View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17073_low_8 (Length: 269)

Name: NF17073_low_8
Description: NF17073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17073_low_8
NF17073_low_8
[»] chr8 (30 HSPs)
chr8 (1-259)||(12025747-12025993)
chr8 (4-163)||(42854073-42854232)
chr8 (1-143)||(42469793-42469935)
chr8 (17-163)||(11523805-11523951)
chr8 (17-163)||(12491220-12491366)
chr8 (1-163)||(18125227-18125388)
chr8 (1-163)||(21121200-21121362)
chr8 (17-163)||(36545203-36545349)
chr8 (17-163)||(36565323-36565469)
chr8 (17-163)||(40813378-40813524)
chr8 (17-163)||(36395031-36395177)
chr8 (4-163)||(8932756-8932916)
chr8 (16-156)||(37077812-37077952)
chr8 (1-163)||(39946911-39947073)
chr8 (1-145)||(2796625-2796769)
chr8 (15-162)||(26904987-26905133)
chr8 (15-84)||(14742159-14742228)
chr8 (1-116)||(2027631-2027746)
chr8 (4-63)||(25288918-25288977)
chr8 (4-63)||(25300253-25300312)
chr8 (1-56)||(15215478-15215533)
chr8 (17-63)||(25473485-25473531)
chr8 (1-45)||(44529397-44529441)
chr8 (1-44)||(44047598-44047641)
chr8 (14-63)||(25439479-25439528)
chr8 (1-50)||(26363655-26363703)
chr8 (55-163)||(18751996-18752104)
chr8 (17-93)||(28269761-28269836)
chr8 (1-45)||(29520821-29520865)
chr8 (19-63)||(45041399-45041443)
[»] chr7 (49 HSPs)
chr7 (1-163)||(43281728-43281890)
chr7 (1-163)||(29650438-29650600)
chr7 (1-159)||(24598253-24598411)
chr7 (1-163)||(12841341-12841503)
chr7 (17-163)||(33349888-33350034)
chr7 (1-163)||(43491362-43491524)
chr7 (4-163)||(44855241-44855400)
chr7 (1-163)||(45836548-45836708)
chr7 (17-163)||(11594014-11594160)
chr7 (1-163)||(13859074-13859236)
chr7 (17-163)||(37617999-37618145)
chr7 (17-163)||(49029330-49029476)
chr7 (1-163)||(2885788-2885950)
chr7 (17-163)||(31005277-31005423)
chr7 (17-163)||(34869474-34869620)
chr7 (17-155)||(35559075-35559213)
chr7 (17-163)||(35906283-35906429)
chr7 (17-163)||(36652046-36652192)
chr7 (1-162)||(31682668-31682829)
chr7 (1-163)||(32631630-32631780)
chr7 (4-163)||(7273154-7273313)
chr7 (17-163)||(39906454-39906598)
chr7 (17-163)||(46355938-46356084)
chr7 (1-163)||(38607058-38607208)
chr7 (17-163)||(6374922-6375068)
chr7 (1-164)||(36869310-36869473)
chr7 (17-163)||(22349674-22349820)
chr7 (70-163)||(33073006-33073099)
chr7 (1-160)||(15682231-15682390)
chr7 (1-100)||(40979994-40980093)
chr7 (1-163)||(23404471-23404633)
chr7 (17-100)||(38900074-38900157)
chr7 (1-144)||(31681086-31681226)
chr7 (1-60)||(27648937-27648996)
chr7 (17-63)||(21078071-21078117)
chr7 (4-82)||(48919247-48919325)
chr7 (4-63)||(21517449-21517508)
chr7 (4-84)||(9210773-9210853)
chr7 (104-163)||(33139208-33139267)
chr7 (19-161)||(1011103-1011245)
chr7 (76-162)||(25579218-25579304)
chr7 (1-63)||(35922407-35922469)
chr7 (1-63)||(36239862-36239924)
chr7 (1-63)||(45601630-45601692)
chr7 (113-163)||(46014359-46014409)
chr7 (1-46)||(34035220-34035265)
chr7 (11-63)||(18795841-18795893)
chr7 (1-45)||(37976407-37976451)
chr7 (5-45)||(42969870-42969910)
[»] chr4 (50 HSPs)
chr4 (9-163)||(27450253-27450407)
chr4 (1-163)||(32479092-32479254)
chr4 (17-163)||(48174175-48174321)
chr4 (17-163)||(56375344-56375490)
chr4 (17-159)||(4440911-4441053)
chr4 (1-163)||(27983247-27983409)
chr4 (17-163)||(31959896-31960042)
chr4 (17-163)||(52569597-52569743)
chr4 (17-163)||(23906379-23906523)
chr4 (17-159)||(1777099-1777241)
chr4 (17-163)||(33190930-33191076)
chr4 (17-163)||(33227263-33227409)
chr4 (17-163)||(436283-436429)
chr4 (1-163)||(39708487-39708649)
chr4 (17-163)||(53707848-53707994)
chr4 (15-163)||(39100616-39100763)
chr4 (12-163)||(43433978-43434129)
chr4 (1-163)||(20192087-20192249)
chr4 (17-163)||(48622625-48622771)
chr4 (1-163)||(50287016-50287178)
chr4 (1-159)||(26037571-26037729)
chr4 (1-147)||(47265261-47265407)
chr4 (1-163)||(8286485-8286655)
chr4 (4-133)||(50679588-50679717)
chr4 (1-84)||(21528421-21528504)
chr4 (17-156)||(46582907-46583047)
chr4 (1-163)||(37797906-37798067)
chr4 (17-124)||(21236951-21237058)
chr4 (1-163)||(20601718-20601874)
chr4 (1-163)||(20821074-20821235)
chr4 (1-163)||(37773517-37773679)
chr4 (1-106)||(51811344-51811449)
chr4 (1-84)||(6957731-6957814)
chr4 (1-84)||(7947070-7947153)
chr4 (4-63)||(16003080-16003139)
chr4 (1-163)||(28236237-28236398)
chr4 (2-55)||(1793624-1793677)
chr4 (17-84)||(12494796-12494863)
chr4 (14-163)||(20591384-20591528)
chr4 (1-63)||(28550521-28550583)
chr4 (17-62)||(50862799-50862844)
chr4 (1-63)||(31043226-31043288)
chr4 (1-46)||(19154929-19154974)
chr4 (1-145)||(45204905-45205048)
chr4 (4-63)||(41009288-41009347)
chr4 (1-63)||(51421884-51421946)
chr4 (1-81)||(4548158-4548238)
chr4 (15-159)||(28351617-28351761)
chr4 (4-48)||(41340616-41340660)
chr4 (1-45)||(53518389-53518433)
[»] chr3 (35 HSPs)
chr3 (1-163)||(35033200-35033362)
chr3 (1-163)||(22126-22288)
chr3 (1-163)||(5168886-5169048)
chr3 (1-163)||(25191431-25191593)
chr3 (1-163)||(47233662-47233824)
chr3 (17-163)||(52138854-52139000)
chr3 (17-160)||(54279077-54279220)
chr3 (17-163)||(28245491-28245637)
chr3 (1-163)||(48508289-48508451)
chr3 (17-163)||(51447799-51447938)
chr3 (1-156)||(53519653-53519796)
chr3 (34-163)||(33272122-33272250)
chr3 (70-163)||(38060485-38060578)
chr3 (1-66)||(53262292-53262357)
chr3 (1-163)||(38850174-38850337)
chr3 (17-105)||(12096787-12096875)
chr3 (1-163)||(39235192-39235354)
chr3 (1-152)||(48953485-48953638)
chr3 (1-63)||(52156150-52156212)
chr3 (14-163)||(19676160-19676308)
chr3 (1-63)||(38060868-38060930)
chr3 (1-127)||(54425031-54425157)
chr3 (1-133)||(45289157-45289289)
chr3 (48-163)||(45728201-45728319)
chr3 (1-63)||(49042090-49042153)
chr3 (1-63)||(15296061-15296123)
chr3 (1-63)||(54128533-54128595)
chr3 (14-163)||(3186822-3186971)
chr3 (4-161)||(30294190-30294347)
chr3 (1-58)||(54422909-54422966)
chr3 (1-45)||(311375-311419)
chr3 (1-49)||(44571595-44571643)
chr3 (14-133)||(19162666-19162785)
chr3 (1-44)||(38431021-38431064)
chr3 (19-63)||(17022756-17022800)
[»] chr1 (37 HSPs)
chr1 (1-163)||(696323-696485)
chr1 (1-163)||(4001521-4001683)
chr1 (1-163)||(8391826-8391988)
chr1 (1-163)||(25979297-25979459)
chr1 (17-163)||(1210799-1210945)
chr1 (1-163)||(34792415-34792577)
chr1 (1-135)||(37311821-37311955)
chr1 (17-164)||(30202212-30202359)
chr1 (17-164)||(49347475-49347622)
chr1 (17-163)||(8671972-8672118)
chr1 (17-163)||(4029176-4029322)
chr1 (17-163)||(22090150-22090296)
chr1 (17-163)||(51440847-51440993)
chr1 (17-163)||(51602110-51602256)
chr1 (1-163)||(15085988-15086138)
chr1 (1-163)||(32082823-32082973)
chr1 (18-163)||(32231037-32231182)
chr1 (27-163)||(9592788-9592924)
chr1 (17-163)||(43240461-43240607)
chr1 (1-154)||(39318193-39318345)
chr1 (1-163)||(38807737-38807899)
chr1 (1-108)||(4415457-4415565)
chr1 (1-102)||(52921195-52921296)
chr1 (15-155)||(18469162-18469302)
chr1 (5-53)||(46423283-46423331)
chr1 (1-63)||(27520273-27520335)
chr1 (1-63)||(32079241-32079303)
chr1 (11-163)||(34827179-34827332)
chr1 (14-163)||(52561668-52561817)
chr1 (1-45)||(24020333-24020377)
chr1 (1-55)||(10200372-10200426)
chr1 (14-63)||(36623963-36624012)
chr1 (1-128)||(9599460-9599587)
chr1 (1-63)||(7762503-7762565)
chr1 (1-63)||(29128937-29128999)
chr1 (1-63)||(39140669-39140731)
chr1 (1-45)||(4707286-4707330)
[»] chr2 (33 HSPs)
chr2 (1-163)||(38429938-38430100)
chr2 (1-160)||(39029638-39029797)
chr2 (1-159)||(11992174-11992332)
chr2 (1-163)||(41763109-41763270)
chr2 (1-163)||(41197293-41197456)
chr2 (1-163)||(36183505-36183667)
chr2 (1-163)||(45367691-45367853)
chr2 (1-163)||(12734753-12734916)
chr2 (17-159)||(4807653-4807795)
chr2 (19-162)||(3243737-3243880)
chr2 (1-163)||(25834735-25834894)
chr2 (17-163)||(451730-451876)
chr2 (17-163)||(2610642-2610788)
chr2 (17-163)||(7326242-7326388)
chr2 (17-163)||(38452768-38452913)
chr2 (17-163)||(3866126-3866272)
chr2 (4-163)||(23997668-23997815)
chr2 (22-163)||(24583719-24583860)
chr2 (17-163)||(8180834-8180980)
chr2 (1-146)||(28508749-28508894)
chr2 (1-163)||(18424443-18424605)
chr2 (1-113)||(31959625-31959737)
chr2 (17-100)||(35643065-35643148)
chr2 (1-60)||(30743686-30743745)
chr2 (1-163)||(6237819-6237981)
chr2 (5-63)||(9996696-9996754)
chr2 (1-63)||(12882111-12882173)
chr2 (1-59)||(30306190-30306248)
chr2 (1-63)||(45543139-45543200)
chr2 (1-37)||(3635389-3635425)
chr2 (1-45)||(9496038-9496082)
chr2 (1-63)||(41545559-41545621)
chr2 (17-45)||(227361-227389)
[»] chr6 (26 HSPs)
chr6 (1-163)||(35043507-35043669)
chr6 (4-163)||(5631876-5632035)
chr6 (1-163)||(21351903-21352065)
chr6 (5-163)||(5258218-5258376)
chr6 (1-163)||(608211-608377)
chr6 (1-163)||(30031310-30031472)
chr6 (1-161)||(20427703-20427862)
chr6 (17-163)||(28085430-28085576)
chr6 (1-161)||(9706826-9706986)
chr6 (17-164)||(32755974-32756121)
chr6 (1-152)||(5080905-5081056)
chr6 (1-149)||(12890643-12890791)
chr6 (48-163)||(7133800-7133915)
chr6 (48-163)||(7136723-7136838)
chr6 (70-163)||(10099994-10100087)
chr6 (1-163)||(14030861-14031011)
chr6 (4-163)||(33497016-33497172)
chr6 (1-163)||(9593774-9593934)
chr6 (1-54)||(3206525-3206578)
chr6 (17-93)||(34143847-34143923)
chr6 (17-93)||(34156463-34156539)
chr6 (4-163)||(28026896-28027055)
chr6 (1-63)||(24665965-24666027)
chr6 (79-163)||(30679460-30679544)
chr6 (1-63)||(10098960-10099022)
chr6 (17-45)||(34934912-34934940)
[»] chr5 (27 HSPs)
chr5 (1-163)||(3301898-3302060)
chr5 (1-163)||(38685021-38685183)
chr5 (1-128)||(13561452-13561579)
chr5 (17-163)||(4496438-4496584)
chr5 (1-163)||(14665768-14665930)
chr5 (1-163)||(16347444-16347606)
chr5 (17-163)||(1287661-1287807)
chr5 (17-163)||(12492466-12492612)
chr5 (1-125)||(14911264-14911388)
chr5 (17-163)||(2075555-2075702)
chr5 (1-163)||(20456827-20456989)
chr5 (17-163)||(24178564-24178710)
chr5 (17-159)||(2915577-2915719)
chr5 (17-163)||(28976941-28977087)
chr5 (17-163)||(10639358-10639502)
chr5 (1-163)||(38501484-38501646)
chr5 (1-163)||(1275318-1275480)
chr5 (17-108)||(34273122-34273213)
chr5 (17-84)||(29816515-29816582)
chr5 (1-63)||(16913949-16914011)
chr5 (1-63)||(28036-28098)
chr5 (2-54)||(31220546-31220598)
chr5 (1-63)||(28276392-28276454)
chr5 (1-44)||(5558314-5558357)
chr5 (4-55)||(39040918-39040969)
chr5 (1-63)||(36215642-36215704)
chr5 (17-73)||(2552926-2552982)
[»] scaffold0570 (1 HSPs)
scaffold0570 (17-163)||(1030-1176)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-108)||(16687-16794)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-163)||(31522-31668)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-163)||(86675-86837)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-159)||(82779-82934)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-147)||(4706-4852)
[»] scaffold0113 (1 HSPs)
scaffold0113 (17-163)||(11629-11775)
[»] scaffold0157 (1 HSPs)
scaffold0157 (17-84)||(25614-25681)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-163)||(4363-4499)
[»] scaffold0199 (1 HSPs)
scaffold0199 (5-63)||(14737-14795)
[»] scaffold1318 (1 HSPs)
scaffold1318 (17-63)||(485-531)


Alignment Details
Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 12025993 - 12025747
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||            ||||||||||||||||||||| ||||||    
T  12025993 ttctatcaaaaaccatatttggatccaacttattgacctctaaatcttttctaatggttt------------tcttaggtcttcatttacctcttttaac 12025906  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatgattaacatcattgtcctgagatcattgattaacattt 200  Q
    |||||||||||| |||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  12025905 ctgactcttctctatttgatctactcttcttacaacggcatctacggatcttctctctaaatgattaacattattgtcctgagatcattgattaacattt 12025806  T
Q  201 ccnnnnnnnaacggtatgtatcagtgcttcctatattctttctgacatggctacctatg 259  Q
    ||       |||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  12025805 cctttttttaacaatatgtatcggtgcttcctatattctttctgacatggctacctatg 12025747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 42854073 - 42854232
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||    
T  42854073 tatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctg 42854172  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  42854173 actctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatg 42854232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42469793 - 42469935
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  42469793 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 42469892  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatct 143  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  42469893 ctgactctcctccatttgatctactcttcttacaacggcatct 42469935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 11523805 - 11523951
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  11523805 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 11523904  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  11523905 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 11523951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 12491220 - 12491366
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||||| |||||| |||||| ||||||| || ||||    
T  12491220 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcataggtcttcatctacctcttttaacttgactctccttcatt 12491319  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  12491320 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 12491366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 18125388 - 18125227
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||  ||||  ||||||| | | |||||| ||||||    
T  18125388 ttctatcataaatcatatttggatccaactcattgacttttaaatcttttctaatggtttctctaatagtttttctaggtctccctctacctc-tttaac 18125290  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||||| ||||||| ||||||| || ||||||||||||||||||||||||||    
T  18125289 ccgactctcctccatttgatctactattcttacgacggcatctacgggtcttctctctacatg 18125227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21121362 - 21121200
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||| ||||||||||||||||| |||||||  |||||||||||||||| |||   |||||||||||| | | |||||| ||||||    
T  21121362 ttctatcataaaccatattaggatccaactcattgacttctaaatcctttctaatggtttctctaatagatttcttaggtctccctctacctcttttaac 21121263  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || |||||  ||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  21121262 ctaactctcgtccatttgatctactcttcttacgacggcatctacgggtcttctctctacatg 21121200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 36545349 - 36545203
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | ||| || |||||| ||||| | |||||||    
T  36545349 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacgtcttttaacttgactatcctccatt 36545250  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  36545249 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 36545203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 36565323 - 36565469
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  36565323 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 36565422  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||||| || |||||||||||| |||||||||||||    
T  36565423 tgatctacccttcttaccacggcatctacgggtattctctctacatg 36565469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 40813524 - 40813378
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||| |||||| ||||||| |||||||    
T  40813524 atttggatccaactcactgacctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatt 40813425  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||| | |||||||||||||||    
T  40813424 tgatctactcttcttaccacggcatctacagatcttctctctacatg 40813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 36395031 - 36395177
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||| |||||||||||||||||||  ||||||| |||||||| |||  ||||| ||||||||| | |||||| |||||| ||||| | |||||||    
T  36395031 atttggatctaactcattgacctctaaatcctttctaacggtttctcaaatagttttcctaggtcttcctatacctcttttaacttgactttcctccatt 36395130  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||| |||||||||||||||||    
T  36395131 tgatctactcttcttaccacggcatctacaggtcttctctctacatg 36395177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 8932916 - 8932756
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||||||  ||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||| | |||||| |||||| ||    
T  8932916 tatcaaaagccatattttgatccaactcattaacctttaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacttg 8932817  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatct-acgggtcttctctctacatg 163  Q
    |||||  ||||||| || ||||||||||||||  |||| | |||| |||||| ||||||||    
T  8932816 actctcttccatttgatttactcttcttacaatggcatttaacggatcttctttctacatg 8932756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 37077952 - 37077812
Alignment:
Q  16 tatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccat 115  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||  || |||||| ||||||||||| |||||  ||| ||| |||||| ||||||    
T  37077952 tatttggatccaactcattgacctctaaatcctttctaatggtttctcttataattttcctaggtcttcatctacctattttgacccgactctcctccat 37077853  T
Q  116 ttaatctactcttcttacaaccgcatctacgggtcttctct 156  Q
    || ||||||||||||||| || ||||||| ||||| |||||    
T  37077852 ttgatctactcttcttacgacggcatctatgggtcctctct 37077812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39947073 - 39946911
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || |||||||| |||||||||||||||||||| ||||||||||||||||| |||  ||||  |||||| || | |||||| | ||||    
T  39947073 ttctatcataaaccaaatttggattcaactcattgacctctaaatcttttctaatggtttctctaatagtttttctaggtcgtcctctacctcttctaac 39946974  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||| ||| |||||||| ||||||||||||||| || |||||||| |||||||| ||||||||    
T  39946973 ttgagtctcctccatttgatctactcttcttacgacggcatctacaggtcttctttctacatg 39946911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 2796769 - 2796625
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| || |||||  | ||||| ||||||||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||| ||||||    
T  2796769 ttctatcaaaaaccaaatttgagttcaactaattgacctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaac 2796670  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctac 145  Q
     ||||||| |||||||| || ||||||||||||||  ||||||||    
T  2796669 atgactctcctccatttgatttactcttcttacaatggcatctac 2796625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 26904987 - 26905133
Alignment:
Q  15 atatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcca 114  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||| |||  ||||| ||||||| | | |||||| ||| | ||||||||  ||||    
T  26904987 atatttgg-tccaacttattgacctctaaatcttttctaatggtttctctaatagttttcctaggtctccctctacctctttttatctgactctcttcca 26905085  T
Q  115 tttaatctactcttcttacaaccgcatctacgggtcttctctctacat 162  Q
    ||| |||||||||||||||||| |||| || | || ||||||||||||    
T  26905086 tttgatctactcttcttacaacggcatgtatgagttttctctctacat 26905133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 14742159 - 14742228
Alignment:
Q  15 atatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  14742159 atatttggatccaactcattgacttctaaatcttttctaatggtttctcgaatggttttcttaggtcttc 14742228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2027746 - 2027631
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||| ||  |||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  2027746 ttctatcataaaccatatttgaatataactcattgacctctaaatcatttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 2027647  T
Q  101 ctgactcttctccatt 116  Q
    |||||||| |||||||    
T  2027646 ctgactctcctccatt 2027631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 25288977 - 25288918
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  25288977 tatcataaaccatatttggatccaactcattgacctctaaatcctttctaaaggtttctc 25288918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 25300312 - 25300253
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  25300312 tatcataaaccatatttggatccaactcattgacctctaaatcctttctaaaggtttctc 25300253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15215478 - 15215533
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatg 56  Q
    |||||| ||||| |||||||||||| |||||||||| |||||||| ||||||||||    
T  15215478 ttctattaaaaaccatatttggatcaaactcattgatctctaaatcttttctaatg 15215533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 25473485 - 25473531
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  25473485 atttggatcaaactcattgacctctaaatcctttctaatggtttctc 25473531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44529441 - 44529397
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| || |||||||||||||||||||||||||||||    
T  44529441 ttctatcataaaccaaatttggatccaactcattgacctctaaat 44529397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44047598 - 44047641
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaa 44  Q
    |||||||| ||| || ||||||||||||||||||||||||||||    
T  44047598 ttctatcataaaccaaatttggatccaactcattgacctctaaa 44047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 25439528 - 25439479
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| |||||||||||||| ||||||||  |||| |||||||||||    
T  25439528 catatttgaatccaactcattgatctctaaatcctttcgaatggtttctc 25439479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26363703 - 26363655
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatatttt 50  Q
    |||||||| ||| ||||||| |||||||||| ||||||||||||||||||    
T  26363703 ttctatcataaaccatatttagatccaactc-ttgacctctaaatatttt 26363655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 18751996 - 18752104
Alignment:
Q  55 tggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttct 154  Q
    ||||||| | |||| |||| |||||| ||| | |||||| ||||| || ||| || ||||||| ||| |||||| | ||||| ||||||| || || |||    
T  18751996 tggtttcgctaatggtttttttaggtattcctctacctcttttaatctaactattttccatttgatccactcttttaacaacggcatctatggatcctct 18752095  T
Q  155 ctctacatg 163  Q
    |||||||||    
T  18752096 ctctacatg 18752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 28269761 - 28269836
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctc 93  Q
    |||||||||||||||||| ||||||||||  || ||||| |||||||  || |||||  ||||||||||| ||||||    
T  28269761 atttggatccaactcattaacctctaaat-cttgctaatagtttctcttataatttttctaggtcttcatatacctc 28269836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29520865 - 29520821
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||    
T  29520865 ttctatcataaaccatatttggatccaactcattaatctctaaat 29520821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 45041399 - 45041443
Alignment:
Q  19 ttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||||||||||| |||||||||| ||| ||||| |||||||    
T  45041399 ttggatccaactcattaacctctaaatctttcctaatagtttctc 45041443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43281890 - 43281728
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  43281890 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 43281791  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  43281790 ctgactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatg 43281728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 29650600 - 29650438
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||    
T  29650600 ttctatcaaaaaccatatttggatcaaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggttttcctttacctcttttaac 29650501  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  29650500 ctgactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatg 29650438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 24598253 - 24598411
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  24598253 ttctatcaaaaatcatatttggattcaactcattgacctctaaatcttttctaatggtttctcgaatgattttcttaggtcttcctctacctcttttaac 24598352  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    |||||||  || ||||| |||||||||||||||||| |||||||||||||| |||||||    
T  24598353 ctgactcaccttcatttgatctactcttcttacaacggcatctacgggtctgctctcta 24598411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 12841341 - 12841503
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || |||||||| ||||||||||||||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||| ||||||    
T  12841341 ttctatcataaaccaaatttggatacaactcattgacctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaac 12841440  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  12841441 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatg 12841503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 33349888 - 33350034
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  33349888 atttggatccaactcattgacctctaaatcatttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 33349987  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  33349988 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 33350034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43491524 - 43491362
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||  || |||||| ||||||||| | |||||| ||| ||    
T  43491524 ttctatcataaatcatatttggatccaacttattgacctctaaattctttctaatggtttctcttataattttcctaggtcttcctctacctcttttgac 43491425  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | ||| ||||||||||| || ||||||||||||||||||||||||||    
T  43491424 ctgactctcctccatctgatcaactcttcttacgacggcatctacgggtcttctctctacatg 43491362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 44855241 - 44855400
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| ||||||||| | ||| || |||||| ||    
T  44855241 tatcataaaccaaatttggatccaactcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacttcttttaacttg 44855340  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| |||||||| ||||||||||||||  || ||||||||||||||||||||||||||    
T  44855341 actctcctccatttgatctactcttcttatgacggcatctacgggtcttctctctacatg 44855400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 45836548 - 45836708
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  || || ||||||| | | ||||||||  |||    
T  45836548 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttgtcctaggtctccctctacctcat--aac 45836645  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  45836646 ctaactctcctccatttgatctactcttcttacaacggcatctacgggtcttctctctacatg 45836708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 11594160 - 11594014
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  11594160 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 11594061  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| |  ||||||||||||||||||||||||||    
T  11594060 tgatctactcttcttaccatggcatctacgggtcttctctctacatg 11594014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 13859074 - 13859236
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| | ||||    
T  13859074 ttctatcataaaccaaatttggatccaactcattggcctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaac 13859173  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  13859174 ttgactctcctccatttgatctactcttcttacgacagcatctacgggtcttctctctacatg 13859236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 37618145 - 37617999
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  37618145 atttggatccaacttattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 37618046  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  37618045 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 37617999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 49029476 - 49029330
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  49029476 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 49029377  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||| || |||||| || ||||||||||||||||||||||||||    
T  49029376 tgatctattcgtcttaccacggcatctacgggtcttctctctacatg 49029330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 2885788 - 2885950
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||| ||||||||||||||| ||||||  ||||||||||||||||  ||  ||||| ||||||||| | |||||| ||| ||    
T  2885788 ttctatcataaaccatatttgggtccaactcattgaccactaaatcatttctaatggtttctcttatagttttcctaggtcttcttctacctcttttgac 2885887  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||    
T  2885888 ctgactctcctccatctgatctactcttcgtacaacggcatctacggatcttctctctacatg 2885950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 31005423 - 31005277
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||| |||| |||  |||| ||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  31005423 atttggatccaactcattgatctctgaatcctttcaaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 31005324  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  31005323 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 31005277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 34869620 - 34869474
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| | |||||    
T  34869620 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctccaccatt 34869521  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
      ||||||||||||||| || |||| |||||||||||||||||||||    
T  34869520 ggatctactcttcttaccacggcatttacgggtcttctctctacatg 34869474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 35559075 - 35559213
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  35559075 atttggatccaactcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 35559174  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctc 155  Q
    | ||||||||||||||| ||  |||||| ||||||||||    
T  35559175 tgatctactcttcttaccacgacatctaggggtcttctc 35559213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 35906283 - 35906429
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| ||||||     
T  35906283 atttggatccaactcattgacctcgaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccata 35906382  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | || |||||||||||| || ||||||||||||||||||||||||||    
T  35906383 tgatatactcttcttaccacggcatctacgggtcttctctctacatg 35906429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 36652192 - 36652046
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||| |||||||||||||||| |||  |||||||||||||||| |||  ||||||||||||||| | |||||| |||||| ||||| | ||| |||    
T  36652192 atttggattcaactcattgacctctgaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactatcctctatt 36652093  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  36652092 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 36652046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 31682668 - 31682829
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || || ||||||||| ||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| | ||||    
T  31682668 ttctatcataaaccaaatatggatccaattcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaac 31682767  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacat 162  Q
     ||||||| |||||||| ||||||||||||||  || |||||||||||||||||||||||||    
T  31682768 ttgactctcctccatttgatctactcttcttatgacggcatctacgggtcttctctctacat 31682829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32631780 - 32631630
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||            |||||||||||| | |||||| ||||||    
T  32631780 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt------------tcttaggtcttcctctacctcttttaac 32631693  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||| | |||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||    
T  32631692 ctgactatcctccatttgatccactcttctaacaacggcatctacgggtcttctctctacatg 32631630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 7273313 - 7273154
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||  ||  ||||| ||||||||| | |||||| ||| |||||    
T  7273313 tatcataaaccatatttgaatccaactcattgacctctgaatattttctaatggtttctcttatagttttcataggtcttcctctacctcttttgacctg 7273214  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| ||||||  |||||||||| | ||| || ||| |||||| |||||||||||||||    
T  7273213 actctcctccatccaatctactctacatacgacggcacctacggatcttctctctacatg 7273154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 39906454 - 39906598
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||| ||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||  |||||||    
T  39906454 atttggatccaagtcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactc--ctccatt 39906551  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  39906552 tgatctactcttcttaccacgacatctatgggtcttctctctacatg 39906598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 46355938 - 46356084
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||  |||  ||||| ||||| ||| | |||||| |||||| ||||||| |||||||    
T  46355938 atttggatccaactcattgacctttaaatcctttctaatggtttctttaatagttttcctaggttttcctctacctcttttaacttgactctcctccatt 46356037  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||||| ||||||||||||||||    
T  46356038 tgatctactcttcttaccacaacatctacgtgtcttctctctacatg 46356084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38607208 - 38607058
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||            |||||||||||| | | |||| | ||||    
T  38607208 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcctttctaatggttt------------tcttaggtcttcctctccctcttctaac 38607121  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  38607120 gtgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatg 38607058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 6375068 - 6374922
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||| |||  ||||| ||| ||||| | |||||| |||||| ||| ||| || ||||    
T  6375068 atttggatccaactcactgacctctaaattctttctaatggtttctctaatagttttcctagatcttcctctacctcttttaacttgattctcctacatt 6374969  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||||| || |||||||| |||||||||||||||||    
T  6374968 tgatctacccttcttaccacagcatctactggtcttctctctacatg 6374922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 36869310 - 36869473
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||||| ||||| ||| ||||||||||| |||||||  |||||||||||||||  |||  |||||  |||||||| | |||||  | ||||    
T  36869310 ttctatcataaatcaaatttgaatctaactcattgacatctaaatcctttctaatggtttctttaatagttttcccaggtcttcctctacctattctaac 36869409  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatga 164  Q
     ||||||| |||||||| |||||||||||||   || |||||||||||||||||||||||||||    
T  36869410 ttgactctcctccatttgatctactcttcttctgacagcatctacgggtcttctctctacatga 36869473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 22349820 - 22349674
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||| |||||||| |||||  ||| |||||||||||| |||  ||||| ||| ||||| | |||||| |||||| ||||||| |||||||    
T  22349820 atttggatccaacttattgacctttaaatcctttttaatggtttctctaatagttttcctagttcttcctctacctcttttaacttgactctcctccatt 22349721  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| |   ||  |||||||||||||||||||||    
T  22349720 tgatctactcttcttaccatgacaattacgggtcttctctctacatg 22349674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 33073099 - 33073006
Alignment:
Q  70 ttttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| ||||||||| | |||||| |||||| |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||    
T  33073099 ttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctactcttcttaccacgacatctacgggtcttctctctacatg 33073006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 15682390 - 15682231
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||  ||  ||||| ||||| ||  |  ||||| ||| ||    
T  15682390 ttctatcataaatcatatttggatccaacttattgacctctaaatcctttctaatgatttctcttatagttttcctaggtttttctccacctcttttgac 15682291  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctac 160  Q
     ||||| | ||| |||| ||||||||||||||| || ||||||| || ||||||||||||    
T  15682290 ttgactttcctcaatttgatctactcttcttacgacggcatctatggatcttctctctac 15682231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 40979994 - 40980093
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||  ||  ||||| ||||||||| | |||||| ||||||    
T  40979994 ttctatcataaaccatatttggatccaactcattgacctctaaatcttttctaatagtttctcttatagttttcctaggtcttcctctacctcttttaac 40980093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 23404633 - 23404471
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | | |||||||||||| |||||||||| || |||||   || |||||||||||   || |||||| ||||||||| | |||||| ||| ||    
T  23404633 ttctatcatacaccatatttggatcaaactcattgatctataaattaattgtaatggtttcttttataattttcctaggtcttcttctacctcttttgac 23404534  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||||  ||  |||||||| ||||||  ||||||||    
T  23404533 ctgactctcctccatttgatctactcttcttatgacgacatctacgagtcttcaatctacatg 23404471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 38900157 - 38900074
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  38900157 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 38900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31681086 - 31681226
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||  |||||||||||||||||||||||||  |||||  ||||||||||||||||   | |||||| ||||||| | | |||||  |||||     
T  31681086 ttctatcataagccatatttggatccaactcattgacccttaaatcctttctaatggtttctc---taattttcctaggtctccctctacctgttttaaa 31681182  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatcta 144  Q
    ||||||||  ||||||| ||| ||||||||||| || |||||||    
T  31681183 ctgactctcttccatttgatcaactcttcttacgacggcatcta 31681226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 27648996 - 27648937
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggttt 60  Q
    |||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  27648996 ttctatcataaaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 27648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 21078117 - 21078071
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21078117 atttggatccaactcattgacctctaaatctttactaatggtttctc 21078071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 48919325 - 48919247
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtct 82  Q
    ||||| ||| |||||||||||| |||||||||||||||||||  ||||||||||||| || |||  ||||| |||||||    
T  48919325 tatcataaaccatatttggatcaaactcattgacctctaaatcatttctaatggtttttctaatagttttcctaggtct 48919247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 21517449 - 21517508
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||| ||||||||||||||||||||| ||| | ||||||||||||| |||| |||||||    
T  21517449 tatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctc 21517508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 9210773 - 9210853
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    ||||| ||| ||||||||||||||||||||| |||||||||| ||| ||||  |||||||  ||  ||||| |||||||||    
T  9210773 tatcataaaccatatttggatccaactcattaacctctaaatttttcctaaaagtttctcttatagttttcctaggtcttc 9210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 33139267 - 33139208
Alignment:
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||||||| |  | |||| |||||||||| |||||| |||||||||||||||||||    
T  33139267 actcttctccatctgttatacttttcttacaacggcatctgcgggtcttctctctacatg 33139208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 1011245 - 1011103
Alignment:
Q  19 ttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccattta 118  Q
    |||||||||| ||||| |||| ||||||||| |||||  ||||||  || |||||  ||||||||| | |||||| ||| | |||||||| ||  || |     
T  1011245 ttggatccaaatcattaacctttaaatatttcctaataatttctctcataatttttctaggtcttcctctacctcttttgatctgactctcctttatctg 1011146  T
Q  119 atctactcttcttacaaccgcatctacgggtcttctctctaca 161  Q
    ||||||||||| ||| ||  ||||||   ||||||||||||||    
T  1011145 atctactcttcgtactacaacatctagatgtcttctctctaca 1011103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 25579218 - 25579304
Alignment:
Q  76 taggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacat 162  Q
    |||||||||||||| ||| | | |  ||||| | |||||| ||||||||||||||||| || | ||||||  |||||||||||||||    
T  25579218 taggtcttcatttaactcttgtgatttgactatcctccatctaatctactcttcttaccacagaatctacatgtcttctctctacat 25579304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35922469 - 35922407
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||||||||||| ||| ||||||||| |||||||||| |||  |||| |||||||    
T  35922469 ttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagtttctc 35922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36239862 - 36239924
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| |||||||||||||||||| || | |||||||| ||| ||||| |||||||    
T  36239862 ttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctc 36239924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 45601692 - 45601630
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||||||||||| ||||||||||||| | ||||| || |||  ||||||||||||    
T  45601692 ttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctc 45601630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 46014359 - 46014409
Alignment:
Q  113 catttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| ||||||||||||||  || ||||||| ||||||||||||||||||    
T  46014359 catttgatctactcttcttaggacggcatctatgggtcttctctctacatg 46014409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34035220 - 34035265
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaata 46  Q
    ||||||||  || ||||||||||||||||||||||| |||||||||    
T  34035220 ttctatcatgaaccatatttggatccaactcattgatctctaaata 34035265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 18795893 - 18795841
Alignment:
Q  11 aatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||||||||| || ||||||||| |||||||||| ||||| ||| |||||||    
T  18795893 aatcatatttgaattcaactcattaacctctaaatcttttcgaatagtttctc 18795841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37976451 - 37976407
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||    
T  37976451 ttctatcataaaccatatttggatccaactcattaatctctaaat 37976407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 42969910 - 42969870
Alignment:
Q  5 atcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||| ||| ||||||||||||||||||||| ||||||||||    
T  42969910 atcataaaccatatttggatccaactcattaacctctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 27450253 - 27450407
Alignment:
Q  9 aaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactct 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||    
T  27450253 aaaatcatatttggatccaactcattgacctctaaatcttttccaatggtttctcgaatgattttcttaggtcttcctttacctcttttaacctgattct 27450352  T
Q  109 tctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  27450353 actccatttgatctactcttcttacaacggcatctacgggtcttctctctacatg 27450407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 32479254 - 32479092
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| || |||    
T  32479254 ttctatcaaaaaccatattttgatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctttcaac 32479155  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||| |||| |||||||| |||||||||||||||||| || ||||| ||||| |||||||||||    
T  32479154 ctgtctctcctccatttgatctactcttcttacaacggcctctacaggtctcctctctacatg 32479092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 48174175 - 48174321
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||| |||||| ||||||| |||||||    
T  48174175 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatt 48174274  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  48174275 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 48174321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 56375490 - 56375344
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||| |||  ||||||||||||||| | |||||| |||||| ||||||| |||||||    
T  56375490 atttggatccaactcattcacctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatt 56375391  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  56375390 ttatctactcttcttaccacggcatctacgggtcttctctctacatg 56375344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 4441053 - 4440911
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  4441053 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 4440954  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | ||||||||||||||| || ||||||||||||||||||||||    
T  4440953 tgatctactcttcttaccacagcatctacgggtcttctctcta 4440911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 27983409 - 27983247
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||| ||||  ||||||| ||||||| ||||||| |||||||| |||||||| ||||| ||||||| |||||||| |||||| | |||||| ||||||    
T  27983409 ttctataaaaatccatattttgatccaattcattgaactctaaatcttttctaaaggtttatcgaatggttttcttatgtcttcctctacctcttttaac 27983310  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||    
T  27983309 ctgactctcctccatttgatatactcttcttacaacggcatctacgagtcttctctctacatg 27983247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 31959896 - 31960042
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  31959896 atttggatccaactcattgacctctaaatcctttctaatagtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 31959995  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  31959996 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 31960042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 52569597 - 52569743
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||  |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  52569597 atttggatccaactcattgacctctaaatcctttctaatggtttctttaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatt 52569696  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  52569697 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 52569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 23906379 - 23906523
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||  |||||||||||||||||  |||||| ||||||| |||||||    
T  23906379 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagtttttctaggtcttcatttaccttttttaacttgactctcctccatt 23906478  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||||||||||| || ||||||||  ||||||||||||||||    
T  23906479 taatctactcttcttaccacggcatctac--gtcttctctctacatg 23906523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 1777099 - 1777241
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  1777099 atttggatccaactcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 1777198  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | ||||||||||||||| || ||||||| | ||||||||||||    
T  1777199 tgatctactcttcttaccacggcatctatgagtcttctctcta 1777241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 33190930 - 33191076
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| |||||||||||||||    
T  33190930 atttggattcaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactcttctccatt 33191029  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||||  || ||||||||||||||||||||||||||    
T  33191030 tgatctacccttcttaacacggcatctacgggtcttctctctacatg 33191076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 33227409 - 33227263
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  ||||||||||||| || |||  ||||| ||||||||||| |||||| |||||| |||||||  ||||||    
T  33227409 atttggatccaactcattgacctctaaatcctttctaatggtttttctaatagttttcctaggtcttcatctacctcttttaacttgactctcttccatt 33227310  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||  || ||||||||||||||||||||||||||    
T  33227309 tgatctactcttcttaacacggcatctacgggtcttctctctacatg 33227263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 436429 - 436283
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||| ||||||||||||||||||||  |||||| ||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  436429 atttggattcaactcattgacctctaaatcctttctagtggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 436330  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||| |||||||||||||||||    
T  436329 tgatctactcttcttaccacggcatctacaggtcttctctctacatg 436283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39708649 - 39708487
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||  ||  ||||| ||||||||| | |||||| ||| ||    
T  39708649 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgac 39708550  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | ||||||||||||||| || ||||||| | ||||||||| ||||||    
T  39708549 ctgactctcctccatctgatctactcttcttacgacggcatctatgtgtcttctctatacatg 39708487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 53707994 - 53707848
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| | ||||||| | |||||| |||||| ||||| | |||||||    
T  53707994 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctcggtcttcctctacctcttttaacttgactatcctccatt 53707895  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | || |||||||||||| || ||||||||||||||||||||||||||    
T  53707894 tgatatactcttcttaccacggcatctacgggtcttctctctacatg 53707848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 39100616 - 39100763
Alignment:
Q  15 atatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcca 114  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||||||||| |  ||||    
T  39100616 atatttggatccaactcattgacctccaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacctgactatcttcca 39100715  T
Q  115 tttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | | ||||||||||||||||| ||||||||||| |||||||||||||||    
T  39100716 tctgatctactcttcttacaa-cgcatctacggatcttctctctacatg 39100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 43434129 - 43433978
Alignment:
Q  12 atcatatttggatccaactcattgacctctaaat-attttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttc 110  Q
    |||| |||||||||| |||||||||||||||||| |||||| ||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |    
T  43434129 atcaaatttggatccgactcattgacctctaaatcattttc-aatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcc 43434031  T
Q  111 tccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||||||||    
T  43434030 tccatttgatttactcttcttaccacggcatctacgggtcttctctctacatg 43433978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20192249 - 20192087
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | |||| ||||||||||||| || ||||||||||||  |||||||||||||||| |||  |||| | ||||||||   |||||| ||||||    
T  20192249 ttctatcatacatcaaatttggatccaacccactgacctctaaatcctttctaatggtttctctaatagttttttcaggtcttccactacctcttttaac 20192150  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| || |||||||||||| || ||||||||||||||||||||||||||    
T  20192149 ttgactctcctccatttgatatactcttcttaccacagcatctacgggtcttctctctacatg 20192087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 48622625 - 48622771
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||| ||||||||||||||||||| |||||||||| |||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  48622625 atttggatcaaactcattgacctctaaatcttttctaatgatttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 48622724  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||| || ||||||| || |||| |||||||||||||||||||||    
T  48622725 tgatcttcttttcttaccacggcatttacgggtcttctctctacatg 48622771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 50287178 - 50287016
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | |||| |||| ||||||||||||||||||||||||  ||| ||||| || ||| |||  ||||| ||||||||| | |||||| ||||||    
T  50287178 ttctatcatacatcaaatttagatccaactcattgacctctaaatcctttataatgattactctaatagttttcataggtcttcttctacctcttttaac 50287079  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||  ||||||||||||||| || ||||||||||||||||||||||||||    
T  50287078 ttgactctcctccattcgatctactcttcttaccacggcatctacgggtcttctctctacatg 50287016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 26037571 - 26037729
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||| ||| ||||| |||||||  ||| ||||| ||||| ||| | | |||| ||||||    
T  26037571 ttctatcataaaccatatttggatccaactcattcacctctaaatctttcctaatagtttctcttatggttttcctaggttttcctctgcctcttttaac 26037670  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    |||||||| |||||| | ||||||||||||||| || |||| ||| |||||||||||||    
T  26037671 ctgactctcctccatctgatctactcttcttacgacggcatttacaggtcttctctcta 26037729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 47265261 - 47265407
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | |||| |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  47265261 ttctatcatagatcaaatttggatccaactcattgacctctaaattctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 47265360  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgg 147  Q
      || ||| ||||||||| |||||||||||||| || ||||||||||    
T  47265361 tagaatctcctccatttagtctactcttcttacgacggcatctacgg 47265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8286655 - 8286485
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcattta--------cct 92  Q
    |||||||| ||| || |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | ||        |||    
T  8286655 ttctatcataaaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttgtcct 8286556  T
Q  93 catttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | | |||| ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  8286555 cttctaacttgactctcctccatttcatctactcttcttacgacggcatctacgggtcttctctctacatg 8286485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 50679717 - 50679588
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| ||| || |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| | |||| ||    
T  50679717 tatcataaaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttg 50679618  T
Q  104 actcttctccatttaatctactcttcttac 133  Q
    ||||| ||||||||||||||||||||||||    
T  50679617 actctcctccatttaatctactcttcttac 50679588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21528504 - 21528421
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  21528504 ttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttc 21528421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 46582907 - 46583047
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||| |||||  |||| ||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  46582907 atttggatccaactcattgacctttaaatcctttccaatggtttctctaatagttttcataggtcttcctctacctcttttaacttgactctcctccatt 46583006  T
Q  117 taatctactcttcttacaaccgcatctac-gggtcttctct 156  Q
    | ||||||||||||||| ||  ||||||| |||||||||||    
T  46583007 tgatctactcttcttaccacgacatctacggggtcttctct 46583047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 37798067 - 37797906
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||| |||||||||||| |||||||  ||||||||| |||||| |||  ||||| ||| ||||| | ||  || ||||||    
T  37798067 ttctatcataaaccatatttggattcaactcattgacttctaaatcctttctaatgatttctctaatagttttcctagatcttcctctaa-tcttttaac 37797969  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||  ||||||| ||||||||||||||| || |||||||||  |||||||||||||||    
T  37797968 ctgactctcatccatttgatctactcttcttacgacggcatctacgaatcttctctctacatg 37797906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 21237058 - 21236951
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  21237058 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 21236959  T
Q  117 taatctac 124  Q
    | ||||||    
T  21236958 tgatctac 21236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20601718 - 20601874
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||||||||||| |||||||||||||||||      | ||||||||||||||||  ||  |||||  |||||||| | |||||| ||| ||    
T  20601718 ttctatcataaatcatatttgaatccaactcattgacctg-----actttctaatggtttctcttatagttttca-aggtcttcttctacctcttttgac 20601811  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | || ||||||||||||||| |||||||| |||||||||||||||||    
T  20601812 ctgactctcctccatcttatatactcttcttacaacggcatctacaggtcttctctctacatg 20601874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 20821074 - 20821235
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||||||||||| ||||||||||||||||| |||||  |||||||| |||||||  ||  ||||| ||||||||||| |||||| ||| |     
T  20821074 ttctatcataaatcatatttgaatccaactcattgacctttaaatcctttctaat-gtttctcttatagttttcctaggtcttcatctacctcttttgat 20821172  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||| ||| |||||| ||||||||| || |||  |  |||||||| |||||||||||||||||    
T  20821173 ctgattctgctccatctaatctacttttgttatgaaggcatctacaggtcttctctctacatg 20821235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 37773517 - 37773679
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || || ||||||||||||||||||||| ||||  |||||||||||||||| |||  ||||| ||||| ||||| |||||| |||||     
T  37773517 ttctatcataaaccaaatctggatccaactcattgacctccaaatcctttctaatggtttctctaatagttttcctaggtattcatctacctcttttaaa 37773616  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     |||||||  ||||||| ||||||||| ||||||||   || |||||||| ||| ||||||||    
T  37773617 ttgactctcatccatttgatctactctacttacaacgatatttacgggtcgtctatctacatg 37773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 51811344 - 51811449
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||| |||||||||| ||| |||  |||||||||| ||||||| ||||||||||||||||||||| ||| || |||||     
T  51811344 ttctatcaaaaaccatatttggatcaaactcattgagctcgaaactttttctaatgatttctcggatgattttcttaggtcttcatctacttcttttaat 51811443  T
Q  101 ctgact 106  Q
    ||||||    
T  51811444 ctgact 51811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 6957814 - 6957731
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||| | |||| |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  6957814 ttctatcatacatcaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 6957731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 7947153 - 7947070
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||  |||| ||||||||||| |||  |||||||||||||||    
T  7947153 ttctatcataaatcaaatttggatccaactgattgacctctaaatcctttcaaatggtttctctaatagttttcttaggtcttc 7947070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 16003139 - 16003080
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16003139 tatcataaatcatatttagatccaactcattgacctctaaattttttctaatggtttctc 16003080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 28236398 - 28236237
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || |||||||||||||||||||||||||||||  ||| ||| | |||||| |||  ||||| ||||||||| | ||||   ||||||    
T  28236398 ttctatcataaaccaaatttggatccaactcattgacctctaaatcatttataaagatttctctaatagttttcctaggtcttcctctacc-attttaac 28236300  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||| ||| | |||||| ||| ||||||||||| ||  |||||||  ||||||||||||||||    
T  28236299 ttgattctccgccatttgatcaactcttcttacgacgacatctacaagtcttctctctacatg 28236237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 1793677 - 1793624
Alignment:
Q  2 tctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaat 55  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1793677 tctatcataaatcatatttggatccaactcattgacctctaaatcttttctaat 1793624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 12494863 - 12494796
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  12494863 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 12494796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 20591384 - 20591528
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcc 113  Q
    |||||||| |||||||||||||||||||||||  ||||||||||  ||||  ||  ||||||||||||||| | ||||||     || ||||||| ||||    
T  20591384 catatttgaatccaactcattgacctctaaatcctttctaatggggtctcttatagttttcttaggtcttcctctacctc----tacttgactctcctcc 20591479  T
Q  114 atttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || | || |||||||||||| ||  |||||| | ||||||||||||||||    
T  20591480 atctgatatactcttcttac-acgacatctatgagtcttctctctacatg 20591528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28550521 - 28550583
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||||||| |||||||||||| |||||||| |||||||||| ||| ||||| |||||||    
T  28550521 ttctatcaaaaaccatatttggatcaaactcattaacctctaaatctttcctaatagtttctc 28550583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 50862844 - 50862799
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttct 62  Q
    |||||||||||||||||||||||||||||  |||||||||||||||    
T  50862844 atttggatccaactcattgacctctaaatcctttctaatggtttct 50862799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31043288 - 31043226
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||||||||||||||||||||| | |||||||| ||| ||||| |||||||    
T  31043288 ttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctc 31043226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19154929 - 19154974
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaata 46  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||    
T  19154929 ttctatcataaaccaaatttggatccaactcattgacctctaaata 19154974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 45204905 - 45205048
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||| ||| | |||||||| ||| ||||| |||||||  ||  ||||  ||||||||| |  ||||| ||| |     
T  45204905 ttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttcctccacctcttttgat 45205004  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctac 145  Q
    ||| |||| |||||| | ||||||||||| ||||||  |||||||    
T  45205005 ctg-ctctcctccatctgatctactcttcgtacaacatcatctac 45205048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 41009288 - 41009347
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||| ||| |||||||| ||||||||||||||| |||||||  |||||||| |||||||    
T  41009288 tatcataaaacatatttgaatccaactcattgacttctaaatcatttctaattgtttctc 41009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 51421946 - 51421884
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||| ||||||||||| ||||| |||||||||| ||| ||||| |||||||    
T  51421946 ttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctc 51421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 4548238 - 4548158
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtc 81  Q
    |||||||| ||| || |||| ||||||||| |||||||||||||   ||||||||| |||||| |||  ||||| ||||||    
T  4548238 ttctatcataaaccaaatttagatccaacttattgacctctaaaatatttctaatgatttctctaatagttttcgtaggtc 4548158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 28351761 - 28351617
Alignment:
Q  15 atatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcca 114  Q
    |||||||||||||||||| | | |||||||| |||  |||| |||||||  ||  ||||  ||||||||  | |||||| | ||| |||||| | |||||    
T  28351761 atatttggatccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctcca 28351662  T
Q  115 tttaatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | | ||||||||| ||||| || |  ||||| |||||||||||||    
T  28351661 tctgatctactctccttactacagagtctacaggtcttctctcta 28351617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41340616 - 41340660
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatatt 48  Q
    ||||| |||| |||||||||||||||||||| | |||||||||||    
T  41340616 tatcataaattatatttggatccaactcattaatctctaaatatt 41340660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 53518389 - 53518433
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| ||||||| ||||||||||||| ||||||||||    
T  53518389 ttctatcataaaccatatttagatccaactcattaacctctaaat 53518433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 7e-61; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 35033362 - 35033200
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  35033362 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 35033263  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| || ||||||||||||||  ||||||||||||||||||||||||||    
T  35033262 ctgactctcctccatttgatttactcttcttacaatggcatctacgggtcttctctctacatg 35033200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22288 - 22126
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||| |||||||| |||||| | |||||| ||||||    
T  22288 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatggttttcttaagtcttcctctacctcttttaac 22189  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22188 ccgactctcctccatttaatctactcttcttacaacggcatctacgggtcttctctctacatg 22126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 5169048 - 5168886
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||| |||| ||||||||||||||| | |||||| ||||||    
T  5169048 ttctatcaaaaaccatatttggatccaactcattgacctataaatcctttctaatggtttctctaatggttttcttaggtcttcctctacctcttttaac 5168949  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
      |||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  5168948 tagactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatg 5168886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25191593 - 25191431
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||| |||| || |||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| | |||||| ||||||    
T  25191593 ttctatcaaaaaccatattttgatctaattcattgacctctaaatcttttctaatggtttctcaaatgattttcttagttcttcctctacctcttttaac 25191494  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | | |||| |||||||| |||| ||||||||||||| | ||||||||||||||||||||||||    
T  25191493 cgggctctcctccatttgatcttctcttcttacaacggtatctacgggtcttctctctacatg 25191431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 47233662 - 47233824
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||| || |||||||||||||| |  |||||||||||||||| |||  ||||||||||||||| |  || || ||||||    
T  47233662 ttctatcaaaaaccatatttggatctaattcattgacctctaattcctttctaatggtttctctaatagttttcttaggtcttcttcaacatcttttaac 47233761  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  47233762 ctgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatg 47233824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 52139000 - 52138854
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  52139000 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 52138901  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||| ||||||||| || |||||||| |||||||||||||||||    
T  52138900 taatctattcttcttaccacggcatctacaggtcttctctctacatg 52138854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 54279220 - 54279077
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  54279220 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcttctacctcttttaacttgactctcctccatt 54279121  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctac 160  Q
    | |||||||||| |||| || |||||||||||||||||||||||    
T  54279120 tgatctactctttttaccacggcatctacgggtcttctctctac 54279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 28245637 - 28245491
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| |||  ||||| ||||||||||| |||||| |||||| ||||||| |||||||    
T  28245637 atttggatccaactcattgacctctaaatcatttctaatcgtttctctaatagttttcctaggtcttcatctacctcttttaacttgactctcctccatt 28245538  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | || |||||||||||| || |||||||||||| |||||||||||||    
T  28245537 tgatatactcttcttaccacggcatctacgggttttctctctacatg 28245491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 48508451 - 48508289
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||  ||||||||||||||||  ||  ||||| ||||||||| | |||||| ||| ||    
T  48508451 ttctatcataaaccatatttgaatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgac 48508352  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | ||||||||||||||| ||  |||||||||||||||||||||||||    
T  48508351 ctgactctcctccatctgatctactcttcttacgacaacatctacgggtcttctctctacatg 48508289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 51447799 - 51447938
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||||||||       || |||||| ||||||| |||||||    
T  51447799 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc-------tcttttaacttgactctcctccatt 51447891  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||||| |||||||||||||||    
T  51447892 tgatctactcttcttaccacggcatctacggatcttctctctacatg 51447938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 53519796 - 53519653
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| | |||||||||||||||||||||||||||||| |||| |||||||||            |||||||||||| | |||||| ||||||    
T  53519796 ttctatcaaaaaccttatttggatccaactcattgacctctaaatcttttttaatggttt------------tcttaggtcttcctctacctcttttaac 53519709  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctct 156  Q
     ||||||| |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  53519708 atgactctcctccatttgatctactcttcttacaacggcatctacggttcttctct 53519653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 163
Target Start/End: Original strand, 33272122 - 33272250
Alignment:
Q  34 tgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttac 133  Q
    ||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||| || ||| ||||||||    
T  33272122 tgacctctaaatcatttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatatacacttcttac 33272221  T
Q  134 aaccgcatctacgggtcttctctctacatg 163  Q
     || ||||||||  ||||||||||||||||    
T  33272222 cacggcatctac-agtcttctctctacatg 33272250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 38060578 - 38060485
Alignment:
Q  70 ttttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| ||||||| | | |||||  |||||||||||||| |||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  38060578 ttttcctaggtctccctctaccttttttaacctgactctcctccatttaatctactcttcttacgacggcatctacaggtcttctctctacatg 38060485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53262357 - 53262292
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaa 66  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  53262357 ttctatcaaaaaccatatttggatccaactcattgacctctaaatctcttctaatggtttctcgaa 53262292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38850337 - 38850174
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaata-ttttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaa 99  Q
    |||||||| ||| || ||||| || ||| |||||||| |||| ||  |||||||||||||| || ||| |||||| ||||||||| | |||||| | |||    
T  38850337 ttctatcataaaccaaatttgaattcaattcattgacttctagatccttttctaatggtttatctaataattttcctaggtcttcctctacctcttctaa 38850238  T
Q  100 cctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||| |||||||  ||||||||||||||| ||  | ||||| | |||||||||||||||    
T  38850237 cttgactctcctccattcgatctactcttcttacgacgacctctactgatcttctctctacatg 38850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 12096787 - 12096875
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgac 105  Q
    |||||||||||||||||||||||||||||  ||||||||||||| || |||  ||||| ||||||||| | |||||| |||||| ||||    
T  12096787 atttggatccaactcattgacctctaaatcctttctaatggtttttctaatagttttcctaggtcttcctctacctcttttaacttgac 12096875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 39235354 - 39235192
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||  ||| ||||||| ||||||||||||| || ||||||| ||| ||||| |||| ||  ||  |||| || ||||||| | |||||| ||| |     
T  39235354 ttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatcctatagtttttttgggtcttcctctacctcttttgat 39235255  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||| | |||||| | ||||||||||| ||| ||  ||||||| |||||||||||||||||    
T  39235254 ctgactttcctccatctgatctactcttcgtactacaacatctacaggtcttctctctacatg 39235192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 48953485 - 48953638
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacc--tctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcattta 98  Q
    |||||||| |||||||||||||||||||||||||||||  | ||| |  ||| ||||| ||||||  ||  ||||| ||||||||| | ||| || |||     
T  48953485 ttctatcataaatcatatttggatccaactcattgacctttataagttctttttaatgatttctcttatagttttcctaggtcttcctctacttcttttg 48953584  T
Q  99 acctgactcttctccatttaatctactcttcttacaaccgcatctacgggtctt 152  Q
    ||| |||||| |||||| | ||||||||||||||| ||  ||||| ||||||||    
T  48953585 acccgactctcctccatctgatctactcttcttacgacaacatctgcgggtctt 48953638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52156150 - 52156212
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  52156150 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatgatttctc 52156212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 19676160 - 19676308
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcc 113  Q
    ||||||||||||||||||||| |||||||||| ||| ||||| |||||||  |   ||||  |||||||||  ||||||| ||| | |||||||| |||     
T  19676160 catatttggatccaactcattaacctctaaatttttcctaatagtttctcttacagtttttctaggtcttc-cttacctcttttgatctgactctcctct 19676258  T
Q  114 atttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || | |||| |||||  ||| || |||||||| |||||||||||||||||    
T  19676259 atctgatcttctctttgtactacagcatctacaggtcttctctctacatg 19676308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38060930 - 38060868
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||   ||||||||||||||||    
T  38060930 ttctatcataaaccatatttggatccaactcattgacttctaaaacctttctaatggtttctc 38060868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 54425031 - 54425157
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||| | ||| |||||||||||||||| |||||||||||||||  ||| |||||||  |||  ||   |||||||||||||| | |||||| ||| ||    
T  54425031 ttctataataaaccatatttggatccaacccattgacctctaaatcctttttaatggtccctcttatagctttcttaggtcttcctctacctcttttgac 54425130  T
Q  101 ctgactcttctccatttaatctactct 127  Q
    |||| ||| |||||| | |||||||||    
T  54425131 ctgaatctcctccatctgatctactct 54425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 45289157 - 45289289
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||| | |||||||| ||| ||||| |||||||  ||  ||||| ||| ||||| | || ||| | |||     
T  45289157 ttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctcttgtaat 45289256  T
Q  101 ctgactcttctccatttaatctactcttcttac 133  Q
    || ||| | |||||| | |||||||||||||||    
T  45289257 ctaactatcctccatctgatctactcttcttac 45289289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 45728319 - 45728201
Alignment:
Q  48 tttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccattt--aatctactcttcttacaaccgcatctac 145  Q
    |||||||||||||||| |||  ||||| ||||||||| | || ||| |||||| ||||||| ||||||||   || |||||||||||||||  ||||||     
T  45728319 tttctaatggtttctctaatagttttcctaggtcttcctctatctcttttaacatgactctcctccatttgatatatactcttcttacaacgacatctat 45728220  T
Q  146 ggg-tcttctctctacatg 163  Q
    ||| | |||||||||||||    
T  45728219 gggtttttctctctacatg 45728201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49042153 - 49042090
Alignment:
Q  1 ttctatca-aaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||| ||| ||||| |||||||    
T  49042153 ttctatcataaaaccatatttggatccaactcattaacctctaaatctttcctaatagtttctc 49042090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15296123 - 15296061
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||| ||| ||||| |||||||    
T  15296123 ttctatccgaaatcatatttggatccaattcattaacctctaaatctttcctaatagtttctc 15296061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 54128595 - 54128533
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||| ||| || || |||||||    
T  54128595 ttctatcataaaccatatttgggtccaactcattgacctctaaatctttccttatagtttctc 54128533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 163
Target Start/End: Complemental strand, 3186971 - 3186822
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcc 113  Q
    |||||||||||| ||||||||||||| |||||  ||||||||| ||| ||  ||  ||||||||||| ||  |  ||||| ||| |||||||| |||||     
T  3186971 catatttggatctaactcattgacctttaaattctttctaatgatttttcttatagttttcttaggtatttctccacctcttttgacctgacttttctca 3186872  T
Q  114 atttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || | ||||| | |||||||||   |||||||   |||||||||||||||    
T  3186871 atctgatctatttttcttacaatgacatctacaaatcttctctctacatg 3186822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 161
Target Start/End: Original strand, 30294190 - 30294347
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| |||||||| || |||||||||||||||||| ||||| |||| |||| |||| ||  ||  || |  ||||||||| | |||||| ||| ||| |    
T  30294190 tatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatcttatagttcttctaggtcttcctctacctcttttgacccg 30294289  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctaca 161  Q
    ||||| ||  || |||| ||||||||||||    ||||||||  ||||||||||||||    
T  30294290 actctccttaatctaatttactcttcttacggtggcatctacaagtcttctctctaca 30294347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54422909 - 54422966
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggt 58  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  54422909 ttctataataaaccatatttggatccaactcattgacctctaaatcctttttaatggt 54422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 311375 - 311419
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||    
T  311375 ttctatcaaaaaccatatctggatccaactaattgacctctaaat 311419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44571643 - 44571595
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattt 49  Q
    |||||||| ||| ||||||||||||||||||||| | ||||||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaatattt 44571595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 19162666 - 19162785
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcc 113  Q
    |||| ||| |||||||||||| | |||||||| ||| ||||| |||||||  ||   |||| ||||||||| | || ||| ||| |||||||||| || |    
T  19162666 catacttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactcttttgacctgactctccttc 19162765  T
Q  114 atttaatctactcttcttac 133  Q
    || | |||||||||||||||    
T  19162766 atctgatctactcttcttac 19162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38431064 - 38431021
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaa 44  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||    
T  38431064 ttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17022756 - 17022800
Alignment:
Q  19 ttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    ||||||||||||||||||||||||| |  ||| ||||||||||||    
T  17022756 ttggatccaactcattgacctctaattcctttttaatggtttctc 17022800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 7e-61; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 696485 - 696323
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  696485 ttctatcaaaaaccatatttggatcaaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 696386  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| | |||||||||||||||||| ||||||||||||||||||||||||||    
T  696385 ctgactctcctccatatgatctactcttcttacaacggcatctacgggtcttctctctacatg 696323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4001521 - 4001683
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  4001521 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 4001620  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  4001621 ctgactctcctccatttgatctactcttcttacaacggcatctacgggtctcctctctacatg 4001683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8391988 - 8391826
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||    
T  8391988 ttctatcaaaaatcatatttggatccaacttattgacctctaaatcttttctaatgatttctcgaatggttttcttaggtcttcatatacctcctttaac 8391889  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| || ||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  8391888 atgactctccttcatttgatctactcttcttacaacggcatctacgggtctcctctctacatg 8391826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 25979297 - 25979459
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| | ||||||| | |||||| ||||||    
T  25979297 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcatgggtcttcctctacctcttttaac 25979396  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||  ||||||||| |||||||| ||||||||||||||||||||||||||    
T  25979397 ctgactctcctccattcgatctactctccttacaacagcatctacgggtcttctctctacatg 25979459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 1210945 - 1210799
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  1210945 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 1210846  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  1210845 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 1210799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 34792415 - 34792577
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || ||||||||||||||||||||||| |||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  34792415 ttctatcataaaccaaatttggatccaactcattgacctttaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 34792514  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  34792515 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatg 34792577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37311821 - 37311955
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||||||| | | |||||| ||||||    
T  37311821 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcaaatggttttcctaggtctacctctacctcttttaac 37311920  T
Q  101 ctgactcttctccatttaatctactcttcttacaa 135  Q
    |||||||| |||||||| |||||||||||||||||    
T  37311921 ctgactctcctccatttgatctactcttcttacaa 37311955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 30202212 - 30202359
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| |||||||  ||||||    
T  30202212 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcgtccatt 30202311  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatga 164  Q
    | ||||||||||||||| || |||||||||||||||||||||||||||    
T  30202312 tgatctactcttcttaccacggcatctacgggtcttctctctacatga 30202359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 49347475 - 49347622
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  49347475 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 49347574  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatga 164  Q
    | ||||||||||||||| || ||||||||||||||||||||| |||||    
T  49347575 tgatctactcttcttaccacggcatctacgggtcttctctctgcatga 49347622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 8672118 - 8671972
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  8672118 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 8672019  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||||| |||||||||||||||    
T  8672018 tgatctactcttcttaccacggcatctacggatcttctctctacatg 8671972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 4029322 - 4029176
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  4029322 atttggatccaactcattgacctttaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 4029223  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||| ||||||||| || ||||||||||||||||||||||||||    
T  4029222 tgatctattcttcttaccacggcatctacgggtcttctctctacatg 4029176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 22090296 - 22090150
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||| | |||||| ||||||| |||||||    
T  22090296 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctaccccttttaacttgactctcctccatt 22090197  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||| ||||||| || |||||||||||||||||| |||||||    
T  22090196 tgatctacttttcttaccacggcatctacgggtcttctccctacatg 22090150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 51440847 - 51440993
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  51440847 atttggatccaactcattgacctataaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcctttaacttgactctcctccatt 51440946  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |  |||||||||||||| || |||||| |||||||||||||||||||    
T  51440947 tgctctactcttcttaccacggcatctccgggtcttctctctacatg 51440993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 51602256 - 51602110
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||   |||||||||||| || |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  51602256 atttggatccaactcattgacctctaaatcccttctaatggtttttctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 51602157  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||||||||||||||||||||||    
T  51602156 tgatctactcttcttaccacgacatctacgggtcttctctctacatg 51602110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 15086138 - 15085988
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||            |||||||||||| | |||||| |||||     
T  15086138 ttctatcaaaaatcatatttggatccaactcattgacctctaaatcctatctaatggttt------------tcttaggtcttcctctacctcttttaat 15086051  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  15086050 ctgactctcctccatttgatctactcttctaacaacggcatctacgggtcttctctctacatg 15085988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32082823 - 32082973
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||            |||||||||||| | |||||| ||||||    
T  32082823 ttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggttt------------tcttaggtcttcctctacctcttttaac 32082910  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||| ||||    
T  32082911 ctgactctcctccatttgatctactcttcttacaacggcatctacgggtctcctctctgcatg 32082973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 32231037 - 32231182
Alignment:
Q  18 tttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccattt 117  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| ||||||||    
T  32231037 tttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccattt 32231136  T
Q  118 aatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||||||||||  || ||||||||  ||||||||||||||||    
T  32231137 gatctactcttcttatgacggcatctacaagtcttctctctacatg 32231182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 9592924 - 9592788
Alignment:
Q  27 aactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactc 126  Q
    |||||||||||||||||||  |||||||||||||||| |||   |||| ||||||||| | |||||| |||||| ||||||| |||||||| ||||||||    
T  9592924 aactcattgacctctaaatcatttctaatggtttctctaataggtttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactc 9592825  T
Q  127 ttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||| || ||||||||||||||||||||||||||    
T  9592824 ttcttaccacggcatctacgggtcttctctctacatg 9592788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 43240461 - 43240607
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||| | |||||  |||||||||||||||| |||  ||||| ||||||||| | |||||  |||||| | ||||| |||||||    
T  43240461 atttggatccaactcattgacatataaatcatttctaatggtttctctaatagttttcctaggtcttcctctaccttttttaacttaactctcctccatt 43240560  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||||||||||||||||||||||    
T  43240561 tgatctactcttcttaccacaacatctacgggtcttctctctacatg 43240607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39318345 - 39318193
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||  ||  ||||| ||||||||| | |||||| ||| ||    
T  39318345 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgac 39318246  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttct 154  Q
    | |||||| |||||| | |||| |||||||||| | ||||||||||||||||||    
T  39318245 ccgactctcctccatctgatctgctcttcttacga-cgcatctacgggtcttct 39318193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38807737 - 38807899
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||  ||||||||||||||||  ||  |||||||||||||||   || ||| ||| |     
T  38807737 ttctatcataaaccatatttggatccaactcgttgacctctaaatcctttctaatggtttctcttatagttttcttaggtcttcccctagctcttttgat 38807836  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||| |  |||||||||||||| || ||||||| ||||||||||| ||||||    
T  38807837 ctgactctcctccatctggtctactcttcttacgacggcatctaagggtcttctctttacatg 38807899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4415565 - 4415457
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacc-tcatttaa 99  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||| | |||| |  |||||    
T  4415565 ttctataaaaaatcatatttagatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggttttcctctacctttttttaa 4415466  T
Q  100 cctgactct 108  Q
    |||||||||    
T  4415465 cctgactct 4415457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 52921296 - 52921195
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  52921296 ttctatcataaaccatatttggatccaattcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 52921197  T
Q  101 ct 102  Q
    ||    
T  52921196 ct 52921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 18469162 - 18469302
Alignment:
Q  15 atatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcca 114  Q
    ||||||| ||||||||||||||||||| ||||||| ||||  |||||||  || |||||  || |||||||| |||||| ||| | | ||||||||||||    
T  18469162 atatttgtatccaactcattgacctcttaatatttcctaaaagtttctcttataatttttctaagtcttcatctacctcttttgatccgactcttctcca 18469261  T
Q  115 tttaatctactcttcttacaaccgcatctacgggtcttctc 155  Q
    | | || |||||||| ||| ||  |||||||  ||||||||    
T  18469262 tctgatttactcttcgtactacaacatctaccagtcttctc 18469302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 46423283 - 46423331
Alignment:
Q  5 atcaaaaatcatatttggatccaactcattgacctctaaatattttcta 53  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  46423283 atcaaaaaccatatttggatccaactcattgacctctaaatcttttcta 46423331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27520273 - 27520335
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| |||||||||||||||||| |||||| | |||||||| ||||||||| |||||||    
T  27520273 ttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctc 27520335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32079241 - 32079303
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| || |||||||||||||||||||||||||||||  ||||| ||||||||||    
T  32079241 ttctatcataaaccagatttggatccaactcattgacctctaaatcctttctgatggtttctc 32079303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 34827179 - 34827332
Alignment:
Q  11 aatcatatttggatccaactcatt-gacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactctt 109  Q
    |||||||||||||| ||||| |||  |||||||||| ||||||||| |||||||  ||  ||||  ||||||||| ||||  |  | |||||| |||||     
T  34827179 aatcatatttggattcaactgattaaacctctaaatcttttctaatagtttctcttatagtttttctaggtcttcctttattttttctaaccttactctc 34827278  T
Q  110 ctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||| ||||||||| ||||||| |  |||||||  |||||||||| ||||||    
T  34827279 ctccatctaatctacttttcttactagagcatctatcggtcttctctttacatg 34827332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 52561668 - 52561817
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctcc 113  Q
    ||||||||||||||||||||| |||||||||| ||| ||||  |||||||  ||  ||||  || |||||| | |||||| | ||| || ||||| ||||    
T  52561668 catatttggatccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctcttctaatctaactctcctcc 52561767  T
Q  114 atttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || | ||||||||||| |||  |  ||||||  |||||||||||||||||    
T  52561768 atctgatctactcttcgtactgcaacatctatcggtcttctctctacatg 52561817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24020333 - 24020377
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| |||||| |||||||||||||||||||||||||||||    
T  24020333 ttctatcataaatcaaatttggatccaactcattgacctctaaat 24020377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10200372 - 10200426
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaat 55  Q
    |||||||| ||| |||||||||||||||||||| || |||||||| |||||||||    
T  10200372 ttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaat 10200426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 36623963 - 36624012
Alignment:
Q  14 catatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||||||||||||||||  ||||||||| ||||||||| |||||||    
T  36623963 catatttggatccaactcattagcctctaaatcttttctaatagtttctc 36624012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9599460 - 9599587
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||| |||||| |||||||| | |||||||||||| ||||| |||||||   |  ||||  ||||||||| | |||||| | | |     
T  9599460 ttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttcctctacctcttatgat 9599559  T
Q  101 ctgactcttctccatttaatctactctt 128  Q
    |||||||| |||||| | ||||||||||    
T  9599560 ctgactctcctccatctgatctactctt 9599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7762503 - 7762565
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||| | ||| ||||||| ||||||||||||| || ||||||| ||||||||| |||||||    
T  7762503 ttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctc 7762565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29128999 - 29128937
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| |||||||||||||||||  || |||||||||| ||| ||||| |||||||    
T  29128999 ttctatcataaaccatatttggatccaacttgttaacctctaaatctttcctaatagtttctc 29128937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39140731 - 39140669
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||  ||| ||||||||||||||||| ||| |||||||||| ||| ||||| |||||||    
T  39140731 ttctatctgaaaccatatttggatccaactaattaacctctaaatttttcctaatagtttctc 39140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4707286 - 4707330
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| || |||||||||||||||||| ||||||||||    
T  4707286 ttctatcataaaccaaatttggatccaactcattaacctctaaat 4707330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38430100 - 38429938
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||| || ||||||    
T  38430100 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacttcttttaac 38430001  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| |||||||||||||||||| |||| |||||||||||||| ||||||    
T  38430000 ctgactctcctccatttgatctactcttcttacaacggcatatacgggtcttctctttacatg 38429938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 39029797 - 39029638
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||| ||    
T  39029797 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatgtttttcttaggtcttcctctacctctttttac 39029698  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctac 160  Q
    |||||| | ||||| || |||||||||||||||||| |||||||||||||| ||||||||    
T  39029697 ctgactttcctccaattgatctactcttcttacaacggcatctacgggtctcctctctac 39029638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 11992174 - 11992332
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||| | |||| ||||||||||||||| |||||||| ||||||    
T  11992174 ttctatcaaaaatcatatttggatctaactcattgacctctaaatcctttctaatgatttccctaatggttttcttaggtcttcctttacctcttttaac 11992273  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | |||||| |||||||| ||| |||||||| ||||| ||||||||||||||||||||||    
T  11992274 ccgactctcctccatttgatccactcttctaacaacggcatctacgggtcttctctcta 11992332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41763109 - 41763270
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| | |||||  ||||||    
T  41763109 ttctatcaaaaaacatatttggatccaactaattgacct-taaattttttctaatggtttctcgaatggttttcttaggtcttcctctaccttttttaac 41763207  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||| |||||||||| |||||||| |||||||||||| ||||    
T  41763208 ctgactctcctccatttgatctacttttcttacaacggcatctacaggtcttctctctgcatg 41763270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41197293 - 41197456
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacc-tcatttaa 99  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||| |||| |||||||||||| |||| ||||||||||||||  | |||| |  |||||    
T  41197293 ttctatcaaaaaccatattgggatccaactcgttgacctctaaatcttttataatggtttctcaaatggttttcttaggtctttctctacctttttttaa 41197392  T
Q  100 cctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  41197393 cctgactctcctccatttgatctactcttcttacaacggcatctacggatcttctctctacatg 41197456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36183667 - 36183505
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | |||| ||||||||||||||||||||| |||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  36183667 ttctatcatacatcaaatttggatccaactcattgacttctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 36183568  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  36183567 ttgactctcctccattttatctactcttcttaccacggcatctacgggtcttctctctacatg 36183505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 45367691 - 45367853
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||| |||| |||||||  |||||| | |||||| ||||||    
T  45367691 ttctatcaaaaatcatatttggatccaactcatttacctctaaatcctttctaatgatttctctaatggttttcttgagtcttcctctacctcttttaac 45367790  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
      |||||| |||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||    
T  45367791 tagactctcctccatttgatctacccttctaacaacggcatctacgggtcttctctctacatg 45367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12734916 - 12734753
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacc-tcatttaa 99  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||| | | |||| || |||||    
T  12734916 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtctccctctaccctcttttaa 12734817  T
Q  100 cctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||| ||||||    
T  12734816 cctgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctttacatg 12734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 4807795 - 4807653
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||  ||||| ||||||||||| |||||| |||||| ||||||| || ||||    
T  4807795 atttggatccaactcattgacctctaaatactttctaatggtttctctaatagttttcctaggtcttcatctacctcttttaacttgactctccttcatt 4807696  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | ||||||||||||||| ||  |||||||| ||||||||||||    
T  4807695 tgatctactcttcttaccacgacatctacgagtcttctctcta 4807653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 3243737 - 3243880
Alignment:
Q  19 ttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccattta 118  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | | |||| |||||| ||||||| ||||||||     
T  3243737 ttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctgcctcttttaacttgactctcctccatttg 3243836  T
Q  119 atctactcttcttacaaccgcatctacgggtcttctctctacat 162  Q
    ||||| ||||||||| || |||||||||||||||||||||||||    
T  3243837 atctattcttcttaccacggcatctacgggtcttctctctacat 3243880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 25834894 - 25834735
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||  || | ||||| ||||||||| | |||||| ||||||    
T  25834894 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctttaaag-ttttcctaggtcttcctctacctcttttaac 25834796  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || ||||  |||||||| |||||||||||||||||| ||||| || |||||||||||||||||    
T  25834795 ctaactc--ctccatttgatctactcttcttacaacggcatccacaggtcttctctctacatg 25834735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 451730 - 451876
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||  |||||| ||||||| |||||||    
T  451730 atttggatccaactcactgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctaccttttttaacttgactctcctccatt 451829  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||| ||||||||||    
T  451830 tgatctactcttcttaccacggcatctacgggtcttttctctacatg 451876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 2610788 - 2610642
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| |||||||  ||||||    
T  2610788 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcataggtcttcctctacctcttttaacttgactctcatccatt 2610689  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||||| ||||||||||||||||    
T  2610688 tgatctactcttcttaccacgacatctacgtgtcttctctctacatg 2610642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 7326242 - 7326388
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| || |||||| | |||||| |||||| ||||||| || ||||    
T  7326242 atttggatccaactcattgacctctaaatcatttctaatggtttctctaatagttttcctatgtcttcctctacctcttttaacttgactctccttcatt 7326341  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||| |||||||||||||||||    
T  7326342 tgatctactcttcttaccacggcatctacaggtcttctctctacatg 7326388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 38452768 - 38452913
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||| | |||||||    
T  38452768 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactttcctccatt 38452867  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||| ||||||||| || ||||||||||||||||||||||||||    
T  38452868 tgatcta-tcttcttaccacggcatctacgggtcttctctctacatg 38452913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 3866272 - 3866126
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||| ||| | |||||| |||||  || |||| |||||||    
T  3866272 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggttttcctctacctcttttaatttgtctctcctccatt 3866173  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||  |||||||||||||||||||||||||    
T  3866172 tgatctactcttcttaccacgacatctacgggtcttctctctacatg 3866126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 23997815 - 23997668
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||            |||||||||||| |  ||||| |||||||||    
T  23997815 tatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt------------tcttaggtcttcttccacctcttttaacctg 23997728  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| |||||||| ||||||||||||||||||  |||||||||||||||| ||||||||    
T  23997727 actctcctccatttgatctactcttcttacaacgacatctacgggtcttctttctacatg 23997668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 24583719 - 24583860
Alignment:
Q  22 gatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatc 121  Q
    ||||||||||||||||||||||||  |||||||||||||||| | |  |||| ||  |||||||| || ||| |||||| ||||||| |||||||| |||    
T  24583719 gatccaactcattgacctctaaatcctttctaatggtttctctattagtttttttttgtcttcatctatctcttttaacttgactctcctccatttgatc 24583818  T
Q  122 tactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  24583819 tactcttcttacgacagcatctacgggtcttctctctacatg 24583860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 8180980 - 8180834
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  ||||||||||||| || |||  ||||| || |||||| | |||| | |||||| ||||||| |||||||    
T  8180980 atttggatccaactcattgacctctaaatcctttctaatggtttatctaatagttttcctatgtcttcctctaccgcttttaacttgactctcctccatt 8180881  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||| || |||||||||||||||||    
T  8180880 tgatctactcttcttaccacggcatccacaggtcttctctctacatg 8180834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 28508894 - 28508749
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| || |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | ||| || ||||||    
T  28508894 ttctatcataaaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacatcttttaac 28508795  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacg 146  Q
     ||||||| |||||||| |||||||||| |||| || |||||||||    
T  28508794 ttgactctcctccatttgatctactcttattaccacggcatctacg 28508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 18424443 - 18424605
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||| ||||| |||| ||||| ||||||||  ||| |||||||||||| |||  ||||| || |||||| | |||||| ||||||    
T  18424443 ttctatcataaaccatattcggatcaaacttattgatctctaaatcctttataatggtttctctaatagttttcctatgtcttcctctacctcttttaac 18424542  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||  |||| || ||||| |||||||||  | ||||||||||||| ||||||||||||    
T  18424543 ctgactctcatccaattgatctaatcttcttacgtcggcatctacgggtcgtctctctacatg 18424605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31959737 - 31959625
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||  ||  ||||| |||||||||   || ||| ||| ||    
T  31959737 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcgcctaactcttttgac 31959638  T
Q  101 ctgactcttctcc 113  Q
    |||||||| ||||    
T  31959637 ctgactctcctcc 31959625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 35643148 - 35643065
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||  | |||||| ||||||    
T  35643148 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtctttctctacctcttttaac 35643065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30743745 - 30743686
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggttt 60  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||  |||||||||||||    
T  30743745 ttctattataaatcatatttggattcaactcattgacctctaaatcatttctaatggttt 30743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 6237819 - 6237981
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||  ||||||| |||||||| ||||||||||||||  ||||||||||||| ||   |  ||||  ||||||||  | |||||| ||| ||    
T  6237819 ttctatcataaactatatttgaatccaactgattgacctctaaatcatttctaatggtttatcttctagtttttctaggtcttactctacctcttttgac 6237918  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     || |||| |||||| | ||||||||||||||| ||  | | ||||||||| |||||||||||    
T  6237919 atgtctctcctccatctgatctactcttcttacgacgacgtttacgggtctactctctacatg 6237981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 9996696 - 9996754
Alignment:
Q  5 atcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||| ||| |||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  9996696 atcataaaccatatttggatccaactcgttgacctctaaatcctttctaatggtttctc 9996754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12882111 - 12882173
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||| ||| | |||||||    
T  12882111 ttctatcacaaaccatatttggatccaactcattaacctctaaatatttcctagtagtttctc 12882173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30306248 - 30306190
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtt 59  Q
    |||||||| ||| || |||||||||||||||| ||||||||||||  ||||||||||||    
T  30306248 ttctatcataaaccaaatttggatccaactcaatgacctctaaatcctttctaatggtt 30306190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45543139 - 45543200
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| |||||||||||| |||||||| |||||||||| ||||||||| |||||||    
T  45543139 ttctatcataaaccatatttggatcgaactcatt-acctctaaatcttttctaatagtttctc 45543200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3635389 - 3635425
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgac 37  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3635389 ttctatcaaaaaccatatttggatccaactcattgac 3635425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9496082 - 9496038
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaat 45  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||    
T  9496082 ttctatcataaaccatatttggatccaactcattaacctctaaat 9496038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41545621 - 41545559
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| |||||||| || |||||||| |||||||| || |||| ||||||||||||    
T  41545621 ttctatcataaaccatatttgaattcaactcatggacctctacatcttttataatggtttctc 41545559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 45
Target Start/End: Complemental strand, 227389 - 227361
Alignment:
Q  17 atttggatccaactcattgacctctaaat 45  Q
    |||||||||||||||||||||||||||||    
T  227389 atttggatccaactcattgacctctaaat 227361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35043507 - 35043669
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||| |||| ||||||||||||||||| ||| || ||||||    
T  35043507 ttctatcaaaaaccatatttggatccaacacattgacctctaaatcctttctaatggtttctctaatggttttcttaggtcttcatctacttcttttaac 35043606  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||||||  ||||||| ||||||| |||||||||| |||||||||||| |||||||||||||    
T  35043607 ctgactctcgtccatttgatctacttttcttacaacggcatctacgggtattctctctacatg 35043669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 5632035 - 5631876
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |||  ||| ||||| |||    
T  5632035 tatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaagtcttcctttgtctcttttaatctg 5631936  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| |||||||| ||||||| ||||||| |  ||||||||||||||||||||||||||    
T  5631935 actctcctccatttgatctactattcttacgaaggcatctacgggtcttctctctacatg 5631876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 21351903 - 21352065
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | || ||||||||||||||| | |||||| ||||||    
T  21351903 ttctatcaaaaatcatatttggatccagctcattgacctctaaatcttttctaatggtttctctattggttttcttaggtcttcctctacctcttttaac 21352002  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||||||||||||  |||| |||||| ||||  ||||| || |||||||||||||||||    
T  21352003 ctgactcttctccatttgttctattcttctaacaatggcatcgacaggtcttctctctacatg 21352065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 163
Target Start/End: Original strand, 5258218 - 5258376
Alignment:
Q  5 atcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctga 104  Q
    |||||||| |||||||||||| | ||||||||||||||||| || ||||||| ||||||||||| ||||||||||||||  | |||||| |||||| |||    
T  5258218 atcaaaaaccatatttggatctagctcattgacctctaaatcttgtctaatgatttctcgaatggttttcttaggtctttctctacctcttttaacatga 5258317  T
Q  105 ctcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  5258318 ctctcctccatttgatctactcttcttacaacggaatctacgggtcttctctctacatg 5258376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 608377 - 608211
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttc----ttaggtcttcatttacctcatt 96  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||  |||||    ||||||||||||  ||||| ||    
T  608377 ttctatcaaaaaccatatttggatccaactcattgaactctaaatcttttctaatggtttctcgaatagttttcttaattaggtcttcatcaacctcttt 608278  T
Q  97 taacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||| |||||||| |||||||| ||| |||||||||||||  |||||||| |||||||||||||||||    
T  608277 taatctgactctcctccatttgatccactcttcttacaaaggcatctacaggtcttctctctacatg 608211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 30031472 - 30031310
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||  |||||||||||||||||||||||  |||||||| ||||||| |||  ||||| ||||||| | | |||||| ||||||    
T  30031472 ttctatcataaaccatatttaaatccaactcattgacctctaaatcctttctaattgtttctctaatagttttcctaggtctccctctacctcttttaac 30031373  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||||| || ||||||| ||||||||||||||||||    
T  30031372 ctgactctcctccatttgatctactcttcttacgacggcatctatgggtcttctctctacatg 30031310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 20427703 - 20427862
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||  ||||||||||||||| |  ||||| | ||||    
T  20427703 ttctattaaaaaccatatttggatccaactcattaacctctaaat-ttttctaatggtttctctaatagttttcttaggtcttcctcaacctcttgtaac 20427801  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctaca 161  Q
    |||||||  ||| |||| || ||||||||||||||| ||||||||||||||||||| ||||    
T  20427802 ctgactcccctctatttgatttactcttcttacaacggcatctacgggtcttctctataca 20427862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 28085576 - 28085430
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  28085576 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctactccatt 28085477  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| ||   || |||||||||||||||||||||    
T  28085476 tgatctactcttcttaccactttatttacgggtcttctctctacatg 28085430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9706986 - 9706826
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||  || |||| ||||| || |||| ||| |||||  ||||   |||||| ||||||    
T  9706986 ttctatcaaaaaccatatttggatccaactcattaacctctaaatccttcctaacggtttatctaatggtttacttagcccttcccgtacctcttttaac 9706887  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctaca 161  Q
    ||||||||||||||||| |||||||||||| ||||| || |||| ||||||||||||||||    
T  9706886 ctgactcttctccatttgatctactcttctaacaacggcttctatgggtcttctctctaca 9706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 32756121 - 32755974
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||  ||||| ||||||||  | |||||| |||||| ||||||| |||||||    
T  32756121 atttggatccaactcattgacctctaaatcttttctaatggtttctctaatagttttcctaggtctttctctacctcttttaacttgactctcctccatt 32756022  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatga 164  Q
    | ||||||||||||||  ||  ||||| ||||||||| ||||||||||    
T  32756021 tgatctactcttcttattacgacatcttcgggtcttccctctacatga 32755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 5081056 - 5080905
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| |||||||||||| |||||||||||||||||||||||| |||  |||| |||||| |||  ||||| ||||||||||| || ||| ||||||    
T  5081056 ttctatcataaatcatatttgtatccaactcattgacctctaaataattttgaatgatttctctaatagttttcctaggtcttcatctatctcttttaac 5080957  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtctt 152  Q
      |||||| |||||||| || |||||||||||| || |||||||||||||||    
T  5080956 gagactctcctccatttgatttactcttcttacgacagcatctacgggtctt 5080905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 12890791 - 12890643
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||||||| ||||||||||| |||||||  ||||||||||||||||  ||  ||||| ||||||||||| |||||| ||| ||    
T  12890791 ttctatcataaaccatatttggatctaactcattgacgtctaaatcctttctaatggtttctcttatagttttcctaggtcttcatctacctcttttgac 12890692  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggt 149  Q
    || ||||| |||||| | ||||||||||||||| || ||||||| ||||    
T  12890691 cttactctcctccatctgatctactcttcttacgacggcatctatgggt 12890643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 7133915 - 7133800
Alignment:
Q  48 tttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgg 147  Q
    |||||||||||||||| |||  ||||  ||||||||| | |||||| |||||| ||||||| |||||||| ||||||||||||||| || |||||| |||    
T  7133915 tttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatcttcgg 7133816  T
Q  148 gtcttctctctacatg 163  Q
    ||||||||||||||||    
T  7133815 gtcttctctctacatg 7133800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 7136838 - 7136723
Alignment:
Q  48 tttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgg 147  Q
    |||||||||||||||| |||  ||||  ||||||||| | |||||| |||||| ||||||| |||||||| ||||||||||||||| || |||||| |||    
T  7136838 tttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggcatcttcgg 7136739  T
Q  148 gtcttctctctacatg 163  Q
    ||||||||||||||||    
T  7136738 gtcttctctctacatg 7136723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 10099994 - 10100087
Alignment:
Q  70 ttttcttaggtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| ||||||||| | |||||| ||||| |||||||| || ||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  10099994 ttttcctaggtcttcctctacctcttttaaactgactctccttcatttgatctactcttcttacaacggcatctacgagtcttctctctacatg 10100087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14031011 - 14030861
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||            |||| ||||||||||||||| | |||||| |||||     
T  14031011 ttctatcaaaaatcatatttggatctaacccattgacctctaaatcttttct------------aatgtttttcttaggtcttcctctacctcttttaat 14030924  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| | | |||| |||||||||||||||||| |||| |||  ||||||||| ||||||    
T  14030923 ccgactctccactatttgatctactcttcttacaacggcatttacatgtcttctctatacatg 14030861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 33497172 - 33497016
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| |||||||||||||||||||||||||||||| |||||  ||||||| |||||||| |||  ||||  ||| ||| | | |||||| |||||| ||    
T  33497172 tatcataaatcatatttggatccaactcattgacctttaaatcctttctaaaggtttctctaatagtttttctagatctccctctacctcttttaacttg 33497073  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||  || ||||| |||| |||||||||| || || | ||| |||||||||||||||||    
T  33497072 actc--cttcatttgatcttctcttcttacgacagcgtttac-ggtcttctctctacatg 33497016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 9593774 - 9593934
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||| |||||||||||||| | |||||| | ||| ||||| |||||||  || |||||  ||||||||| | ||||||  || |     
T  9593774 ttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctc--ttgat 9593871  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||| | ||||||||||||||| || ||||||||  ||||||||||||||||    
T  9593872 ttgactctcctccatctgatctactcttcttactacagcatctacatgtcttctctctacatg 9593934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3206525 - 3206578
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaa 54  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  3206525 ttctattaaaaaccatatttggatccaactcattgacctctaaatcttttctaa 3206578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 34143847 - 34143923
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctc 93  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| |||  ||||| ||||||||| | ||||||    
T  34143847 atttggatccaactcattgacctctaaatcctttgtaatggtttctctaatagttttcctaggtcttcctctacctc 34143923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 34156463 - 34156539
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctc 93  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| |||  ||||| ||||||||| | ||||||    
T  34156463 atttggatccaactcattgacctctaaatcctttgtaatggtttctctaatagttttcctaggtcttcctctacctc 34156539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 163
Target Start/End: Original strand, 28026896 - 28027055
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctg 103  Q
    ||||| ||| |||||||| || ||| ||||| |||| ||||| |||  ||||||||| ||  ||  |||| |||||||||| | |||||| | ||| |||    
T  28026896 tatcataaaccatatttgaatacaaatcattaacctgtaaatctttcataatggtttttcttatagtttttttaggtcttcctctacctcttctaatctg 28026995  T
Q  104 actcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    ||||| |||||| | || |||||||| ||| ||||||||||| ||| || ||||||||||    
T  28026996 actctcctccatctgatatactcttcgtactaccgcatctacaggtgttatctctacatg 28027055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24666027 - 24665965
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||| ||||||| ||||||||||||||||||||||||||||  |||| |||||||    
T  24666027 ttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctc 24665965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 30679544 - 30679460
Alignment:
Q  79 gtcttcatttacctcatttaacctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||| | |||||| | |||| ||||||| |||||||| ||||||| ||||||| ||  ||||||||||||| |||||||||||    
T  30679544 gtcttcctatacctcttataacttgactctactccatttgatctactattcttacgacgacatctacgggtctcctctctacatg 30679460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10098960 - 10099022
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| | | |||||||  ||||||||||||||||||||||| |||| ||||||||||||    
T  10098960 ttctatcatacaccatatttaaatccaactcattgacctctaaatcttttttaatggtttctc 10099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 45
Target Start/End: Original strand, 34934912 - 34934940
Alignment:
Q  17 atttggatccaactcattgacctctaaat 45  Q
    |||||||||||||||||||||||||||||    
T  34934912 atttggatccaactcattgacctctaaat 34934940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 3302060 - 3301898
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| |||| ||||||||||||||| | |||||| ||||||    
T  3302060 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttataatggtttctctaatggttttcttaggtcttcctctacctcttttaac 3301961  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||  | |||||| ||||| ||||||||||||||||||||||||||    
T  3301960 ctgactctcctccatttgattcattcttctaacaacggcatctacgggtcttctctctacatg 3301898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38685183 - 38685021
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  38685183 ttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 38685084  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  38685083 ctgactctcctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatg 38685021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 13561452 - 13561579
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  13561452 ttctatcaaaaaccatagttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 13561551  T
Q  101 ctgactcttctccatttaatctactctt 128  Q
    |||||||| |||||||| ||||||||||    
T  13561552 ctgactctcctccatttgatctactctt 13561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 4496584 - 4496438
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  4496584 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 4496485  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  4496484 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 4496438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14665930 - 14665768
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||  || ||||||||||||| |||  ||||| ||||||| | | |||||| ||||||    
T  14665930 ttctatcataaaccatatttggatccaactcattgacttctaaattcttcctaatggtttctctaatagttttcctaggtctccctctacctcttttaac 14665831  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  14665830 ctgactctgctccatttgatctactcttcttacgacggcatctacgggtcttctctctacatg 14665768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 16347444 - 16347606
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||| |||||| |||||||||||||||| ||||||||||||||||  |||  ||||| ||||||||| | |||||| ||||||    
T  16347444 ttctatcataaaccatatttgtatccaaatcattgacctctaaatcttttctaatggtttctttaatagttttcctaggtcttcctctacctcttttaac 16347543  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||| |||  ||||||||||||||||||||||||||    
T  16347544 ctgactctcctccatttgatctactcttcttgcaaaggcatctacgggtcttctctctacatg 16347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 1287661 - 1287807
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  1287661 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 1287760  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||| ||||||||||||||||    
T  1287761 tgatctactcttcttaccacggcatctacgtgtcttctctctacatg 1287807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 12492466 - 12492612
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  12492466 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 12492565  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||  || ||||||||||||||||||||||||||    
T  12492566 tgatctactcttcttaacacggcatctacgggtcttctctctacatg 12492612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14911388 - 14911264
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  14911388 ttctatcaaaaatcatatttggatccaactcattaacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 14911289  T
Q  101 ctgactcttctccatttaatctact 125  Q
    | |||||| || ||||| |||||||    
T  14911288 ccgactctccttcatttgatctact 14911264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 2075555 - 2075702
Alignment:
Q  17 atttggatccaactcattgacctctaaata-ttttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccat 115  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||  || || ||||||||| | |||||| |||||| ||||||| ||||||    
T  2075555 atttggatccaactcattgacctctaaatccttttctaatggtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccat 2075654  T
Q  116 ttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    || ||||||||||||||| || ||||||||||||||||||||||||||    
T  2075655 ttgatctactcttcttaccacggcatctacgggtcttctctctacatg 2075702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 20456989 - 20456827
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | |||| |||| ||| ||||| ||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| ||||||    
T  20456989 ttctatcatacatcaaatttagattcaacttattgacctctaaatcctttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaac 20456890  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  20456889 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtcttctctctacatg 20456827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 24178710 - 24178564
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  24178710 atttggatccaactcattgaactctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 24178611  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || |||||||||||||||||||| |||||    
T  24178610 tgatctactcttcttaccacggcatctacgggtcttctctccacatg 24178564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 2915577 - 2915719
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  || || ||||||||| | |||||| |||||| ||||||| |||||||    
T  2915577 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatt 2915676  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    | ||||||||||||||| |  ||||||||||||||||||||||    
T  2915677 tgatctactcttcttaccaaggcatctacgggtcttctctcta 2915719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 28976941 - 28977087
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  ||| |||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||| |||||||    
T  28976941 atttggatccaactcattgacctctaaatcctttataatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatt 28977040  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||||| || |||| |||||||||||||||||||||    
T  28977041 tgatctacccttcttaccacggcatatacgggtcttctctctacatg 28977087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 10639502 - 10639358
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| ||||||  |||||||    
T  10639502 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactc--ctccatt 10639405  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |  |||||||||||||| |  |||||||| |||||||||||||||||    
T  10639404 tgttctactcttcttaccatggcatctacaggtcttctctctacatg 10639358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 38501484 - 38501646
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||   ||  || || |||||||||||  | ||| ||| |     
T  38501484 ttctatcataaatcatatttggatccaacttattgacctctaaatactttctaatagtttcttttatagttctcctaggtcttcatccatctcttttgat 38501583  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | |||||| |||||| ||||||||||||||||| || ||||||||  ||||||||| ||||||    
T  38501584 ccgactctcctccatctaatctactcttcttacgacggcatctacaagtcttctctttacatg 38501646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 1275480 - 1275318
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||| | || |||||||| ||||| ||| ||||||||||  ||| |||||||||||| |||  ||||  ||||||||| | |||| |  |||||    
T  1275480 ttctatcaaacaccaaatttggattcaactgattaacctctaaatcctttataatggtttctctaatagtttttctaggtcttcctctacccctgttaac 1275381  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
     ||||||| |||||||| ||||||||||||||| || |||| ||||| |||||||||||||||    
T  1275380 ttgactctcctccatttgatctactcttcttaccacggcatttacggatcttctctctacatg 1275318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 34273213 - 34273122
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactct 108  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||||||||| | |||||| |||||| |||||||    
T  34273213 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactct 34273122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 29816582 - 29816515
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  29816582 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 29816515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16913949 - 16914011
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  16913949 ttctatcgtaaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctc 16914011  T

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Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28098 - 28036
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||| ||| ||||| |||||||    
T  28098 ttctatcagaaatcatatttggatccaacttattaacctctaaatctttcctaatagtttctc 28036  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 31220598 - 31220546
Alignment:
Q  2 tctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaa 54  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||| ||||||||    
T  31220598 tctatcaaaaatcatatttagatccaactcattgatctcaaaatcttttctaa 31220546  T

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Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 28276454 - 28276392
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| |||  ||||||| |||||||| ||||||||||||||  ||||||||||||||||    
T  28276454 ttctatcataaacaatatttgaatccaacttattgacctctaaattctttctaatggtttctc 28276392  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5558357 - 5558314
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaa 44  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||    
T  5558357 ttctatcataaaccatatttggatcctactcattgacctctaaa 5558314  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 39040969 - 39040918
Alignment:
Q  4 tatcaaaaatcatatttggatccaactcattgacctctaaatattttctaat 55  Q
    ||||||||| ||||||| ||| ||||| |||||||||||||| |||||||||    
T  39040969 tatcaaaaaccatatttagatgcaacttattgacctctaaatcttttctaat 39040918  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 36215704 - 36215642
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||||| || |||| ||||||| ||| | |||||||||||||| |||| ||||||||||||    
T  36215704 ttctatcataagtcatgtttggattcaattaattgacctctaaatcttttttaatggtttctc 36215642  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 2552982 - 2552926
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgatttt 73  Q
    ||||||||||||||||||||| |||||||  ||| ||||| |||||| ||| |||||    
T  2552982 atttggatccaactcattgacatctaaatcctttttaatgctttctctaattatttt 2552926  T

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Target: scaffold0570 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 1030 - 1176
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| |||  ||||| ||||||||| | |||||| |||||  |||||||||||||||    
T  1030 atttggatccaactcattgacctctaaatcttttttaatggtttctctaatagttttcctaggtcttcctctacctcttttaatttgactcttctccatt 1129  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || ||||||||||||||||||||||||||    
T  1130 tgatctactcttcttaccacggcatctacgggtcttctctctacatg 1176  T

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Target: scaffold0041 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16794 - 16687
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||| ||||||    
T  16794 ttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 16695  T
Q  101 ctgactct 108  Q
    ||||||||    
T  16694 ctgactct 16687  T

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Target: scaffold0018 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 31668 - 31522
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| | ||||||| | ||| || |||||| ||||||| |||||||    
T  31668 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctgggtcttcctctacatcttttaacttgactctcctccatt 31569  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| |  ||||||||||||||||||||||||||    
T  31568 tgatctactcttcttaccatggcatctacgggtcttctctctacatg 31522  T

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Target: scaffold0045 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 86675 - 86837
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| | ||||||||||||||||||   | |||||||||||  |||||| ||||||||| ||   ||||| ||||||| ||| |||||| ||||||    
T  86675 ttctatcatacatcatatttggatccaacctgtcgacctctaaatcctttctagtggtttctctaacagttttcctaggtctccatctacctcttttaac 86774  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||||||||||||| ||||||    
T  86775 ctgactctcctccatttgatctactcttcttacgacggcatctacgggtcttctctttacatg 86837  T

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Target: scaffold0024 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 82934 - 82779
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||  ||||| ||||||||| | ||||||  |||||    
T  82934 ttctatcataaatcatatttggatccaactcattgacctctaaatcctttctaatggtttctc-tatagttttcctaggtcttcctctacctctcttaac 82836  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgggtcttctctcta 159  Q
    |  ||||| |||||||| || ||| |||||||| || ||||||| || |||||||||||    
T  82835 c--actctcctccatttgatatacccttcttacgactgcatctatggatcttctctcta 82779  T

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Target: scaffold0692 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 4852 - 4706
Alignment:
Q  1 ttctatcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaac 100  Q
    |||||||| ||| |||||||||||  ||||||||||| |||||||  ||||||||||||||||  ||| ||||| || | |||||| |||||| |||||     
T  4852 ttctatcataaaccatatttggatttaactcattgacgtctaaatcctttctaatggtttctcttatggttttcctacgccttcatctacctcttttaat 4753  T
Q  101 ctgactcttctccatttaatctactcttcttacaaccgcatctacgg 147  Q
    || ||||| |||||| | ||||||||||||||| || ||||||||||    
T  4752 cttactctcctccatctgatctactcttcttacgacggcatctacgg 4706  T

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Target: scaffold0113 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 11629 - 11775
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||||||||||||  |||||| |||||||  ||||||| | |||||| |||  ||||| ||||| ||| | |||||| | |||| |||||||  ||||||    
T  11629 atttggatccaaccaattgacttctaaattctttctaacgatttctctaatagttttcctaggtattcgtctacctcttctaacttgactctcatccatt 11728  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||  || |||||||||||||||| |||||||||    
T  11729 tgatctactcttcttatgacggcatctacgggtcttcgctctacatg 11775  T

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Target: scaffold0157 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 25614 - 25681
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttc 84  Q
    |||||||||||||||||||||||||||||  |||||||||||||||| |||  ||||| |||||||||    
T  25614 atttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 25681  T

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Target: scaffold0036 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 4363 - 4499
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctcgaatgattttcttaggtcttcatttacctcatttaacctgactcttctccatt 116  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||| |||  ||||| ||          |||||| |||||| ||| ||| |||||||    
T  4363 atttagatccaactcattgacctctaaatcctttctaatggtttctctaatagttttccta----------tacctcttttaacttgattctcctccatt 4452  T
Q  117 taatctactcttcttacaaccgcatctacgggtcttctctctacatg 163  Q
    | ||||||||||||||| || || |||||| ||||||| ||||||||    
T  4453 tgatctactcttcttaccacagcttctacgagtcttctttctacatg 4499  T

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Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 14795 - 14737
Alignment:
Q  5 atcaaaaatcatatttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||| ||| |||||||| ||||||||||||||||| |||||  ||||||||||||||||    
T  14795 atcataaaccatatttgaatccaactcattgacctttaaatcctttctaatggtttctc 14737  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 531 - 485
Alignment:
Q  17 atttggatccaactcattgacctctaaatattttctaatggtttctc 63  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||    
T  531 atttgggtacaactcattgacctctaaatcctttctaatggtttctc 485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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