View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17067_high_3 (Length: 420)

Name: NF17067_high_3
Description: NF17067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17067_high_3
NF17067_high_3
[»] chr5 (55 HSPs)
chr5 (1-404)||(12595327-12595730)
chr5 (212-264)||(7096214-7096266)
chr5 (177-248)||(42569032-42569103)
chr5 (187-245)||(28586828-28586886)
chr5 (198-251)||(7674592-7674645)
chr5 (177-262)||(9202800-9202885)
chr5 (177-253)||(4014476-4014552)
chr5 (218-262)||(13224362-13224406)
chr5 (187-258)||(12425508-12425579)
chr5 (195-262)||(20982205-20982272)
chr5 (177-260)||(39128574-39128657)
chr5 (213-259)||(28578828-28578874)
chr5 (188-266)||(34160660-34160738)
chr5 (198-264)||(37112331-37112397)
chr5 (198-251)||(11615452-11615505)
chr5 (177-250)||(39594753-39594825)
chr5 (199-251)||(10639897-10639949)
chr5 (198-258)||(11054123-11054182)
chr5 (187-247)||(14295454-14295514)
chr5 (177-253)||(14932232-14932307)
chr5 (218-262)||(26516231-26516275)
chr5 (216-251)||(5563648-5563683)
chr5 (218-253)||(12407754-12407789)
chr5 (198-253)||(29117003-29117058)
chr5 (219-262)||(29588813-29588856)
chr5 (88-131)||(32172716-32172759)
chr5 (212-259)||(37063161-37063208)
chr5 (220-258)||(706400-706438)
chr5 (188-262)||(4991006-4991080)
chr5 (2-48)||(12242561-12242607)
chr5 (219-253)||(12460094-12460128)
chr5 (212-262)||(35135749-35135799)
chr5 (216-262)||(42099952-42099997)
chr5 (198-251)||(465898-465951)
chr5 (204-245)||(10303751-10303792)
chr5 (204-249)||(10363696-10363741)
chr5 (221-258)||(11714962-11714999)
chr5 (177-242)||(12595792-12595857)
chr5 (201-262)||(35095859-35095920)
chr5 (177-262)||(36539679-36539764)
chr5 (190-251)||(38831521-38831582)
chr5 (177-258)||(39105401-39105482)
chr5 (218-258)||(1465112-1465152)
chr5 (221-253)||(1773521-1773553)
chr5 (218-250)||(3735584-3735616)
chr5 (51-131)||(11457161-11457241)
chr5 (206-262)||(21782650-21782706)
chr5 (218-262)||(28776908-28776952)
chr5 (218-262)||(29115306-29115350)
chr5 (218-262)||(34690807-34690851)
chr5 (99-131)||(38047854-38047886)
chr5 (177-253)||(38047907-38047983)
chr5 (218-262)||(39919739-39919783)
chr5 (218-262)||(40048373-40048417)
chr5 (218-258)||(40590464-40590504)
[»] chr6 (45 HSPs)
chr6 (177-259)||(29274281-29274363)
chr6 (177-258)||(31624195-31624276)
chr6 (190-253)||(24836264-24836327)
chr6 (177-250)||(9093608-9093681)
chr6 (201-258)||(9559617-9559674)
chr6 (198-262)||(20671938-20672002)
chr6 (188-262)||(323744-323818)
chr6 (188-262)||(10154154-10154228)
chr6 (188-250)||(24782004-24782066)
chr6 (202-262)||(264304-264364)
chr6 (218-262)||(32917159-32917203)
chr6 (212-262)||(2514635-2514685)
chr6 (212-262)||(4247722-4247771)
chr6 (177-251)||(22742310-22742384)
chr6 (205-259)||(29269832-29269886)
chr6 (197-262)||(4248891-4248956)
chr6 (212-261)||(10452447-10452496)
chr6 (187-251)||(281910-281974)
chr6 (221-253)||(24476544-24476576)
chr6 (204-264)||(29940727-29940787)
chr6 (222-262)||(31461611-31461651)
chr6 (177-253)||(33787797-33787873)
chr6 (88-131)||(32917260-32917303)
chr6 (220-262)||(2454946-2454988)
chr6 (177-251)||(2735013-2735087)
chr6 (216-262)||(10016478-10016524)
chr6 (220-262)||(33416318-33416360)
chr6 (187-253)||(33500543-33500609)
chr6 (205-262)||(4006647-4006704)
chr6 (212-253)||(4420559-4420600)
chr6 (205-262)||(8349744-8349801)
chr6 (213-262)||(21959661-21959710)
chr6 (221-262)||(31668781-31668822)
chr6 (224-252)||(103396-103424)
chr6 (218-262)||(1810393-1810437)
chr6 (221-253)||(5564225-5564257)
chr6 (218-250)||(8147647-8147679)
chr6 (99-131)||(10616516-10616548)
chr6 (221-253)||(10645422-10645454)
chr6 (204-252)||(10728575-10728623)
chr6 (210-262)||(28531626-28531678)
chr6 (212-252)||(30865425-30865465)
chr6 (218-258)||(31672007-31672047)
chr6 (219-259)||(33068655-33068695)
chr6 (99-131)||(34404603-34404635)
[»] chr7 (57 HSPs)
chr7 (181-253)||(3802195-3802267)
chr7 (188-258)||(35536044-35536114)
chr7 (206-262)||(24973877-24973933)
chr7 (198-262)||(30496637-30496701)
chr7 (218-262)||(37832232-37832276)
chr7 (183-262)||(30133982-30134061)
chr7 (219-262)||(33894556-33894599)
chr7 (211-253)||(3968281-3968323)
chr7 (212-262)||(7244635-7244685)
chr7 (182-244)||(30180002-30180064)
chr7 (198-260)||(45813253-45813315)
chr7 (177-262)||(27548196-27548281)
chr7 (204-253)||(28178911-28178960)
chr7 (190-247)||(30456515-30456572)
chr7 (198-251)||(39591540-39591593)
chr7 (198-251)||(42656459-42656512)
chr7 (218-250)||(4970881-4970913)
chr7 (218-262)||(5373158-5373202)
chr7 (218-262)||(8445219-8445263)
chr7 (198-250)||(28440464-28440516)
chr7 (205-253)||(43152982-43153030)
chr7 (198-253)||(1417206-1417261)
chr7 (198-253)||(5006582-5006637)
chr7 (211-250)||(20476596-20476635)
chr7 (204-251)||(23214831-23214878)
chr7 (190-253)||(28613599-28613662)
chr7 (212-259)||(31341130-31341177)
chr7 (177-252)||(32730303-32730378)
chr7 (177-244)||(34083577-34083644)
chr7 (187-246)||(40689048-40689107)
chr7 (212-262)||(1423079-1423129)
chr7 (212-262)||(5276157-5276207)
chr7 (187-253)||(6824860-6824926)
chr7 (211-253)||(7453484-7453526)
chr7 (184-246)||(12834996-12835058)
chr7 (212-246)||(19123198-19123232)
chr7 (49-131)||(30535626-30535708)
chr7 (220-262)||(35808999-35809041)
chr7 (211-253)||(49060482-49060524)
chr7 (205-262)||(2223081-2223138)
chr7 (190-259)||(3501031-3501100)
chr7 (221-262)||(3610836-3610877)
chr7 (213-262)||(4591475-4591524)
chr7 (198-251)||(5715111-5715164)
chr7 (177-250)||(12110305-12110378)
chr7 (212-253)||(27626211-27626252)
chr7 (205-262)||(28165024-28165081)
chr7 (198-259)||(39539834-39539895)
chr7 (198-259)||(45593792-45593853)
chr7 (177-250)||(48469989-48470062)
chr7 (204-252)||(2767257-2767305)
chr7 (222-262)||(22388001-22388041)
chr7 (177-249)||(22759132-22759204)
chr7 (212-248)||(30160977-30161013)
chr7 (191-251)||(35266843-35266903)
chr7 (198-250)||(43318601-43318653)
chr7 (218-262)||(46213736-46213780)
[»] chr3 (53 HSPs)
chr3 (178-258)||(402595-402674)
chr3 (182-262)||(20192663-20192743)
chr3 (187-250)||(16073105-16073168)
chr3 (198-262)||(1395604-1395668)
chr3 (199-250)||(30956700-30956751)
chr3 (199-250)||(30972512-30972563)
chr3 (188-251)||(31053153-31053216)
chr3 (177-248)||(36783386-36783457)
chr3 (219-253)||(44061117-44061151)
chr3 (204-262)||(44374723-44374781)
chr3 (197-250)||(15304419-15304472)
chr3 (213-262)||(41028939-41028988)
chr3 (188-253)||(45535345-45535410)
chr3 (198-251)||(49586989-49587042)
chr3 (205-253)||(2128331-2128379)
chr3 (212-264)||(24268242-24268294)
chr3 (210-253)||(30666293-30666337)
chr3 (218-250)||(37689178-37689210)
chr3 (199-251)||(38462225-38462277)
chr3 (213-252)||(905058-905097)
chr3 (187-262)||(3182424-3182499)
chr3 (211-262)||(16790442-16790493)
chr3 (207-262)||(25964375-25964430)
chr3 (198-253)||(32703080-32703135)
chr3 (88-131)||(37273197-37273240)
chr3 (198-253)||(42809243-42809298)
chr3 (88-131)||(43115119-43115162)
chr3 (216-262)||(8142801-8142847)
chr3 (212-262)||(12923412-12923462)
chr3 (189-251)||(32095255-32095317)
chr3 (198-251)||(34638037-34638091)
chr3 (198-264)||(43116501-43116567)
chr3 (205-251)||(46778307-46778353)
chr3 (349-390)||(1810047-1810088)
chr3 (198-262)||(21862248-21862313)
chr3 (212-257)||(24235770-24235815)
chr3 (177-250)||(24684875-24684948)
chr3 (211-252)||(34318031-34318072)
chr3 (177-250)||(39602262-39602334)
chr3 (212-253)||(40122839-40122880)
chr3 (204-253)||(48364958-48365007)
chr3 (187-252)||(52618946-52619011)
chr3 (212-264)||(8007782-8007834)
chr3 (198-250)||(10101549-10101601)
chr3 (198-250)||(10212474-10212526)
chr3 (218-262)||(16790181-16790225)
chr3 (177-245)||(25447296-25447364)
chr3 (177-245)||(33405219-33405287)
chr3 (212-252)||(34254896-34254936)
chr3 (177-253)||(36189508-36189584)
chr3 (191-251)||(36646448-36646508)
chr3 (218-262)||(42039092-42039136)
chr3 (218-262)||(52413214-52413258)
[»] chr8 (47 HSPs)
chr8 (198-253)||(3537104-3537159)
chr8 (177-262)||(10727130-10727214)
chr8 (219-262)||(10114423-10114466)
chr8 (177-262)||(13652148-13652233)
chr8 (177-262)||(13710791-13710876)
chr8 (205-262)||(14482135-14482192)
chr8 (50-142)||(6950374-6950466)
chr8 (201-253)||(27465315-27465367)
chr8 (187-253)||(9699943-9700009)
chr8 (198-264)||(29056064-29056130)
chr8 (204-262)||(42597334-42597392)
chr8 (198-251)||(11000634-11000687)
chr8 (219-263)||(1112785-1112829)
chr8 (218-266)||(1929980-1930028)
chr8 (198-258)||(14280474-14280534)
chr8 (198-258)||(26215433-26215493)
chr8 (218-250)||(29168145-29168177)
chr8 (55-131)||(30191072-30191148)
chr8 (205-253)||(32976359-32976407)
chr8 (177-245)||(35374425-35374493)
chr8 (198-258)||(37444488-37444548)
chr8 (178-253)||(1470909-1470984)
chr8 (191-250)||(13561378-13561437)
chr8 (199-250)||(13822120-13822171)
chr8 (88-131)||(40071812-40071855)
chr8 (198-253)||(41475133-41475188)
chr8 (211-253)||(2364559-2364601)
chr8 (212-262)||(3645903-3645953)
chr8 (99-145)||(9540971-9541017)
chr8 (177-259)||(11795028-11795110)
chr8 (204-262)||(35298557-35298615)
chr8 (221-250)||(9541071-9541100)
chr8 (204-253)||(31915348-31915397)
chr8 (177-250)||(33209272-33209345)
chr8 (197-262)||(35534933-35534998)
chr8 (177-262)||(35869770-35869855)
chr8 (205-262)||(38036192-38036249)
chr8 (212-253)||(39392748-39392789)
chr8 (218-251)||(43718023-43718056)
chr8 (218-262)||(4558731-4558775)
chr8 (198-262)||(7646139-7646203)
chr8 (218-262)||(11188248-11188292)
chr8 (349-405)||(11569416-11569472)
chr8 (218-250)||(12976158-12976190)
chr8 (220-264)||(14949819-14949863)
chr8 (212-252)||(26820142-26820182)
chr8 (187-259)||(29699190-29699262)
[»] chr1 (59 HSPs)
chr1 (191-253)||(36151571-36151633)
chr1 (177-256)||(49517009-49517088)
chr1 (178-252)||(40304107-40304181)
chr1 (180-245)||(17628549-17628614)
chr1 (212-253)||(23895278-23895319)
chr1 (198-258)||(10233703-10233763)
chr1 (190-253)||(27145800-27145863)
chr1 (221-262)||(6659636-6659677)
chr1 (218-259)||(7028228-7028269)
chr1 (212-261)||(43029488-43029537)
chr1 (205-262)||(46499934-46499991)
chr1 (204-253)||(50319234-50319283)
chr1 (218-258)||(3887725-3887765)
chr1 (218-262)||(4768917-4768961)
chr1 (189-253)||(9572172-9572236)
chr1 (198-258)||(23544713-23544773)
chr1 (193-253)||(27146316-27146376)
chr1 (188-244)||(47877073-47877129)
chr1 (188-248)||(51190808-51190868)
chr1 (211-262)||(289173-289224)
chr1 (205-252)||(11560629-11560676)
chr1 (223-262)||(13037797-13037836)
chr1 (88-131)||(23373277-23373320)
chr1 (223-262)||(29046011-29046050)
chr1 (216-251)||(29904703-29904738)
chr1 (218-253)||(36643110-36643145)
chr1 (198-253)||(37841940-37841995)
chr1 (218-253)||(37842448-37842483)
chr1 (223-262)||(38883008-38883047)
chr1 (218-252)||(4777378-4777412)
chr1 (190-252)||(5756751-5756813)
chr1 (198-248)||(15687146-15687196)
chr1 (204-262)||(38651488-38651546)
chr1 (219-253)||(45145168-45145202)
chr1 (212-262)||(45999375-45999425)
chr1 (177-243)||(48064261-48064327)
chr1 (208-262)||(49557074-49557128)
chr1 (218-259)||(172277-172318)
chr1 (220-253)||(1432457-1432490)
chr1 (218-259)||(4549802-4549843)
chr1 (204-249)||(14737784-14737829)
chr1 (198-263)||(15360826-15360891)
chr1 (177-250)||(24915103-24915176)
chr1 (198-251)||(28689527-28689580)
chr1 (177-262)||(29793715-29793800)
chr1 (177-250)||(33527199-33527272)
chr1 (198-259)||(34619451-34619512)
chr1 (204-253)||(40357965-40358014)
chr1 (234-266)||(488930-488962)
chr1 (187-259)||(1255493-1255565)
chr1 (177-252)||(7069243-7069319)
chr1 (187-251)||(7472256-7472319)
chr1 (99-131)||(28467496-28467528)
chr1 (221-253)||(33339516-33339548)
chr1 (211-251)||(36641819-36641859)
chr1 (199-251)||(38867907-38867959)
chr1 (218-262)||(42397696-42397740)
chr1 (218-266)||(43722408-43722456)
chr1 (204-260)||(48748662-48748717)
[»] scaffold0024 (2 HSPs)
scaffold0024 (190-262)||(27509-27581)
scaffold0024 (198-253)||(21351-21406)
[»] chr2 (64 HSPs)
chr2 (178-262)||(4026750-4026834)
chr2 (198-262)||(35459843-35459907)
chr2 (218-257)||(26143734-26143773)
chr2 (198-262)||(44600472-44600538)
chr2 (177-251)||(656829-656903)
chr2 (177-262)||(2416246-2416331)
chr2 (181-262)||(25609729-25609810)
chr2 (198-250)||(43259779-43259831)
chr2 (199-262)||(3611159-3611222)
chr2 (211-262)||(11393452-11393503)
chr2 (211-262)||(11410113-11410164)
chr2 (218-260)||(5942860-5942902)
chr2 (212-262)||(28677739-28677789)
chr2 (199-253)||(40837502-40837556)
chr2 (218-259)||(5133708-5133749)
chr2 (188-253)||(19629241-19629306)
chr2 (188-253)||(19826142-19826207)
chr2 (218-262)||(11393748-11393792)
chr2 (218-262)||(11410409-11410453)
chr2 (198-262)||(14209210-14209274)
chr2 (211-251)||(31461382-31461422)
chr2 (218-262)||(34054994-34055038)
chr2 (198-262)||(34339056-34339120)
chr2 (222-262)||(41033047-41033087)
chr2 (206-253)||(3100073-3100120)
chr2 (212-259)||(3102629-3102676)
chr2 (71-130)||(10567121-10567180)
chr2 (212-259)||(13866825-13866872)
chr2 (212-251)||(17952788-17952827)
chr2 (212-251)||(32098395-32098434)
chr2 (218-253)||(32694154-32694189)
chr2 (218-257)||(39567841-39567880)
chr2 (212-262)||(10143105-10143155)
chr2 (198-244)||(10739225-10739271)
chr2 (204-262)||(11344363-11344421)
chr2 (177-251)||(15377709-15377783)
chr2 (191-265)||(33192123-33192197)
chr2 (212-262)||(38239638-38239688)
chr2 (205-251)||(40758967-40759013)
chr2 (224-253)||(680138-680167)
chr2 (205-250)||(3932295-3932340)
chr2 (202-251)||(3978485-3978534)
chr2 (213-262)||(5045245-5045294)
chr2 (200-253)||(23747246-23747299)
chr2 (218-263)||(30990462-30990507)
chr2 (213-262)||(33197327-33197376)
chr2 (348-405)||(38078368-38078425)
chr2 (219-252)||(42420388-42420421)
chr2 (99-131)||(1742007-1742039)
chr2 (218-258)||(2142590-2142630)
chr2 (99-131)||(4550810-4550842)
chr2 (54-146)||(5759505-5759596)
chr2 (202-250)||(7928371-7928419)
chr2 (212-248)||(9878769-9878805)
chr2 (218-262)||(13864583-13864627)
chr2 (99-131)||(15120246-15120278)
chr2 (218-262)||(18962131-18962175)
chr2 (218-262)||(26522717-26522761)
chr2 (198-262)||(36114596-36114660)
chr2 (190-262)||(37053527-37053599)
chr2 (190-262)||(37766731-37766803)
chr2 (218-262)||(41039739-41039783)
chr2 (349-405)||(41905875-41905931)
chr2 (205-253)||(42457890-42457938)
[»] chr4 (54 HSPs)
chr4 (177-252)||(3175894-3175969)
chr4 (188-262)||(54325100-54325174)
chr4 (205-253)||(3155545-3155593)
chr4 (218-262)||(4798652-4798696)
chr4 (190-250)||(42321944-42322004)
chr4 (211-262)||(28232478-28232529)
chr4 (222-265)||(34213691-34213734)
chr4 (212-262)||(47970251-47970301)
chr4 (212-262)||(51044546-51044596)
chr4 (193-262)||(17884001-17884070)
chr4 (198-259)||(22684589-22684650)
chr4 (212-253)||(52645836-52645877)
chr4 (177-242)||(53626729-53626794)
chr4 (222-262)||(4191672-4191712)
chr4 (177-253)||(25885801-25885877)
chr4 (199-259)||(44138495-44138555)
chr4 (198-250)||(53422307-53422359)
chr4 (218-253)||(1203210-1203245)
chr4 (56-131)||(2841689-2841764)
chr4 (212-247)||(4691826-4691861)
chr4 (218-253)||(6364091-6364126)
chr4 (199-258)||(7601696-7601755)
chr4 (178-253)||(19691349-19691424)
chr4 (178-253)||(19701934-19702009)
chr4 (205-252)||(34368820-34368867)
chr4 (212-246)||(19670882-19670916)
chr4 (212-262)||(27671919-27671969)
chr4 (223-253)||(28274886-28274916)
chr4 (220-258)||(49004065-49004103)
chr4 (200-258)||(55575957-55576014)
chr4 (178-252)||(56480291-56480365)
chr4 (212-253)||(19040202-19040243)
chr4 (212-253)||(21193940-21193981)
chr4 (213-262)||(21593099-21593148)
chr4 (177-262)||(24443971-24444056)
chr4 (218-259)||(25487638-25487679)
chr4 (212-257)||(28749994-28750039)
chr4 (198-247)||(41701514-41701563)
chr4 (198-251)||(44007945-44007998)
chr4 (204-253)||(49803153-49803202)
chr4 (178-259)||(50745936-50746017)
chr4 (188-257)||(51630049-51630118)
chr4 (220-253)||(55437030-55437063)
chr4 (218-262)||(486014-486058)
chr4 (218-250)||(2702985-2703017)
chr4 (211-259)||(9680600-9680648)
chr4 (218-262)||(18967495-18967539)
chr4 (211-250)||(24371039-24371079)
chr4 (178-258)||(27043883-27043963)
chr4 (198-250)||(30024645-30024697)
chr4 (218-258)||(34430779-34430819)
chr4 (211-251)||(37733943-37733983)
chr4 (213-253)||(44119250-44119290)
chr4 (218-262)||(51555960-51556004)
[»] scaffold0590 (1 HSPs)
scaffold0590 (212-262)||(1161-1211)
[»] scaffold0275 (1 HSPs)
scaffold0275 (212-262)||(2764-2814)
[»] scaffold0060 (1 HSPs)
scaffold0060 (218-262)||(63378-63422)
[»] scaffold0110 (1 HSPs)
scaffold0110 (177-260)||(4275-4359)
[»] scaffold0053 (1 HSPs)
scaffold0053 (198-262)||(20112-20176)
[»] scaffold0020 (1 HSPs)
scaffold0020 (212-260)||(160059-160107)


Alignment Details
Target: chr5 (Bit Score: 347; Significance: 0; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Original strand, 12595327 - 12595730
Alignment:
Q  1 atagagctaaagctgtatgaggatccagcaatagggtttatggaagataattgacttatttgagttaatttattgtcataaatacccgtgagattgtctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  12595327 atagagctaaagctgtatgaggatccagcaatagggtttatggaagataattgacttatttgagttaatttattgtcataaatacttgtgagattgtctg 12595426  T
Q  101 ggagagattatggaaacaacttatgacatgtagataatttgtgttttcaggtatttccataatctttccnnnnnnncttataaaatcagcttataattta 200  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  12595427 ggagagattatggaaacaacttacgacatgtggataatttgtgttttcaggtatttccataatcttttaaaaaaaacttataaaatcagcttataattta 12595526  T
Q  201 tacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgtgcgattatttgtgagagcatgctgttaaaggatata 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12595527 tacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgtgcgattatttgtgagagcatgctgttaaaggatata 12595626  T
Q  301 aaacattaatgtttccactgttttatttgagtctacctacttgctaggcacttgtgagactatctgagagagcttaaggaaacagcttattgcatgttca 400  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12595627 aaacattaatgcttccactgttttatttgagtttacctacttgctaggcacttgtgagactatttgagagagcttaaggaaacagcttattgcatgttca 12595726  T
Q  401 taag 404  Q
    ||||    
T  12595727 taag 12595730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 7096214 - 7096266
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7096214 tttgactttattttatcttttgttatagaaatagcttatacataagcacttgt 7096266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 42569032 - 42569103
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 248  Q
    ||||| ||| ||| |||||  |||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  42569032 cttatcaaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaatagctt 42569103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 28586828 - 28586886
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    |||||||||||||||| ||||||  ||||| |||||||||||||||| |||||||||||    
T  28586828 cagcttataatttatatgaaaacagtttgactttattttatcttttgttatagaaatag 28586886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 7674645 - 7674592
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| |||| |||||||||||||||||| |||||||||||||||||    
T  7674645 ttataagaaaacaatttaaatttattttatcttttggtatagaaatagcttata 7674592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 9202800 - 9202885
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| ||||||||   ||||| |||||| |||| | ||||||||||||||||||| |||||||||||||| | ||||||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcactt 9202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 4014476 - 4014552
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||| |||||||| |||| | | ||||| || | | ||||||||||||||||||||||||||||||||||||    
T  4014476 cttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttttgctatagaaatagcttataca 4014552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 13224406 - 13224362
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 12425579 - 12425508
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||  |||||||||||| |||| | ||||||||||||||| ||||| |||||| ||||||| ||||    
T  12425579 cagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaatagtttatacataagc 12425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 20982205 - 20982272
Alignment:
Q  195 aatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||| ||||||   |||| ||||||||||| |||| ||||||||||||||||||| ||||||||    
T  20982205 aatttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcactt 20982272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 39128657 - 39128574
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcac 260  Q
    |||||||||  || ||||| |||||  || ||| |||||| |||||||||||||||| ||||||| ||||||||||| ||||||    
T  39128657 cttataaaaatagtttatagtttatttgagaacaatttgactttattttatcttttgttatagaattagcttatacataagcac 39128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 28578874 - 28578828
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||    
T  28578874 ttgactttattttatcttatgttatagaaatagcttatacacaagca 28578828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 34160738 - 34160660
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgtgc 266  Q
    ||||||||| || ||||||||  |||| |||||||||||  || ||||||||||||| |||||||| ||||| ||||||    
T  34160738 agcttataaattttacgaaaagaatttcaatttattttacattctgctatagaaatatcttatacataagcatttgtgc 34160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 37112331 - 37112397
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    |||||| ||||| |||| | ||| |||||||||||||| ||||||||||||||||| |||| |||||    
T  37112331 ttatacaaaaacaatttaactttgttttatcttttgctgtagaaatagcttatacataagcgcttgt 37112397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 11615505 - 11615452
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||||| |||| |||||| |||||||||||||||| |||| ||||||||||||    
T  11615505 ttatacgtaaacaatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 39594825 - 39594753
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| ||||||| || |||| ||||||| |||| | ||||||||||||||| |||||||||||||||||    
T  39594825 cttatgaaaacagcttacaacttatgcgaaaacaattt-actttattttatctttttctatagaaatagcttat 39594753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 10639949 - 10639897
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||||| |||| | || |||||||||||||||||||||||||||||||    
T  10639949 tatacaaaaacaatttaatttaattttatcttttgctatagaaatagcttata 10639897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 11054182 - 11054123
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||||| || | |||||||||||||||  ||||||||||||||||||| ||||    
T  11054182 ttatacgaaaactaatt-actttattttatcttttattatagaaatagcttatacataagc 11054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 14295514 - 14295454
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 247  Q
    |||||||||  ||||| ||||||  ||||| |||||||||||||||| |||||||||||||    
T  14295514 cagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagct 14295454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 14932307 - 14932232
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||| | |||||||||  |||||| ||||| |||| | ||||||||||||||||||||| |||||| |||||||    
T  14932307 cttataacaacagcttatagcttatac-aaaacaatttaactttattttatcttttgctataaaaatagattataca 14932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 26516275 - 26516231
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcactt 26516231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 5563683 - 5563648
Alignment:
Q  216 aatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||||||||||||| |||||||||||||||||    
T  5563683 aatttattttatcttttgttatagaaatagcttata 5563648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 12407754 - 12407789
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||| |||||||||||||||||||    
T  12407754 tttattttatcttttgttatagaaatagcttataca 12407789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 29117003 - 29117058
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||  ||||| |||||||||||||||| |||||||||| | ||||||    
T  29117003 ttatacgaaaacagtttgactttattttatcttttgttatagaaataacatataca 29117058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 29588856 - 29588813
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagcactt 29588813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 32172759 - 32172716
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    ||||||| || |||||||| ||||||||||||||||||||||||    
T  32172759 gtgagatagtttgggagagcttatggaaacaacttatgacatgt 32172716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 37063161 - 37063208
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| |||||    
T  37063161 tttgactttattttatcttttgttatagaaatagtttatacataagca 37063208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 706438 - 706400
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  706438 tattttatcttttactatagaaatagcttatacataagc 706400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 4991006 - 4991080
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| ||||| |||||  | ||||  |||| |||||||||| |||| ||||||||||||||||| |||||    
T  4991006 agcttataacttatatgaaaataaattgatcttatgttatcttttgttataaaaatagcttatacacaaacactt 4991080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 12242561 - 12242607
Alignment:
Q  2 tagagctaaagctgtatgaggatccagcaatagggtttatggaagat 48  Q
    ||||||||||||||||||||||||||| || ||| ||| ||||||||    
T  12242561 tagagctaaagctgtatgaggatccaggaacaggatttgtggaagat 12242607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 12460094 - 12460128
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||||| |||||||||||||||||||    
T  12460094 ttattttatcttttgttatagaaatagcttataca 12460128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 35135749 - 35135799
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||| |||||||||| |||||||| || |||||    
T  35135749 tttgactttattttatcttttgttatagaaatatcttatacataaacactt 35135799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 42099952 - 42099997
Alignment:
Q  216 aatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||    
T  42099952 aatttattttat-ttttgctatataaatagcttatacataagcactt 42099997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 465951 - 465898
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| ||||| |||| | ||||||||||||||||  ||||||||||||||||    
T  465951 ttatacaaaaacaatttaactttattttatcttttgtcatagaaatagcttata 465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 10303792 - 10303751
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    |||||| |||||| |||||||||||||||| |||||||||||    
T  10303792 gaaaacaatttgactttattttatcttttgttatagaaatag 10303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 10363741 - 10363696
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagctta 249  Q
    |||||| |||| | |||||||||||||||| |||||||||||||||    
T  10363741 gaaaacaatttaactttattttatcttttgttatagaaatagctta 10363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 258
Target Start/End: Original strand, 11714962 - 11714999
Alignment:
Q  221 attttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  11714962 attttatcttttgttatagaaatagcttatatacaagc 11714999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 12595792 - 12595857
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaa 242  Q
    ||||| ||| ||||| ||| |||||| |||||| |||| | |||||||||||||||| ||||||||    
T  12595792 cttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatcttttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 35095859 - 35095920
Alignment:
Q  201 tacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||| |||||| |||||||||||||||| ||||||||||| ||| | | ||||||||    
T  35095859 tacggaaacaatttgactttattttatcttttgttatagaaatagtttaaatataagcactt 35095920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 36539764 - 36539679
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| || ||||||  ||||| ||||||   |||| |||||||||||||||| || | |||||||||| ||| ||||||||    
T  36539764 cttataaaaacaacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcactt 36539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 251
Target Start/End: Original strand, 38831521 - 38831582
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||   | ||||||||||||||    
T  38831521 cttatcatttatacgaaaacagtttgactttattttatcttttataacagaaatagcttata 38831582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 39105482 - 39105401
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||| ||| ||| |||||  |||||||||||| |||| | || |||| || ||| ||||||||||||||||||||| ||||    
T  39105482 cttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaatagcttatacataagc 39105401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 1465112 - 1465152
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||||| | |||||||||||||||||||||| ||||    
T  1465112 tttattttatcctatgctatagaaatagcttatacataagc 1465152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 1773521 - 1773553
Alignment:
Q  221 attttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||| |||||||||||||||||||    
T  1773521 attttatcttttgttatagaaatagcttataca 1773553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 3735584 - 3735616
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    ||||||| |||||||||||||||||||||||||    
T  3735584 tttatttcatcttttgctatagaaatagcttat 3735616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 11457241 - 11457161
Alignment:
Q  51 ttgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||||||| | || ||||| || ||| ||  |||||| ||| | | |||| ||||||||||||||||||||||||    
T  11457241 ttgacttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgt 11457161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 21782650 - 21782706
Alignment:
Q  206 aaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||| ||||||||| |||||| ||||||||||||||| ||| || |||||    
T  21782650 aaacaatttgactttattttagcttttgttatagaaatagcttaaacataaacactt 21782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 28776952 - 28776908
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||| | ||| |||||||||||||| ||||||||    
T  28776952 tttattttatctttttcaataaaaatagcttatacataagcactt 28776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 29115306 - 29115350
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| |||||| | ||||||||||||||||| ||||||||    
T  29115306 tttattttaccttttgttgtagaaatagcttatacataagcactt 29115350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 34690851 - 34690807
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||||| |||||| ||| ||||    
T  34690851 tttattttatcttttgttatagaaatagcgtatacataaggactt 34690807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 38047854 - 38047886
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  38047854 tgggagagcttatggaaacaacttatgacatgt 38047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 38047907 - 38047983
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||| |||| |||| | |||| |||||  |||||| |||||||||||||||| || ||| ||||||||||||    
T  38047907 cttatgaaaacagcatatagtatatatgaaaataatttgactttattttatcttttgttagagatatagcttataca 38047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 39919739 - 39919783
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| |||||||| ||||||| ||||||||||| ||||||||    
T  39919739 tttatttaatcttttgttatagaattagcttatacataagcactt 39919783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 40048373 - 40048417
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||    
T  40048373 tttattttatcttttgttatagaaacaacttatacataagcactt 40048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 40590504 - 40590464
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||||||||| |||||||| ||||||||||| ||||    
T  40590504 tttattttatctttttctatagaagtagcttatacataagc 40590464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 259
Target Start/End: Original strand, 29274281 - 29274363
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| ||| ||| |||||  ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 31624276 - 31624195
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||| ||| ||||| |||  |||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||    
T  31624276 cttattaaaacagctaatagattatacgaaaacaatttaaacttattttatcttttgttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 24836264 - 24836327
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| ||||||||||||| |||||| |||||||||||||||| |||||||||| ||||||||    
T  24836264 cttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttataca 24836327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 9093608 - 9093681
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| |||||||||  |||||||||||| |||| | |||||||||||||||| ||||||||||||||||    
T  9093608 cttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 9559617 - 9559674
Alignment:
Q  201 tacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  9559617 tacgaaaacaatttaaatttattttatcttttgctatagaaataacttatacataagc 9559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 20671938 - 20672002
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| |||||| |||||||||||||||| | ||||||||||||||||| || |||||    
T  20671938 ttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcactt 20672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 323818 - 323744
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||| ||||| ||||||  |||||||||||||||||||||  ||||||||||||||||||| || |||||    
T  323818 agctcataacttatatgaaaacagtttgaatttattttatcttttaatatagaaatagcttatacaaaaccactt 323744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 10154228 - 10154154
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| ||||| ||||||  ||||| ||||||||||||||| ||||||||| ||||| |||| ||||||||    
T  10154228 agcttataacttatatgaaaacagtttgactttattttatctttttctatagaaacagcttgtacagaagcactt 10154154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 24782066 - 24782004
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||| ||||| |||||| |||||| || ||||||||||||| ||||||||||||||||    
T  24782066 agcttataacttatatgaaaacaatttgatttgattttatcttttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 264364 - 264304
Alignment:
Q  202 acgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||| |||| | |||||||||||||||||| ||||||||||||||| | ||||||||    
T  264364 acgaaaacgatttaactttattttatcttttgctttagaaatagcttatatataagcactt 264304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 32917203 - 32917159
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  32917203 tttattttatcttttgctattgaaatagcttatacataagcactt 32917159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 2514685 - 2514635
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||  ||||||||||||||||||| ||||||||    
T  2514685 tttgactttattttatcttttattatagaaatagcttatacataagcactt 2514635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 4247722 - 4247771
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  4247722 tttgaattt-ttttatcttttgttatagaaatagcttatacataagcactt 4247771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 22742384 - 22742310
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||||  ||||||||  ||||| |||||| |||||| ||||||||||| |||| |||| ||||||||||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttata 22742310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 29269886 - 29269832
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||| ||||||||||||| || ||||||||||| |||||||||||||    
T  29269886 aaaacaatttgactttattttatcttctgttatagaaatagtttatacacaagca 29269832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 4248956 - 4248891
Alignment:
Q  197 tttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| ||| | |||||| |||||||||||||||| ||| ||||||||||||| | ||||||||    
T  4248956 tttatacaaaatcaatttgactttattttatcttttgttattgaaatagcttatatataagcactt 4248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 10452447 - 10452496
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcact 261  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||||||    
T  10452447 tttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 281910 - 281974
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||||  ||||| |||||| | |||| |||||||||||||||| ||||| |||||||||||    
T  281910 cagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 253
Target Start/End: Complemental strand, 24476576 - 24476544
Alignment:
Q  221 attttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||||||||||||||||||    
T  24476576 attttatcttttgctatagaaatagcttataca 24476544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 29940787 - 29940727
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    |||||| | |||| |||||||||||||||| |||||||| |||||||||  ||||||||||    
T  29940787 gaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcacttgt 29940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 31461651 - 31461611
Alignment:
Q  222 ttttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcactt 31461611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 33787797 - 33787873
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||| |||||||||| ||||| |||| | |||||| ||| |||||| ||||| ||||||||||| |||||||    
T  33787797 cttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttataca 33787873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 32917303 - 32917260
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  32917303 gtgagactgtttgggagagcttatggaaacaacttatgacatgt 32917260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 2454988 - 2454946
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||||| |||| ||||||||    
T  2454988 tattttatcttttgctgtagaaatagcttttacataagcactt 2454946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 2735087 - 2735013
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||| |||||||||  |||||| ||||  |||| | |||||||||||||||| |||||| ||||||||||    
T  2735087 cttatgaaaacagcttatagattatacaaaaataatttaactttattttatcttttgttatagacatagcttata 2735013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 10016524 - 10016478
Alignment:
Q  216 aatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||    
T  10016524 aatttattttatcttttggtttagaaatagcttatacataaggactt 10016478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 33416360 - 33416318
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||| |||| |||||||||||||| ||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataagcactt 33416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 33500543 - 33500609
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||| |||||   ||||  ||||| |||| ||||||||||| |||||||||||||||||||    
T  33500543 cagcttataacttatattgaaacagtttgattttactttatcttttgttatagaaatagcttataca 33500609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 4006704 - 4006647
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| ||||||||||| |||| |||||||||| ||||| || ||||||||    
T  4006704 aaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcactt 4006647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 4420600 - 4420559
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  4420600 tttgactttattttatcttttgttatagaagtagcttataca 4420559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 8349744 - 8349801
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||| | |||||||||||||||| || |||||||| |||||||||| |||||    
T  8349744 aaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacactt 8349801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 21959710 - 21959661
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||||||||||||| ||| ||||||||||||||  ||||||||    
T  21959710 ttgactttattttatcttttgttatggaaatagcttatacttaagcactt 21959661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 31668781 - 31668822
Alignment:
Q  221 attttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcactt 31668822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Complemental strand, 103424 - 103396
Alignment:
Q  224 ttatcttttgctatagaaatagcttatac 252  Q
    |||||||||||||||||||||||||||||    
T  103424 ttatcttttgctatagaaatagcttatac 103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 1810393 - 1810437
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||||||| | || ||||||||    
T  1810393 tttattttatcttttgttatagaaatagcttttgcataagcactt 1810437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 5564225 - 5564257
Alignment:
Q  221 attttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||| ||||||||||||||    
T  5564225 attttatcttttgctatataaatagcttataca 5564257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 8147679 - 8147647
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||||||||||||||| |||||||||||    
T  8147679 tttattttatcttttgctataaaaatagcttat 8147647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 10616516 - 10616548
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  10616516 tgggagagcttatggaaacaacttatgacatgt 10616548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 10645422 - 10645454
Alignment:
Q  221 attttatcttttgctatagaaatagcttataca 253  Q
    |||||||| ||||||||||||||||||||||||    
T  10645422 attttatcgtttgctatagaaatagcttataca 10645454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 10728623 - 10728575
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||||| |||| | |||||||||||||||||| |||||||| |||||||    
T  10728623 gaaaacaatttaactttattttatcttttgctttagaaataacttatac 10728575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 28531626 - 28531678
Alignment:
Q  210 tatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| |||||||||||||||| |||| ||||| ||||||||  |||||||    
T  28531626 tatttgactttattttatcttttgttatataaataacttatacaagagcactt 28531678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 30865465 - 30865425
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| |||||||||||||||| ||||||||||||| ||||    
T  30865465 tttgactttattttatcttttgttatagaaatagctcatac 30865425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 31672047 - 31672007
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||||||| |||||||||| |||||||| ||||    
T  31672047 tttattttatcttttgttatagaaataacttatacagaagc 31672007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 33068655 - 33068695
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||||||||||||| |||||||||| |||||||| |||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataagca 33068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 34404635 - 34404603
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  34404635 tgggagagcttatggaaacaacttatgacatgt 34404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 3802195 - 3802267
Alignment:
Q  181 taaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||||||||||||| |||||| |||||| ||||||||| |||||  |||||||||||||||||||    
T  3802195 taaaaacagcttataatttatatgaaaacgatttgactttattttaccttttattatagaaatagcttataca 3802267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 35536114 - 35536044
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||| ||||| |||||| |||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 24973933 - 24973877
Alignment:
Q  206 aaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  24973933 aaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcactt 24973877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 30496701 - 30496637
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| |||||| |||||||||| ||||| ||||||||||| ||||||| || |||||    
T  30496701 ttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacactt 30496637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 37832232 - 37832276
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||    
T  37832232 tttattttatattttgctatagaaatagtttatacacaagcactt 37832276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 262
Target Start/End: Complemental strand, 30134061 - 30133982
Alignment:
Q  183 aaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||| |  |||||||||||| | |||| |||||||||||||||| | || |||||||||||||| || |||||    
T  30134061 aaatcagcttaaagcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacactt 30133982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 33894599 - 33894556
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  33894599 ttattttatcttttgttatagaaatagcttatacataagcactt 33894556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 3968281 - 3968323
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  3968281 atttaaatttattttatcttttgctatagaaataacttataca 3968323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 7244685 - 7244635
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| ||||||||    
T  7244685 tttgactttcttttatcttttgatatagaaatagcttatacataagcactt 7244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 30180064 - 30180002
Alignment:
Q  182 aaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 244  Q
    |||| |||||||||  |||||||||||| |||| | |||||||||||||||||||| ||||||    
T  30180064 aaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgctatcgaaata 30180002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 45813253 - 45813315
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcac 260  Q
    ||||| |||||| | |||| |||||||||||||||| ||||||||||||||||| | ||||||    
T  45813253 ttatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 27548281 - 27548196
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| |||||||||  ||| | |||||| ||| || |||||||||||||||||||  ||||||||||||| | ||||||||    
T  27548281 cttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcactt 27548196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 28178960 - 28178911
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| || ||| |||||||||||||||| |||||||||||||||||||    
T  28178960 gaaaacaatatgactttattttatcttttgttatagaaatagcttataca 28178911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 190 - 247
Target Start/End: Original strand, 30456515 - 30456572
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 247  Q
    ||||||| ||||| |||||| |||||| |||||||||||||||| | |||||||||||    
T  30456515 cttataacttatatgaaaacaatttgactttattttatcttttgttttagaaatagct 30456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 39591540 - 39591593
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| |||||| |||||||||||||||| |||||||||| ||||||    
T  39591540 ttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 42656512 - 42656459
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| ||||  |||||| |||||||||||||||| |||||||||||||||||    
T  42656512 ttatacaaaaatgatttgactttattttatcttttgttatagaaatagcttata 42656459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 4970881 - 4970913
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||||||||||||||||||||||||    
T  4970881 tttattttatcttttgctatagaaatagcttat 4970913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 5373202 - 5373158
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||    
T  5373202 tttattttatcttttgttatagaaatagcatatacataagcactt 5373158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 8445263 - 8445219
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||    
T  8445263 tttattttatcttttgttataaaaatagcttataaacaagcactt 8445219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 28440516 - 28440464
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||| |||||| |||||||||||||||| ||  ||||||||||||    
T  28440516 ttatacgaaaaccatttgactttattttatcttttgttactgaaatagcttat 28440464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 43152982 - 43153030
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||| | |||||||||||||||| |||||||||||||||||||    
T  43152982 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 1417261 - 1417206
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||| |||||| |||||||||||||||| |||| |||||| |||||||    
T  1417261 ttatatgaaaacaatttgactttattttatcttttgttatataaatagtttataca 1417206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 5006582 - 5006637
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||||||  ||||| |||||||||||||||| ||||| |||||||||||||    
T  5006582 ttatatgaaaacagtttgactttattttatcttttgttataggaatagcttataca 5006637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 20476596 - 20476635
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  20476596 atttgaatttattttatcttttgcaatagaaataacttat 20476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 23214878 - 23214831
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||||||||||  |||| ||||||||||| |||||||||||||||||    
T  23214878 gaaaactatttgcctttagtttatcttttgttatagaaatagcttata 23214831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 28613599 - 28613662
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||| |||||| ||||| |||| | ||| |||||||||||| |||| ||||||||||||||    
T  28613599 cttataacttatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttataca 28613662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 31341177 - 31341130
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||||||||||||| |||| |||||||||||||| |||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 32730303 - 32730378
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| ||| |||||||| | |||||||||||| |||||| || ||||||||||||| | | ||||||| ||||||    
T  32730303 cttatgaaaacagcttatcagttatacgaaaacaatttgatttgattttatcttttgttgtcgaaatagtttatac 32730378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 34083577 - 34083644
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 244  Q
    ||||| ||| |||||||||  ||||||  |||| |||| | |||||||||||||||||||||||||||    
T  34083577 cttatgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaata 34083644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 40689048 - 40689107
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagc 246  Q
    |||||||||  ||||| |||||  |||| | |||||||||||||||||||||||||||||    
T  40689048 cagcttatagcttatatgaaaataatttaactttattttatcttttgctatagaaatagc 40689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 1423129 - 1423079
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||||||||| |||  |||||||||||||| || |||||    
T  1423129 tttgaatttattttatcttttgttatgaaaatagcttatacataatcactt 1423079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 5276207 - 5276157
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||| |||||||||| |||| |||||||||||||| ||||||||    
T  5276207 tttgactttatgttatcttttgttataaaaatagcttatacataagcactt 5276157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 6824926 - 6824860
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||| || ||| ||||| |||| | ||| || ||||||||| |||||||||||||||||||    
T  6824926 cagcttataacttgtactaaaacaatttaactttgttctatcttttgttatagaaatagcttataca 6824860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 7453484 - 7453526
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| ||||||||||||||||||||||||| | ||||||||    
T  7453484 atttgactttattttatcttttgctatagaaaaatcttataca 7453526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 12834996 - 12835058
Alignment:
Q  184 aatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagc 246  Q
    ||||||||||||  | ||| |||||| |||||| |||||||||||||||| | ||||||||||    
T  12834996 aatcagcttatagctaatatgaaaacaatttgactttattttatcttttgttgtagaaatagc 12835058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 246
Target Start/End: Complemental strand, 19123232 - 19123198
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagc 246  Q
    |||||||||||||||||||||| ||||||||||||    
T  19123232 tttgaatttattttatcttttgatatagaaatagc 19123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 30535708 - 30535626
Alignment:
Q  49 aattgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||||||||||||||||| || |||||| ||  | |||| ||| | |||||  ||||| ||||||||||||| ||||    
T  30535708 aattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgatatgt 30535626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 35808999 - 35809041
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||| ||||||||||||||||||| || |||||    
T  35808999 tattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 49060524 - 49060482
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||||||||| ||||| |||||||||||||||||||    
T  49060524 atttgactttattttattttttgttatagaaatagcttataca 49060482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 2223138 - 2223081
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| |||  ||||||||||| ||||||||||||||||||| || |||||    
T  2223138 aaaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacactt 2223081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 3501031 - 3501100
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||| |||||| |||||  |||||| |||||||||||||||  |||| || ||||||||||| |||||    
T  3501031 cttatattttatatgaaaatgatttgactttattttatcttttattatataattagcttatacataagca 3501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 3610836 - 3610877
Alignment:
Q  221 attttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||| | ||||||||||||||||| ||||||||    
T  3610836 attttatcttttgttgtagaaatagcttatacataagcactt 3610877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 4591524 - 4591475
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||||||||||||| |||||| |||||||||||| || |||||    
T  4591524 ttgaaattattttatcttttgttatagagatagcttatacataaacactt 4591475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 5715111 - 5715164
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||||| | ||||| |||||||||||||| | |||||||||||||||||    
T  5715111 ttataagaaaattgtttgactttattttatctttcgttatagaaatagcttata 5715164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 12110378 - 12110305
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| |||||||||  |||||| ||||| |||||| ||||||||||||| ||  |||||||||| ||||    
T  12110378 cttatgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatagaaataggttat 12110305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 27626211 - 27626252
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||||||||| |||||| |||||||||||||||||||    
T  27626211 tttgactttattttagcttttgatatagaaatagcttataca 27626252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 28165081 - 28165024
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| || ||||||||||||| |||||||| | |||||||| ||||||||    
T  28165081 aaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactt 28165024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 39539834 - 39539895
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||| |||||||||||||||  |||||  ||| ||||||||||||||| |||||    
T  39539834 ttatatgaaaacaatttgaatttattttcacttttattatcgaaatagcttatacaaaagca 39539895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 45593792 - 45593853
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| ||||||  ||||| |||||||||| ||||| || |||||||||||||||| |||||    
T  45593792 ttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagca 45593853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 48470062 - 48469989
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| || |||||| | ||||| ||||| |||| | || ||||||||||||||| ||||||||||||||    
T  48470062 cttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatcttttgctgtagaaatagcttat 48469989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 2767257 - 2767305
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  2767257 gaaaacaatttatatttattttatcttttgttatagaaatagattatac 2767305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 22388001 - 22388041
Alignment:
Q  222 ttttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| |||||||||||||||| || ||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcactt 22388041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 22759204 - 22759132
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctta 249  Q
    ||||| |||||||||| ||  ||||| |||||| ||||   |||||||||||||||| |||| ||||||||||    
T  22759204 cttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagctta 22759132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 30160977 - 30161013
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagctt 248  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  30160977 tttgactttattttatcttttgccatagaaatagctt 30161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 35266903 - 35266843
Alignment:
Q  191 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||||||| |||||  |||| | ||||||| ||| |||| |||||||||||||||||    
T  35266903 ttataatttatatgaaaaaaatttaactttatttaatcatttgttatagaaatagcttata 35266843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 43318601 - 43318653
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| || ||| |||||| ||||||||||| |||| ||||||||||||||||    
T  43318601 ttatatgataacaatttgactttattttatcatttgttatagaaatagcttat 43318653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 46213780 - 46213736
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||| ||||| |||||||||||||| |||| ||||||||    
T  46213780 tttattttatattttgttatagaaatagcttttacataagcactt 46213736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 402595 - 402674
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||| |||||||||| |||||||||||| |||| ||||||  ||||||||| |||||||||||||||||||| ||||    
T  402595 ttataaaaacagcttataacttatacgaaaacaatttaaattta-attatctttttctatagaaatagcttatacataagc 402674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 20192663 - 20192743
Alignment:
Q  182 aaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||||||  ||||| ||||||| ||||| |||||||||||||||| |||| |||||||||||||| ||||||||    
T  20192663 aaaaacagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactt 20192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 16073105 - 16073168
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||||  ||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  16073105 cagcttataacatatacaaaaactatttaaattaattttaacttttgctatagaaatagcttat 16073168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 1395668 - 1395604
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||  |||||| |||||||||||||||| ||||||||||||||||||| | ||||||    
T  1395668 ttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcactt 1395604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 30956700 - 30956751
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||||| |||| | |||||||||||||||||||||||||||||||||    
T  30956700 tatacaaaaacaatttaactttattttatcttttgctatagaaatagcttat 30956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 30972512 - 30972563
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||||| |||| | |||||||||||||||||||||||||||||||||    
T  30972512 tatacaaaaacaatttaactttattttatcttttgctatagaaatagcttat 30972563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 31053153 - 31053216
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||||||| |||||||||||  | |||| |||||||||||||||| |||||| ||||||||||    
T  31053153 agcttataacttatacgaaaataaattgattttattttatcttttgttatagatatagcttata 31053216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 36783386 - 36783457
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 248  Q
    ||||| ||| ||||| ||| |||||| |||||| |||| | |||||||||||||||| ||||||||||||||    
T  36783386 cttatgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctt 36783457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 44061117 - 44061151
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||||||||||||||||||||    
T  44061117 ttattttatcttttgctatagaaatagcttataca 44061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 44374723 - 44374781
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||||| |||||||||||||||| || ||| |||||||||||| ||||||||    
T  44374723 gaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcactt 44374781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 15304419 - 15304472
Alignment:
Q  197 tttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||| |||||| |||| | |||||||||||||||| ||||||||||||||||    
T  15304419 tttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 41028939 - 41028988
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||||| ||||||| ||||||||||||||||||| ||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcactt 41028988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 45535345 - 45535410
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| |||||||||||||| ||||    
T  45535345 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagcttctaca 45535410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 49586989 - 49587042
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||||||  ||||| |||||||||||||||| |||||||||||||||||    
T  49586989 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 2128331 - 2128379
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||| | |||||||||||||||| |||||||||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttataca 2128379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 24268242 - 24268294
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    ||||| || |||||| |||||||||||||||||| ||||||| ||||||||||    
T  24268242 tttgacttgattttaacttttgctatagaaatagtttatacataagcacttgt 24268294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 30666337 - 30666293
Alignment:
Q  210 tatttgaatttattttatc-ttttgctatagaaatagcttataca 253  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  30666337 tatttgaatttattttatctttttgttatagaaatagcttataca 30666293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 37689210 - 37689178
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||||||||||||||||||||||||    
T  37689210 tttattttatcttttgctatagaaatagcttat 37689178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 38462277 - 38462225
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||| ||||||  ||||| |||||||||||||||| |||||||||||||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaatagcttata 38462225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 905058 - 905097
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatac 905097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 3182424 - 3182499
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| ||||| || || |||||| |||||| ||||||||||||||| |||||||| || |||||||| || |||||    
T  3182424 cagcctataacttgtatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataaacactt 3182499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 16790442 - 16790493
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||||||||||| ||| |||| |||||||||||||| ||||||||    
T  16790442 atttgattttattttatctgttgttataaaaatagcttatacataagcactt 16790493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 25964430 - 25964375
Alignment:
Q  207 aactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| ||| |||||||||||||||||| |||| |||||||||||||| ||| ||||    
T  25964430 aactgtttcaatttattttatcttttgttataaaaatagcttatacaaaagaactt 25964375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 32703135 - 32703080
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||| |||||| |||||||||||||||   ||||||||||||||||||    
T  32703135 ttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttataca 32703080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 37273240 - 37273197
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacatgt 37273197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 42809298 - 42809243
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||| |||| | | |||||||||||||| |||||||||||||||||||    
T  42809298 ttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttataca 42809243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 43115162 - 43115119
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||    
T  43115162 gtgagattgtttggaagagtttatggaaacaacttatgacatgt 43115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 8142801 - 8142847
Alignment:
Q  216 aatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||||| |||| |||||||||||||| || |||||    
T  8142801 aatttattttatcttttgatataaaaatagcttatacataaacactt 8142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 12923412 - 12923462
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||  || || ||||||||||||||||||||||    
T  12923412 tttgactttattttatcttttattacagcaatagcttatacacaagcactt 12923462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 32095255 - 32095317
Alignment:
Q  189 gcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||||| ||||||| ||||| |||| | || ||||||||||||| |||||||||| ||||||    
T  32095255 gcttatagtttatacaaaaacaatttaacttaattttatcttttgttatagaaataacttata 32095317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 34638037 - 34638091
Alignment:
Q  198 ttatacgaaaactatttgaattta-ttttatcttttgctatagaaatagcttata 251  Q
    |||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||    
T  34638037 ttatacgaaaacaatttaactttaattttatctttttctatagaaatagcttata 34638091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 43116501 - 43116567
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    ||||| ||||| | ||||| || ||||||||||||| ||||||||||||||| ||| || |||||||    
T  43116501 ttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgt 43116567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 46778307 - 46778353
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||| | |||||||||||| |||||||||||||||||||||    
T  46778307 aaaacaatttaactttattttatctcttgctatagaaatagcttata 46778353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 1810088 - 1810047
Alignment:
Q  349 cacttgtgagactatctgagagagcttaaggaaacagcttat 390  Q
    ||||||||||||||| |||||||||||| ||||||| |||||    
T  1810088 cacttgtgagactatttgagagagcttacggaaacaacttat 1810047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 21862248 - 21862313
Alignment:
Q  198 ttatacgaaaactatttgaatt-tattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| |||||| || ||||||||||||||  ||||||| ||||||||| |||||||||    
T  21862248 ttatatgaaaacaatttgacttgtattttatcttttgtaatagaaacagcttatacgcaagcactt 21862313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 24235770 - 24235815
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaag 257  Q
    ||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  24235770 tttgactttatattatcttttgttatagaaataacttatacacaag 24235815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 24684875 - 24684948
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||| || ||||||   ||||| ||||| |||  ||||||||||||||||| ||||| |||||||||||    
T  24684875 cttataaaagcaacttatagcatatacaaaaacaattaaaatttattttatctttttctataaaaatagcttat 24684948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 34318072 - 34318031
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||||| |||||||||| ||||| ||||||||||||||||||    
T  34318072 atttgactttattttatattttgttatagaaatagcttatac 34318031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 39602262 - 39602334
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| |||||||||| ||||||| || | |||| | ||||| ||||||||| |||||||||||||||||    
T  39602262 cttatgaaaacagcttataacttatacgcaa-caatttaactttatgttatctttttctatagaaatagcttat 39602334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 40122839 - 40122880
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||||||||||||| ||| |||||||||||||||    
T  40122839 tttgactttattttatcttttgttattgaaatagcttataca 40122880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 48364958 - 48365007
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||||| |||||||||||||||| ||| |||||| ||||||||    
T  48364958 gaaaacaatttgactttattttatcttttgttatcgaaataacttataca 48365007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 52619011 - 52618946
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||||||||| ||||| |||||| |||| | ||||||| ||| |||| | ||||||||||||||||    
T  52619011 cagcttataacttatatgaaaacaatttaactttatttaatcatttgttttagaaatagcttatac 52618946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 8007782 - 8007834
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    ||||| |||| ||||||||||| |||||||| |||||||||| |||| |||||    
T  8007782 tttgactttactttatcttttgttatagaaacagcttatacataagcccttgt 8007834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 10101549 - 10101601
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| |||||| |||| | |||||||||||||||| |||||||||| |||||    
T  10101549 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 10212474 - 10212526
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| |||||| |||| | |||||||||||||||| |||||||||| |||||    
T  10212474 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 16790181 - 16790225
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||| |||||| | ||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcactt 16790225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 25447296 - 25447364
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    ||||| ||| ||| |||||  |||||| ||||| |||| | ||||||||||||||| ||||||||||||    
T  25447296 cttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaatag 25447364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 33405219 - 33405287
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    ||||| ||| |||||||||  ||||| |||||| | || | ||||||||| ||||||||||||||||||    
T  33405219 cttatgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaatag 33405287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 34254896 - 34254936
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| ||||||||||| ||||||| |||||||||||||||    
T  34254896 tttgactttattttatcatttgctacagaaatagcttatac 34254936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 36189584 - 36189508
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||  ||||||||   ||||| ||||| |||| | ||||||||||||||||  | ||||||||||||||||    
T  36189584 cttataaaaatagcttatatcatatacaaaaacaatttaactttattttatcttttgtaagagaaatagcttataca 36189508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 36646448 - 36646508
Alignment:
Q  191 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| ||||| |||||| |||  | ||||||||||||||||  ||||||||||||||||    
T  36646448 ttataacttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttata 36646508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 42039136 - 42039092
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||| ||||| || |||||||||||||||| ||||||||    
T  42039136 tttattttattttttgttacagaaatagcttatacataagcactt 42039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 52413214 - 52413258
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||||||| |||| |||||||||||||| ||||||||    
T  52413214 tttattctatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 3537104 - 3537159
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  3537104 ttatacgaaaacaatttgactttattttatcttttgctatagaaattgcttataca 3537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 10727214 - 10727130
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| || ||||||| ||||  ||||||  ||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  10727214 cttataaaa-caacttataacttatgtgaaaacactttgaatttatttcatcttttgctatagaaatagcttatgcataagcactt 10727130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 10114466 - 10114423
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataagcactt 10114423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 13652233 - 13652148
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| ||  |||||| ||||| |||||| |||| | || |||  |||||||||||||||||||||||||||| ||||||||    
T  13652233 cttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcactt 13652148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 13710876 - 13710791
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| ||  |||||| ||||| |||||| |||| | || |||  |||||||||||||||||||||||||||| ||||||||    
T  13710876 cttataaaaacaatttataacttatatgaaaacaatttcacttcattccatcttttgctatagaaatagcttatacataagcactt 13710791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 14482192 - 14482135
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| |||||||||||||||| ||||||||||| ||||||| ||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcactt 14482135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 6950466 - 6950374
Alignment:
Q  50 attgacttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgtagataatttgt 142  Q
    ||||||||||||||||| || || || |||||| |   |||||||||| |||||||| ||||| ||||||| |||||||||| ||||| ||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgt 6950374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 27465367 - 27465315
Alignment:
Q  201 tacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||||||||    
T  27465367 tacgaaaacagtttgatttgattttatcttttgctatagaaatagcttataca 27465315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 9700009 - 9699943
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||  |||||| ||||||  |||||||| |||||| ||| |||||||||||||||    
T  9700009 cagcttataatttatttgaaaacaatttgaccttattttaacttttgttatcgaaatagcttataca 9699943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 29056064 - 29056130
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    ||||| |||||| | |||| |||||||||||||||||| ||||| ||||||||||| || |||||||    
T  29056064 ttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacataaacacttgt 29056130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 42597392 - 42597334
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||| | |||||||||||||||| ||||||||||||||||||| ||| ||||    
T  42597392 gaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtactt 42597334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 11000634 - 11000687
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||| ||||||| |||||| |||||||||||||||| ||| |||||||||||||    
T  11000634 ttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttata 11000687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1112829 - 1112785
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatacacaagcacttg 263  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||    
T  1112829 ttattttatcttttgttatagaaatagcatatacataagcacttg 1112785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 1930028 - 1929980
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcacttgtgc 266  Q
    ||||||||||||||| ||||||||||| |||||||| |||| |||||||    
T  1930028 tttattttatctttttctatagaaataacttatacataagcgcttgtgc 1929980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 14280474 - 14280534
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||| |||||| |||| | || ||||||||||||||||||||||||| ||||||| ||||    
T  14280474 ttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataagc 14280534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 26215493 - 26215433
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||   ||| | |||||||||||||||| ||||||||||||||||||| ||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataagc 26215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 250
Target Start/End: Original strand, 29168145 - 29168177
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||||||||||||||||||||||||    
T  29168145 tttattttatcttttgctatagaaatagcttat 29168177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 30191072 - 30191148
Alignment:
Q  55 cttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||||| || ||||| |||||  ||  || ||| ||| |||||||| ||||||||||||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgt 30191148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 32976407 - 32976359
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||| | |||||||||||||||| |||||||||||| ||||||    
T  32976407 aaaactatttaactttattttatcttttgttatagaaatagcgtataca 32976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 35374425 - 35374493
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    ||||| ||||||| |||||  ||||| |||||| |||| | |||||||||||||| |||||||||||||    
T  35374425 cttatgaaatcagattatagcttatatgaaaacaatttaactttattttatctttcgctatagaaatag 35374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 37444488 - 37444548
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||| |||| | |||| ||||||||||| ||||| ||||||||||||| ||||    
T  37444488 ttatacgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagc 37444548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 1470909 - 1470984
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| ||| |||||||||  ||||| ||||   |||||| |||||||||||||||  |||||||||||||||||||    
T  1470909 ttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttataca 1470984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 250
Target Start/End: Original strand, 13561378 - 13561437
Alignment:
Q  191 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||||| |||||| |||||| ||||||| || || || ||||||||||||||||    
T  13561378 ttataatttatatgaaaacaatttgactttatttaattttctgttatagaaatagcttat 13561437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 13822120 - 13822171
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| |||||||||| || ||| ||||||||||||||| ||||||||||||    
T  13822120 tatacaaaaactatttaaagttagtttatcttttgctattgaaatagcttat 13822171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 40071855 - 40071812
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  40071855 gtgagagtgtttgggagagcttatggaaacaacttatgacatgt 40071812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 41475133 - 41475188
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||| |||| | | ||||||||||||||||||| || |||||||||||    
T  41475133 ttatacgaaaacaatttaactgtattttatcttttgctataaaattagcttataca 41475188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 2364559 - 2364601
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| ||||||||||||||||||||| ||||||| ||||||    
T  2364559 atttgactttattttatcttttgctataaaaatagcgtataca 2364601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 3645903 - 3645953
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| |||||| ||||  ||||||||||||||||||||||||||||    
T  3645903 tttgattttgttttatattttcttatagaaatagcttatacacaagcactt 3645953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 9540971 - 9541017
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgtagataatttgtgtt 145  Q
    |||||||| ||||||||||| ||||||||||||  ||||||||||||    
T  9540971 tgggagagcttatggaaacatcttatgacatgtccataatttgtgtt 9541017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 11795110 - 11795028
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||||||||||| ||||| ||||||  | ||| |||||| ||| |||||  ||||||| |||||||||| |||||    
T  11795110 cttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgttttgtcatagaaaaagcttatacataagca 11795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 35298557 - 35298615
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| ||||  |||||||||||||||| ||  ||||||||||||||| ||||||||    
T  35298557 gaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcactt 35298615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 250
Target Start/End: Original strand, 9541071 - 9541100
Alignment:
Q  221 attttatcttttgctatagaaatagcttat 250  Q
    ||||||||||||||||||||||||||||||    
T  9541071 attttatcttttgctatagaaatagcttat 9541100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 31915348 - 31915397
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||||| |||||| ||||||||| |||||| ||||||||||||    
T  31915348 gaaaacaatttgactttattctatcttttgttatagatatagcttataca 31915397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 33209272 - 33209345
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||  |||||||| |||||| ||||||  || || ||||||||||||||   ||||||||||||||||    
T  33209272 cttataaaaatagcttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagcttat 33209345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 35534933 - 35534998
Alignment:
Q  197 tttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| |||||  ||||| ||||||||| |||||  ||||||||||||||||| | ||||||||    
T  35534933 tttatacaaaaacagtttgactttattttaacttttattatagaaatagcttatatataagcactt 35534998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 35869855 - 35869770
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| || ||||||  ||||| ||||| | |||||||||||||||| ||||| | ||||||| ||||||||| ||| ||||    
T  35869855 cttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaactt 35869770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 38036192 - 38036249
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||||||||||||||| ||||| || | |||||| ||||||| ||||||||    
T  38036192 aaaacaatttgaatttattttattttttgttaaataaatagtttatacataagcactt 38036249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 39392748 - 39392789
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||||||||||||||| ||||||||||| |||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttataca 39392789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 43718023 - 43718056
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttata 251  Q
    ||||||||||||||||| ||||||||||||||||    
T  43718023 tttattttatcttttgcgatagaaatagcttata 43718056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 4558775 - 4558731
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||  ||||||||||||||||||| || |||||    
T  4558775 tttattttatcttttattatagaaatagcttatacataaacactt 4558731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 7646203 - 7646139
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||| |||| | ||||||||| |||||  ||||||||||||||||||| || |||||    
T  7646203 ttatacaaaaacaatttaactttattttaccttttcttatagaaatagcttatacataaccactt 7646139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 11188248 - 11188292
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcactt 11188292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 11569416 - 11569472
Alignment:
Q  349 cacttgtgagactatctgagagagcttaaggaaacagcttattgcatgttcataagt 405  Q
    ||||||||||||| | | |||||||||| |||||||||||||  ||||| |||||||    
T  11569416 cacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagt 11569472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 12976190 - 12976158
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    |||||||||| ||||||||||||||||||||||    
T  12976190 tttattttatattttgctatagaaatagcttat 12976158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 264
Target Start/End: Complemental strand, 14949863 - 14949819
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagcacttgt 264  Q
    |||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  14949863 tattttatcttttgttatagaagtagcttatacataagaacttgt 14949819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 252
Target Start/End: Complemental strand, 26820182 - 26820142
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  26820182 tttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 29699262 - 29699190
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||| ||| | || |||  ||||| |||||||||||||||| |||||||||| ||| |||| |||||    
T  29699262 cagcttataacttagatgacaacattttgactttattttatcttttgttatagaaataacttgtacataagca 29699190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 36151571 - 36151633
Alignment:
Q  191 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||||||||||| |||||| |||||||||||||||| ||| |||||||||||||||    
T  36151571 ttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttataca 36151633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 49517088 - 49517009
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaa 256  Q
    ||||| ||| |||||||||  ||| | |||||| |||||| |||||||||||||||| |||||||||| |||||||||||    
T  49517088 cttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaa 49517009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 40304107 - 40304181
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||| ||| |||||||||| ||||| |||||| || ||| |||||||||||||||| |||| |||||||||||||    
T  40304107 ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatac 40304181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 17628614 - 17628549
Alignment:
Q  180 ataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatag 245  Q
    |||||| |||||||||||||||| |||||| |||||| |||| ||||||||||  |||||||||||    
T  17628614 ataaaaacagcttataatttatatgaaaacaatttgactttactttatcttttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 23895319 - 23895278
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  23895319 tttgaatttattttatcttttgttatagaaatagcttataca 23895278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 10233703 - 10233763
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||| | ||||| |||||| |||||||||||| ||||||||| ||||||||||||    
T  10233703 ttatacgaaagcaatttgcatttatgttatcttttgctgtagaaatagtttatacacaagc 10233763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 27145800 - 27145863
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||| |||||||||||  |||| |||||||||||||| ||| | |||||||||||||||||    
T  27145800 cttataaattatacgaaaataatttaaatttattttatctgttgttgtagaaatagcttataca 27145863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 262
Target Start/End: Complemental strand, 6659677 - 6659636
Alignment:
Q  221 attttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  6659677 attttatcttttgctatagaaatagtttatacataagcactt 6659636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 7028269 - 7028228
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  7028269 tttattttatcttttgctatagaaatagtttatacataagca 7028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 43029488 - 43029537
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcact 261  Q
    |||||||||||||||||||||| | ||||||||| ||||||| |||||||    
T  43029488 tttgaatttattttatcttttgttgtagaaataggttatacataagcact 43029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 46499934 - 46499991
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||| |||||||||||||||  ||||||||||||||||| | ||||||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcactt 46499991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 50319283 - 50319234
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| | |||| |||||||||||||||| |||||||||||||||||||    
T  50319283 gaaaacaacttgactttattttatcttttgttatagaaatagcttataca 50319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 3887725 - 3887765
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  3887725 tttattttatcttttgctattgaaatagcttatacataagc 3887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 4768917 - 4768961
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||    
T  4768917 tttattttatcttttggtatagcaatagcttatacataagcactt 4768961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 9572172 - 9572236
Alignment:
Q  189 gcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||  |||||| ||| | |||| | |||||||||||||||||||||||||||||| |||||    
T  9572172 gcttatagcttatacaaaagcaatttaactttattttatcttttgctatagaaatagctaataca 9572236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 23544713 - 23544773
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||| |||||| |||||| || |||||||||||| | |||||||||||||||||| ||||    
T  23544713 ttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagc 23544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 27146316 - 27146376
Alignment:
Q  193 ataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| ||||||||||   |||| |||||||||||||||||||| |||||||| ||||||||    
T  27146316 ataacttatacgaaactaatttaaatttattttatcttttgctgtagaaataccttataca 27146376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 47877129 - 47877073
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaata 244  Q
    |||||||| |||||| |||||| |||||| |||||||||||||||| ||| ||||||    
T  47877129 agcttatagtttatatgaaaacaatttgattttattttatcttttgttattgaaata 47877073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 51190868 - 51190808
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 248  Q
    ||||||||| |||||| ||||| |||| | |||||||||||||||||| || |||||||||    
T  51190868 agcttataacttatacaaaaacaatttaactttattttatcttttgctttacaaatagctt 51190808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 289224 - 289173
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||||||||||||||||| | |||||||||||||  ||||||||    
T  289224 atttgactttattttatcttttgctacaaaaatagcttatacttaagcactt 289173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 11560629 - 11560676
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| |||||| || |||||||||||||||||| |||||||||||||    
T  11560629 aaaacaatttgatttgattttatcttttgctataaaaatagcttatac 11560676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Complemental strand, 13037836 - 13037797
Alignment:
Q  223 tttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcactt 13037797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 23373277 - 23373320
Alignment:
Q  88 gtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  23373277 gtgagattgtttgggagagcttatagaaacaacttatgacatgt 23373320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 29046011 - 29046050
Alignment:
Q  223 tttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  29046011 tttatcttttgttatagaaatatcttatacacaagcactt 29046050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 251
Target Start/End: Complemental strand, 29904738 - 29904703
Alignment:
Q  216 aatttattttatcttttgctatagaaatagcttata 251  Q
    ||||||||||||||||||||||| ||||||||||||    
T  29904738 aatttattttatcttttgctataaaaatagcttata 29904703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 36643110 - 36643145
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36643110 tttattttatcttttgctatacaaatagcttataca 36643145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 37841995 - 37841940
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||| |||| | ||||||||||| |||| ||||| |||||||||||||    
T  37841995 ttatacgaaaacaatttaactttattttatcatttgttataggaatagcttataca 37841940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 37842448 - 37842483
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37842448 tttatttcatcttttgctatagaaatagcttataca 37842483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 38883008 - 38883047
Alignment:
Q  223 tttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  38883008 tttatcttttgctatagaaatagcttatgtacaagcactt 38883047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 4777378 - 4777412
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatac 252  Q
    ||||||||||||||||||||||||||| |||||||    
T  4777378 tttattttatcttttgctatagaaataacttatac 4777412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 5756751 - 5756813
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||||||||||| ||||||  ||| | ||||| | |||||||| ||||||||||||||||||    
T  5756751 cttataatttatatgaaaacagtttaactttatatcatcttttgttatagaaatagcttatac 5756813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 15687146 - 15687196
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagctt 248  Q
    |||||||||||| |||| | |||||||||| ||||| ||||||||||||||    
T  15687146 ttatacgaaaacaatttaactttattttatattttgttatagaaatagctt 15687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 38651488 - 38651546
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||| || |||| ||||||||||| ||||||| ||||||||||| ||||||||    
T  38651488 gaaaacaattcgactttagtttatcttttgttatagaattagcttatacataagcactt 38651546  T

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Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 253
Target Start/End: Complemental strand, 45145202 - 45145168
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||||| ||||||||||||||    
T  45145202 ttattttatcttttgctataaaaatagcttataca 45145168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 45999375 - 45999425
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||| |||||||||| |||||||||||||||||||  |||||||    
T  45999375 tttgactttatcttatcttttgttatagaaatagcttatacatgagcactt 45999425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 48064327 - 48064261
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaat 243  Q
    ||||| |||||| ||||||| |||||| ||||   ||| | ||||||||||||||||||||||||||    
T  48064327 cttatgaaatcaacttataacttatacaaaaatagttttactttattttatcttttgctatagaaat 48064261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 49557128 - 49557074
Alignment:
Q  208 actatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| | |||||||||||||||| |||||||||| ||||||||  |||||||    
T  49557128 actatttaactttattttatcttttgttatagaaataacttatacagcagcactt 49557074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 172318 - 172277
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||||||| | ||||||||||||||||||| |||||    
T  172318 tttattttatctttagttatagaaatagcttatacataagca 172277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 1432490 - 1432457
Alignment:
Q  220 tattttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||| ||||||||||||||||||||    
T  1432490 tattttatcttttactatagaaatagcttataca 1432457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 4549843 - 4549802
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||||||||| |||||||||||||| |||| |||||    
T  4549843 tttattttatcttttgttatagaaatagcttgtacataagca 4549802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 14737784 - 14737829
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagctta 249  Q
    |||||| |||||| |||||||||||||||| |||||||||| ||||    
T  14737784 gaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 15360891 - 15360826
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttg 263  Q
    ||||| ||||||  ||||| |||||||||||||||| |||||||||| || ||||| || ||||||    
T  15360891 ttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacacttg 15360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 24915103 - 24915176
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| |||||||||   ||||| ||||| |||| | ||||||||||||| |||||||||||||| ||||    
T  24915103 cttatgaaaacagcttatagcatatacaaaaacaatttaactttattttatcttctgctatagaaatagtttat 24915176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 28689527 - 28689580
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| | ||| ||||||||||||||||| ||||||||||| |||||    
T  28689527 ttatatgaaaaccacttgcatttattttatcttttgatatagaaatagtttata 28689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 29793800 - 29793715
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || ||| ||||||  |||||||||||| | || | ||||| |||||||||| | |||||||||||| |||| ||||||||    
T  29793800 cttatgaactcaacttatagcttatacgaaaacaacttaactttatgttatcttttgttgtagaaatagcttgtacataagcactt 29793715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 33527199 - 33527272
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| ||| |||||||||  ||||| ||||||  ||||| | |||||||||||||| | ||||||||||||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttat 33527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 34619451 - 34619512
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||| ||||| |||| |  ||||||||||||||| ||||||||| ||||||||| |||||    
T  34619451 ttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataagca 34619512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 40357965 - 40358014
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||||| |||||||||||  ||| |||||||||||||||||||    
T  40357965 gaaaacaatttgactttattttatccattgttatagaaatagcttataca 40358014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 266
Target Start/End: Complemental strand, 488962 - 488930
Alignment:
Q  234 ctatagaaatagcttatacacaagcacttgtgc 266  Q
    |||||||||||||||||||| ||||||||||||    
T  488962 ctatagaaatagcttatacataagcacttgtgc 488930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 1255493 - 1255565
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||| || || |||||  |||||| || |||| ||||||| ||||||||||||||| |||| |||||    
T  1255493 cagcttataacttgtatgaaaagaatttgacttcatttcatcttttactatagaaatagcttctacataagca 1255565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 7069319 - 7069243
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttatttt-atcttttgctatagaaatagcttatac 252  Q
    |||| |||| |||||||||  |||||||||||| |||  | ||| |||| |||||||||||||| ||||||||||||    
T  7069319 cttacaaaagcagcttatagcttatacgaaaacaattcaattttttttttatcttttgctatagtaatagcttatac 7069243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 7472319 - 7472256
Alignment:
Q  187 cagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||||  |||||| ||||| |||| || ||||| ||||||||| |||||||||||||||||    
T  7472319 cagcttatagattatacaaaaacaattt-aacttattatatcttttgttatagaaatagcttata 7472256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 28467528 - 28467496
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||||||||||||| ||||||||||||||    
T  28467528 tgggagagattatggaaataacttatgacatgt 28467496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 253
Target Start/End: Original strand, 33339516 - 33339548
Alignment:
Q  221 attttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||| |||||||||||||||||||    
T  33339516 attttatcttttggtatagaaatagcttataca 33339548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 36641859 - 36641819
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| |||||||||||||||| |||||||||| ||||||    
T  36641859 atttgactttattttatcttttgttatagaaataacttata 36641819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 38867907 - 38867959
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||| ||||||  ||||| ||||||| |||||||| |||||||||||||||||    
T  38867907 tatatgaaaacattttgactttatttaatcttttggtatagaaatagcttata 38867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 42397740 - 42397696
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||| ||||| || |||||||||||||||| ||||||||    
T  42397740 tttattttatgttttgttacagaaatagcttatacataagcactt 42397696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 43722408 - 43722456
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcacttgtgc 266  Q
    ||||||||||||| || |||| |||||||||||||| |||| |||||||    
T  43722408 tttattttatcttctgttatataaatagcttatacataagcgcttgtgc 43722456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 48748662 - 48748717
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcac 260  Q
    |||||| |||| | ||||||| |||||||| ||||||||||||||||||| ||||||    
T  48748662 gaaaacaatttaactttatttcatcttttg-tatagaaatagcttatacataagcac 48748717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 27581 - 27509
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||||| |||||| |||||| ||||||||||||| || |||||||||| |||||||| ||||||||    
T  27581 cttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcactt 27509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 21351 - 21406
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||| |||| | ||||||||||||||| ||||| ||||||||||||||    
T  21351 ttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttataca 21406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 262
Target Start/End: Complemental strand, 4026834 - 4026750
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| ||| ||||||||||||||| | ||||  |||| | ||||||||||||||||||||| |||||||||||| | ||||||||    
T  4026834 ttatgaaaacagcttataatttatgcaaaaataatttaactttattttatcttttgctataaaaatagcttatagataagcactt 4026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 35459907 - 35459843
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| |||||| |||||||||||||||| |||| |||||||||||||| || |||||    
T  35459907 ttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcactt 35459843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 26143734 - 26143773
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaag 257  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26143734 tttattttatcttttgctatagaaatagcttatacacaag 26143773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 44600538 - 44600472
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatctttt--gctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||||||||| | |||||||||||||||  ||||||||||||||||||||| ||||||||    
T  44600538 ttatatgaaaactatttaactttattttatctttttggctatagaaatagcttatacataagcactt 44600472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 656829 - 656903
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| |||| |  |||||||||||| |||||| | |||||||||||||| |||||||||||||||||    
T  656829 cttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagcttata 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 2416331 - 2416246
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| |||||||||  |||||  ||||| |||| | || |||||||||||||||| ||||||| |||||||| ||||||||    
T  2416331 cttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactt 2416246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 25609810 - 25609729
Alignment:
Q  181 taaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || ||||||  |||||||||||  | |||| |||||||||||||||  ||||||||||||||||||| ||||||||    
T  25609810 taaaaacaacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcactt 25609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 43259831 - 43259779
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||| |||||||||||| ||||||||||||| || ||||||||||||||||    
T  43259831 ttatacaaaaactatttgactttattttatcttgtgttatagaaatagcttat 43259779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 3611222 - 3611159
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||| |||| | ||||||||| ||||||||||||||||| |||||||| ||||||||    
T  3611222 tatacaaaaacaatttaactttattttaccttttgctatagaaataacttatacataagcactt 3611159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 11393452 - 11393503
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  11393452 atttgaatttattatatcttttgatatagaaatagcttatagataagcactt 11393503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 11410113 - 11410164
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | ||||||||    
T  11410113 atttgaatttattatatcttttgatatagaaatagcttatagataagcactt 11410164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 5942902 - 5942860
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcac 260  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  5942902 tttattttatcttttgatatagaaatagcttgtacacaagcac 5942860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 28677739 - 28677789
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||||||||||||| | ||| |||||||||||||||||||||||    
T  28677739 tttgactttattttatcttttacaataaaaatagcttatacacaagcactt 28677789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 40837502 - 40837556
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| |||||| |||||| |||| ||||||||||| |||||||||||||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttataca 40837556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 5133749 - 5133708
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  5133749 tttattttatcttttgttatagaaatagcttatacataagca 5133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19629306 - 19629241
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| |||||||||||||| ||||    
T  19629306 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagcttctaca 19629241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 19826207 - 19826142
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||| ||||||  |||||||||||| |||| ||||| ||||| |||||||||||||| ||||    
T  19826207 agcttatactttatataaaaactatttgactttaatttattttttgttatagaaatagcttctaca 19826142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 11393748 - 11393792
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||    
T  11393748 tttattgtatcttttggtatagaaatagcttatacataagcactt 11393792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 11410409 - 11410453
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||    
T  11410409 tttattgtatcttttggtatagaaatagcttatacataagcactt 11410453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 14209274 - 14209210
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||||||  |||||||||||||||||||||| ||| ||||||||||| ||| || |||||    
T  14209274 ttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacactt 14209210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 31461422 - 31461382
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| |||||||||||||||| |||||||||||||||||    
T  31461422 atttgactttattttatcttttgttatagaaatagcttata 31461382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 34054994 - 34055038
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||    
T  34054994 tttattttatcttttgttatagaaatagcctatacataagcactt 34055038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 34339120 - 34339056
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||  | ||| |||||||||||||| |||||||||| || ||||||| ||||||||    
T  34339120 ttatacgaaaacagtctgactttattttatctttagctatagaaaaagtttatacataagcactt 34339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 41033047 - 41033087
Alignment:
Q  222 ttttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataagcactt 41033087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 3100073 - 3100120
Alignment:
Q  206 aaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| |||||||||||||||||||| || |||| ||||||||||||||    
T  3100073 aaacaatttgaatttattttatcttctgatataaaaatagcttataca 3100120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 3102676 - 3102629
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||||||| |||||||||| |||||||||||||| |||||    
T  3102676 tttgactttattttatattttgctataaaaatagcttatacataagca 3102629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 10567180 - 10567121
Alignment:
Q  71 tattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatg 130  Q
    ||||| ||||| ||| ||||||| ||| ||||||||||| |||||||| |||||||||||    
T  10567180 tattgacataagtactcgtgagactgtttgggagagattgtggaaacagcttatgacatg 10567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 13866872 - 13866825
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| || ||||||||||||||||||||||||| ||||||| |||||    
T  13866872 tttgacttaattttatcttttgctatagaaatagtttatacataagca 13866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 17952788 - 17952827
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  17952788 tttgactttattttatcttttgttatagaaatagcttata 17952827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 32098395 - 32098434
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  32098395 tttgactttattttatcttttgttatagaaatagcttata 32098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 32694189 - 32694154
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||| |||||||||||||||||||    
T  32694189 tttattttatcttttgatatagaaatagcttataca 32694154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 39567880 - 39567841
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaag 257  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  39567880 tttattttatcttttgttatagaaatatcttatacacaag 39567841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 10143155 - 10143105
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || ||||||||||||| |||||||||| |||||||| ||||||||    
T  10143155 tttgacttaattttatcttttgttatagaaataacttatacataagcactt 10143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 10739225 - 10739271
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaata 244  Q
    ||||||||||||||||||| |||||||||||  ||||| ||||||||    
T  10739225 ttatacgaaaactatttgactttattttatcagttgctctagaaata 10739271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 11344363 - 11344421
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||||| ||| |||||||||||| |||||||||| ||||| || ||||||||    
T  11344363 gaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcactt 11344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 251
Target Start/End: Complemental strand, 15377783 - 15377709
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| ||| |||||||||| ||||| |||||| || | | ||||||||||| |||| ||||||| |||||||||    
T  15377783 cttatgaaaacagcttataacttatatgaaaacaatctaactttattttatcctttggtatagaagtagcttata 15377709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 265
Target Start/End: Complemental strand, 33192197 - 33192123
Alignment:
Q  191 ttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcacttgtg 265  Q
    |||||| ||||| ||||||  ||||| ||||||||||||| || ||||||||||| || || | |||||||||||    
T  33192197 ttataacttatatgaaaacagtttgactttattttatcttatgttatagaaatagtttttatataagcacttgtg 33192123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 38239638 - 38239688
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || ||||||||||||| ||||||||||||||||||| || |||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacactt 38239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 40759013 - 40758967
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| |||||||||||||||| ||| |||||||||||||    
T  40759013 aaaacaatttgactttattttatcttttgttatggaaatagcttata 40758967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 680167 - 680138
Alignment:
Q  224 ttatcttttgctatagaaatagcttataca 253  Q
    ||||||||||||||||||||||||||||||    
T  680167 ttatcttttgctatagaaatagcttataca 680138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 250
Target Start/End: Complemental strand, 3932340 - 3932295
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||| ||||| | ||||||||||||||||||||||||||| |||||    
T  3932340 aaaattatttaactttattttatcttttgctatagaaataacttat 3932295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 3978534 - 3978485
Alignment:
Q  202 acgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||||| |||| |||||||  ||||||||||||||||||||| |||||    
T  3978534 acgaaaacaatttaaatttatgctatcttttgctatagaaataggttata 3978485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 5045245 - 5045294
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||||||||||||| |||| |||||||||||||| || |||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacactt 5045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 23747299 - 23747246
Alignment:
Q  200 atacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||  |||| |||| ||||||||||||| |||| ||||||||||||||    
T  23747299 atacgaaaataatttaaattcattttatcttttgatataaaaatagcttataca 23747246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 30990462 - 30990507
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcacttg 263  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||||    
T  30990462 tttattttatcatttgttatagaaagagcttatacataagcacttg 30990507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 33197327 - 33197376
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||| ||||||||| ||||||||||||||||| | ||||||||    
T  33197327 ttgactttattctatcttttgttatagaaatagcttatagataagcactt 33197376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 38078368 - 38078425
Alignment:
Q  348 gcacttgtgagactatctgagagagcttaaggaaacagcttattgcatgttcataagt 405  Q
    ||||| ||||||||||||||||||||||| ||||| || | |  ||||||||||||||    
T  38078368 gcactggtgagactatctgagagagcttatggaaatagttaaaggcatgttcataagt 38078425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 42420388 - 42420421
Alignment:
Q  219 ttattttatcttttgctatagaaatagcttatac 252  Q
    |||||||||||||||||||| |||||||||||||    
T  42420388 ttattttatcttttgctataaaaatagcttatac 42420421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 1742007 - 1742039
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  1742007 tgggagagcttatggaaacaacttatgacatgt 1742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 2142630 - 2142590
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||||||| || ||||||||| ||||||||||||||||||    
T  2142630 tttattttacctattgctatagtaatagcttatacacaagc 2142590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 4550842 - 4550810
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  4550842 tgggagagcttatggaaacaacttatgacatgt 4550810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 5759505 - 5759596
Alignment:
Q  54 acttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgtagataatttgtgttt 146  Q
    ||||||||||||| || |||||  |||| |||  |||||| ||| |||||||| ||||||||||| |||| |||||||  |||| ||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccataagttgtgttt 5759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 7928371 - 7928419
Alignment:
Q  202 acgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||| ||| |||||| || |||||||||||||| |||||||||||||||    
T  7928371 acgacaacaatttgatttaattttatcttttgcaatagaaatagcttat 7928419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 9878769 - 9878805
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagctt 248  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  9878769 tttgagtttattttatcttttgttatagaaatagctt 9878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 13864627 - 13864583
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| |||||| ||||||||||||||||||| || |||||    
T  13864627 tttattttaccttttgttatagaaatagcttatacataaacactt 13864583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 15120278 - 15120246
Alignment:
Q  99 tgggagagattatggaaacaacttatgacatgt 131  Q
    |||||||| ||||||||||||||||||||||||    
T  15120278 tgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 18962131 - 18962175
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||||    
T  18962131 tttattttatcttttgttataaaaatagctaatacataagcactt 18962175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 26522717 - 26522761
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||||||| ||||||||||| ||||||| ||||||||    
T  26522717 tttattatatcttttgttatagaaatagtttatacataagcactt 26522761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 36114596 - 36114660
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| ||||| |||| | |||||||||||||||| ||||||| ||| |||| || ||||||||    
T  36114596 ttatacaaaaacaatttaactttattttatcttttgttatagaactaggttatgcataagcactt 36114660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 37053599 - 37053527
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||| ||||| ||||||  ||||| |||||||||| || || |||||||||||  |||||| ||||||||    
T  37053599 cttataacttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcactt 37053527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 262
Target Start/End: Complemental strand, 37766803 - 37766731
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| |||||||||||||  ||||| |||||||||| |||||  |||  ||||||| ||||| ||||||||    
T  37766803 cttatagtttatacgaaaacattttgactttattttattttttgtcatatgaatagctaatacataagcactt 37766731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 41039739 - 41039783
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||||||||||  | |||||||||||||||| ||||||||    
T  41039739 tttattttatcttttgtcacagaaatagcttatacataagcactt 41039783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 41905875 - 41905931
Alignment:
Q  349 cacttgtgagactatctgagagagcttaaggaaacagcttattgcatgttcataagt 405  Q
    ||||| ||||||| |  ||||||||||| | ||||| ||||||||||||||||||||    
T  41905875 cacttatgagactcttcgagagagcttatgaaaacaacttattgcatgttcataagt 41905931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 42457938 - 42457890
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||| | ||||||||||||||| |||||||||||| |||||||    
T  42457938 aaaacaatttaactttattttatcttttactatagaaatagattataca 42457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 3175969 - 3175894
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| ||| |||||||||| |||   |||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  3175969 cttatgaaaacagcttataacttacttgaaaacaatttgactttattttatcttttgctatagaagtagcttatac 3175894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 54325100 - 54325174
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||  ||||| ||||||  ||||| ||||||||||||||||  |||||||||| ||||||||||||||||    
T  54325100 agcttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcactt 54325174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 3155593 - 3155545
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| |||| | ||||||||||||||||||||||||||||||||||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttataca 3155545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 4798652 - 4798696
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  4798652 tttattttatcttttgatatagaaatagcttatacataagcactt 4798696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 42321944 - 42322004
Alignment:
Q  190 cttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||||||| |||||| |||||| ||||||||||| |||| |||| |||||||||||    
T  42321944 cttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttat 42322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 28232529 - 28232478
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||| || |||||||||||||||||||||||||||| ||| |||||||||    
T  28232529 atttgatttgattttatcttttgctatagaaatagcttgtacgcaagcactt 28232478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 34213691 - 34213734
Alignment:
Q  222 ttttatcttttgctatagaaatagcttatacacaagcacttgtg 265  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  34213691 ttttatcttttgctatagaaatagcttatacacacgcatttgtg 34213734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 47970301 - 47970251
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || ||||||||||||| ||||||||||||||||||| ||||||||    
T  47970301 tttgacttcattttatcttttgttatagaaatagcttatacataagcactt 47970251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 51044546 - 51044596
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||| ||||||||||||||||||| || |||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttatacataaacactt 51044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 17884070 - 17884001
Alignment:
Q  193 ataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||| ||||| |||| | |||||||||||||||| ||||||||||||||| |||  |||||||    
T  17884070 ataacttatacaaaaacaatttaactttattttatcttttgttatagaaatagcttacacatgagcactt 17884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 22684589 - 22684650
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||| |||||| |||||| ||||||||| | |||| ||||||||||||||||||| |||||    
T  22684589 ttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagca 22684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 52645836 - 52645877
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  52645836 tttgaattgattttatcttttgttatagaaatagcttataca 52645877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 53626794 - 53626729
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaa 242  Q
    ||||| ||| |||||||||  ||||| ||||||  |||||||||||||||||||||| ||||||||    
T  53626794 cttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 4191712 - 4191672
Alignment:
Q  222 ttttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcactt 4191672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 25885877 - 25885801
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||| || ||||||  ||| |||||||| |||| | ||||||||||||||||||||||||| |||| |||||    
T  25885877 cttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaataca 25885801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 44138555 - 44138495
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    ||||||||| | |||| | ||||||||||||| ||||||||||| |||||||||| |||||    
T  44138555 tatacgaaagcaatttaactttattttatcttctgctatagaaacagcttatacataagca 44138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 53422359 - 53422307
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    |||||| |||||| ||||||||||||||||||| || | ||||||||||||||    
T  53422359 ttatacaaaaactgtttgaatttattttatcttgtgttgtagaaatagcttat 53422307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 1203210 - 1203245
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||| |||||||||||||||||||||||||    
T  1203210 tttattttatgttttgctatagaaatagcttataca 1203245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 2841764 - 2841689
Alignment:
Q  56 ttatttgagttaatttattgtcataaatacccgtgagattgtctgggagagattatggaaacaacttatgacatgt 131  Q
    ||||||||||| ||  |||| |||||| || ||||||||||| || ||||| ||||| || |||||||||||||||    
T  2841764 ttatttgagtttatccattgacataaaaactcgtgagattgtttgcgagagtttatgaaagcaacttatgacatgt 2841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 247
Target Start/End: Complemental strand, 4691861 - 4691826
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagct 247  Q
    |||||||||||||||||||||| |||||||||||||    
T  4691861 tttgaatttattttatcttttgatatagaaatagct 4691826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 253
Target Start/End: Complemental strand, 6364126 - 6364091
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||| |||||||||||||||||||    
T  6364126 tttattttatcttttgttatagaaatagcttataca 6364091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 7601755 - 7601696
Alignment:
Q  199 tatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    ||||| ||||| |||| | ||||||||||| |||||||||| ||||||||||||| ||||    
T  7601755 tatacaaaaacaatttaactttattttatcctttgctataggaatagcttatacataagc 7601696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 19691424 - 19691349
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| |||||| |||||||||| || ||||||   |||| ||||||||| |||||  |||||||||||||||||||    
T  19691424 ttatgaaatcaacttataatttctatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19691349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 19702009 - 19701934
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| |||||| |||||||||| || ||||||   |||| ||||||||| |||||  |||||||||||||||||||    
T  19702009 ttatgaaatcaacttataatttctatgaaaacaggttgactttattttaacttttattatagaaatagcttataca 19701934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 34368867 - 34368820
Alignment:
Q  205 aaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    ||||| |||||| ||| |||||||||||| ||||||||||||||||||    
T  34368867 aaaacaatttgactttgttttatcttttgttatagaaatagcttatac 34368820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 246
Target Start/End: Original strand, 19670882 - 19670916
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagc 246  Q
    |||||||||||||||||||||| ||||||||||||    
T  19670882 tttgaatttattttatcttttgatatagaaatagc 19670916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 27671919 - 27671969
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||| | | |||||| |||||||||||||||||    
T  27671919 tttgactttattttatcttttgttgtggaaataacttatacacaagcactt 27671969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 28274916 - 28274886
Alignment:
Q  223 tttatcttttgctatagaaatagcttataca 253  Q
    |||||||||||||||||||||||||||||||    
T  28274916 tttatcttttgctatagaaatagcttataca 28274886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 49004065 - 49004103
Alignment:
Q  220 tattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  49004065 tattttatcttttgctatagaaattgcttatacataagc 49004103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 55576014 - 55575957
Alignment:
Q  200 atacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||| ||||| |||||| ||| |||||||||||| | ||||||||||||||||||||||    
T  55576014 atacaaaaacaatttgattttgttttatcttttgtt-tagaaatagcttatacacaagc 55575957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 56480365 - 56480291
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatac 252  Q
    |||| ||| |||||||||| ||||||  |||| |||| | |||||||| ||||||| ||| ||||||||||||||    
T  56480365 ttatgaaaacagcttataacttatacataaacaatttaactttattttgtcttttgttatggaaatagcttatac 56480291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 19040202 - 19040243
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||    
T  19040202 tttgactttattttatctttttctaaagaaatagcttataca 19040243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 21193981 - 21193940
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||    
T  21193981 tttgactttattttatcttttactataaaaatagcttataca 21193940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 21593099 - 21593148
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||| |||||||||||||| | ||||||||||| ||||||| ||||||||    
T  21593099 ttgactttattttatctttagttatagaaatagtttatacataagcactt 21593148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 24444056 - 24443971
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| ||| || ||||||  ||||| ||||| | |||||||||||||||| ||||| | ||||||| ||||||||| ||| ||||    
T  24444056 cttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaactt 24443971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 25487638 - 25487679
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||||| ||||| ||||||||||||||||||| |||||    
T  25487638 tttattttattttttgttatagaaatagcttatacataagca 25487679  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 28749994 - 28750039
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaag 257  Q
    ||||| ||||||| | |||||||||| |||||||||||||||||||    
T  28749994 tttgactttatttcaacttttgctatcgaaatagcttatacacaag 28750039  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 41701514 - 41701563
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagct 247  Q
    ||||| |||||| |||||| |||||||||||||||| |||| ||||||||    
T  41701514 ttatatgaaaacgatttgactttattttatcttttgttatataaatagct 41701563  T

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Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 44007945 - 44007998
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttata 251  Q
    ||||| |||||| |||||  |||||||||||||||| ||||| |||||||||||    
T  44007945 ttatatgaaaacaatttgtctttattttatcttttggtatagtaatagcttata 44007998  T

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Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 49803202 - 49803153
Alignment:
Q  204 gaaaactatttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||||| |||| | || |||||||||||||||||||||||| ||||||||    
T  49803202 gaaaacaatttaacttcattttatcttttgctatagaaataacttataca 49803153  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 50746017 - 50745936
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||||| || ||| || ||||||  |||||  ||||| |||||||||||||||| |||| |||||||||| ||| |||||    
T  50746017 ttataaaaacaacttgtagtttatataaaaacagtttgattttattttatcttttgttataaaaatagcttagacataagca 50745936  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 51630118 - 51630049
Alignment:
Q  188 agcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaag 257  Q
    ||||||||  |||||  ||||| |||| | ||||||||||||||||||||| |||||||||  |||||||    
T  51630118 agcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaatagcttgaacacaag 51630049  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 55437063 - 55437030
Alignment:
Q  220 tattttatcttttgctatagaaatagcttataca 253  Q
    |||||||| |||||||||||||||||||||||||    
T  55437063 tattttatattttgctatagaaatagcttataca 55437030  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 486058 - 486014
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| | |||||||||| |||||| ||||||||    
T  486058 tttattttatcttttgttttagaaatagcatatacataagcactt 486014  T

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Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 2703017 - 2702985
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttat 250  Q
    ||||||||||||||||||||| |||||||||||    
T  2703017 tttattttatcttttgctatataaatagcttat 2702985  T

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Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 9680648 - 9680600
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttatacacaagca 259  Q
    |||||| |||||||||||||||  ||| ||||||||||||||| |||||    
T  9680648 atttgactttattttatcttttattatcgaaatagcttatacataagca 9680600  T

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Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 18967495 - 18967539
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||||||| | |||| ||||||||||||||||||| ||||||||    
T  18967495 tttattttaccgtttgatatagaaatagcttatacataagcactt 18967539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 250
Target Start/End: Original strand, 24371039 - 24371079
Alignment:
Q  211 atttgaatttattttatctttt-gctatagaaatagcttat 250  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  24371039 atttgaatttattttatcttttggttatagaaatagcttat 24371079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 27043883 - 27043963
Alignment:
Q  178 ttataaaatcagcttataatttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||| || ||||||  |||||||||||| |||| | ||||||||||| |||| |||| || || |||||||| ||||    
T  27043883 ttataaaaacatcttatagcttatacgaaaacaatttaactttattttatcctttgttatataagtaccttatacataagc 27043963  T

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Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 30024697 - 30024645
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttat 250  Q
    ||||| |||||| |||| | |||||||||||||||| |||||||||| |||||    
T  30024697 ttatatgaaaacaattttactttattttatcttttgttatagaaataacttat 30024645  T

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Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 34430779 - 34430819
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagc 258  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  34430779 tttattttatattctgctatataaatagcttatacacaagc 34430819  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 37733983 - 37733943
Alignment:
Q  211 atttgaatttattttatcttttgctatagaaatagcttata 251  Q
    |||||| |||||| ||||| |||||||||||||||||||||    
T  37733983 atttgactttattgtatctcttgctatagaaatagcttata 37733943  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 44119250 - 44119290
Alignment:
Q  213 ttgaatttattttatcttttgctatagaaatagcttataca 253  Q
    |||| ||| ||||||||||||||||||||||| ||||||||    
T  44119250 ttgactttgttttatcttttgctatagaaataacttataca 44119290  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 51555960 - 51556004
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| ||||  ||||||||||||| ||||||||    
T  51555960 tttattttatcttttgttataataatagcttatacataagcactt 51556004  T

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Target: scaffold0590 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 262
Target Start/End: Original strand, 1161 - 1211
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  1161 tttgactttattttatcttttgttatagaaatagcttatacataagcactt 1211  T

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Target: scaffold0275 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 2814 - 2764
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  2814 tttgactttattttatcttttgttatagaaatagcttatacataagcactt 2764  T

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Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 63378 - 63422
Alignment:
Q  218 tttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||    
T  63378 tttattttatcttttgttataaaaatagcttataaacaagcactt 63422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 4275 - 4359
Alignment:
Q  177 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatct-tttgctatagaaatagcttatacacaagcac 260  Q
    ||||| ||| ||||||||| |||||| ||||||  ||||| |||||||||||| |||  ||||||||||| ||||| | ||||||    
T  4275 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 4359  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 262
Target Start/End: Complemental strand, 20176 - 20112
Alignment:
Q  198 ttatacgaaaactatttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 262  Q
    ||||| || |||| ||||| |||||||||||||| | |||||||||||  |||||| ||||||||    
T  20176 ttatatgataactgtttgactttattttatctttggttatagaaatagtatatacataagcactt 20112  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 160059 - 160107
Alignment:
Q  212 tttgaatttattttatcttttgctatagaaatagcttatacacaagcac 260  Q
    ||||| |||||||||||||||||||||| ||||| |||| || ||||||    
T  160059 tttgactttattttatcttttgctataggaatagtttatgcataagcac 160107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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