View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1706_low_46 (Length: 247)
Name: NF1706_low_46
Description: NF1706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1706_low_46 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 101 - 247
Target Start/End: Complemental strand, 26306846 - 26306701
Alignment:
| Q |
101 |
cataaatgaactttttgggaataataatattgagtcaaaagctgaccattatacatttattatacacatttgttaaatcgcgagaaatcagataatccct |
200 |
Q |
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| T |
26306846 |
cataaatgaactttttgggaataataatattgagtcaaaagctgaccattatacatttaat-tatacatttgttaaatcgcgagaaatcagataatccct |
26306748 |
T |
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| Q |
201 |
gaaatttgttctactccttaaccaagtcttttatatttatatatata |
247 |
Q |
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| T |
26306747 |
gaaatttgttctactccttaaccaagtcttttatatttatatatata |
26306701 |
T |
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