View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17076_low_4 (Length: 237)

Name: NF17076_low_4
Description: NF17076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17076_low_4
NF17076_low_4
[»] chr3 (42 HSPs)
chr3 (18-219)||(13414423-13414624)
chr3 (36-123)||(14027979-14028066)
chr3 (36-127)||(35222908-35223001)
chr3 (52-128)||(13845520-13845596)
chr3 (84-128)||(7928470-7928514)
chr3 (84-128)||(40993330-40993374)
chr3 (82-129)||(25093520-25093567)
chr3 (82-128)||(8383275-8383321)
chr3 (82-128)||(8789545-8789591)
chr3 (81-128)||(2941575-2941622)
chr3 (78-124)||(38731232-38731278)
chr3 (82-128)||(49505149-49505195)
chr3 (82-123)||(8039835-8039876)
chr3 (83-128)||(11507470-11507515)
chr3 (111-164)||(21367329-21367382)
chr3 (28-68)||(41961713-41961753)
chr3 (82-129)||(6780413-6780460)
chr3 (37-128)||(10954922-10955016)
chr3 (82-129)||(20691337-20691384)
chr3 (82-128)||(7614410-7614456)
chr3 (28-129)||(11251942-11252041)
chr3 (29-128)||(20503429-20503529)
chr3 (86-128)||(25775531-25775573)
chr3 (82-128)||(45451571-45451617)
chr3 (82-119)||(10690266-10690303)
chr3 (92-129)||(15505784-15505821)
chr3 (84-121)||(17005621-17005658)
chr3 (84-125)||(18426969-18427010)
chr3 (84-129)||(20389636-20389680)
chr3 (84-117)||(29508464-29508497)
chr3 (118-171)||(34185048-34185101)
chr3 (118-167)||(41961579-41961628)
chr3 (82-123)||(48353731-48353772)
chr3 (84-129)||(51206347-51206392)
chr3 (92-128)||(3631712-3631748)
chr3 (36-68)||(10318103-10318135)
chr3 (36-68)||(10335349-10335381)
chr3 (91-155)||(12674468-12674530)
chr3 (36-68)||(24205104-24205136)
chr3 (84-128)||(24633396-24633440)
chr3 (119-167)||(40993275-40993323)
chr3 (84-128)||(55401095-55401139)
[»] chr6 (42 HSPs)
chr6 (82-148)||(21924910-21924976)
chr6 (82-164)||(9025448-9025535)
chr6 (26-167)||(4388049-4388199)
chr6 (82-129)||(7265587-7265634)
chr6 (84-167)||(7938136-7938219)
chr6 (28-128)||(34595090-34595198)
chr6 (45-128)||(5626691-5626776)
chr6 (36-123)||(16488590-16488679)
chr6 (40-128)||(7377953-7378043)
chr6 (82-128)||(19040370-19040416)
chr6 (36-123)||(18367801-18367895)
chr6 (36-128)||(28715267-28715359)
chr6 (84-123)||(7027262-7027301)
chr6 (82-129)||(13360366-13360413)
chr6 (82-128)||(5732505-5732551)
chr6 (82-124)||(9629401-9629443)
chr6 (82-128)||(13364700-13364746)
chr6 (26-123)||(34073347-34073452)
chr6 (82-123)||(7996378-7996419)
chr6 (82-123)||(8022382-8022423)
chr6 (82-123)||(9617452-9617493)
chr6 (82-123)||(26562707-26562748)
chr6 (84-128)||(1700372-1700416)
chr6 (84-128)||(12627572-12627616)
chr6 (84-128)||(28152118-28152162)
chr6 (84-128)||(33001284-33001328)
chr6 (82-121)||(7086813-7086852)
chr6 (82-121)||(9658897-9658936)
chr6 (82-117)||(11591876-11591911)
chr6 (82-128)||(31579222-31579266)
chr6 (82-125)||(32511664-32511707)
chr6 (86-167)||(9027200-9027286)
chr6 (94-128)||(30851630-30851664)
chr6 (83-128)||(7740660-7740705)
chr6 (92-129)||(7977824-7977861)
chr6 (82-123)||(9195754-9195795)
chr6 (118-167)||(17327590-17327639)
chr6 (130-167)||(32839571-32839608)
chr6 (92-128)||(12690444-12690480)
chr6 (92-128)||(16388212-16388248)
chr6 (82-122)||(19044482-19044522)
chr6 (82-118)||(30866149-30866185)
[»] chr2 (39 HSPs)
chr2 (62-129)||(20242721-20242788)
chr2 (59-123)||(34784982-34785046)
chr2 (36-123)||(36096375-36096464)
chr2 (78-135)||(20922916-20922973)
chr2 (84-128)||(34691800-34691844)
chr2 (84-128)||(34714212-34714256)
chr2 (85-128)||(5367213-5367256)
chr2 (82-121)||(39279693-39279732)
chr2 (41-123)||(44860297-44860379)
chr2 (82-165)||(42832234-42832317)
chr2 (26-128)||(24009263-24009359)
chr2 (82-123)||(35056886-35056927)
chr2 (84-128)||(2438714-2438758)
chr2 (82-122)||(18889592-18889632)
chr2 (84-128)||(19536392-19536436)
chr2 (82-122)||(38355888-38355928)
chr2 (82-141)||(8300201-8300260)
chr2 (82-125)||(23718044-23718087)
chr2 (82-125)||(24105716-24105759)
chr2 (62-121)||(41843439-41843498)
chr2 (118-169)||(41843516-41843567)
chr2 (82-168)||(25072718-25072803)
chr2 (82-128)||(31018608-31018654)
chr2 (82-128)||(37411239-37411285)
chr2 (82-115)||(21616780-21616813)
chr2 (87-128)||(28596492-28596533)
chr2 (82-119)||(30527599-30527636)
chr2 (84-121)||(31808097-31808134)
chr2 (78-114)||(2665897-2665933)
chr2 (84-128)||(5040754-5040798)
chr2 (84-128)||(5473348-5473392)
chr2 (36-68)||(18054867-18054899)
chr2 (82-122)||(18276539-18276579)
chr2 (92-128)||(21624295-21624331)
chr2 (85-117)||(28524447-28524479)
chr2 (84-124)||(28677929-28677968)
chr2 (84-128)||(30404845-30404889)
chr2 (92-128)||(31855803-31855839)
chr2 (119-167)||(34784911-34784959)
[»] chr7 (46 HSPs)
chr7 (36-109)||(1656648-1656721)
chr7 (73-128)||(39138453-39138508)
chr7 (78-128)||(18213028-18213078)
chr7 (82-129)||(20549809-20549856)
chr7 (82-123)||(5548694-5548735)
chr7 (82-123)||(22602710-22602751)
chr7 (82-126)||(9482952-9482996)
chr7 (36-123)||(9778472-9778559)
chr7 (78-121)||(17851445-17851488)
chr7 (82-128)||(3721111-3721157)
chr7 (77-127)||(5835260-5835310)
chr7 (85-122)||(640134-640171)
chr7 (78-127)||(24146830-24146879)
chr7 (82-167)||(28155588-28155673)
chr7 (82-127)||(32287459-32287504)
chr7 (28-68)||(4017857-4017897)
chr7 (84-128)||(15680829-15680873)
chr7 (84-128)||(26733324-26733368)
chr7 (29-68)||(43249950-43249989)
chr7 (78-120)||(2948697-2948739)
chr7 (82-120)||(3520345-3520383)
chr7 (111-169)||(6490779-6490837)
chr7 (28-62)||(10230134-10230168)
chr7 (82-128)||(12278853-12278898)
chr7 (82-128)||(21880170-21880216)
chr7 (82-116)||(22868060-22868094)
chr7 (118-167)||(598278-598327)
chr7 (82-123)||(7328691-7328732)
chr7 (78-123)||(7758336-7758381)
chr7 (94-123)||(9949071-9949100)
chr7 (84-121)||(15902842-15902879)
chr7 (82-123)||(16341514-16341555)
chr7 (82-123)||(17307911-17307952)
chr7 (130-167)||(18212973-18213010)
chr7 (79-128)||(18226959-18227008)
chr7 (82-123)||(19992019-19992060)
chr7 (78-127)||(22484039-22484088)
chr7 (82-119)||(27732243-27732280)
chr7 (82-123)||(32308138-32308179)
chr7 (28-57)||(38804617-38804646)
chr7 (118-167)||(40131939-40131988)
chr7 (32-68)||(11722161-11722197)
chr7 (36-108)||(13300382-13300454)
chr7 (82-122)||(19206068-19206108)
chr7 (84-128)||(21826293-21826337)
chr7 (84-128)||(25481922-25481966)
[»] chr1 (58 HSPs)
chr1 (37-128)||(30749807-30749904)
chr1 (37-128)||(30771258-30771355)
chr1 (84-128)||(52903269-52903313)
chr1 (85-167)||(13436479-13436562)
chr1 (36-128)||(22881611-22881705)
chr1 (78-129)||(39130761-39130812)
chr1 (78-129)||(39953140-39953191)
chr1 (82-129)||(40181889-40181936)
chr1 (82-128)||(1864875-1864921)
chr1 (45-123)||(25361867-25361945)
chr1 (37-169)||(35702540-35702676)
chr1 (28-69)||(12242517-12242558)
chr1 (82-123)||(34371731-34371772)
chr1 (82-123)||(44482248-44482289)
chr1 (36-128)||(10577730-10577830)
chr1 (82-128)||(9709838-9709884)
chr1 (82-128)||(14332637-14332683)
chr1 (36-119)||(25934592-25934671)
chr1 (82-128)||(36878479-36878525)
chr1 (82-123)||(7918211-7918252)
chr1 (84-121)||(13997903-13997940)
chr1 (84-129)||(18337349-18337394)
chr1 (82-123)||(20157350-20157391)
chr1 (83-128)||(29163376-29163421)
chr1 (84-128)||(5898261-5898305)
chr1 (82-165)||(25452108-25452189)
chr1 (82-122)||(38503338-38503378)
chr1 (84-128)||(51410045-51410089)
chr1 (84-123)||(1486709-1486748)
chr1 (82-129)||(2784574-2784621)
chr1 (84-123)||(5944303-5944342)
chr1 (84-123)||(9828064-9828103)
chr1 (82-121)||(10233271-10233310)
chr1 (83-126)||(17705584-17705626)
chr1 (82-129)||(23636043-23636090)
chr1 (84-123)||(48148037-48148076)
chr1 (78-128)||(1815271-1815321)
chr1 (82-167)||(2288125-2288208)
chr1 (82-148)||(12443436-12443501)
chr1 (39-129)||(18190102-18190192)
chr1 (124-170)||(18556382-18556428)
chr1 (94-128)||(37598861-37598895)
chr1 (85-127)||(38075966-38076008)
chr1 (54-128)||(40258928-40259002)
chr1 (26-68)||(42005026-42005068)
chr1 (82-123)||(6427368-6427409)
chr1 (92-167)||(24334664-24334736)
chr1 (37-123)||(24577186-24577274)
chr1 (82-115)||(25098563-25098596)
chr1 (82-123)||(25272500-25272541)
chr1 (92-128)||(19058851-19058887)
chr1 (82-114)||(19324580-19324612)
chr1 (84-128)||(22515882-22515926)
chr1 (92-128)||(24462671-24462707)
chr1 (84-128)||(38078656-38078700)
chr1 (28-68)||(40917707-40917747)
chr1 (118-166)||(45534131-45534179)
chr1 (84-128)||(46348378-46348422)
[»] chr5 (35 HSPs)
chr5 (60-155)||(32426837-32426932)
chr5 (84-167)||(6247642-6247729)
chr5 (36-123)||(6401462-6401557)
chr5 (36-123)||(21814231-21814320)
chr5 (58-119)||(39758266-39758327)
chr5 (36-123)||(19453066-19453153)
chr5 (82-128)||(26312787-26312833)
chr5 (82-128)||(28588669-28588715)
chr5 (82-128)||(30502383-30502429)
chr5 (82-128)||(30542726-30542772)
chr5 (82-167)||(6326253-6326338)
chr5 (43-125)||(30099036-30099120)
chr5 (79-128)||(42029767-42029816)
chr5 (43-123)||(6471889-6471969)
chr5 (82-128)||(18421836-18421882)
chr5 (82-128)||(34879368-34879414)
chr5 (82-123)||(3966521-3966562)
chr5 (82-127)||(16203791-16203836)
chr5 (84-129)||(21191050-21191095)
chr5 (82-123)||(41091257-41091298)
chr5 (84-128)||(15884008-15884052)
chr5 (28-68)||(21137645-21137685)
chr5 (84-128)||(43564901-43564945)
chr5 (82-128)||(2548405-2548451)
chr5 (82-128)||(17925167-17925213)
chr5 (82-128)||(23012403-23012449)
chr5 (84-129)||(33178045-33178090)
chr5 (82-123)||(36838561-36838602)
chr5 (84-128)||(14422922-14422966)
chr5 (82-122)||(14873535-14873575)
chr5 (112-168)||(19429491-19429547)
chr5 (84-128)||(21576740-21576784)
chr5 (36-68)||(23016054-23016086)
chr5 (82-114)||(24273039-24273071)
chr5 (82-114)||(24389143-24389175)
[»] chr4 (44 HSPs)
chr4 (82-166)||(17425348-17425430)
chr4 (82-165)||(16189727-16189813)
chr4 (82-165)||(22440559-22440641)
chr4 (37-127)||(9996813-9996903)
chr4 (84-128)||(40179631-40179675)
chr4 (52-123)||(46083991-46084063)
chr4 (84-128)||(54580018-54580062)
chr4 (82-128)||(8423713-8423759)
chr4 (82-167)||(10499227-10499311)
chr4 (82-119)||(26504303-26504340)
chr4 (78-123)||(44132644-44132689)
chr4 (36-128)||(4157122-4157213)
chr4 (82-122)||(5775359-5775399)
chr4 (84-128)||(12797333-12797377)
chr4 (82-118)||(40613468-40613504)
chr4 (84-128)||(42640549-42640593)
chr4 (84-128)||(49431046-49431090)
chr4 (39-123)||(5414172-5414264)
chr4 (84-123)||(22234890-22234929)
chr4 (82-128)||(8402737-8402783)
chr4 (94-128)||(20950422-20950456)
chr4 (101-147)||(30094066-30094112)
chr4 (82-123)||(7970537-7970578)
chr4 (82-123)||(13134468-13134509)
chr4 (87-124)||(15029788-15029825)
chr4 (78-123)||(19097894-19097939)
chr4 (124-169)||(28964186-28964231)
chr4 (82-123)||(30982878-30982919)
chr4 (82-115)||(36635342-36635375)
chr4 (94-127)||(42014989-42015022)
chr4 (82-123)||(46160914-46160955)
chr4 (92-128)||(482233-482269)
chr4 (119-167)||(715545-715593)
chr4 (119-167)||(752871-752919)
chr4 (84-128)||(6879460-6879504)
chr4 (84-128)||(12895269-12895313)
chr4 (92-128)||(16073422-16073458)
chr4 (82-122)||(18576038-18576078)
chr4 (27-67)||(21945458-21945498)
chr4 (84-128)||(23292981-23293025)
chr4 (36-68)||(24343471-24343503)
chr4 (84-128)||(28964243-28964287)
chr4 (84-128)||(29205464-29205508)
chr4 (84-128)||(35157980-35158024)
[»] scaffold0279 (1 HSPs)
scaffold0279 (28-128)||(17735-17834)
[»] chr8 (35 HSPs)
chr8 (82-125)||(4786336-4786379)
chr8 (82-129)||(34897103-34897150)
chr8 (82-128)||(13844591-13844637)
chr8 (81-123)||(26902175-26902217)
chr8 (36-128)||(3951531-3951624)
chr8 (95-167)||(11833893-11833969)
chr8 (84-123)||(11927086-11927125)
chr8 (78-121)||(18964191-18964234)
chr8 (82-172)||(27213565-27213649)
chr8 (36-128)||(43737806-43737908)
chr8 (82-128)||(3025569-3025615)
chr8 (85-123)||(8847277-8847315)
chr8 (78-128)||(28747430-28747480)
chr8 (82-128)||(31236572-31236618)
chr8 (82-128)||(33405379-33405425)
chr8 (82-127)||(12606825-12606870)
chr8 (84-128)||(4948672-4948716)
chr8 (82-122)||(14134717-14134757)
chr8 (40-167)||(25566817-25566949)
chr8 (82-121)||(11803277-11803316)
chr8 (84-123)||(11944685-11944724)
chr8 (82-129)||(12985410-12985457)
chr8 (37-128)||(40332170-40332255)
chr8 (37-123)||(16641974-16642060)
chr8 (92-122)||(28384995-28385025)
chr8 (82-128)||(38079017-38079063)
chr8 (93-122)||(8293854-8293883)
chr8 (82-127)||(31109514-31109559)
chr8 (78-123)||(34451037-34451082)
chr8 (36-68)||(926851-926883)
chr8 (82-122)||(20679396-20679436)
chr8 (84-128)||(20873089-20873133)
chr8 (84-128)||(24613540-24613584)
chr8 (82-126)||(31580124-31580168)
chr8 (82-122)||(33382020-33382060)
[»] scaffold0003 (2 HSPs)
scaffold0003 (26-68)||(241548-241590)
scaffold0003 (118-167)||(241675-241724)
[»] scaffold0116 (1 HSPs)
scaffold0116 (36-123)||(9862-9957)
[»] scaffold0623 (1 HSPs)
scaffold0623 (78-123)||(5996-6041)
[»] scaffold0123 (1 HSPs)
scaffold0123 (82-119)||(44529-44566)
[»] scaffold0036 (1 HSPs)
scaffold0036 (82-123)||(9747-9788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (82-123)||(135312-135353)
[»] scaffold0050 (1 HSPs)
scaffold0050 (92-128)||(70306-70342)
[»] scaffold0171 (1 HSPs)
scaffold0171 (84-123)||(23440-23479)
[»] scaffold0022 (2 HSPs)
scaffold0022 (82-129)||(90861-90908)
scaffold0022 (78-123)||(99907-99952)
[»] scaffold0122 (1 HSPs)
scaffold0122 (132-166)||(8761-8795)
[»] scaffold0044 (1 HSPs)
scaffold0044 (82-120)||(53198-53236)
[»] scaffold0236 (1 HSPs)
scaffold0236 (82-123)||(25768-25809)
[»] scaffold0793 (1 HSPs)
scaffold0793 (119-167)||(4821-4869)
[»] scaffold0652 (1 HSPs)
scaffold0652 (84-128)||(457-501)
[»] scaffold0227 (1 HSPs)
scaffold0227 (124-172)||(15047-15095)
[»] scaffold0083 (1 HSPs)
scaffold0083 (92-128)||(45525-45561)
[»] scaffold0053 (1 HSPs)
scaffold0053 (36-68)||(8762-8794)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-68)||(225331-225363)


Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 13414423 - 13414624
Alignment:
Q  18 tgatgaatatctatgaagcacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcg 117  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13414423 tgatgaatatctatgaagcacggacaccagacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcg 13414522  T
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagttgaatattaaagaaccttgcttgtttctaacatcctataaaatgaatta 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13414523 gtgtcggacacagggacacgccttatccgagaagtgtctatacttcatagttgaatattaaagaaccttgcttgtttctaacatcctataaaatgaatta 13414622  T
Q  218 tt 219  Q
    ||    
T  13414623 tt 13414624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 14027979 - 14028066
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||||||||||||||||||||||| | || | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  14027979 cacggacaccggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 14028066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 35222908 - 35223001
Alignment:
Q  36 cacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||| |||||||||| |||||  ||||||||| ||   ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  35222908 cacggacaccagacacgacacagacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 13845596 - 13845520
Alignment:
Q  52 gacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||   |||| ||||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  13845596 gacacggacaccgacacagttaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 13845520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 7928470 - 7928514
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  7928470 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40993374 - 40993330
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 40993330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 25093520 - 25093567
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacaca 25093567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 8383275 - 8383321
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8383275 agaaaatcatataattcagtgtaattataagtgtcggtgtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 8789591 - 8789545
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  8789591 agaaaatcacataattccgtgtaattatatgtgtcggtgtcggacac 8789545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 2941575 - 2941622
Alignment:
Q  81 tagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||| | ||| |||||||||||||||||||||||||||||||    
T  2941575 tagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacac 2941622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 38731232 - 38731278
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcgg 124  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  38731232 ttttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 49505195 - 49505149
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||| |||||||||||||||||| |||||||||||    
T  49505195 agaaaatcacataatttagtgtaattatatgtgtcagtgtcggacac 49505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 8039876 - 8039835
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  8039876 agaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 11507515 - 11507470
Alignment:
Q  83 gaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggtatcggacac 11507470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 21367329 - 21367382
Alignment:
Q  111 tgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttca 164  Q
    ||||||||||||||||||  |||||| ||| ||||||||||||||| |||||||    
T  21367329 tgtgtcggtgtcggacacttggacacacctaatccgagaagtgtctgtgcttca 21367382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 41961753 - 41961713
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  41961753 ctatgaagcacggacaccggacacgacacagacactgacac 41961713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 6780460 - 6780413
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    |||||||||  || |||||||||||||||||||| |||||||||||||    
T  6780460 agaaaatcacgtagttcagtgtaattatatgtgttggtgtcggacaca 6780413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 10954922 - 10955016
Alignment:
Q  37 acggacaccggacacga-cacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| ||| |||||  ||||||||| ||   ||| | ||||||| ||||||||||||||| | | |||||||||||||||||    
T  10954922 acggacaccggacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacac 10955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 20691337 - 20691384
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| | ||||||||||||||| ||||||||||||||| ||||||    
T  20691337 agaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacaca 20691384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 7614456 - 7614410
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||| ||||||||| ||||||||||| ||||    
T  7614456 agaaaatcacataattcagtataattatatatgtcggtgtcgaacac 7614410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 11251942 - 11252041
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||||||||||  | ||||||| |||||| ||||   | ||   ||| ||||||||| |||||||||||||||  |||||||||||||| ||||    
T  11251942 ctatgaagcacggacactagtcacgacatggacactgacattgctaataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcagaca 11252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 20503429 - 20503529
Alignment:
Q  29 tatgaagcacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggac 126  Q
    ||||||||||||| || ||||||||||| |||||  ||||||||| ||   ||| | ||||| | ||||||||||||||||| | |||||||||| ||||    
T  20503429 tatgaagcacggatac-ggacacgacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggac 20503527  T
Q  127 ac 128  Q
    ||    
T  20503528 ac 20503529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 25775531 - 25775573
Alignment:
Q  86 aatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||| ||||||||||||||||| | |||||||||||||||||    
T  25775531 aatcacataattcagtgtaattacaagtgtcggtgtcggacac 25775573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 45451571 - 45451617
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||| |||||| |||| |||||||||||||||||||||    
T  45451571 agaaaatcacatacttcagtataataatatgtgtcggtgtcggacac 45451617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 10690303 - 10690266
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  10690303 agaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 15505821 - 15505784
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  15505821 ataattcagtgtaattataagtgttggtgtcggacaca 15505784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 17005658 - 17005621
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  17005658 aaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 18426969 - 18427010
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||||| ||||||| |||||||||||| |||||||||||||    
T  18426969 aaaatcacataattcggtgtaattatatatgtcggtgtcgga 18427010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 20389636 - 20389680
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||    
T  20389636 aaaatcacataattcagtgtaa-tatatgcgtcggtgtcggacaca 20389680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 117
Target Start/End: Original strand, 29508464 - 29508497
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcg 117  Q
    ||||||| ||||||||||||||||||||||||||    
T  29508464 aaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 34185101 - 34185048
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagttga 171  Q
    ||||| ||||| ||||||||||| ||||||| ||||||  ||||||||||||||    
T  34185101 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagttga 34185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 41961628 - 41961579
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| ||||| ||||||||||| ||||||||||||||  ||||||||||    
T  41961628 gtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 48353772 - 48353731
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||||| | ||||||||||||| |||||||||    
T  48353772 agaaaatcaaataattaattgtaattatatgtatcggtgtcg 48353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 51206392 - 51206347
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| |||||||||||||| || | ||||||||||||||||||    
T  51206392 aaaatcacataattcagtgtaaatacaagtgtcggtgtcggacaca 51206347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 3631712 - 3631748
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||||||| | |||||||||||    
T  3631712 ataattcagtgtaattatatgtgccagtgtcggacac 3631748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 10318135 - 10318103
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  10318135 cacggacaccggacacgacacggacacggacac 10318103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 10335381 - 10335349
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  10335381 cacggacaccggacacgacacggacactgacac 10335349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 12674530 - 12674468
Alignment:
Q  91 aataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtc 155  Q
    |||||||||||||||||  ||||||| |||||||| ||| ||||||||| |||||||| ||||||    
T  12674530 aataattcagtgtaattgcatgtgtc-gtgtcggatacatggacacgcc-tatccgaggagtgtc 12674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 24205136 - 24205104
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  24205136 cacggacaccggacacgacacggacactgacac 24205104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 24633440 - 24633396
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||  ||||||| ||||||||||||||||||||| ||||||    
T  24633440 aaaatcacgtaattcaatgtaattatatgtgtcggtgttggacac 24633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 40993323 - 40993275
Alignment:
Q  119 tgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||| ||||| ||||||||||| ||||||| |||||| |||||||||||    
T  40993323 tgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 55401095 - 55401139
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  55401095 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 55401139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 21924976 - 21924910
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgag 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  21924976 agaatatcaaataattcagtgtaattatatgtgtcggtgtcggacaccgggacacgcctaatccgag 21924910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 9025535 - 9025448
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg-----gacacagggacacgccttatccgagaagtgtctatgcttca 164  Q
    ||||||||| ||||||||||||||||||||||||||||||||     ||||| ||||||||||| ||||||||||||||  |||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 4388049 - 4388199
Alignment:
Q  26 atctatgaagcacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgt---------- 115  Q
    |||||||||||| |||| ||||||| |||||| ||||| |||   |||| | ||||||||||||| ||||| ||| ||||||||||||||              
T  4388049 atctatgaagcatggacgccggacaagacacgaacaccaacag--ccaatttttttagaaaatcacataatccagggtaattatatgtgtcagtgtcgtg 4388146  T
Q  116 -cggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
     ||||||| |||||  |||||||||||||||||||||||||| ||||||||||    
T  4388147 gcggtgtctgacacgaggacacgccttatccgagaagtgtctgtgcttcatag 4388199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 7265634 - 7265587
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 7265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 7938136 - 7938219
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||| |||||| |||||||||||| ||||||||||| ||||| | ||||||||| ||||||| ||||||  ||||||||||    
T  7938136 aaaatcatataatttagtgtaattataagtgtcggtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 34595090 - 34595198
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggaca--------ccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||||||||||||||||||||||||||||        |||||||||| ||   ||| | ||||||| ||||||||||||||||| | ||||||||    
T  34595090 ctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 34595189  T
Q  120 gtcggacac 128  Q
    |||||||||    
T  34595190 gtcggacac 34595198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 5626776 - 5626691
Alignment:
Q  45 cggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||| |||||  ||||||||| || | |||||||||||||  || |||||||||| ||||||||||||||||||||||    
T  5626776 cggacacgacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggacac 5626691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 16488679 - 16488590
Alignment:
Q  36 cacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||| |||||| ||||||  ||||||| | || | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  16488679 cacggacaccggaaacgacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 7377953 - 7378043
Alignment:
Q  40 gacaccggacacgacacggacacc--gacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||| |||| ||||||  |||||  | |||  ||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  7377953 gacaccggacacaacacagacaccccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacac 7378043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 19040370 - 19040416
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19040370 agaaaatcacataattcagtgtaattatatgtgtctgtgtcggacac 19040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 18367801 - 18367895
Alignment:
Q  36 cacggacaccggacacgacacggacac-------cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||||||||| ||||||       ||||||| | || | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  18367801 cacggacaccggacacgacatggacacgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 28715267 - 28715359
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||||||||| |||||||| |||||  | ||   ||| | ||||| | ||||||||||||||||| | |||||||||||||||||    
T  28715267 cacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacac 28715359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 13360413 - 13360366
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggtgtcagacaca 13360366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 5732551 - 5732505
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||    
T  5732551 agaaaatcacatattttagtgtaattatatgtgtcggtgtcggacac 5732505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 9629401 - 9629443
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcgg 124  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 13364746 - 13364700
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  13364746 agaaaatcatataattcagtgtaatcatatgtgtcggtgttggacac 13364700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 34073452 - 34073347
Alignment:
Q  26 atctatgaagcacggacaccggacacgacacggacaccgaca---caac----caaat-gttttagaaaatcaaataattcagtgtaattatatgtgtcg 117  Q
    ||||||||||||||||||| ||||||||||||||||| ||||   ||||    | |||  ||| ||||||||  ||||||||||||||||||||| ||||    
T  34073452 atctatgaagcacggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcg 34073353  T
Q  118 gtgtcg 123  Q
    ||||||    
T  34073352 gtgtcg 34073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 7996419 - 7996378
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  7996419 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 8022382 - 8022423
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  8022382 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 9617452 - 9617493
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 26562707 - 26562748
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  26562707 agaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 1700372 - 1700416
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||||    
T  1700372 aaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12627616 - 12627572
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||    
T  12627616 aaaatcacataattcagtgtaataatatgtgtcgatgtcggacac 12627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 28152118 - 28152162
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  28152118 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 28152162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 33001328 - 33001284
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| | ||||||||||||||||||||||||||||    
T  33001328 aaaatcacataattaaatgtaattatatgtgtcggtgtcggacac 33001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 7086813 - 7086852
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  7086813 agaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 9658897 - 9658936
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  9658897 agaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 117
Target Start/End: Complemental strand, 11591911 - 11591876
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcg 117  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11591911 agaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 31579266 - 31579222
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||    
T  31579266 agaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacac 31579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 32511707 - 32511664
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||    
T  32511707 agaaaatcacataattcagtgtaattataagtgttggtgtcgga 32511664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 9027200 - 9027286
Alignment:
Q  86 aatcaaataattcagtgtaattatatgtgtcggtgtcg-----gacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| ||||||| ||||||||||||||||||||||||     ||||| |||||||| || |||| || ||||| | ||||||||||    
T  9027200 aatcacataattccgtgtaattatatgtgtcggtgtcgtgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 30851630 - 30851664
Alignment:
Q  94 aattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||| ||||||||||||||||||||||||||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacac 30851664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 7740660 - 7740705
Alignment:
Q  83 gaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||| | |||| |||||||||||||||||| |||||||||||    
T  7740660 gaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacac 7740705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 7977861 - 7977824
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  7977861 ataattcagtgtaattacaagtgtcggtgtcggacaca 7977824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 9195795 - 9195754
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | |||||| |||||||||||||||||||||||||    
T  9195795 agaaaatgacataatttagtgtaattatatgtgtcggtgtcg 9195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 17327639 - 17327590
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| ||||||||||||||||| ||||||| ||||||  ||||||||||    
T  17327639 gtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 32839608 - 32839571
Alignment:
Q  130 gggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  32839608 gggacacgcctaatccgagaagtgtctgtgcttcatag 32839571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 12690444 - 12690480
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  12690444 ataattcaatgtaattatatgtgtcgatgtcggacac 12690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 16388248 - 16388212
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| | |||||||||||||||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacac 16388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 19044482 - 19044522
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    |||| |||| |||||||||||| ||||||||||||||||||    
T  19044482 agaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 30866185 - 30866149
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcgg 118  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  30866185 agaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 20242788 - 20242721
Alignment:
Q  62 ccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    |||||||||| || | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20242788 ccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 20242721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 34785046 - 34784982
Alignment:
Q  59 acaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||| || | ||||||||||||| |||||| |||||||||||||||||||||||||    
T  34785046 acaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcg 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 36096464 - 36096375
Alignment:
Q  36 cacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||| | ||||||||||||||  ||||||| | |||| ||||||||||||| | ||| |||||||||||||| |||||||||||    
T  36096464 cacggacaccaggcacgacacggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcg 36096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 20922973 - 20922916
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggaca 135  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||    
T  20922973 ttttagaaaatcacataatttagtgtaattatatgtgtctgtgtcggacacggggaca 20922916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 34691844 - 34691800
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 34714256 - 34714212
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34714212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 5367213 - 5367256
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcggacac 5367256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 39279693 - 39279732
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39279693 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 44860297 - 44860379
Alignment:
Q  41 acaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||| |||||||||||||||| |||||  | ||   ||| ||||||||  ||||||||||||||||||||||||||||||||    
T  44860297 acaccagacacgacacggacactgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 42832317 - 42832234
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcat 165  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| ||| | ||||||||||| |||| || ||||||  ||||||||    
T  42832317 agaaaattacatatttcagtgtaattataagtgtcggtgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 24009263 - 24009359
Alignment:
Q  26 atctatgaagcacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    |||||||||||||||| || |||||||||||||    ||||||| | || | ||||||||||||| | ||| |||||||| | |||||||||||||||||    
T  24009263 atctatgaagcacggatac-ggacacgacacgg----cgacacagctaatttttttagaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcgga 24009356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 35056886 - 35056927
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||| || ||||||||||||||||||||||||||||||||    
T  35056886 agaaaaccatataattcagtgtaattatatgtgtcggtgtcg 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 2438758 - 2438714
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  2438758 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 2438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 18889632 - 18889592
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 19536436 - 19536392
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 19536392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 38355928 - 38355888
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 8300260 - 8300201
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgcctt 141  Q
    ||||||| | |||||| |||||||| ||| |||||||||| |||||| ||||||||||||    
T  8300260 agaaaatgacataatttagtgtaatcataagtgtcggtgttggacaccgggacacgcctt 8300201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 23718044 - 23718087
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  23718044 agaaagtcacataattcagtgtaattatatgtgtcggtgacgga 23718087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 24105716 - 24105759
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  24105716 agaaagtcacataattcagtgtaattatatgtgtcggtgacgga 24105759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 41843439 - 41843498
Alignment:
Q  62 ccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    |||||| ||| |||| |||||| |||||| ||||||| || |||||||||||||||||||    
T  41843439 ccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgt 41843498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 41843516 - 41843567
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagtt 169  Q
    ||||| ||||| ||||||||| ||||||||| ||||||| ||||||||||||    
T  41843516 gtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatagtt 41843567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 25072718 - 25072803
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagt 168  Q
    |||||||||||||||||| | |||| ||| ||||  |||||||| || ||||||| ||| || || ||||||||| |||||||||||    
T  25072718 agaaaatcaaataattcaatctaataataggtgttagtgtcggatac-gggacacacctaatgcgtgaagtgtctgtgcttcatagt 25072803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 31018608 - 31018654
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| || ||| |||||||||||| |||||||||||||||||    
T  31018608 agaaaatcacatgatttagtgtaattataggtgtcggtgtcggacac 31018654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 37411285 - 37411239
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||||| ||||||||||||| ||||| ||||    
T  37411285 agaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacac 37411239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 21616780 - 21616813
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgt 115  Q
    ||||||||| ||||||||||||||||||||||||    
T  21616780 agaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 28596492 - 28596533
Alignment:
Q  87 atcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  28596492 atcacataagtcagtgtaattataagtgtcggtgtcggacac 28596533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 30527636 - 30527599
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  30527636 agaaaatcatataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 31808097 - 31808134
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 2665933 - 2665897
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtg 114  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  2665933 ttttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 5040754 - 5040798
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||| |||||||| | |||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacac 5040798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 5473348 - 5473392
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||||    
T  5473348 aaaatcacataattcggtgtaatattatgtgtcggtgtcggacac 5473392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 18054899 - 18054867
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    |||||||||||||||||||| ||||||||||||    
T  18054899 cacggacaccggacacgacagggacaccgacac 18054867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 18276539 - 18276579
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    |||||||||  ||||||||||||||||| ||||||||||||    
T  18276539 agaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 21624295 - 21624331
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| | |||||||||||||||||    
T  21624295 ataattcagtgtaattacaagtgtcggtgtcggacac 21624331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 28524447 - 28524479
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcg 117  Q
    |||||| ||||||||||||||||||||||||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 28677929 - 28677968
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcgg 124  Q
    ||||||| |||||||||||||||||||||| ||||||||||    
T  28677929 aaaatcacataattcagtgtaattatatgt-tcggtgtcgg 28677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 30404889 - 30404845
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | ||||||| |||||||||    
T  30404889 aaaatcacataattcagtgtaattacaagtgtcggcgtcggacac 30404845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 31855839 - 31855803
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  31855839 ataattcagtgtaattagatgtgtcggtgtcgaacac 31855803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 34784959 - 34784911
Alignment:
Q  119 tgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||| ||||| |||||||||||||| |||| ||||||| ||||||||||    
T  34784959 tgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 1656648 - 1656721
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattat 109  Q
    |||||| | ||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||    
T  1656648 cacggatatcggacacgacacggacaccgacacaactaaattttttaaaaaatcacataattcagtgtaattat 1656721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 39138453 - 39138508
Alignment:
Q  73 aaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  39138453 aaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacac 39138508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 18213078 - 18213028
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  18213078 ttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacac 18213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 20549809 - 20549856
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||    
T  20549809 agaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacaca 20549856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 5548694 - 5548735
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  5548694 agaaaatcaaataattcagtgtaattatatgtgtcagtgtcg 5548735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 22602751 - 22602710
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 9482952 - 9482996
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggac 126  Q
    ||||||||| | |||||||||||||||||||||||||||||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggac 9482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 9778472 - 9778559
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||||||||||||||||| |||||| |  |   ||| | ||||||| |||||||||| |||||| | ||||||||||||    
T  9778472 cacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 17851445 - 17851488
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  17851445 ttttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 3721111 - 3721157
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  3721111 agaaaatcacataatttagtataattatatgtgtcggtgtcggacac 3721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 5835260 - 5835310
Alignment:
Q  77 gttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||| ||||    
T  5835260 gtttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagaca 5835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 640134 - 640171
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    |||||| |||||||||||||||||||||||||||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 24146830 - 24146879
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||||||| |||||||| | |||||||||||||||||||| ||||    
T  24146830 ttttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 28155588 - 28155673
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||| | ||||||| ||||||||| | |||||||||||||||||  |||||||||| |||| || | ||||  ||||||||||    
T  28155588 agaaaattacataattcggtgtaattacaagtgtcggtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 32287504 - 32287459
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||    
T  32287504 agaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 4017897 - 4017857
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  4017897 ctatgaagcacagacactggacacgacacggacaccgacac 4017857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 15680829 - 15680873
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||    
T  15680829 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 15680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 26733324 - 26733368
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||| |||||| |||||||||||||||||||    
T  26733324 aaaatcacataattcagtctaattaaatgtgtcggtgtcggacac 26733368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 43249950 - 43249989
Alignment:
Q  29 tatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  43249950 tatgaagcacggacaccggacaagacacggacactgacac 43249989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 2948697 - 2948739
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtg 120  Q
    |||||||||||||  ||||| ||||||||||||||||||||||    
T  2948697 ttttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 3520383 - 3520345
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtg 120  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  3520383 agaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 6490779 - 6490837
Alignment:
Q  111 tgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagtt 169  Q
    |||||||||||| ||||| ||||||||| | ||||||| ||||||  ||||||||||||    
T  6490779 tgtgtcggtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagtt 6490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 10230168 - 10230134
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacac 62  Q
    ||||||||||||||||||||||| |||||||||||    
T  10230168 ctatgaagcacggacaccggacatgacacggacac 10230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 12278853 - 12278898
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||    
T  12278853 agaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacac 12278898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 21880170 - 21880216
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| | ||||||||||||||||| | |||||||||||||||||    
T  21880170 agaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 21880216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 116
Target Start/End: Original strand, 22868060 - 22868094
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtc 116  Q
    ||||||||| |||||||||||||||||||||||||    
T  22868060 agaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 598278 - 598327
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| ||||| ||||||||||| ||||||||||||||  ||||||||||    
T  598278 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 7328732 - 7328691
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | |||||| |||||||||||||||||||||||||    
T  7328732 agaaaataacataatttagtgtaattatatgtgtcggtgtcg 7328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 7758336 - 7758381
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||||    
T  7758336 ttttagaaaattatataattcagtataattatgtgtgtcggtgtcg 7758381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 123
Target Start/End: Complemental strand, 9949100 - 9949071
Alignment:
Q  94 aattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||||||||||||||||||||    
T  9949100 aattcagtgtaattatatgtgtcggtgtcg 9949071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 15902842 - 15902879
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  15902842 aaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 16341514 - 16341555
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  16341514 agaaaatcacataattaagtgtaattatatgtgccggtgtcg 16341555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 17307911 - 17307952
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | |||||||||||||||||||||||| |||||||    
T  17307911 agaaaataacataattcagtgtaattatatgtgttggtgtcg 17307952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 18213010 - 18212973
Alignment:
Q  130 gggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  18213010 gggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 18226959 - 18227008
Alignment:
Q  79 tttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||| ||||||| |||||||||| |||| |||||||||||||||| ||||    
T  18226959 tttataaaatcatataattcagtataatcatatgtgtcggtgtcgaacac 18227008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 19992019 - 19992060
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||    
T  19992019 agaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 22484039 - 22484088
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||||   |||||||||| |||||||||||||||||||| ||||    
T  22484039 ttttagaaaattgcataattcagtataattatatgtgtcggtgtcagaca 22484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 27732280 - 27732243
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  27732280 agaaaattacataattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 32308138 - 32308179
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||||||||||| |||||||| ||||||    
T  32308138 agaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 38804646 - 38804617
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacg 57  Q
    ||||||||||||||||||||||||||||||    
T  38804646 ctatgaagcacggacaccggacacgacacg 38804617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 40131988 - 40131939
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| |||||||||||||| || ||||||| ||||||| ||||||||||    
T  40131988 gtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 11722197 - 11722161
Alignment:
Q  32 gaagcacggacaccggacacgacacggacaccgacac 68  Q
    |||||||||| |||||||||||||||||||| |||||    
T  11722197 gaagcacggataccggacacgacacggacactgacac 11722161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 13300382 - 13300454
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaatta 108  Q
    ||||||||||| |||||||||||| || |||| ||| ||   ||| | ||||||| |||||||||||||||||    
T  13300382 cacggacaccgaacacgacacggatactgacataactaataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 19206068 - 19206108
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  19206068 agaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 21826293 - 21826337
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||| ||||| |||| |||||||||||||||||||||    
T  21826293 aaaatcacataactcagtctaataatatgtgtcggtgtcggacac 21826337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 25481922 - 25481966
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||| ||||||||||||    
T  25481922 aaaatcacataattcagtgtaattacaagtgttggtgtcggacac 25481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 30749807 - 30749904
Alignment:
Q  37 acggacaccggacacgacacggacaccg-----acacaaccaaatgtttt-agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||||||||||||     ||||| | || | |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  30749807 acggacaccggacacgacacggacaccgcgtcgacacatctaattttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 30771258 - 30771355
Alignment:
Q  37 acggacaccggacacgacacggacaccg-----acacaaccaaatgtttt-agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||||||||||||     ||||| | || | |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  30771258 acggacaccggacacgacacggacaccgcgtcgacacatctaattttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 52903269 - 52903313
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 52903313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 13436479 - 13436562
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcggtgtcggacac-agggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||||| |||||||||||||||||||||||| ||||||||||||   | ||||| || ||||||||||||||  ||||||||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgtcggacacgtagaacacgactaatccgagaagtgtccgtgcttcatag 13436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 22881705 - 22881611
Alignment:
Q  36 cacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||||| |||||  ||||||||| ||   ||| | ||||||| |||||| |||||||||| | |||||||||||||||||    
T  22881705 cacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 39130812 - 39130761
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacaca 39130761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 39953191 - 39953140
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  39953191 ttttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacaca 39953140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 40181889 - 40181936
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  40181889 agaaaatcacataattcagtgtaattatatgtatcggtgtcggacaca 40181936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 1864921 - 1864875
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  1864921 agaaaatcacataattcagtgtaattatatgtgtcggtgttggacac 1864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 25361867 - 25361945
Alignment:
Q  45 cggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||||| ||||||| ||  |   ||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  25361867 cggacacgacacggacgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 35702676 - 35702540
Alignment:
Q  37 acggacaccggacacgacacggaca--ccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac--aggg 132  Q
    |||||||||||||||||||| ||||  |||||||| | ||   ||| | ||  |||||||||| |||||||||| | ||||| |||||||||||   |||    
T  35702676 acggacaccggacacgacactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacgatggg 35702577  T
Q  133 acacgccttatccgagaagtgtctatgcttcatagtt 169  Q
    |||||||| ||||||| ||||||  ||||||||||||    
T  35702576 acacgcctaatccgaggagtgtccgtgcttcatagtt 35702540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 12242517 - 12242558
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacaca 69  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  12242517 ctatgaagcacggacaccggacacgacacgaacaccgacaca 12242558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 34371731 - 34371772
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 44482248 - 44482289
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 10577830 - 10577730
Alignment:
Q  36 cacggacaccggacacgacacggacaccg--------acacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||||||||||||||||||||||        ||||| | || | ||||||||||||| | ||| ||||||||||||||||||||| | ||||||    
T  10577830 cacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggaca 10577731  T
Q  128 c 128  Q
    |    
T  10577730 c 10577730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 9709838 - 9709884
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||    
T  9709838 agaaaatcacataattcgttgtaattatatgtgtcggtgtcggacac 9709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 14332683 - 14332637
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  14332683 agaaaatcacataatttagtgtaattatatgtctcggtgtcggacac 14332637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 25934592 - 25934671
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||||||||| ||||||    |||||||| | |||| || |||||||||| | ||| ||||||||||||||||||||||    
T  25934592 cacggacaccggacatgacacg----ccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggt 25934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 36878479 - 36878525
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  36878479 agaaaatcacataattcagtgtaattataggtgtcggtgtctgacac 36878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 7918252 - 7918211
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 13997903 - 13997940
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 18337349 - 18337394
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  18337349 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacaca 18337394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 20157391 - 20157350
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 29163421 - 29163376
Alignment:
Q  83 gaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||    
T  29163421 gaaaatcacataattcaatttaattatatgtgtcggtgtcggacac 29163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 5898305 - 5898261
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||||||| ||||||||| |||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgtcagacac 5898261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 25452189 - 25452108
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcat 165  Q
    ||||||||  ||||||||||||||||||  ||||||||||| ||||| || |||||||| || |||| ||||||  ||||||||    
T  25452189 agaaaatctcataattcagtgtaattat--gtgtcggtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 38503338 - 38503378
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  38503338 agaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 51410045 - 51410089
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  51410045 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 51410089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 1486748 - 1486709
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  1486748 aaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 2784574 - 2784621
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||| ||| |||||||||||||||||||| ||||||    
T  2784574 agaaaatcacataattgagtataattatatgtgtcggtgtcagacaca 2784621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 5944303 - 5944342
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  5944303 aaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 9828064 - 9828103
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  9828064 aaaatcacataattcagtgtaattttatgtgtcggtgtcg 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 10233271 - 10233310
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  10233271 agaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 17705626 - 17705584
Alignment:
Q  83 gaaaatcaaataattcagtgtaattatatgtgtcggtgtcggac 126  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtc-gtgtcggac 17705584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 23636090 - 23636043
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| | |||||||||||||||| |||||||||||||| ||||||    
T  23636090 agaaaattacataattcagtgtaattgtatgtgtcggtgtcagacaca 23636043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 48148076 - 48148037
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  48148076 aaaatcatataattcagtgtaattatatatgtcggtgtcg 48148037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 1815271 - 1815321
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||| |||||    
T  1815271 ttttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacac 1815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 2288208 - 2288125
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||| |||||||| |||||||||  |||||||||||||||||  |  ||||||| ||||||| | ||||  ||||||||||    
T  2288208 agaaaatcacataattcaatgtaattat--gtgtcggtgtcggacacctgagcacgcctaatccgaggaatgtcagtgcttcatag 2288125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 12443501 - 12443436
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgag 148  Q
    ||||||||| |||||||||||||||| |||||| | ||||||||||| | ||||| ||| |||||||    
T  12443501 agaaaatcacataattcagtgtaattgtatgtgac-gtgtcggacaccgagacacacctaatccgag 12443436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 18190192 - 18190102
Alignment:
Q  39 ggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||||||||||||||| || |||||| | ||   ||| | ||||| | ||||||||||||||||| | |||||| |||| ||||||    
T  18190192 ggacaccggacacgacacggatactgacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacaca 18190102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 18556428 - 18556382
Alignment:
Q  124 gacacagggacacgccttatccgagaagtgtctatgcttcatagttg 170  Q
    ||||| ||||||||||| ||||||||||||||  |||||||||||||    
T  18556428 gacactgggacacgcctaatccgagaagtgtccgtgcttcatagttg 18556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 37598861 - 37598895
Alignment:
Q  94 aattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| |||||||||||||||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacac 37598895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 38076008 - 38075966
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  38076008 aaatcacataagtcagtgtaatcatatgtgtcggtgtcggaca 38075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 40259002 - 40258928
Alignment:
Q  54 cacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||||||||  ||   ||| | ||||||| ||||||||||||||||| | ||||||||||| |||||    
T  40259002 cacggacaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacac 40258928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 42005068 - 42005026
Alignment:
Q  26 atctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||    
T  42005068 atctatgaagcacggacaccgaacacgacacagacacggacac 42005026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 6427368 - 6427409
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||| ||||||||||||||| |||||||    
T  6427368 agaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 24334736 - 24334664
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||||||||||| | |||||||||||||||||   | ||||||| |||| || ||||||  ||||||||||    
T  24334736 ataattcagtgtaattacaagtgtcggtgtcggacac---gtcacgcctaatccaagtagtgtccgtgcttcatag 24334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 24577274 - 24577186
Alignment:
Q  37 acggacaccggacacgacacggacacc--gacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||| | |||||||||||||||   |||||||| ||   ||| | ||||||| ||||||||||||||||| | ||||||||||||    
T  24577274 acggacactgaacacgacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 25098596 - 25098563
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgt 115  Q
    ||||||||| ||||||||||||||||||||||||    
T  25098596 agaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 25272500 - 25272541
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||| |||||||||||| ||||||||||||    
T  25272500 agaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 19058887 - 19058851
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| | |||||||||||||||||    
T  19058887 ataattcagtgtaattacaagtgtcggtgtcggacac 19058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 19324580 - 19324612
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtg 114  Q
    ||||||||| |||||||||||||||||||||||    
T  19324580 agaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 22515926 - 22515882
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  22515926 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 22515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 24462707 - 24462671
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  24462707 ataattcagtgtaattatatctgtcggtgttggacac 24462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 38078700 - 38078656
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||| |||||||| | |||||||||||||||||    
T  38078700 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacac 38078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 40917707 - 40917747
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    ||||||| |||||||||||||||||||||||| || |||||    
T  40917707 ctatgaaacacggacaccggacacgacacggatactgacac 40917747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 45534179 - 45534131
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcata 166  Q
    ||||| |||| |||||||||||||||||||| ||||| | |||||||||    
T  45534179 gtgtctgacatagggacacgccttatccgaggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 46348422 - 46348378
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  46348422 aaaatcatataatttagtgtaattacaagtgtcggtgtcggacac 46348378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 32426932 - 32426837
Alignment:
Q  60 caccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtc 155  Q
    |||||||||  | |||| ||||||||||||| |||||||| ||||||||| ||||||||||||  |||| |||| |||||||||||||| ||||||    
T  32426932 caccgacacggctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgtctaacacggggatacgccttatccgaggagtgtc 32426837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 167
Target Start/End: Original strand, 6247642 - 6247729
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac----agggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||     ||||||| ||| ||||||||||||||| ||||||||||    
T  6247642 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacgggacacacctaatccgagaagtgtctgtgcttcatag 6247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 6401462 - 6401557
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac--------aaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||| ||||||||||||||||||        ||| |||| ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  6401462 cacggacaccggacgcgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcg 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 21814231 - 21814320
Alignment:
Q  36 cacggacaccggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||| |||||| ||||||  ||||||| | || | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  21814231 cacggacaccggaaacgacatggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 39758266 - 39758327
Alignment:
Q  58 gacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||| |||||| | |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  39758266 gacacggacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 19453153 - 19453066
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||||| |||||| |||||||||||   |||| ||||||||||||| | |||  |  ||||||||||||||||||||||    
T  19453153 cacggacaccggacatgacacgaacaccgacacagttaaattttttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcg 19453066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 26312787 - 26312833
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  26312787 agaaaatcaattaattcagtgtaattatatgtatcggtgtcggacac 26312833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 28588715 - 28588669
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  28588715 agaaaatcacataattcagtgtaattataggtgtcggtgtcggacac 28588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 30502429 - 30502383
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  30502429 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 30542772 - 30542726
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  30542772 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 6326338 - 6326253
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||| | ||||||||||||||||| | ||||| | ||||||||| || |||||||| || |||||||||||  ||||||||||    
T  6326338 agaaaattacataattcagtgtaattacaagtgtcagcgtcggacaccggaacacgcctaattcgagaagtgtccgtgcttcatag 6326253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 30099120 - 30099036
Alignment:
Q  43 accggacacgacacggacac--cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    |||||||||||||  |||||  ||||||||| |||| ||||| | ||||  ||||||| ||||||||||||||||||||||||||    
T  30099120 accggacacgacatagacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtcgga 30099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 42029767 - 42029816
Alignment:
Q  79 tttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  42029767 tttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacac 42029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 6471969 - 6471889
Alignment:
Q  43 accggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||| ||||||||||| |||||  | ||   ||| ||||||||| |||||||||||||||||||||||| |||||||    
T  6471969 accggacatgacacggacactgacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 18421882 - 18421836
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||    
T  18421882 agaaaatcacataatccagtgtaattatatgtgtcggcgtcggacac 18421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 34879368 - 34879414
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  34879368 agaaaatcatataattcagtgtaataatatgtgtcgatgtcggacac 34879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 3966521 - 3966562
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| | ||||||||||||||||||||||||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 16203836 - 16203791
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||    
T  16203836 agaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 21191095 - 21191050
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  21191095 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacaca 21191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 41091298 - 41091257
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 15884008 - 15884052
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 15884052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 21137645 - 21137685
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  21137645 ctatgaagcacggacaccggacacaacacggacactgacac 21137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 43564901 - 43564945
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacac 43564945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 2548405 - 2548451
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| | ||||||||||||||| ||| |||||||||||||||||    
T  2548405 agaaaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 17925213 - 17925167
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  17925213 agaaaatcacataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 23012449 - 23012403
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||| | ||||||||||||||||||||| ||||||    
T  23012449 agaaaatcatataatttaatgtaattatatgtgtcggtgttggacac 23012403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 33178045 - 33178090
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||| |||||| |||||||||| | ||||||||||||||||||    
T  33178045 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacaca 33178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 36838561 - 36838602
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | |||||| |||||||||||||||||||||||||    
T  36838561 agaaaattacataatttagtgtaattatatgtgtcggtgtcg 36838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 14422922 - 14422966
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||||| || ||| ||||||||||    
T  14422922 aaaatcacataattcagtgtaattataagtttcgatgtcggacac 14422966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 14873535 - 14873575
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    |||||| || |||||| ||||||||||||||||||||||||    
T  14873535 agaaaagcacataatttagtgtaattatatgtgtcggtgtc 14873575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 19429491 - 19429547
Alignment:
Q  112 gtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagt 168  Q
    ||||||||||| ||||| ||| |||| || |||| |||||||||| |||||||||||    
T  19429491 gtgtcggtgtctgacaccgggtcacgtctaatccaagaagtgtctgtgcttcatagt 19429547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 21576784 - 21576740
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||| ||||||||||    
T  21576784 aaaatcacataattcagtgtaattacaagtgtcgatgtcggacac 21576740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 23016086 - 23016054
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||| |||||||||||||||||||||||||    
T  23016086 cacggactccggacacgacacggacaccgacac 23016054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 24273071 - 24273039
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtg 114  Q
    ||||||||| |||||||||||||||||||||||    
T  24273071 agaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 24389143 - 24389175
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtg 114  Q
    ||||||||| |||||||||||||||||||||||    
T  24389143 agaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 17425430 - 17425348
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcata 166  Q
    ||||||||  |||||||||||||||  |||||||| ||||| |||||| |||||||||| ||||||| ||||||| |||||||||    
T  17425430 agaaaatcgcataattcagtgtaat--tatgtgtctgtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 16189727 - 16189813
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca---gggacacgccttatccgagaagtgtctatgcttcat 165  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||   |||||| | || ||| |||||||||| |||||||||    
T  16189727 agaaaatcacataattcagtgtaattatgtgtgtcggtgacggacacagccgggacatggctaatctgagaagtgtccatgcttcat 16189813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 22440641 - 22440559
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcat 165  Q
    ||||||||| ||||||||||||||||||||||| | ||||| |||||  |||||||||| ||||||| ||||||  ||||||||    
T  22440641 agaaaatcacataattcagtgtaattatatgtgac-gtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 127
Target Start/End: Original strand, 9996813 - 9996903
Alignment:
Q  37 acggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||| ||||||||| |||||||||||   |||   ||| ||||||||| |||||||||| ||||||||||| |||||||| ||||    
T  9996813 acggacaccgaacacgacacagacaccgacactgacaataatttgagaaaatcacataattcagtataattatatgtctcggtgtcagaca 9996903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 40179675 - 40179631
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||    
T  40179675 aaaatcacataattcagtgtaattatatgcgtcggtgtcggacac 40179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 46084063 - 46083991
Alignment:
Q  52 gacacggacaccg-acacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||| ||||| | || |||||||| |||||| |||||  |||||||||||||||||||||||||    
T  46084063 gacacggacaccggacacagctaattgttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcg 46083991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 54580062 - 54580018
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  54580062 aaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 8423759 - 8423713
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||    
T  8423759 agaaaatcacataattcagtgtaattataaatgtcggtgtcggacac 8423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 10499311 - 10499227
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||| | |  |||||||| ||||||| | ||||  ||||||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtgtcagtgtcggac-ccgacacacgcctaatccgaggattgtccgtgcttcatag 10499227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 26504340 - 26504303
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26504340 agaaaatcaaatagttcagtgtaattatatgtgtcggt 26504303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 44132689 - 44132644
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||    
T  44132689 ttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcg 44132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 4157122 - 4157213
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||| |||||||||| ||||| |||||||| ||   ||| | ||||||| |||||| |||| ||||| | |||||||||||||||||    
T  4157122 cacggacaccagacacgacacagacactgacacaactaataatttga-aaaatcacataatttagtgcaattacaagtgtcggtgtcggacac 4157213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 5775399 - 5775359
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  5775399 agaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12797377 - 12797333
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 12797333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 118
Target Start/End: Original strand, 40613468 - 40613504
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcgg 118  Q
    ||||||||| |||||||||||||||||||||||||||    
T  40613468 agaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 42640549 - 42640593
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 42640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 49431046 - 49431090
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  49431046 aaaatcacataattcagtgtaattaaaagtgtcggtgtcggacac 49431090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 5414264 - 5414172
Alignment:
Q  39 ggacaccggacacgacacggacac--------cgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||||||||||||||        ||||||| | || | ||||||||||||| | ||| |||||||||||||||| |||||||||    
T  5414264 ggacaccggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcg 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 22234929 - 22234890
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  22234929 aaaatcacataattcagtgtaattctatgtgtcggtgtcg 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 8402783 - 8402737
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||||||||||||||||| || ||||| |||||    
T  8402783 agaaaatcatataattcagtgtaattatatgtctcagtgtcagacac 8402737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 20950456 - 20950422
Alignment:
Q  94 aattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||||||||||||| |||||    
T  20950456 aattcagtgtaattatatgtgtcggtgtcagacac 20950422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 30094066 - 30094112
Alignment:
Q  101 tgtaattatatgtgtcggtgtcggacacagggacacgccttatccga 147  Q
    |||||||| | ||||||||||||||||| ||||||||||| ||||||    
T  30094066 tgtaattacaagtgtcggtgtcggacaccgggacacgcctaatccga 30094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 7970537 - 7970578
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||||||||||||||||||| | |||||||    
T  7970537 agaaaatcatataattcagtgtaattatatgttttggtgtcg 7970578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 13134468 - 13134509
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||| ||||||||||||||||||| |||||    
T  13134468 agaaaatcacataatttagtgtaattatatgtgtcgatgtcg 13134509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 15029788 - 15029825
Alignment:
Q  87 atcaaataattcagtgtaattatatgtgtcggtgtcgg 124  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  15029788 atcacataattcagtgtaattatatgtgttggtgtcgg 15029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 19097939 - 19097894
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||  ||||||||| ||||||||| |||||||||||    
T  19097939 ttttagaaaatcacgtaattcagtataattatatttgtcggtgtcg 19097894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 28964231 - 28964186
Alignment:
Q  124 gacacagggacacgccttatccgagaagtgtctatgcttcatagtt 169  Q
    ||||| ||||||||||| ||||||| |||||| |||||||||||||    
T  28964231 gacactgggacacgcctaatccgaggagtgtccatgcttcatagtt 28964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 30982919 - 30982878
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||    
T  30982919 agaaaatcacatatttcagtgtaattataagtgtcggtgtcg 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 36635342 - 36635375
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgt 115  Q
    ||||||||| ||||||||||||||||||||||||    
T  36635342 agaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 42014989 - 42015022
Alignment:
Q  94 aattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    |||||||||||||||||||||| |||||||||||    
T  42014989 aattcagtgtaattatatgtgttggtgtcggaca 42015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 46160914 - 46160955
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| | |||||||||||| |||||||||||||||||||    
T  46160914 agaaaataacataattcagtgttattatatgtgtcggtgtcg 46160955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 482269 - 482233
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||||||||||  ||||||||||||||||    
T  482269 ataattcagtgtaattataactgtcggtgtcggacac 482233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 715593 - 715545
Alignment:
Q  119 tgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||| ||||||||||||||||| ||||||| ||||||  ||||||||||    
T  715593 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 752919 - 752871
Alignment:
Q  119 tgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||| ||||||||||||||||| ||||||| ||||||  ||||||||||    
T  752919 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 6879504 - 6879460
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  6879504 aaaatcacataattaagtgtaattacaagtgtcggtgtcggacac 6879460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 12895313 - 12895269
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||  ||||||||||| |||||||||||||||||    
T  12895313 aaaatcacataattttgtgtaattataagtgtcggtgtcggacac 12895269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 16073422 - 16073458
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| | |||||||||||||||||    
T  16073422 ataattcagtgtaattacaagtgtcggtgtcggacac 16073458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 18576078 - 18576038
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  18576078 agaaaatcacataattcggtgtaattatatgtgttggtgtc 18576038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21945458 - 21945498
Alignment:
Q  27 tctatgaagcacggacaccggacacgacacggacaccgaca 67  Q
    |||||||||||||||||||||||| ||||| ||||| ||||    
T  21945458 tctatgaagcacggacaccggacatgacacagacactgaca 21945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 23293025 - 23292981
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||    
T  23293025 aaaatcacataattcagtataattacaagtgtcggtgtcggacac 23292981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 24343471 - 24343503
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||| |||||||    
T  24343471 cacggacaccggacacgacacggacgccgacac 24343503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 28964287 - 28964243
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | ||||| |||||||||||    
T  28964287 aaaatcacataattcagtgtaattacaagtgtctgtgtcggacac 28964243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 29205464 - 29205508
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||| ||||||    
T  29205464 aaaatcacataattcagtgtaattacaagtgtcggtgttggacac 29205508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 35158024 - 35157980
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||||| ||||||||||| |||||    
T  35158024 aaaatcacataatttagtgtaattataagtgtcggtgtctgacac 35157980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 17735 - 17834
Alignment:
Q  28 ctatgaagcacggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||||| || || |||||||||||||||||||||||||| |  | ||| ||||||||| | || || |||||||| |||||||||||||| ||||    
T  17735 ctatgaagcacagatac-ggacacgacacggacaccgacacaactagttttttaagaaaatcacacaactcggtgtaattgtatgtgtcggtgtcagaca 17833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 4786379 - 4786336
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4786379 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgga 4786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 34897103 - 34897150
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34897103 agaaaatcacataattcagtgtaattatatgtgtcgatgtcggacaca 34897150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 13844637 - 13844591
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  13844637 agaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 26902217 - 26902175
Alignment:
Q  81 tagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 3951624 - 3951531
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaaccaaatgttt-tagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||| || |||||||||||||||||||| | |||| |||  | ||||||| | ||| ||||||| ||||||||||||||||| |||||    
T  3951624 cacggacaccagatacgacacggacaccgacacagctaaatttttaaaaaaaatcacaaaatgcagtgtacttatatgtgtcggtgtcagacac 3951531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 11833893 - 11833969
Alignment:
Q  95 attcagtgtaattatatgtgtcggtgtcggacacagg----gacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||||||||||||||||||| ||||||||||||| |     |||||||| ||||||| ||||||| ||||||||||    
T  11833893 attcagtgtaattatatgtgttggtgtcggacacatgtaattacacgcctaatccgaggagtgtctgtgcttcatag 11833969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 11927125 - 11927086
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 121
Target Start/End: Original strand, 18964191 - 18964234
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  18964191 ttttagaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 27213565 - 27213649
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatagttgaa 172  Q
    ||||||||| |||||||| |||||||||||||||      ||||||| |||||||| || ||||||||||||||  |||||||||| ||||    
T  27213565 agaaaatcacataattcactgtaattatatgtgt------cggacaccgggacacggctaatccgagaagtgtccgtgcttcataggtgaa 27213649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 43737908 - 43737806
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacacaacc----------aaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcgga 125  Q
    ||||||||||||||||||||||||||||||||||  |          |||| || | |||||||| | ||| ||||||||||||||||||||||||||||    
T  43737908 cacggacaccggacacgacacggacaccgacacacgccggcacagctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgga 43737809  T
Q  126 cac 128  Q
    |||    
T  43737808 cac 43737806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 3025569 - 3025615
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  3025569 agaaaatcacataattcagtgtaattataggtgtcagtgtcggacac 3025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  85 aaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 28747480 - 28747430
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||| |||  ||| ||||||||||||||||||||||||||||    
T  28747480 ttttagaaaatcagatagctcaatgtaattatatgtgtcggtgtcggacac 28747430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 31236618 - 31236572
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||    
T  31236618 agaaaatcacataattcaatgtaattatatgtgtcggtgacggacac 31236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 33405425 - 33405379
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||| || |||||| ||||||||||||||||||||||||||||||    
T  33405425 agaaaaacacataatttagtgtaattatatgtgtcggtgtcggacac 33405379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 12606870 - 12606825
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||    
T  12606870 agaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca 12606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 4948672 - 4948716
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||    
T  4948672 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 4948716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 14134717 - 14134757
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  14134717 agaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 25566817 - 25566949
Alignment:
Q  40 gacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtc-----ggacacagggac 134  Q
    ||||||||||| ||||| ||||| |||||| | ||   ||| | ||||||| ||||||||||||||||| | |||||||||||     ||   | |||||    
T  25566817 gacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtccgggac 25566916  T
Q  135 acgccttatccgagaagtgtctatgcttcatag 167  Q
    |||||| ||||||| ||||||| ||||||||||    
T  25566917 acgcctaatccgaggagtgtctgtgcttcatag 25566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 11803277 - 11803316
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgt 121  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  11803277 agaaaatcacataattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 11944685 - 11944724
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| |||| |||||||||||||||||||||||||||    
T  11944685 aaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 12985410 - 12985457
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||||| |||||| |||| |||||||||||||||||    
T  12985410 agaaaatcacataattcaatgtaatcatatatgtcggtgtcggacaca 12985457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 128
Target Start/End: Original strand, 40332170 - 40332255
Alignment:
Q  37 acggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    |||||||||||||||||||||||||| |   |||  ||   ||| ||||||||| ||||||||||||||||| | |||||||||| ||||||    
T  40332170 acggacaccggacacgacacggacactg---caaataa---tttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacac 40332255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 16642060 - 16641974
Alignment:
Q  37 acggacaccggacacgacacggacaccgacacaaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||| ||||||||||||| ||||| |||||||| ||   ||| |||||  || |||||| |||||  ||||||||||||||||||    
T  16642060 acggacgccggacacgacacagacactgacacaactaataatttgagaaatacacataatttagtgtcgttatatgtgtcggtgtcg 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 28385025 - 28384995
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtc 122  Q
    |||||||||||||||||||||||||||||||    
T  28385025 ataattcagtgtaattatatgtgtcggtgtc 28384995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 38079017 - 38079063
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||| || |||||||||||||||||| |||| ||||||||||    
T  38079017 agaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacac 38079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 122
Target Start/End: Original strand, 8293854 - 8293883
Alignment:
Q  93 taattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||||||||||||||||||||||||    
T  8293854 taattcagtgtaattatatgtgtcggtgtc 8293883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 31109559 - 31109514
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggaca 127  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||||    
T  31109559 agaaaatcaaacaattcagtctaactatatgtgtcagtgtcggaca 31109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 34451082 - 34451037
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||| |||||||| | ||| ||||||||||||||||||||||||||    
T  34451082 tttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 34451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 926883 - 926851
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  926883 cacggacaccggacacgacacggacactgacac 926851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 20679436 - 20679396
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||||| ||| ||||||||||||||| |||||||||||    
T  20679436 agaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 20873089 - 20873133
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  20873089 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 20873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 24613540 - 24613584
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| |||||| |||||||||| | |||||||||||||||||    
T  24613540 aaaatcacataattaagtgtaattacaagtgtcggtgtcggacac 24613584  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 31580168 - 31580124
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggac 126  Q
    ||||||||| |||||| |||||||||||| |||||| ||||||||    
T  31580168 agaaaatcacataattgagtgtaattataggtgtcgatgtcggac 31580124  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 33382060 - 33382020
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtc 122  Q
    ||||||| | ||||||||| |||||||||||||||||||||    
T  33382060 agaaaatgacataattcagagtaattatatgtgtcggtgtc 33382020  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 241548 - 241590
Alignment:
Q  26 atctatgaagcacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  241548 atctatgaagcacggacaccggacacgacacggacactgacac 241590  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 241675 - 241724
Alignment:
Q  118 gtgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    ||||| ||||| ||||||||||| ||||||||||||||  ||||||||||    
T  241675 gtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0116 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 9862 - 9957
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac--------aaccaaatgttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||||||||||||| ||||||||||||        | | || | ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  9862 cacggacaccggacacgacatggacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 6041 - 5996
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||    
T  6041 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 5996  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 44566 - 44529
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggt 119  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  44566 agaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 9788 - 9747
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  9788 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 135353 - 135312
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 70306 - 70342
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||||| |||||||||||||||||    
T  70306 ataattcagtgtaattataagtgtcggtgtcggacac 70342  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 23440 - 23479
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcg 23479  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 90861 - 90908
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcggacaca 129  Q
    ||||||||| |||||||||||||||||||| ||||| |||| ||||||    
T  90861 agaaaatcatataattcagtgtaattatatatgtcgatgtcagacaca 90908  T

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Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 99907 - 99952
Alignment:
Q  78 ttttagaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||||| | |||||||| ||||||||||||||| |||||||    
T  99907 ttttagaaaataacataattcaatgtaattatatgtgttggtgtcg 99952  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 8761 - 8795
Alignment:
Q  132 gacacgccttatccgagaagtgtctatgcttcata 166  Q
    |||||||||||||||||||||||| ||||||||||    
T  8761 gacacgccttatccgagaagtgtccatgcttcata 8795  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 53198 - 53236
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtg 120  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  53198 agaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 25809 - 25768
Alignment:
Q  82 agaaaatcaaataattcagtgtaattatatgtgtcggtgtcg 123  Q
    ||||||||| |||||| |||||||||||| ||||||||||||    
T  25809 agaaaatcacataatttagtgtaattataagtgtcggtgtcg 25768  T

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Target: scaffold0793 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 4869 - 4821
Alignment:
Q  119 tgtcggacacagggacacgccttatccgagaagtgtctatgcttcatag 167  Q
    |||| ||||||||||||||||| ||||||| ||||||  ||||||||||    
T  4869 tgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 501 - 457
Alignment:
Q  84 aaaatcaaataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||| | ||||||||||||||| | |||||||||||||||||    
T  501 aaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacac 457  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 15047 - 15095
Alignment:
Q  124 gacacagggacacgccttatccgagaagtgtctatgcttcatagttgaa 172  Q
    ||||| ||||||||||||||||||| ||||| | |||||||||| ||||    
T  15047 gacacggggacacgccttatccgaggagtgtttgtgcttcatagatgaa 15095  T

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Target: scaffold0083 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 45561 - 45525
Alignment:
Q  92 ataattcagtgtaattatatgtgtcggtgtcggacac 128  Q
    ||||||||||||||||| | |||||||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacac 45525  T

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Target: scaffold0053 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 8762 - 8794
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  8762 cacggacaccggacacgacacggacactgacac 8794  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 225363 - 225331
Alignment:
Q  36 cacggacaccggacacgacacggacaccgacac 68  Q
    ||||||||||||||||||||||||||| |||||    
T  225363 cacggacaccggacacgacacggacactgacac 225331  T

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