 |
tatcaattttaaaacgcgtctcggttcaaatgaaaaccatcacaacctgaaaacgaatttgtcatgctattgcaattaatcgtttctgtgtattggattg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
46969311 |
tatcaattttaaaacgcgtctcggttcaaatgaaaaccatcacaacttgaaaacgaatttgtcatgctattgcaattaatcgtttatgtgtattggattg |
46969410 |
T |
|
| Q |
201 |
tggtgtatttgacgaacatag |
221 |
Q |
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||| ||||||||||||||||| |
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| T |
46969411 |
tggagtatttgacgaacatag |
46969431 |
T |
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