View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17075_low_9 (Length: 271)
Name: NF17075_low_9
Description: NF17075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17075_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 42899533 - 42899292
Alignment:
| Q |
20 |
gatttgaatgaagaatatttccagcaaaagtatcctcaaaagaagttccatgaaatccagaagaagagaaagagttgtttatcatttggtcttcacatga |
119 |
Q |
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| T |
42899533 |
gatttgaatgaagaatatttccagcaaaagtatcctcaaaagaagttccatgaaatccagaagaagagaaagagttgtttatcatttggtcttcacatga |
42899434 |
T |
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| Q |
120 |
ggacaaattcaaactaaaattaccatttgagtttatcatgttgttggtggcagagtcaacaatagacacgtgaccctgttggtgggtcccactcatcatg |
219 |
Q |
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| T |
42899433 |
ggacaaattcaaactaaaattaccatttgagtttatcatgttgttggtggcagagtcaacaatagacacgtgaccctgttggtgggtcccactcatcatg |
42899334 |
T |
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| Q |
220 |
gactgtgatgagcatgagctggttgcacccatctgtgctgct |
261 |
Q |
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| T |
42899333 |
gactgtgatgagcatgagctggttgcacccatctgagctgct |
42899292 |
T |
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