View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17077_low_2 (Length: 571)
Name: NF17077_low_2
Description: NF17077
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17077_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 17 - 561
Target Start/End: Complemental strand, 35856074 - 35855512
Alignment:
| Q |
17 |
attttataccaaattccaatcacagctatctcttctttagaattttgatggacacaatgttgttccatatcaaacctagataaaaattacatgacattat |
116 |
Q |
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| T |
35856074 |
attttataccaaattccaatcacagctatctcgtctttagaattttgatggacacaatgttgttccatatcaaacctagataaaaattacatgacattat |
35855975 |
T |
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| Q |
117 |
tattatta------atacatacatacaaatagcaaataaattattat--------gcttat--------atcttaagaacttatactcactttgatccat |
194 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||| |
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| T |
35855974 |
tattattattaataatacatacatacaaatagcaaataaattattaaaagggtgagtttatttatgcttatcttaagaacttatacccactttgatccat |
35855875 |
T |
|
| Q |
195 |
tcaatgtgtgctctgaaggtgtatgccaatgacattgtattagtttgtagtaagttccatttagattaagcttacctgcataacctttccattggagctg |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35855874 |
tcaatgtgtgctctgaaggtgtatgccaatgacattgtattagtttgtagtaagttccatttagattaagcttacctgcataacctttccattggagctg |
35855775 |
T |
|
| Q |
295 |
tcgaaacattaagtacgtacgtatattagtctccttaagcaaaatgtgtatttataattgtttaattaaaaatgcacttagtggcttaccatgacatcat |
394 |
Q |
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||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35855774 |
tcgaaacattaagcacgta----tattagtctccttaagcaaaatgtgtatttataattgtttaattaaaaatgcacttagtggcttaccatgacatcat |
35855679 |
T |
|
| Q |
395 |
taaacctattctttaggaaagcaggacctagtttgtaatctttttcaagtttaccaagttgaggaagttcttgcacccttttgtttaggatatcaattgg |
494 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35855678 |
taaacctattctttaggaaagcaggacctagtttgtaatctttttcaagtttaccaagttgaggaagttcttgcacccttttgtttaggatatcaattgg |
35855579 |
T |
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| Q |
495 |
agattgtaattttccattcccacaaagtttccattctggtttcagattcccccaattctctgctcct |
561 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
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| T |
35855578 |
agattgtaattttccattcccacaaagtttccattctggtttcagattcccccagttctctggtcct |
35855512 |
T |
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