View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17072_low_20 (Length: 346)
Name: NF17072_low_20
Description: NF17072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17072_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 5076872 - 5076554
Alignment:
| Q |
1 |
taagccaccaaaacatcttctaattttaacatatatcggtagctctaagatgaatactcaacttacttttatgtcattcttctagtatcatctttcttat |
100 |
Q |
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| T |
5076872 |
taagccaccaaaacatcttctaattctaacatatatcggtagctctaggatgaatactcaacttacttctatgtcattcttctagtatcatctttcttat |
5076773 |
T |
|
| Q |
101 |
ttttgaaacattaggcacacattccttgtccctgaacttcataataccatcttcttctatgaaatcatttcatttaccatgactaatgagttacaaattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5076772 |
ttttgaaacattaggcacacattccttgtccctgaacttcataataccatcttcttctatgaaatcatttcatttaccatgactaatgagttacaaattt |
5076673 |
T |
|
| Q |
201 |
gattcttcaggtattaatcatctttcttgatcttcttttatttgcaccaacaaattacttattattttcaacattcaaggtctgatacttttattcgtta |
300 |
Q |
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| T |
5076672 |
gcttcttcgggtattaatcatctttcttgatcttcttttatttgcaccaacaaattacttattattttcaacatttaaggtctgatactcttattcgtta |
5076573 |
T |
|
| Q |
301 |
atttgaaactcaaactcat |
319 |
Q |
| |
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||||||||||||||||||| |
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| T |
5076572 |
atttgaaactcaaactcat |
5076554 |
T |
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