View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17072_high_17 (Length: 355)
Name: NF17072_high_17
Description: NF17072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17072_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 4769450 - 4769687
Alignment:
| Q |
12 |
gaatatattttagattaaagattgaaatattattaagggtaacaaatctatctatctacttattaatacagcctccaaatcagttttctgcaacatcaat |
111 |
Q |
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| T |
4769450 |
gaatatattttagattaaagattgaaatattattaagggtaacaaatctatctatctacttattaatacagcctccaaatcagttttctgcaacatcaat |
4769549 |
T |
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| Q |
112 |
actttgattgccaactaatccaattattaatttccaagtcaattaaaatctgagt--tgtcatccatccacctttatatctcttattttgtccctctcat |
209 |
Q |
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| T |
4769550 |
actttgattgccaactaatccaattattaatttccaagtcaattaaaatctgagttgtgtcatccatccacctttacatctcttattttgtacctctcat |
4769649 |
T |
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| Q |
210 |
ttatgtagactatacgtaattaggaatatagcaaatgc |
247 |
Q |
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| T |
4769650 |
ttatgtagactgtatgcaattaggaatatagcaaatgc |
4769687 |
T |
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