View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17071_high_1 (Length: 466)

Name: NF17071_high_1
Description: NF17071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17071_high_1
NF17071_high_1
[»] chr5 (36 HSPs)
chr5 (1-438)||(38816503-38816932)
chr5 (228-303)||(19820428-19820503)
chr5 (148-277)||(22423764-22423895)
chr5 (236-303)||(22013364-22013431)
chr5 (229-303)||(42469171-42469245)
chr5 (229-278)||(15410483-15410532)
chr5 (229-281)||(6326332-6326384)
chr5 (180-305)||(37328829-37328955)
chr5 (180-264)||(3966492-3966577)
chr5 (230-288)||(15382442-15382500)
chr5 (231-264)||(6035472-6035505)
chr5 (146-195)||(8420075-8420124)
chr5 (228-281)||(21191090-21191143)
chr5 (236-303)||(2436878-2436939)
chr5 (148-200)||(9929668-9929720)
chr5 (228-264)||(17123037-17123073)
chr5 (237-281)||(21522722-21522766)
chr5 (237-281)||(21533288-21533332)
chr5 (228-264)||(27144452-27144488)
chr5 (228-303)||(6247572-6247647)
chr5 (180-264)||(11685928-11686012)
chr5 (228-271)||(14674251-14674294)
chr5 (228-271)||(19579683-19579726)
chr5 (229-288)||(21137654-21137713)
chr5 (228-271)||(34879332-34879375)
chr5 (229-271)||(5873548-5873590)
chr5 (146-176)||(24906250-24906280)
chr5 (229-259)||(27932229-27932259)
chr5 (228-262)||(28588708-28588742)
chr5 (235-281)||(36642803-36642849)
chr5 (228-277)||(19552577-19552626)
chr5 (230-303)||(30135264-30135336)
chr5 (226-255)||(32766975-32767004)
chr5 (228-288)||(13287433-13287493)
chr5 (228-264)||(31084312-31084348)
chr5 (180-264)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (229-303)||(27944991-27945065)
chr7 (229-303)||(24105629-24105702)
chr7 (178-260)||(29787354-29787435)
chr7 (228-281)||(11722132-11722185)
chr7 (180-290)||(24339605-24339716)
chr7 (197-278)||(19206025-19206107)
chr7 (180-264)||(32308109-32308194)
chr7 (148-258)||(11700798-11700909)
chr7 (228-288)||(1433419-1433479)
chr7 (148-308)||(7328639-7328805)
chr7 (232-303)||(2034392-2034462)
chr7 (228-279)||(2425767-2425818)
chr7 (228-303)||(43027503-43027578)
chr7 (229-288)||(43249958-43250017)
chr7 (228-270)||(8046061-8046103)
chr7 (197-264)||(22484014-22484082)
chr7 (228-270)||(23191879-23191921)
chr7 (228-278)||(26733279-26733329)
chr7 (185-259)||(30731031-30731104)
chr7 (188-261)||(11072290-11072362)
chr7 (230-279)||(49107795-49107844)
chr7 (228-264)||(20549780-20549816)
chr7 (228-267)||(2948669-2948708)
chr7 (180-264)||(6630897-6630982)
chr7 (228-271)||(21828439-21828482)
chr7 (229-260)||(28155563-28155594)
chr7 (228-302)||(598160-598233)
chr7 (229-279)||(5235960-5236010)
chr7 (180-246)||(9933282-9933347)
chr7 (228-270)||(20545270-20545312)
chr7 (230-288)||(26329418-26329476)
chr7 (230-279)||(4017830-4017879)
chr7 (147-176)||(17852091-17852120)
chr7 (231-264)||(25791642-25791675)
chr7 (228-280)||(11061110-11061162)
chr7 (148-176)||(15680900-15680928)
chr7 (228-288)||(17851396-17851456)
chr7 (228-264)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (180-281)||(10294079-10294181)
chr6 (228-288)||(9027143-9027203)
chr6 (228-303)||(853893-853968)
chr6 (180-288)||(16766662-16766771)
chr6 (228-288)||(5000660-5000720)
chr6 (148-288)||(5732474-5732604)
chr6 (235-303)||(8365560-8365628)
chr6 (229-301)||(12696277-12696348)
chr6 (148-278)||(8805524-8805656)
chr6 (180-288)||(9107355-9107464)
chr6 (228-279)||(9629357-9629408)
chr6 (228-303)||(30866178-30866253)
chr6 (229-303)||(6389693-6389767)
chr6 (228-278)||(9658854-9658904)
chr6 (228-266)||(19040339-19040377)
chr6 (235-303)||(3398569-3398637)
chr6 (228-288)||(7938081-7938141)
chr6 (229-277)||(13851712-13851760)
chr6 (229-288)||(7977865-7977924)
chr6 (228-271)||(20371144-20371187)
chr6 (185-288)||(34073337-34073441)
chr6 (228-281)||(426548-426601)
chr6 (228-269)||(7265627-7265668)
chr6 (228-280)||(8777007-8777059)
chr6 (228-288)||(34595099-34595159)
chr6 (148-195)||(426478-426525)
chr6 (228-271)||(17841623-17841666)
chr6 (197-280)||(31579229-31579311)
chr6 (229-303)||(25038106-25038180)
chr6 (228-302)||(31959111-31959184)
chr6 (146-176)||(34073276-34073306)
chr6 (148-189)||(2117134-2117175)
chr6 (228-261)||(10842524-10842557)
chr6 (184-278)||(26562664-26562759)
chr6 (228-264)||(677826-677862)
chr6 (230-303)||(4877890-4877965)
chr6 (228-304)||(7930254-7930330)
chr6 (228-264)||(7996412-7996448)
chr6 (228-264)||(8022353-8022389)
chr6 (228-264)||(10339160-10339196)
chr6 (228-280)||(16833281-16833333)
chr6 (228-264)||(17341698-17341734)
chr6 (229-261)||(21395342-21395374)
chr6 (228-264)||(21424836-21424872)
chr6 (180-264)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (180-281)||(22651948-22652050)
chr8 (180-286)||(29510289-29510396)
chr8 (235-303)||(25192388-25192456)
chr8 (228-294)||(926822-926888)
chr8 (228-281)||(27213519-27213572)
chr8 (235-303)||(126390-126457)
chr8 (228-303)||(13436998-13437073)
chr8 (228-271)||(31109552-31109595)
chr8 (228-290)||(24362236-24362298)
chr8 (228-261)||(39954313-39954346)
chr8 (228-268)||(31236611-31236651)
chr8 (195-271)||(37283812-37283887)
chr8 (228-303)||(4298920-4298994)
chr8 (228-303)||(11944615-11944690)
chr8 (228-290)||(4673459-4673521)
chr8 (228-262)||(27101506-27101540)
chr8 (228-270)||(34897068-34897110)
chr8 (185-303)||(11927076-11927195)
chr8 (228-261)||(13844630-13844663)
chr8 (228-288)||(2572090-2572150)
chr8 (228-280)||(20873042-20873094)
chr8 (180-276)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (192-303)||(21782817-21782927)
chr2 (239-303)||(33519736-33519800)
chr2 (228-303)||(20539708-20539783)
chr2 (197-288)||(4332891-4332981)
chr2 (228-278)||(21616737-21616787)
chr2 (230-303)||(19536434-19536507)
chr2 (231-304)||(23717976-23718048)
chr2 (231-304)||(24105648-24105720)
chr2 (197-255)||(1327976-1328033)
chr2 (180-278)||(36409614-36409711)
chr2 (203-288)||(18276486-18276570)
chr2 (237-302)||(21624217-21624282)
chr2 (148-261)||(19573970-19574078)
chr2 (180-253)||(44860320-44860394)
chr2 (178-266)||(18420417-18420506)
chr2 (148-195)||(19536361-19536408)
chr2 (228-263)||(37411278-37411313)
chr2 (228-302)||(38117193-38117261)
chr2 (230-304)||(14996260-14996333)
chr2 (149-195)||(18255945-18255991)
chr2 (229-304)||(21374734-21374810)
chr2 (198-288)||(28412315-28412404)
chr2 (228-286)||(31018557-31018615)
chr2 (149-195)||(34691770-34691816)
chr2 (149-195)||(34714182-34714228)
chr2 (183-304)||(2331743-2331863)
chr2 (229-290)||(4142875-4142936)
chr2 (229-270)||(21091706-21091747)
chr2 (228-264)||(896200-896236)
chr2 (229-277)||(10535794-10535842)
chr2 (228-280)||(30404884-30404936)
chr2 (228-260)||(31284041-31284073)
chr2 (148-184)||(42511322-42511358)
chr2 (229-261)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (228-304)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (148-303)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (228-304)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (228-280)||(6427323-6427375)
chr1 (228-288)||(40917716-40917776)
chr1 (228-287)||(398799-398858)
chr1 (228-280)||(2896155-2896207)
chr1 (149-295)||(10572535-10572690)
chr1 (229-304)||(5376535-5376609)
chr1 (228-303)||(5927374-5927449)
chr1 (148-201)||(48547938-48547991)
chr1 (228-272)||(12443494-12443538)
chr1 (228-264)||(17831565-17831601)
chr1 (228-264)||(36878450-36878486)
chr1 (189-281)||(1486703-1486796)
chr1 (188-288)||(38503285-38503386)
chr1 (146-249)||(44482234-44482343)
chr1 (235-290)||(48040503-48040558)
chr1 (203-281)||(1262856-1262933)
chr1 (228-278)||(9709795-9709845)
chr1 (228-278)||(34298411-34298461)
chr1 (229-303)||(39130802-39130876)
chr1 (228-264)||(19562655-19562691)
chr1 (229-264)||(609493-609528)
chr1 (228-271)||(6415035-6415078)
chr1 (228-303)||(31014993-31015068)
chr1 (228-271)||(46348417-46348460)
chr1 (229-280)||(48450622-48450673)
chr1 (230-264)||(3490426-3490460)
chr1 (228-262)||(10475011-10475045)
chr1 (228-294)||(15641064-15641130)
chr1 (226-264)||(40285686-40285724)
chr1 (228-281)||(20157384-20157437)
chr1 (228-261)||(21530681-21530714)
chr1 (180-258)||(25361881-25361960)
chr1 (229-258)||(41877505-41877534)
chr1 (180-261)||(9828036-9828118)
chr1 (228-288)||(10577769-10577829)
chr1 (235-271)||(18556497-18556533)
chr1 (197-261)||(25452152-25452215)
chr1 (243-303)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (228-303)||(8383207-8383282)
chr3 (191-290)||(5441029-5441128)
chr3 (178-267)||(8039818-8039908)
chr3 (229-288)||(24205076-24205135)
chr3 (237-303)||(8842280-8842346)
chr3 (207-272)||(5407261-5407325)
chr3 (228-288)||(28917966-28918026)
chr3 (229-288)||(4991002-4991061)
chr3 (235-294)||(10335327-10335386)
chr3 (180-303)||(25064859-25064981)
chr3 (228-303)||(55401025-55401100)
chr3 (228-302)||(8587055-8587129)
chr3 (229-279)||(9800014-9800064)
chr3 (228-302)||(32429414-32429488)
chr3 (228-280)||(2620087-2620139)
chr3 (228-288)||(15796328-15796388)
chr3 (228-280)||(26492239-26492291)
chr3 (232-271)||(21720746-21720785)
chr3 (146-184)||(4466538-4466576)
chr3 (146-176)||(5440965-5440995)
chr3 (228-278)||(12674535-12674585)
chr3 (146-184)||(13807237-13807275)
chr3 (230-304)||(14223889-14223962)
chr3 (230-271)||(3865592-3865633)
chr3 (230-271)||(12703989-12704030)
chr3 (207-260)||(34307794-34307846)
chr3 (228-288)||(3164059-3164119)
chr3 (228-264)||(4987325-4987361)
chr3 (228-264)||(6525714-6525750)
chr3 (235-271)||(10318075-10318111)
chr3 (230-302)||(14618732-14618804)
chr3 (228-272)||(14832080-14832124)
chr3 (228-264)||(21479107-21479143)
chr3 (229-261)||(25074781-25074813)
chr3 (228-264)||(26290360-26290396)
chr3 (228-280)||(26508083-26508135)
chr3 (148-184)||(27505334-27505370)
chr3 (228-264)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (148-294)||(21002-21149)
scaffold0168 (148-209)||(21217-21278)
scaffold0168 (148-209)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (228-288)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (229-288)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (180-288)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (229-270)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (178-263)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (228-300)||(178853-178925)
scaffold0018 (229-270)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (228-288)||(23293020-23293080)
chr4 (229-264)||(35723420-35723455)
chr4 (230-264)||(17345451-17345485)
chr4 (229-286)||(847918-847975)
chr4 (228-281)||(36635296-36635349)
chr4 (229-288)||(24343472-24343531)
chr4 (180-286)||(30982863-30982967)
chr4 (229-271)||(7012048-7012090)
chr4 (228-309)||(7670625-7670709)
chr4 (228-278)||(20521883-20521933)
chr4 (230-288)||(20633450-20633508)
chr4 (148-271)||(30298928-30299048)
chr4 (148-271)||(30327796-30327916)
chr4 (228-262)||(40613441-40613475)
chr4 (230-299)||(28084475-28084544)
chr4 (228-260)||(1747205-1747237)
chr4 (228-303)||(5775392-5775469)
chr4 (228-271)||(16184801-16184842)
chr4 (148-192)||(18844423-18844467)
chr4 (148-184)||(28470448-28470484)
chr4 (235-303)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (228-288)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (227-303)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (229-288)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (228-271)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (228-261)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (191-273)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (148-176)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (228-280)||(46655-46707)
scaffold0027 (146-194)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 364; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 1 - 438
Target Start/End: Original strand, 38816503 - 38816932
Alignment:
Q  1 cctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgagacttcatattaaaggtgtgtccagtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38816503 cctgaacacacaacaagaaagccttagaaagaaacttcacaaataaatatctcccataaatatctagcaccgagacttcatattaaaggtgtgtgcagtg 38816602  T
Q  101 tccaacagatgtcggatgtcgaagaatatcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 200  Q
    ||||||||||||| | | || || | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38816603 tccaacagatgtcag-tctccaacactatcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacac 38816701  T
Q  201 cgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||    
T  38816702 cgacacataattatactgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg-------cggagtccgtattagtgcttca 38816794  T
Q  301 tagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgta 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38816795 tagtatatggttaccgttcaattattctattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgta 38816894  T
Q  401 aaacccaactatttttaacctgcagcgactctctgttg 438  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38816895 aaacccaactatttttaacctgcagcgactctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 244  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  245 agcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  236 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  278 ccggagtccgtattcgtgcttcatagta 305  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  231 tttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  146 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  236 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 200  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  237 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  237 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  146 aactatgaagcacggacactcctcgaattag 176  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 259
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtg 259  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtca 262  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 255
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  226 gcgattttctcaaattattagcggtgtcgg 255  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 13287433 - 13287493
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||| | |||||| ||||| ||| |||||| ||||||||| ||||||    
T  13287433 gattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgt 13287493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 31084348 - 31084312
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 41995543 - 41995460
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||| ||  ||||||||| |||||| | |||| ||| | |||||| || |||||||||  ||||||||||||||||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattat-gtgattttttcgaattattagttgtgtcggcgtgtcagt 41995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  178 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 260  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  278 ccggagtccgtat 290  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  197 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 245  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  246 gcggtgtcggcgt 258  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 240  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  241 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 308  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 303
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  232 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  197 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  185 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 259  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 188 - 261
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  188 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatc 267  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgt 260  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 246  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 176
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  147 actatgaagcacggacactcctcgaattag 176  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  231 tttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 11061110 - 11061162
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||| ||||    
T  11061110 gattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  148 ctatgaagcacggacactcctcgaattag 176  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 17851456 - 17851396
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||||| |||||||||||||| |||  ||||| |||||| || ||||||||| ||||||    
T  17851456 gattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 22868067 - 22868031
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22868067 gattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  278 ccgg 281  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  278 ccggagtccgt 288  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 288
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 247  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  248 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 301  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 278
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatt 244  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  245 agcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  278 ccggagtccgt 288  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtat 266  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 288
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  185 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 282  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  283 gtccgt 288  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 269  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  197 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 302
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  146 aactatgaagcacggacactcctcgaattag 176  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacac 189  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  184 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 677862 - 677826
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||| | ||||||||||||||||    
T  677862 gattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 4877965 - 4877890
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg--gagtccgtattcgtgcttcatag 303  Q
    |||| ||||||||||||| ||||||| |||||| |||||||| ||||| ||  | ||||||||  |||||||||||    
T  4877965 ttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgtgtccgtatctgtgcttcatag 4877890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 7930330 - 7930254
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    |||||| |||||||||||   |||||||| ||||||| ||||| | |||||||| ||| |||| | |||||||||||    
T  7930330 gattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatccatgcttcatagt 7930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 7996412 - 7996448
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||| |||||||| |||||||    
T  7996412 gattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 8022389 - 8022353
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||| |||||||| |||||||    
T  8022389 gattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 10339160 - 10339196
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 16833333 - 16833281
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||||  |||||||||||||||| || ||| ||||||||    
T  16833333 gattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 17341698 - 17341734
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  17341698 gattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 21395342 - 21395374
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||||||||||||||||||||| ||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 21424836 - 21424872
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21424836 gattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 34290064 - 34290147
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||| ||||| ||||| ||||||||||||||||| | |||| ||| | |||| || |||||||||||  |||||||| |||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattat-gtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 180 - 281
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  278 ccgg 281  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  278 ccggagtcc 286  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 294  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 235 - 303
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 290  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtc 261  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 268  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  195 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 290  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtca 262  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 303
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  185 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 282  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  283 gtccgtattcgtgcttcatag 303  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 2572090 - 2572150
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||  |||||| |||||| ||||||||| ||||||| | ||||||    
T  2572090 gattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgt 2572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 20873094 - 20873042
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||| |  ||||||||||||||| |||||| ||||||||    
T  20873094 gattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 29776108 - 29776013
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 276  Q
    |||||||||| |||   ||||||||| ||||||||| |||| ||  | |||||||||||||||||||| |||||| | ||||| | |||||| ||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattac-gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  192 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 291  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  292 cgtgcttcatag 303  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  239 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  197 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  231 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  231 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  197 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 255  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 288
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  203 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 302
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  237 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 247  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  248 ggtgtcggcgtgtc 261  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 253  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  178 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 266  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcag 263  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 38117193 - 38117261
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||| ||||||||||||| ||||||||||||||      ||| ||||||||| |||||||| |||||||||||    
T  38117193 gattttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  149 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  198 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 286  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  149 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  149 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 195  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  183 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 282  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  283 gtccgtattcgtgcttcatagt 304  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 290  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 896236 - 896200
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagt 896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 10535794 - 10535842
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    ||||||||||||||||| |||||||||||| | |||||| ||| |||||    
T  10535794 attttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 30404884 - 30404936
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| | ||||||    
T  30404884 gattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 31284073 - 31284041
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgt 260  Q
    |||||||||||||||||||| ||||||||||||    
T  31284073 gattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtcc 184  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 42832311 - 42832343
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtc 261  Q
    ||||||||||||||||||||||||||| |||||    
T  42832311 attttctcaaattattagcggtgtcggtgtgtc 42832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 148 - 303
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  148 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 242  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  243 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 287  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  149 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 238  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  239 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 295  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 201  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 272  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 281
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  189 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  188 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 285  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  286 cgt 288  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 249
Target Start/End: Complemental strand, 44482343 - 44482234
Alignment:
Q  146 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaa 238  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| ||||||||||  ||||||| | |||| ||| | |||||||||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat-gtgattttctcaa 44482245  T
Q  239 attattagcgg 249  Q
    ||||| |||||    
T  44482244 attataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 290
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 290  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  203 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 303
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 264
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtca 262  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 294  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 264
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  226 gcgattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 258  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 258
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgt 258  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 9828118 - 9828036
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataa--ttataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||| ||||| ||||| ||||||||||||||  ||| | |||| ||| | |||||| |||||||||||| ||||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattat-gtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||||| |||  |||||| ||||||||||||| || |||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 25452152 - 25452215
Alignment:
Q  197 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 261  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||||| |||| ||| ||||    
T  25452152 acaccgacacataattacactgaattat-gagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  243 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  191 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 289  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 267
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  178 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 267  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  237 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 207 - 272
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  207 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 272  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 294  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  180 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  280 ggagtccgtattcgtgcttcatag 303  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 279  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 302
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  232 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  146 aactatgaagcacggacactcctcgaattagccatgtcc 184  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 176
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  146 aactatgaagcacggacactcctcgaattag 176  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  146 aactatgaagcacggacactcctcgaattagccatgtcc 184  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 304  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  207 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 260  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 3164059 - 3164119
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| |||||| |||| || | |||||| ||||||||| ||||||    
T  3164059 gattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 4987325 - 4987361
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4987325 gattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 6525714 - 6525750
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||||||||||| | |||||||    
T  6525714 gattttctcaaattattagcggtgtcgacatgtcagt 6525750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 10318075 - 10318111
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 14618804 - 14618732
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 302  Q
    |||||| |||||||||| |||||| |||| |||||  ||||| |||||| || |||||||  |||||||||||    
T  14618804 ttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgtacccgtgcttcata 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 14832124 - 14832080
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 272  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  14832124 gattttttcaaattattagctgtatcggcgtgtccgtatccgtgc 14832080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 21479143 - 21479107
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21479143 gattttttcaaattattagctgtgtcggcgtgtcagt 21479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 25074813 - 25074781
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtc 261  Q
    ||||||||||||||||| |||||||||||||||    
T  25074813 attttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 26290396 - 26290360
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||  |||||||||||||||||    
T  26290396 gattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 26508135 - 26508083
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||||| ||||| ||||||||||||| ||  ||||||||    
T  26508135 gattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtcc 184  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 40052357 - 40052321
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  40052357 gattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 294
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 245  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  246 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 294  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 209  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 209  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 288
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  180 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  278 ccggagtccgt 288  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  178 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 263  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 300  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 270  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 264
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 264
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagt 264  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 286  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 281  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  180 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 277  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  278 ccggagtcc 286  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 309  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 278  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 245  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  246 gcggtgtcggcgtgtcagtatccgtg 271  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 245  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  246 gcggtgtcggcgtgtcagtatccgtg 271  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtca 262  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  230 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 299  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 1747237 - 1747205
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgt 260  Q
    ||||||||||| |||||||||||||||||||||    
T  1747237 gattttctcaatttattagcggtgtcggcgtgt 1747205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 5775392 - 5775469
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagta---tccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||||||||  |||||||  |||||||||   |||||| ||||||| | |||| ||||||||||||||||    
T  5775392 gattttctcaaattattaatggtgtcgt-gtgtcagtagtgtccgtgtcgtgtcctgtgtccatattcgtgcttcatag 5775469  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 16184842 - 16184801
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  16184842 gattttctcaaattattagcg--gtcggcgtgtcagtgtccgtg 16184801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 192  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  148 ctatgaagcacggacactcctcgaattagccatgtcc 184  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  235 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 496 - 556
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  227 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 303  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  229 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 288  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 271  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtc 261  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  191 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 273  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 176
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  148 ctatgaagcacggacactcctcgaattag 176  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 46707 - 46655
Alignment:
Q  228 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 280  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||    
T  46707 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  146 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 194  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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