View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1707-Insertion-21 (Length: 161)

Name: NF1707-Insertion-21
Description: NF1707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1707-Insertion-21
NF1707-Insertion-21
[»] chr4 (18 HSPs)
chr4 (52-157)||(1931526-1931631)
chr4 (49-149)||(3335936-3336036)
chr4 (49-149)||(9284128-9284228)
chr4 (49-149)||(9528649-9528749)
chr4 (49-149)||(25274100-25274200)
chr4 (49-98)||(13634386-13634435)
chr4 (49-146)||(20569477-20569574)
chr4 (49-146)||(38706482-38706579)
chr4 (51-101)||(52097690-52097740)
chr4 (52-146)||(53616425-53616519)
chr4 (49-102)||(2115360-2115413)
chr4 (49-98)||(4142553-4142602)
chr4 (49-98)||(19853301-19853350)
chr4 (49-98)||(21686031-21686080)
chr4 (60-149)||(35261409-35261497)
chr4 (49-149)||(34024210-34024310)
chr4 (55-102)||(46990909-46990956)
chr4 (49-128)||(51318223-51318302)
[»] chr7 (17 HSPs)
chr7 (52-157)||(17499455-17499561)
chr7 (52-157)||(17553653-17553759)
chr7 (49-158)||(22927642-22927751)
chr7 (49-128)||(26492591-26492670)
chr7 (49-113)||(46818176-46818240)
chr7 (52-146)||(34773919-34774013)
chr7 (49-102)||(17611643-17611696)
chr7 (49-98)||(28044545-28044594)
chr7 (49-102)||(42066834-42066887)
chr7 (52-149)||(45198808-45198905)
chr7 (48-84)||(1448603-1448639)
chr7 (48-84)||(12502023-12502059)
chr7 (48-84)||(12527657-12527693)
chr7 (48-84)||(14627669-14627705)
chr7 (52-128)||(32684894-32684970)
chr7 (49-84)||(21266662-21266697)
chr7 (61-128)||(46339280-46339347)
[»] chr2 (21 HSPs)
chr2 (49-149)||(9374335-9374435)
chr2 (52-149)||(4228332-4228429)
chr2 (48-98)||(36942911-36942961)
chr2 (49-146)||(8971400-8971497)
chr2 (49-98)||(18763729-18763778)
chr2 (49-149)||(9986114-9986214)
chr2 (49-149)||(27248923-27249023)
chr2 (49-149)||(36234207-36234307)
chr2 (54-149)||(30420878-30420973)
chr2 (49-90)||(1415826-1415867)
chr2 (49-102)||(4193093-4193146)
chr2 (49-98)||(5427659-5427708)
chr2 (49-102)||(25087291-25087344)
chr2 (49-98)||(33585525-33585574)
chr2 (52-100)||(30923250-30923298)
chr2 (50-98)||(31788717-31788765)
chr2 (48-84)||(32913502-32913538)
chr2 (49-84)||(2808245-2808280)
chr2 (49-84)||(3725454-3725489)
chr2 (49-84)||(22422002-22422037)
chr2 (49-84)||(31580427-31580462)
[»] chr1 (17 HSPs)
chr1 (49-149)||(41081476-41081576)
chr1 (49-149)||(48217646-48217746)
chr1 (52-148)||(18649756-18649852)
chr1 (49-128)||(27914879-27914958)
chr1 (49-128)||(30818136-30818215)
chr1 (49-149)||(30879284-30879384)
chr1 (49-83)||(14545750-14545784)
chr1 (49-146)||(9686977-9687074)
chr1 (49-146)||(25406056-25406153)
chr1 (49-86)||(30712081-30712118)
chr1 (49-90)||(44543533-44543573)
chr1 (49-146)||(51868417-51868514)
chr1 (49-149)||(11454146-11454246)
chr1 (48-84)||(34519402-34519438)
chr1 (54-146)||(45805606-45805698)
chr1 (49-84)||(20266576-20266611)
chr1 (49-96)||(49504384-49504431)
[»] chr3 (17 HSPs)
chr3 (52-138)||(29503674-29503760)
chr3 (49-128)||(4178788-4178867)
chr3 (49-98)||(21533598-21533647)
chr3 (49-146)||(25631298-25631395)
chr3 (52-149)||(32607671-32607768)
chr3 (49-149)||(25162638-25162738)
chr3 (49-100)||(21488344-21488395)
chr3 (52-102)||(24396291-24396341)
chr3 (52-102)||(25850047-25850097)
chr3 (49-146)||(2342653-2342750)
chr3 (49-98)||(20464754-20464803)
chr3 (49-146)||(36906327-36906424)
chr3 (49-98)||(43017138-43017187)
chr3 (53-98)||(48650527-48650572)
chr3 (49-98)||(52922906-52922955)
chr3 (49-90)||(53807648-53807689)
chr3 (49-84)||(38854811-38854846)
[»] chr5 (12 HSPs)
chr5 (49-149)||(34881924-34882024)
chr5 (49-128)||(10649870-10649949)
chr5 (49-128)||(21060055-21060134)
chr5 (49-128)||(27752153-27752232)
chr5 (52-90)||(35851055-35851093)
chr5 (49-98)||(6011927-6011976)
chr5 (49-146)||(7241994-7242091)
chr5 (49-146)||(7247169-7247266)
chr5 (49-98)||(9113514-9113563)
chr5 (49-149)||(7612831-7612930)
chr5 (49-149)||(43148934-43149034)
chr5 (48-83)||(13422197-13422232)
[»] chr8 (9 HSPs)
chr8 (49-98)||(7883028-7883077)
chr8 (49-146)||(14906695-14906792)
chr8 (49-149)||(4809176-4809276)
chr8 (49-90)||(1236485-1236526)
chr8 (48-149)||(27746886-27746987)
chr8 (49-146)||(29777434-29777531)
chr8 (52-113)||(44578278-44578339)
chr8 (49-149)||(33896298-33896398)
chr8 (49-149)||(44099708-44099808)
[»] chr6 (13 HSPs)
chr6 (49-98)||(606456-606505)
chr6 (49-146)||(8497176-8497273)
chr6 (49-150)||(16419362-16419463)
chr6 (49-149)||(25064441-25064541)
chr6 (49-102)||(23947089-23947142)
chr6 (49-98)||(32327009-32327058)
chr6 (48-84)||(7028125-7028161)
chr6 (49-157)||(8027890-8027998)
chr6 (49-149)||(12653149-12653249)
chr6 (49-149)||(17237058-17237158)
chr6 (54-146)||(33740355-33740447)
chr6 (49-128)||(4984339-4984418)
chr6 (49-88)||(29319666-29319705)
[»] scaffold0014 (1 HSPs)
scaffold0014 (52-128)||(201148-201224)
[»] scaffold0445 (1 HSPs)
scaffold0445 (49-91)||(1630-1672)
[»] scaffold0022 (1 HSPs)
scaffold0022 (52-102)||(83212-83262)
[»] scaffold0311 (1 HSPs)
scaffold0311 (56-128)||(8917-8989)
[»] scaffold0443 (1 HSPs)
scaffold0443 (60-159)||(4400-4499)


Alignment Details
Target: chr4 (Bit Score: 86; Significance: 2e-41; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 1931526 - 1931631
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaacaac 151  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  1931526 acaaaaataaaatgatattcattcgttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagaagcgaacaaattcacagcaac 1931625  T
Q  152 aaagtt 157  Q
    ||||||    
T  1931626 aaagtt 1931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 3335936 - 3336036
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||||||||  |||||||||  ||||||||||||||| |||||||||| ||| | |||| | ||||| ||||||  |||||||||| ||| |||    
T  3335936 ttgacaaaaacaaaacaatattcattcattcaaatcaatagagtacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaaaac 3336035  T
Q  149 a 149  Q
    |    
T  3336036 a 3336036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 9284228 - 9284128
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||||||||||  | | |||||| |||||||    
T  9284228 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacaaactcacaac 9284129  T
Q  149 a 149  Q
    |    
T  9284128 a 9284128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 9528649 - 9528749
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  9528649 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 9528748  T
Q  149 a 149  Q
    |    
T  9528749 a 9528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 25274200 - 25274100
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  25274200 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 25274101  T
Q  149 a 149  Q
    |    
T  25274100 a 25274100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 13634435 - 13634386
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  13634435 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatca 13634386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 20569574 - 20569477
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  20569574 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 38706482 - 38706579
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||||||||| |||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||||||||||  ||| |||||| |||||    
T  38706482 ttgacaaaaacaaaatcatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcaca 38706579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 52097690 - 52097740
Alignment:
Q  51 gacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattc 101  Q
    ||||||||||||| ||||||||||  |||||||||| |||| |||||||||    
T  52097690 gacaaaaacaaaacgatattcattcattcaaatcaacagagtacatcattc 52097740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 53616425 - 53616519
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 53616519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 2115360 - 2115413
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||||||||    
T  2115360 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattca 2115413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 4142553 - 4142602
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  4142553 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 4142602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 19853301 - 19853350
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  19853301 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 19853350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 21686031 - 21686080
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  21686031 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 21686080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 35261497 - 35261409
Alignment:
Q  60 aaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaaca 149  Q
    |||||||||||||||  |||||||| || ||| |||||||||| ||||  |||| | ||||| ||||||  |||||||||| ||||||||    
T  35261497 aaaatgatattcattcattcaaatcgat-gagtacatcattcaacacttctaaaaacgtaaaggatgaatctgcaaacaaactcacaaca 35261409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 34024210 - 34024310
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||| ||||||||||||||||  |||||||| | |||  ||| |||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  34024210 ttgacaaaagcaaaatgatattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 34024309  T
Q  149 a 149  Q
    |    
T  34024310 a 34024310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 46990909 - 46990956
Alignment:
Q  55 aaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    |||| |||||||||||||||  |||||||| |||||| ||||||||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtacatcattca 46990956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 51318302 - 51318223
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||| |||||||||||||||  || ||||| | |||  |||||||||| ||||| |||| | ||||| ||||||    
T  51318302 ttgacaaaaataaaatgatattcattcatttaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaa 51318223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 7e-35; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 17499455 - 17499561
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaa-gatgaagatgcaaacaaattcacaacaa 150  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||| ||||||||||||||||    
T  17499455 acaaaaataaaatgatattcattcgttcaaatcaatagagaacatcattcaccactcttaaagatgtaaaactgtgaagatgcgaacaaattcacaacaa 17499554  T
Q  151 caaagtt 157  Q
    |||||||    
T  17499555 caaagtt 17499561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 7e-35
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 17553759 - 17553653
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaa-gatgaagatgcaaacaaattcacaacaa 150  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||| ||||||||||||||||    
T  17553759 acaaaaataaaatgatattcattcgttcaaatcaatagagaacatcattcaccactcttaaagatgtaaaactgtgaagatgcgaacaaattcacaacaa 17553660  T
Q  151 caaagtt 157  Q
    |||||||    
T  17553659 caaagtt 17553653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 22927642 - 22927751
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||| ||||| |||||||||||||||| |||||||| | |||  |||||||||| ||| | |||| ||||||| ||||||  ||| |||||| ||||| |    
T  22927642 ttgaaaaaaataaaatgatattcattaattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacaaactcacagc 22927741  T
Q  149 aacaaagttg 158  Q
    ||| ||||||    
T  22927742 aaccaagttg 22927751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 26492670 - 26492591
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||||||||||    
T  26492670 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaa 26492591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 46818176 - 46818240
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaa 113  Q
    ||||||||||||||| ||||||||| | |||||||| |||||  |||||||||| ||| ||||||    
T  46818176 ttgacaaaaacaaaacgatattcataaattcaaatcgatagattacatcattcaacaccgttaaa 46818240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 146
Target Start/End: Complemental strand, 34774013 - 34773919
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||| ||  |||||||||| |||||    
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcaaacaaactcaca 34773919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 17611696 - 17611643
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||| ||||||||||  |||||||  |||||| ||||||||||    
T  17611696 ttgacaaaaacaaaacgatattcattcattcaaattgatagagtacatcattca 17611643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 28044545 - 28044594
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  28044545 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 28044594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 42066834 - 42066887
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||||||||    
T  42066834 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattca 42066887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 45198808 - 45198905
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaaca 149  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||| | ||||||||    
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcacaaca 45198905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 1448603 - 1448639
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  1448603 gttgacaaaaacaaaatgatattcattcattcaaatc 1448639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 12502023 - 12502059
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  12502023 gttgacaaaaacaaaatgatattcattcattcaaatc 12502059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 12527657 - 12527693
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  12527657 gttgacaaaaacaaaatgatattcattcattcaaatc 12527693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 14627669 - 14627705
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  14627669 gttgacaaaaacaaaatgatattcattcattcaaatc 14627705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 32684970 - 32684894
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||    
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatcattcaacaccgctaaaaacgtaaaggatgaa 32684894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 21266697 - 21266662
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  21266697 ttgacaaaaacaaaatgatattcattcattcaaatc 21266662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 46339347 - 46339280
Alignment:
Q  61 aaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||| ||  |||||||||| |||  |||||||||| |||||||||| | ||||| ||||||    
T  46339347 aaatgatattctttcattcaaatcaagagattacatcattcaacactgttaaaaacgtaaaggatgaa 46339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 9374335 - 9374435
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||| ||||||||||  |||||||| | |||| |||||||||| ||| | |||| | ||||| |||||| |||| || |||||||||||    
T  9374335 ttgacaaaaacaaaacgatattcattcattcaaatcgacagagtacatcattcaacacggctaaaaacgtaaatgatgaatatgcgaaaaaattcacaac 9374434  T
Q  149 a 149  Q
    |    
T  9374435 a 9374435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.0000000000009
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 4228429 - 4228332
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaaca 149  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| ||||||| ||||||  ||| |||||| ||||||||    
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaaca 4228332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 36942911 - 36942961
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    |||||||||||||||| ||||||||||  ||||||||||||||| ||||||    
T  36942911 gttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatca 36942961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 8971400 - 8971497
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||| ||||  |||||||| | |||  |||||||||| ||| | |||  ||||||| |||||| |||| |||||| |||||    
T  8971400 ttgacaaaaacaaaatgatatccattcattcaaatcgagagattacatcattcaacaccgctaagaatgtaaaggatgaatatgcgaacaaactcaca 8971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 18763778 - 18763729
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| ||||||    
T  18763778 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatca 18763729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 9986114 - 9986214
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  | |||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  9986114 ttgacaaaaacaaaatgatattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 9986213  T
Q  149 a 149  Q
    |    
T  9986214 a 9986214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 27248923 - 27249023
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  | |||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  27248923 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 27249022  T
Q  149 a 149  Q
    |    
T  27249023 a 27249023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 36234307 - 36234207
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||  |||||| |||||||    
T  36234307 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaac 36234208  T
Q  149 a 149  Q
    |    
T  36234207 a 36234207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 149
Target Start/End: Complemental strand, 30420973 - 30420878
Alignment:
Q  54 aaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaaca 149  Q
    ||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| ||||||| ||||||  ||| |||||| ||||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaaca 30420878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 1415867 - 1415826
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaataga 90  Q
    ||||||||||||||||||||||||||  |||||||| |||||    
T  1415867 ttgacaaaaacaaaatgatattcattcattcaaatcgataga 1415826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 4193146 - 4193093
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||||||||    
T  4193146 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattca 4193093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 5427659 - 5427708
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  5427659 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 5427708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 25087344 - 25087291
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||||||||    
T  25087344 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattca 25087291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 33585525 - 33585574
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||| ||||||    
T  33585525 ttgacaaaaacaaaacgatattctttcattcaaatcaatagagtacatca 33585574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 30923250 - 30923298
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcatt 100  Q
    |||||||||||||||||||||||  |||||||  |||||| ||||||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatcatt 30923298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 31788765 - 31788717
Alignment:
Q  50 tgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    |||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  31788765 tgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 31788717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 32913538 - 32913502
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  32913538 gttgacaaaaacaaaatgatattcattcattcaaatc 32913502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 2808245 - 2808280
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  2808245 ttgacaaaaacaaaatgatattcattcattcaaatc 2808280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 3725489 - 3725454
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  3725489 ttgacaaaaacaaaatgatattcatttattcaaatc 3725454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 22422037 - 22422002
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  22422037 ttgacaaaaacaaaatgatattcattcattcaaatc 22422002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 31580427 - 31580462
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  31580427 ttgacaaaaacaaaatgatattcattcattcaaatc 31580462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 41081476 - 41081576
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| |||||| |||||||||| || || |||| | |||||| |||||  ||  |||||| |||||||    
T  41081476 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcattcaacagtgctaaaaacgtaaaacatgaatctgtgaacaaactcacaac 41081575  T
Q  149 a 149  Q
    |    
T  41081576 a 41081576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 48217746 - 48217646
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||| | ||||| |||| ||||||| ||||||  ||| |||||| |||||||    
T  48217746 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttaacactgctaaaaatgtaaaggatgaatttgcgaacaaactcacaac 48217647  T
Q  149 a 149  Q
    |    
T  48217646 a 48217646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 18649756 - 18649852
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||| ||||||| ||| ||||  ||| || | |||||||| ||||| |||| | ||||||||||||  | ||||||||||||||||    
T  18649756 acaaaaacaaaatgacattcattcgtttaaattgatatagtatatcattcaacactgctaaaaacgtaaaagatgaaccttcaaacaaattcacaac 18649852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 27914879 - 27914958
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||||||||||||||||||  |||||||||| | |  |||||||||| ||| | |||| ||||||| ||||||    
T  27914879 ttgacaaaaacaaaatgatattcattcattcaaatcaagatattacatcattcaacaccgctaaaaatgtaaaggatgaa 27914958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 30818136 - 30818215
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||||||| ||||||||||| |||||||||| | |  |||||||||| ||| | |||| ||||||| ||||||    
T  30818136 ttgacaaaaacaaaaagatattcattaattcaaatcaagaaattacatcattcaacaccgctaaaaatgtaaaggatgaa 30818215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 30879384 - 30879284
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | |||||  |||||  ||| |||||| |||||||    
T  30879384 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcacaac 30879285  T
Q  149 a 149  Q
    |    
T  30879284 a 30879284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 83
Target Start/End: Complemental strand, 14545784 - 14545750
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaat 83  Q
    |||||||||||||||||||||||||| ||||||||    
T  14545784 ttgacaaaaacaaaatgatattcattcgttcaaat 14545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 9686977 - 9687074
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||||||||  |||||||| | | |  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  9686977 ttgacaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 9687074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 25406056 - 25406153
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | | |  |||||||||| ||| | |||| | ||||||||||||  ||| |||||| |||||    
T  25406056 ttgacaaaaataaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcaca 25406153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 30712081 - 30712118
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaa 86  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  30712081 ttgacaaaaacaaaatgatattcattcattcaaatcaa 30712118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 90
Target Start/End: Complemental strand, 44543573 - 44543533
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaataga 90  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  44543573 ttgacaaaaacaaaatgatattcatca-ttcaaatcaataga 44543533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 51868417 - 51868514
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  51868417 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcaca 51868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 11454246 - 11454146
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| ||||||||||| |||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  11454246 ttgacaaaaataaaatgatatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 11454147  T
Q  149 a 149  Q
    |    
T  11454146 a 11454146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 34519438 - 34519402
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  34519438 gttgacaaaaacaaaatgatattcattcattcaaatc 34519402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 45805606 - 45805698
Alignment:
Q  54 aaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| |||||| | ||||| ||||||  ||| |||||| |||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaaggatgaatctgcgaacaaactcaca 45805698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 20266611 - 20266576
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  20266611 ttgacaaaaacaaaatgatattcattcattcaaatc 20266576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 49504384 - 49504431
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacat 96  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||    
T  49504384 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacat 49504431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000002; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 29503760 - 29503674
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaaca 138  Q
    |||||||||||||||||||||||  ||||||||||||||  |||| ||||| ||| | |||| ||||||| |||||| |||| ||||    
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacattattcaacaccgctaaaaatgtaaaggatgaatatgcgaaca 29503674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 4178867 - 4178788
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||||| |||| | ||||| ||||||    
T  4178867 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaa 4178788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 21533598 - 21533647
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  21533598 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatca 21533647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 25631298 - 25631395
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| ||||||| ||||||  ||| |||||| |||||    
T  25631298 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcaca 25631395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 32607768 - 32607671
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaaca 149  Q
    |||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| ||||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaaca 32607671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 25162738 - 25162638
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||   || |||||| |||||||    
T  25162738 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaacaaactcacaac 25162639  T
Q  149 a 149  Q
    |    
T  25162638 a 25162638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 21488395 - 21488344
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcatt 100  Q
    |||||||||| |||||||||||||||  ||||||||||||||| | ||||||    
T  21488395 ttgacaaaaataaaatgatattcatttattcaaatcaatagagtatatcatt 21488344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 24396291 - 24396341
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    |||||||||||| ||||||||||| |||||||  |||||| ||||||||||    
T  24396291 acaaaaacaaaacgatattcattaattcaaattgatagagtacatcattca 24396341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 25850097 - 25850047
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    |||||||||||| ||||||||||  |||||||||||| || ||||||||||    
T  25850097 acaaaaacaaaacgatattcattcattcaaatcaataaagtacatcattca 25850047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 2342750 - 2342653
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||| || | ||| | |||||| ||||| ||||||  ||| |||||| |||||    
T  2342750 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcgtttaacaccgctaaagacgtaaaggatgaatctgcgaacaaactcaca 2342653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 20464754 - 20464803
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||||||||||||||  |||||||  |||||| ||||||    
T  20464754 ttgacaaaaacaaaatgatattcattcattcaaattgatagagtacatca 20464803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 36906424 - 36906327
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  36906424 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 36906327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 43017187 - 43017138
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  43017187 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 43017138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 48650527 - 48650572
Alignment:
Q  53 caaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||||||||||  |||||||| |||||| ||||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtacatca 48650572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 52922906 - 52922955
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  52922906 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 52922955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 53807648 - 53807689
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaataga 90  Q
    ||||||||||||||||||||||||||  || |||||||||||    
T  53807648 ttgacaaaaacaaaatgatattcattcattaaaatcaataga 53807689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 38854811 - 38854846
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    ||||||||||||||||||||||||||  ||||||||    
T  38854811 ttgacaaaaacaaaatgatattcattcattcaaatc 38854846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 34882024 - 34881924
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| |  |||| ||||||  |||||||||| |||||||    
T  34882024 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcaaacaaactcacaac 34881925  T
Q  149 a 149  Q
    |    
T  34881924 a 34881924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 10649949 - 10649870
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| |||||| | ||||| ||||||    
T  10649949 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaatgatgaa 10649870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 21060055 - 21060134
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||    
T  21060055 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaa 21060134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 27752232 - 27752153
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    ||||||||||| ||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||||||||||    
T  27752232 ttgacaaaaacgaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaa 27752153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 35851093 - 35851055
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaataga 90  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  35851093 acaaaaacaaaatgatattcattcattcaaatcaataga 35851055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 6011927 - 6011976
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  6011927 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 6011976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 7242091 - 7241994
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  7242091 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 7241994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 7247266 - 7247169
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  7247266 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 7247169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 9113514 - 9113563
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  9113514 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 9113563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 7612831 - 7612930
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||| ||||||||||  ||| | || ||||||  ||||||||| ||| | |||| | ||||||||||||  ||| |||||| |||||||    
T  7612831 ttgacaaaaacaaaacgatattcatttattc-attcgatagagttcatcattcaacaccgctaaaaacgtaaaagatgaatttgcgaacaaactcacaac 7612929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 43149034 - 43148934
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| | |||||||||||||  |||||||| | |||  | |||||||| ||| | |||| ||||||| ||||||  ||| |||||| |||||||    
T  43149034 ttgacaaaaatacaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaac 43148935  T
Q  149 a 149  Q
    |    
T  43148934 a 43148934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 83
Target Start/End: Complemental strand, 13422232 - 13422197
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaat 83  Q
    |||||||||||||||||||||||||||  |||||||    
T  13422232 gttgacaaaaacaaaatgatattcattcattcaaat 13422197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000002; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 7883028 - 7883077
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  ||||||||||||||| ||||||    
T  7883028 ttgacaaaaacaaaacgatattcattcattcaaatcaatagagtacatca 7883077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 14906695 - 14906792
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  14906695 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 14906792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 4809276 - 4809176
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  4809276 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 4809177  T
Q  149 a 149  Q
    |    
T  4809176 a 4809176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 1236485 - 1236526
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaataga 90  Q
    ||||||||||||||||||||||||||  |||||||| |||||    
T  1236485 ttgacaaaaacaaaatgatattcattcattcaaatcgataga 1236526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 27746886 - 27746987
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaa 147  Q
    |||||||||||||||| ||||||||||  |||||||||||  |  ||||||||||  || | |||| | ||||| ||||||  |||||| ||||| ||||    
T  27746886 gttgacaaaaacaaaacgatattcattcattcaaatcaatgaattacatcattcaataccgctaaaaacgtaaatgatgaatctgcaaataaatttacaa 27746985  T
Q  148 ca 149  Q
    ||    
T  27746986 ca 27746987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 29777531 - 29777434
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  29777531 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 29777434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 44578339 - 44578278
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaa 113  Q
    ||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||||||||||    
T  44578339 acaaaaataaaatgatattcatttattcaaatcgagagattacatcattcaacactgttaaa 44578278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 33896398 - 33896298
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| ||||||||||| |||  |||||||| | |||  |||||||||| ||| | |||| ||||||| ||||||  ||| || ||| |||||||    
T  33896398 ttgacaaaaataaaatgatatttattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaaaaaactcacaac 33896299  T
Q  149 a 149  Q
    |    
T  33896298 a 33896298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 44099708 - 44099808
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||||||||||||||| |||  |||||||  | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  44099708 ttgacaaaaacaaaatgatatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgctaacaaactcacaac 44099807  T
Q  149 a 149  Q
    |    
T  44099808 a 44099808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 606505 - 606456
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||||||||||||||  |||||||| |||||| ||||||    
T  606505 ttgacaaaaacaaaatgatattcattcattcaaatcgatagagtacatca 606456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 8497273 - 8497176
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||    
T  8497273 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 8497176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 16419463 - 16419362
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| |||||||||||||||  |||||||  | |||  |||||||||| ||| | |||| | ||||||||||||  ||| |||||| |||||||    
T  16419463 ttgacaaaaataaaatgatattcatttattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacaac 16419364  T
Q  149 aa 150  Q
    ||    
T  16419363 aa 16419362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 25064541 - 25064441
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||||| |||||||    
T  25064541 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaac 25064442  T
Q  149 a 149  Q
    |    
T  25064441 a 25064441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 23947089 - 23947142
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    ||||||||||||||||||||||||||  |||||||| | |||  ||||||||||    
T  23947089 ttgacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattca 23947142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 98
Target Start/End: Original strand, 32327009 - 32327058
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatca 98  Q
    ||||||||||||||| ||||||||||  |||||||| |||||| ||||||    
T  32327009 ttgacaaaaacaaaacgatattcattcattcaaatcgatagagtacatca 32327058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 7028161 - 7028125
Alignment:
Q  48 gttgacaaaaacaaaatgatattcattagttcaaatc 84  Q
    |||||||||||||||||||||||||||  ||||||||    
T  7028161 gttgacaaaaacaaaatgatattcattcattcaaatc 7028125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 8027890 - 8027998
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    |||||| |||||||||||||||||||  |||||||| | |||  |||| ||||| ||| | |||| | ||||| ||||||  ||| |||||| ||||| |    
T  8027890 ttgacagaaacaaaatgatattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcacatc 8027989  T
Q  149 aacaaagtt 157  Q
    | |||||||    
T  8027990 atcaaagtt 8027998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 12653249 - 12653149
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||||||||||||||||||||||  || ||||| | |||  |||||||||| ||| | |||| | ||| | ||||||  ||| |||||| |||||||    
T  12653249 ttgacaaaaacaaaatgatattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtacaggatgaatctgcgaacaaactcacaac 12653150  T
Q  149 a 149  Q
    |    
T  12653149 a 12653149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 17237058 - 17237158
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaac 148  Q
    ||||||| ||||||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||  ||| |||| | |||||||    
T  17237058 ttgacaacaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacacactcacaac 17237157  T
Q  149 a 149  Q
    |    
T  17237158 a 17237158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 33740355 - 33740447
Alignment:
Q  54 aaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcaca 146  Q
    ||||||||||| |||||||||  || ||||||| |||  |||||||||| ||||| |||| | ||||| ||||||  ||| |||||| |||||    
T  33740355 aaaaacaaaataatattcattcatttaaatcaagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 33740447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 4984339 - 4984418
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||| |||||||||||||||  |||||||| | |||  |||||||||| ||| | |||| | ||||| ||||||    
T  4984339 ttgacaaaaataaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaa 4984418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 29319666 - 29319705
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaata 88  Q
    ||||||||||||||||||||||||||  ||||||| ||||    
T  29319666 ttgacaaaaacaaaatgatattcattcattcaaattaata 29319705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 201148 - 201224
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||||||||||||||||  |||||||| |||||  |||||||||| |||   |||| ||||||| ||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatcattcaacaccactaaaaatgtaaaggatgaa 201224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 1672 - 1630
Alignment:
Q  49 ttgacaaaaacaaaatgatattcattagttcaaatcaatagag 91  Q
    ||||||||||||||| ||||||||||  |||||||||||||||    
T  1672 ttgacaaaaacaaaacgatattcattcattcaaatcaatagag 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 83212 - 83262
Alignment:
Q  52 acaaaaacaaaatgatattcattagttcaaatcaatagagaacatcattca 102  Q
    |||||||||||||||||||||||  |||||||||| |||  ||||||||||    
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatcattca 83262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 8989 - 8917
Alignment:
Q  56 aaacaaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaa 128  Q
    |||||||||||||||||||  |||||||| | |||  |||||||||| ||| ||| || ||||||| ||||||    
T  8989 aaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgtttaaaatgtaaaggatgaa 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 4499 - 4400
Alignment:
Q  60 aaaatgatattcattagttcaaatcaatagagaacatcattcaccactgttaaagatgtaaaagatgaagatgcaaacaaattcacaacaacaaagttgg 159  Q
    |||||||||||||||  || ||||||| |||  |||||||||| ||| | |||| | ||||  ||||||  |||||||||| |||||||| | |||||||    
T  4499 aaaatgatattcattcatttaaatcaagagattacatcattcaacaccgctaaaaacgtaagggatgaatctgcaaacaaactcacaacatccaagttgg 4400  T

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