View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17078_low_4 (Length: 282)

Name: NF17078_low_4
Description: NF17078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17078_low_4
NF17078_low_4
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-75)||(89593-89657)
[»] chr3 (48 HSPs)
chr3 (9-68)||(34327587-34327646)
chr3 (11-68)||(41254012-41254069)
chr3 (11-59)||(20625250-20625298)
chr3 (1-61)||(23444344-23444404)
chr3 (1-68)||(331869-331936)
chr3 (6-68)||(7882283-7882345)
chr3 (11-69)||(24694229-24694287)
chr3 (11-68)||(27224582-27224639)
chr3 (11-68)||(48191717-48191774)
chr3 (9-65)||(3020619-3020675)
chr3 (11-59)||(54595801-54595849)
chr3 (9-68)||(7826802-7826861)
chr3 (12-59)||(51060745-51060792)
chr3 (10-68)||(24694308-24694366)
chr3 (15-65)||(38893231-38893281)
chr3 (11-68)||(21217168-21217225)
chr3 (11-76)||(40639876-40639941)
chr3 (11-68)||(41253933-41253990)
chr3 (14-59)||(42929090-42929135)
chr3 (11-68)||(52215961-52216018)
chr3 (11-59)||(24722698-24722746)
chr3 (11-59)||(30519679-30519727)
chr3 (16-56)||(40202469-40202509)
chr3 (11-59)||(54783388-54783436)
chr3 (9-68)||(7823946-7824005)
chr3 (11-78)||(8504931-8504998)
chr3 (4-63)||(10841771-10841830)
chr3 (4-59)||(41743601-41743656)
chr3 (11-58)||(51253682-51253729)
chr3 (4-63)||(52461505-52461563)
chr3 (10-68)||(7829123-7829181)
chr3 (1-59)||(11472259-11472317)
chr3 (11-45)||(29222828-29222862)
chr3 (4-66)||(39579567-39579629)
chr3 (11-64)||(7823873-7823926)
chr3 (15-68)||(24075449-24075502)
chr3 (11-68)||(35511852-35511909)
chr3 (11-68)||(40639790-40639847)
chr3 (14-75)||(43177083-43177144)
chr3 (4-77)||(44382886-44382959)
chr3 (11-56)||(50744980-50745025)
chr3 (1-54)||(52866488-52866541)
chr3 (11-59)||(10872683-10872731)
chr3 (11-59)||(12744982-12745030)
chr3 (11-59)||(22496962-22497010)
chr3 (29-61)||(27601252-27601284)
chr3 (11-63)||(29241561-29241613)
chr3 (11-59)||(37897763-37897811)
[»] chr4 (55 HSPs)
chr4 (1-79)||(2865039-2865117)
chr4 (1-59)||(36786161-36786219)
chr4 (4-77)||(34616289-34616362)
chr4 (4-68)||(2582810-2582874)
chr4 (11-75)||(25022513-25022577)
chr4 (6-59)||(21142101-21142154)
chr4 (11-68)||(39160895-39160952)
chr4 (1-50)||(39533776-39533825)
chr4 (24-68)||(483981-484025)
chr4 (11-59)||(34616226-34616274)
chr4 (11-63)||(39533837-39533889)
chr4 (29-76)||(12672441-12672488)
chr4 (9-68)||(40575841-40575900)
chr4 (11-65)||(22493657-22493711)
chr4 (6-68)||(23568456-23568518)
chr4 (11-49)||(39235158-39235196)
chr4 (1-55)||(52914013-52914067)
chr4 (11-68)||(2253956-2254013)
chr4 (9-66)||(12912613-12912670)
chr4 (4-69)||(16170984-16171049)
chr4 (4-77)||(41654493-41654566)
chr4 (11-68)||(46803489-46803546)
chr4 (9-66)||(47308118-47308175)
chr4 (19-68)||(48603679-48603728)
chr4 (11-63)||(24156220-24156272)
chr4 (15-75)||(40952343-40952403)
chr4 (11-59)||(55936068-55936116)
chr4 (1-68)||(14450959-14451026)
chr4 (12-63)||(27537063-27537114)
chr4 (4-59)||(38382050-38382105)
chr4 (4-59)||(47181633-47181688)
chr4 (4-59)||(48402422-48402477)
chr4 (4-59)||(56364337-56364392)
chr4 (9-59)||(1829626-1829676)
chr4 (11-77)||(4406234-4406300)
chr4 (9-59)||(21113071-21113121)
chr4 (11-65)||(32599561-32599615)
chr4 (15-57)||(40814754-40814796)
chr4 (6-64)||(43616221-43616279)
chr4 (13-59)||(44549315-44549361)
chr4 (6-68)||(55934642-55934704)
chr4 (30-75)||(484034-484079)
chr4 (4-61)||(23003971-23004028)
chr4 (18-59)||(32588115-32588156)
chr4 (15-76)||(34937095-34937156)
chr4 (11-68)||(38381978-38382035)
chr4 (11-68)||(47181561-47181618)
chr4 (11-68)||(53176310-53176367)
chr4 (10-63)||(54931899-54931952)
chr4 (11-68)||(56364407-56364464)
chr4 (4-68)||(6975007-6975071)
chr4 (11-59)||(12672526-12672574)
chr4 (11-75)||(24448746-24448809)
chr4 (11-59)||(48402492-48402540)
chr4 (11-59)||(52914079-52914127)
[»] chr7 (26 HSPs)
chr7 (11-68)||(7295137-7295194)
chr7 (8-59)||(23818435-23818486)
chr7 (11-68)||(25245224-25245281)
chr7 (11-59)||(2943223-2943271)
chr7 (11-59)||(21586825-21586873)
chr7 (11-79)||(43103063-43103131)
chr7 (8-76)||(43130227-43130295)
chr7 (9-59)||(4089140-4089190)
chr7 (6-68)||(5950270-5950332)
chr7 (11-68)||(7701190-7701247)
chr7 (11-68)||(10095721-10095778)
chr7 (4-59)||(7701262-7701317)
chr7 (4-59)||(12088822-12088877)
chr7 (17-59)||(13797667-13797709)
chr7 (1-59)||(31115620-31115678)
chr7 (12-54)||(45914483-45914525)
chr7 (11-68)||(8127908-8127965)
chr7 (11-68)||(9555341-9555398)
chr7 (18-59)||(27330517-27330558)
chr7 (3-68)||(31813413-31813478)
chr7 (11-68)||(41404017-41404074)
chr7 (11-68)||(46022629-46022686)
chr7 (8-68)||(9930390-9930450)
chr7 (11-63)||(29168370-29168422)
chr7 (13-57)||(30138801-30138845)
chr7 (11-59)||(31115690-31115738)
[»] chr6 (23 HSPs)
chr6 (4-77)||(31996573-31996646)
chr6 (12-57)||(10258317-10258362)
chr6 (11-59)||(34170089-34170137)
chr6 (11-69)||(12104746-12104804)
chr6 (11-77)||(15517171-15517237)
chr6 (11-64)||(29419868-29419921)
chr6 (11-59)||(34379816-34379864)
chr6 (1-68)||(26527192-26527259)
chr6 (11-54)||(29072084-29072127)
chr6 (11-54)||(29104657-29104700)
chr6 (1-59)||(12104816-12104874)
chr6 (11-68)||(16121046-16121103)
chr6 (11-68)||(26527271-26527328)
chr6 (9-69)||(1875044-1875104)
chr6 (6-58)||(14218209-14218261)
chr6 (4-68)||(33689303-33689366)
chr6 (1-68)||(32254892-32254959)
chr6 (1-59)||(28555018-28555076)
chr6 (9-59)||(31714546-31714596)
chr6 (11-68)||(16199122-16199179)
chr6 (11-59)||(3203752-3203800)
chr6 (15-59)||(12218456-12218500)
chr6 (9-61)||(12480081-12480133)
[»] chr5 (22 HSPs)
chr5 (11-70)||(4297278-4297337)
chr5 (9-75)||(4967709-4967775)
chr5 (11-63)||(7505177-7505229)
chr5 (4-68)||(10437711-10437775)
chr5 (11-59)||(18652846-18652894)
chr5 (4-60)||(41005678-41005734)
chr5 (4-76)||(31963513-31963585)
chr5 (4-65)||(17625714-17625775)
chr5 (11-64)||(32397977-32398030)
chr5 (4-64)||(3100411-3100471)
chr5 (8-68)||(15549403-15549463)
chr5 (11-63)||(25941667-25941719)
chr5 (11-63)||(30371340-30371392)
chr5 (4-63)||(32911476-32911536)
chr5 (11-59)||(37067623-37067671)
chr5 (14-66)||(43438339-43438391)
chr5 (1-56)||(11795750-11795805)
chr5 (13-68)||(14772550-14772605)
chr5 (16-59)||(26045305-26045348)
chr5 (2-59)||(37067837-37067894)
chr5 (15-71)||(11795821-11795877)
chr5 (4-68)||(22227055-22227119)
[»] scaffold0065 (2 HSPs)
scaffold0065 (11-61)||(36935-36985)
scaffold0065 (4-62)||(39183-39241)
[»] chr2 (48 HSPs)
chr2 (18-68)||(5529235-5529285)
chr2 (1-68)||(27497338-27497404)
chr2 (29-75)||(36001776-36001822)
chr2 (4-61)||(3098135-3098192)
chr2 (6-59)||(13882759-13882812)
chr2 (11-68)||(23378023-23378080)
chr2 (11-64)||(33555258-33555311)
chr2 (11-59)||(1961390-1961438)
chr2 (11-59)||(31024182-31024230)
chr2 (11-63)||(38181767-38181819)
chr2 (1-68)||(27331830-27331897)
chr2 (4-59)||(32630480-32630535)
chr2 (9-59)||(596106-596156)
chr2 (11-69)||(13333528-13333586)
chr2 (11-57)||(21183408-21183454)
chr2 (1-63)||(32630413-32630475)
chr2 (11-77)||(38465782-38465848)
chr2 (11-76)||(2050171-2050236)
chr2 (11-68)||(3098207-3098264)
chr2 (11-68)||(3121424-3121481)
chr2 (14-67)||(6648171-6648224)
chr2 (6-59)||(14022884-14022937)
chr2 (11-68)||(25270937-25270994)
chr2 (19-60)||(34893786-34893827)
chr2 (11-59)||(11726576-11726624)
chr2 (11-59)||(15119788-15119836)
chr2 (11-59)||(41056969-41057017)
chr2 (1-68)||(1961311-1961378)
chr2 (9-68)||(11342049-11342108)
chr2 (6-65)||(13333452-13333511)
chr2 (1-68)||(15119848-15119915)
chr2 (4-59)||(15916744-15916799)
chr2 (4-59)||(25270867-25270922)
chr2 (6-68)||(8510581-8510643)
chr2 (1-79)||(10996237-10996315)
chr2 (6-68)||(13994266-13994327)
chr2 (1-55)||(37182831-37182885)
chr2 (15-68)||(7079372-7079425)
chr2 (11-68)||(31102030-31102087)
chr2 (4-65)||(41056893-41056954)
chr2 (11-68)||(45473079-45473136)
chr2 (11-55)||(2544432-2544476)
chr2 (11-59)||(4563945-4563993)
chr2 (6-42)||(13988368-13988404)
chr2 (6-58)||(26003447-26003499)
chr2 (1-57)||(26003506-26003562)
chr2 (11-59)||(36547352-36547400)
chr2 (13-49)||(43701375-43701411)
[»] chr1 (28 HSPs)
chr1 (11-68)||(50550200-50550257)
chr1 (11-63)||(33765868-33765920)
chr1 (4-63)||(37589671-37589730)
chr1 (11-69)||(6156635-6156693)
chr1 (6-68)||(28038903-28038965)
chr1 (11-64)||(14967306-14967359)
chr1 (11-68)||(24981922-24981979)
chr1 (6-57)||(46494993-46495044)
chr1 (6-68)||(23398421-23398483)
chr1 (1-59)||(41007748-41007806)
chr1 (11-56)||(39362890-39362935)
chr1 (11-75)||(3549860-3549924)
chr1 (9-68)||(3013689-3013748)
chr1 (1-59)||(25547482-25547540)
chr1 (16-61)||(22558949-22558994)
chr1 (4-77)||(24981834-24981907)
chr1 (15-68)||(46412705-46412758)
chr1 (11-68)||(46906863-46906920)
chr1 (4-57)||(46906935-46906988)
chr1 (11-68)||(50308709-50308766)
chr1 (15-63)||(8396997-8397045)
chr1 (11-63)||(8466007-8466059)
chr1 (19-67)||(10831082-10831130)
chr1 (1-77)||(11324504-11324580)
chr1 (1-77)||(11482525-11482601)
chr1 (13-65)||(27068785-27068837)
chr1 (4-68)||(29043456-29043520)
chr1 (11-59)||(34953907-34953955)
[»] chr8 (32 HSPs)
chr8 (11-63)||(7484698-7484750)
chr8 (4-71)||(9930950-9931017)
chr8 (1-76)||(11295658-11295733)
chr8 (11-68)||(10934684-10934741)
chr8 (4-76)||(92752-92824)
chr8 (4-68)||(2296476-2296540)
chr8 (15-59)||(10335227-10335271)
chr8 (4-59)||(6189708-6189763)
chr8 (1-48)||(13080110-13080157)
chr8 (1-68)||(27518386-27518453)
chr8 (11-68)||(27502903-27502960)
chr8 (4-77)||(44319603-44319676)
chr8 (11-63)||(17871770-17871822)
chr8 (4-68)||(17986268-17986332)
chr8 (11-59)||(24017799-24017847)
chr8 (15-63)||(25267982-25268030)
chr8 (1-65)||(45045448-45045512)
chr8 (1-68)||(24471186-24471253)
chr8 (11-66)||(24842088-24842143)
chr8 (11-77)||(3225861-3225927)
chr8 (14-56)||(11295748-11295790)
chr8 (1-63)||(13080159-13080221)
chr8 (11-65)||(18603539-18603593)
chr8 (1-63)||(27502972-27503034)
chr8 (29-63)||(44098999-44099033)
chr8 (15-68)||(44319523-44319576)
chr8 (11-59)||(5888347-5888395)
chr8 (11-59)||(13964430-13964478)
chr8 (24-68)||(24471271-24471315)
chr8 (11-59)||(33385182-33385230)
chr8 (11-75)||(35874546-35874609)
chr8 (11-59)||(41753769-41753817)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-68)||(145970-146027)
[»] scaffold1476 (1 HSPs)
scaffold1476 (12-68)||(741-797)
[»] scaffold0113 (1 HSPs)
scaffold0113 (11-59)||(40464-40512)
[»] scaffold0026 (1 HSPs)
scaffold0026 (9-63)||(88863-88917)
[»] scaffold0149 (1 HSPs)
scaffold0149 (11-68)||(24687-24744)


Alignment Details
Target: scaffold0036 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 89657 - 89593
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  89657 atacatcatttaatgaaagaatctaaaatgttgatttttgcttataataatgatcgaagagtgta 89593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 34327587 - 34327646
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||    
T  34327587 atatacatcatttaatgaatgaatctaaaatgttaatttttgtttataataatgatcgga 34327646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 41254012 - 41254069
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  41254012 atacatcatttaataaatgtatctaaaatgttgatttttgcttataataatgatcgga 41254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 20625298 - 20625250
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20625298 atacatcatttaataaatgaatttaaaatgttgatttttgtttataata 20625250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23444344 - 23444404
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    |||||||||||||||||||||||| || |||||||||||||| |||||||  |||||||||    
T  23444344 taaagactatatacatcatttaatgaatgaatctaaaatgttaatttttgcctataataat 23444404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 331869 - 331936
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| ||||||||||||||||| || |||||||||||||| ||||||| |||||||| ||| ||||    
T  331869 taaagattatatacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgga 331936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 7882345 - 7882283
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || |||||||||||||| ||||||| |||||||| ||| ||||    
T  7882345 actatatacatcatttaattaatgaatctaaaatgttaatttttgcttataatagtgaccgga 7882283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 24694287 - 24694229
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| || ||| |||||    
T  24694287 atacatcatttaataaatgaatctaaaatgttgatttttgcttatagtagtgaccggaa 24694229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 27224639 - 27224582
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||| ||| ||||    
T  27224639 atacatcatttaatgaataaatctaaaatgttgatttttgtttataatagtgaccgga 27224582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 48191774 - 48191717
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||| |||||||||||||||| ||| ||||    
T  48191774 atacatcatttaatgaatgaatctaaaatgttaatttttgtttataatagtgaccgga 48191717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 3020675 - 3020619
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||||||||||||||||||  ||| |||||||||| ||||||||||||||| |||||    
T  3020675 atatacatcatttaataaataaatataaaatgttggtttttgtttataatagtgatc 3020619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 54595849 - 54595801
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  54595849 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 54595801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 7826802 - 7826861
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||| | |||||||||||||| ||||| | |||||||| ||||||||    
T  7826802 atatacatcatttaatagatgaatctaaaatgttaattttagcttataatagtgatcgga 7826861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 51060745 - 51060792
Alignment:
Q  12 tacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||    
T  51060745 tacatcatttaataaattaatctaaaatattgatttttgtttataata 51060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 24694308 - 24694366
Alignment:
Q  10 tatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||| | ||||  |||| ||||||||||||||||||||||||| ||||||||    
T  24694308 tatacatcattaattaaataaatcaaaaatgttgatttttgtttataatagtgatcgga 24694366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 38893281 - 38893231
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    ||||||||| ||| |||| ||||||||||||||||||||||||||| ||||    
T  38893281 atcatttaacaaatgaatataaaatgttgatttttgtttataataacgatc 38893231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 21217225 - 21217168
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||| |||||||| ||| ||||    
T  21217225 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccgga 21217168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 40639876 - 40639941
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    |||||||||||||| ||  ||| ||||||||||||||||| |||||||| |||||| || ||||||    
T  40639876 atacatcatttaatgaataaatttaaaatgttgatttttgcttataatagtgatcgaaaggtgtat 40639941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 41253990 - 41253933
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||| ||||||||||||||||| |||||||| ||| ||||    
T  41253990 atacatcatttaatgaatgaatataaaatgttgatttttgattataatagtgaccgga 41253933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 42929090 - 42929135
Alignment:
Q  14 catcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||    
T  42929090 catcatttactaaattaatctaaaatgttgatttttgtttataata 42929135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 52215961 - 52216018
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| |  |||||||||||||||||||||| |||||||| ||| ||||    
T  52215961 atacatcatttaatgagtgaatctaaaatgttgatttttgcttataatagtgaccgga 52216018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 24722746 - 24722698
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||| ||||||||||| || ||||||| ||||||||    
T  24722746 atacatcatttaataaatgaatctaaaatattaatttttgcttataata 24722698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 30519679 - 30519727
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||||||| |||||| ||||||||    
T  30519679 atacatcatttaatgaatgaatctaaaatgttggtttttgcttataata 30519727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 40202469 - 40202509
Alignment:
Q  16 tcatttaataaaagaatctaaaatgttgatttttgtttata 56  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  40202469 tcatttaatgaaagaatctaaaatgttaatttttgtttata 40202509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 54783436 - 54783388
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||| ||||| || |||||||||||||| ||||||||||||||||    
T  54783436 atacatcaattaattaatgaatctaaaatgttaatttttgtttataata 54783388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 7823946 - 7824005
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||  | |||||||||||||| ||||| | |||||||| ||||||||    
T  7823946 atatacatcatttaatggatgaatctaaaatgttaattttagcttataatagtgatcgga 7824005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8504931 - 8504998
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatta 78  Q
    |||||||||| |||||| ||| ||||||||| | |||||||||||| |||||| ||||  ||||||||    
T  8504931 atacatcattaaataaatgaacctaaaatgtagttttttgtttatattaatgaccggatggtgtatta 8504998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 10841771 - 10841830
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||| |||||||||||| ||||  |||| ||||||| |||||||| ||||||||||||    
T  10841771 agactacatacatcatttattaaataaatcaaaaatgtagatttttgcttataataatga 10841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 41743656 - 41743601
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||| |||||||||||||||| || ||||||||||| || ||||||| ||||||||    
T  41743656 agaccatatacatcatttaatgaacgaatctaaaatattaatttttgcttataata 41743601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 51253729 - 51253682
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataat 58  Q
    ||||||||||||||||| | || |||||| ||||||||||||||||||    
T  51253729 atacatcatttaataaatggatttaaaatattgatttttgtttataat 51253682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 52461563 - 52461505
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||| | |||||||| ||||||  |||||||||||||||||||| |||||||||||||    
T  52461563 agactacaaacatcattcaataaat-aatctaaaatgttgatttttatttataataatga 52461505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 7829123 - 7829181
Alignment:
Q  10 tatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||||  | |||||||||||||| ||||| | |||||||| ||||||||    
T  7829123 tatacatcatttaatggatgaatctaaaatgttaattttagcttataatagtgatcgga 7829181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11472317 - 11472259
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||  ||||||||||||| || | ||||||||| |||||||||| ||||||||    
T  11472317 taaagactacgtacatcatttaatgaatgtatctaaaatattgatttttgcttataata 11472259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 29222862 - 29222828
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgat 45  Q
    ||||||||||||||||| |||||||||||||||||    
T  29222862 atacatcatttaataaatgaatctaaaatgttgat 29222828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 39579567 - 39579629
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcg 66  Q
    |||||| |||||||| ||||  || |||||||||| ||||||||||| |||||||| ||||||    
T  39579567 agactaaatacatcacttaacgaatgaatctaaaaagttgatttttgcttataatagtgatcg 39579629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 7823926 - 7823873
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    ||||||||||||||||| ||||||||||||||  || ||| |||||||| ||||    
T  7823926 atacatcatttaataaatgaatctaaaatgttatttattgcttataatagtgat 7823873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 24075502 - 24075449
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||| || ||||||||||||||| |||||| |||||||| ||| ||||    
T  24075502 atcatttaatgaatgaatctaaaatgttgttttttgcttataatagtgaccgga 24075449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 35511852 - 35511909
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| ||| ||| || |||||||||||||||||||||  |||||||||||| ||||    
T  35511852 atacataattcaatgaatgaatctaaaatgttgatttttacttataataatgaccgga 35511909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 40639790 - 40639847
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||| ||||||||| ||||||| |||||||| ||| ||||    
T  40639790 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgaccgga 40639847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 43177144 - 43177083
Alignment:
Q  14 catcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    ||||||| | |||| |||| |||||||| ||||||||||||||||| || |||||| |||||    
T  43177144 catcattaattaaatgaatttaaaatgtagatttttgtttataatagtggtcggaaggtgta 43177083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 44382886 - 44382959
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||| ||| |||||||||| || | |||||||| ||||||||||| |||||||| ||| | || ||||||||    
T  44382886 agactacatatatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgaccagatagtgtatt 44382959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 50745025 - 50744980
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttata 56  Q
    |||||||||||||||||  ||||||||||||||| ||||| |||||    
T  50745025 atacatcatttaataaataaatctaaaatgttgacttttgcttata 50744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52866488 - 52866541
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgttta 54  Q
    |||||| |||||| || ||||||| || |||||||||||||| |||||||||||    
T  52866488 taaagattatatatattatttaatgaatgaatctaaaatgttaatttttgttta 52866541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 10872731 - 10872683
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||| |||||| |||||||||| ||||||||    
T  10872731 atacatcatttaatgaatgaatttaaaatattgatttttgcttataata 10872683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 12744982 - 12745030
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || | |||||||||||| ||||||| ||||||||    
T  12744982 atacatcatttaatgaatgtatctaaaatgttaatttttgcttataata 12745030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 22497010 - 22496962
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||| || ||||||| ||||||||    
T  22497010 atacatcatttaatgaatgaatctaaaatattaatttttgcttataata 22496962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 27601284 - 27601252
Alignment:
Q  29 gaatctaaaatgttgatttttgtttataataat 61  Q
    |||| ||||||||||||||||||||||||||||    
T  27601284 gaatttaaaatgttgatttttgtttataataat 27601252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 29241561 - 29241613
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||| | || |||||||||| ||||||||| | ||||||||||||    
T  29241561 atacatcatttattgaatgaatctaaaaagttgattttggcttataataatga 29241613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 37897763 - 37897811
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| ||||||| || |||| ||||||||||||||||| ||||||||    
T  37897763 atacataatttaatgaatgaatttaaaatgttgatttttgcttataata 37897811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2865039 - 2865117
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtattat 79  Q
    |||| ||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||| || | ||||||||||    
T  2865039 taaaaactatatacatcatttaatgaattaatctaaaatgttaatttttgtttataataatgaccgaatagtgtattat 2865117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36786219 - 36786161
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||||||||| | | || |||||||||||||||||||||||||||||||    
T  36786219 taaagactatatacatcattaattgaatgaatctaaaatgttgatttttgtttataata 36786161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 34616289 - 34616362
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    ||||||||||||||||||||| || | |||||||| ||||||||||| |||||||| ||||||||  |||||||    
T  34616289 agactatatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatcggatggtgtatt 34616362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 2582874 - 2582810
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||||||||||||| ||  |||||||||| |||||||||| |||||||||||||||||    
T  2582874 agactacatacatcatttaatgaatcaatctaaaatattgatttttgcttataataatgatcgga 2582810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 25022577 - 25022513
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||||||| || |||| ||||||||| |||| |||||||||||||||||||| ||||||    
T  25022577 atacatcatttaatgaatgaatgtaaaatgttaatttgtgtttataataatgatcggagagtgta 25022513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 21142154 - 21142101
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||||||||||    
T  21142154 actaaatacatcatttaatgcatgaatctaaaatgttgatttttgtttataata 21142101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 39160895 - 39160952
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||| ||| ||||    
T  39160895 atacatcatttaatgaatgaatctaaaatgtagatttttgtttataatagtgaccgga 39160952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39533825 - 39533776
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttg 50  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  39533825 taaagattatatacatcatttaataaatgaatctaaaatgttaatttttg 39533776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 484025 - 483981
Alignment:
Q  24 taaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  484025 taaatgaatctaaaatgttgatttttgtttataataatgaccgga 483981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 34616274 - 34616226
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||||| |||||||||||||||||    
T  34616274 atacatcatttaatgaatgaatctaaaatgtagatttttgtttataata 34616226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 39533837 - 39533889
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||||||||||    
T  39533837 atacatcatttaatgaataaatctaaaatgttgatttttgcttataataatga 39533889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 12672488 - 12672441
Alignment:
Q  29 gaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||    
T  12672488 gaatctaaaatgtaaatttttgtttataataatgatcggaaggtgtat 12672441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 40575900 - 40575841
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||| |||||||||| |||| ||||||||| |||||||||||||||| ||| ||||    
T  40575900 atatacattatttaataaatgaatttaaaatgttcatttttgtttataatagtgaccgga 40575841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 22493657 - 22493711
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    ||||||||||||||||| |||| |||||||||| |||||| |||||||| |||||    
T  22493657 atacatcatttaataaatgaatataaaatgttgttttttgcttataatactgatc 22493711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 23568456 - 23568518
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || ||||||||||||||  |||||| |||||||| ||| ||||    
T  23568456 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccgga 23568518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 39235196 - 39235158
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgattttt 49  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  39235196 atacatcatttaataaatgaatctaaaatgttgattttt 39235158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 52914067 - 52914013
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttat 55  Q
    ||||||||||||||||||||| || || |||||||||||||| ||||||| ||||    
T  52914067 taaagactatatacatcatttcatgaatgaatctaaaatgttaatttttgcttat 52914013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 2254013 - 2253956
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| ||  |||||||||  || |||||||||||||||||||||||||    
T  2254013 atacatcatttaatgaataaatctaaaaaattaatttttgtttataataatgatcgga 2253956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 12912670 - 12912613
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcg 66  Q
    |||||||||||||||| ||  ||||||||||||| ||||||  |||||||||||||||    
T  12912670 atatacatcatttaatgaataaatctaaaatgttaatttttacttataataatgatcg 12912613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 16170984 - 16171049
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    |||||| |||||||||||||| ||  ||||||||||||||||||||  |||||||| ||| |||||    
T  16170984 agactacatacatcatttaattaataaatctaaaatgttgatttttccttataatagtgaccggaa 16171049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 41654566 - 41654493
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||| |||||||||| ||||| ||  ||||||||||||||||||||| || ||||| ||| ||| |||||||||    
T  41654566 agaccatatacatcaattaattaattaatctaaaatgttgatttttgcttttaatagtgaccgggaagtgtatt 41654493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 46803489 - 46803546
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| ||||||| |||||||||||| |||||||||||  ||||||| |||||||||    
T  46803489 atacataatttaatgaaagaatctaaactgttgatttttacttataattatgatcgga 46803546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 47308175 - 47308118
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcg 66  Q
    |||||||||||| ||| || ||||| |||||||||||||||| |||||||| ||||||    
T  47308175 atatacatcattaaatgaatgaatccaaaatgttgatttttgcttataatagtgatcg 47308118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 48603679 - 48603728
Alignment:
Q  19 tttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| || |||||||||||||||||||||||||| |||| ||||||||    
T  48603679 tttaatgaatgaatctaaaatgttgatttttgtttacaatagtgatcgga 48603728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 24156220 - 24156272
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||||||  ||||||||||||| | ||||| ||||||||||||    
T  24156220 atacatcatttaataaataaatctaaaatgttaaattttgcttataataatga 24156272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 40952403 - 40952343
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||| || |||||||||||||||||| ||| |||||||| ||| |||| ||||||    
T  40952403 atcatttaatgaatgaatctaaaatgttgattattgcttataatagtgaacggatagtgta 40952343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 55936068 - 55936116
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  55936068 atacatcatttaatgaatgaatctaaaatattgatttttgcttataata 55936116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14451026 - 14450959
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||| || | ||||||| ||| || ||||||||||||| |||||||| |||||||| ||||||||    
T  14451026 taaagaccatgtgcatcattaaatgaatgaatctaaaatgtagatttttgcttataatagtgatcgga 14450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 27537114 - 27537063
Alignment:
Q  12 tacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||||||||| || |||||||||||||  ||||||| ||||||||||||    
T  27537114 tacatcatttaatgaatgaatctaaaatgtaaatttttgcttataataatga 27537063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 38382050 - 38382105
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  38382050 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 38382105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 47181633 - 47181688
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  47181633 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 47181688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 48402477 - 48402422
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  48402477 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 48402422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 56364392 - 56364337
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  56364392 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 56364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 1829626 - 1829676
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| |||| ||||||||||||| | ||| |||||||||||    
T  1829626 atatacatcatttattaaatgaatctaaaatgtagttttatgtttataata 1829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 4406300 - 4406234
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||||||||||| ||  ||||||||||||||||||||  |||||||| ||| ||||  |||||||    
T  4406300 atacatcatttaatgaataaatctaaaatgttgatttttacttataatagtgaccggatggtgtatt 4406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 21113071 - 21113121
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||| | |||| |||| |||||||| |||||||||||||||||    
T  21113071 atatacatcattaattaaacgaatataaaatgtagatttttgtttataata 21113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32599561 - 32599615
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    ||||||||||||||||| ||||||||||| || ||||||  |||||||| |||||    
T  32599561 atacatcatttaataaatgaatctaaaatattaatttttacttataatagtgatc 32599615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 40814754 - 40814796
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||||||||| || |||||||||||||| ||||||||||||||    
T  40814754 atcatttaatgaatgaatctaaaatgttaatttttgtttataa 40814796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 43616221 - 43616279
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    |||| ||||||||||||||||| |||| |||||  |||||||||| |||||||| ||||    
T  43616221 actaaatacatcatttaataaatgaatttaaaaaattgatttttgcttataatagtgat 43616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 44549315 - 44549361
Alignment:
Q  13 acatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||| || |||||||||||||||||||||  ||||||||    
T  44549315 acatcatttaattaatgaatctaaaatgttgatttttacttataata 44549361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 55934704 - 55934642
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || ||||||||||||||   ||||| |||||||| ||| ||||    
T  55934704 actatatacatcatttaatgaatgaatctaaaatgttaggttttgcttataatagtgaccgga 55934642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 484034 - 484079
Alignment:
Q  30 aatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  484034 aatctaaaatgttgatttttgcttataatagtgaccggagagtgta 484079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 23004028 - 23003971
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    |||||| |||||| ||||||| || |||||||||||||| ||||||| ||||| ||||    
T  23004028 agactacatacattatttaatgaacgaatctaaaatgttaatttttgcttatagtaat 23003971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 32588156 - 32588115
Alignment:
Q  18 atttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| ||| |||||||||||||||||||||| ||||||||    
T  32588156 atttaacaaatgaatctaaaatgttgatttttgattataata 32588115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 34937156 - 34937095
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    |||||||| | || |||| ||||||||  ||||||||||||||| |||| ||||||||||||    
T  34937156 atcatttattgaatgaatataaaatgtaaatttttgtttataatgatgaacggaaagtgtat 34937095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 38382035 - 38381978
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||  ||||||| |||||||| ||| ||||    
T  38382035 atacatcatttaatcaatgaatctaaaatgtaaatttttgcttataatagtgaccgga 38381978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 47181618 - 47181561
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||| |||||||| |||||||| |||||||| ||| ||||    
T  47181618 atacatcatttaatgaatgaatttaaaatgtagatttttgcttataatagtgaccgga 47181561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 53176367 - 53176310
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||| ||||||||| ||||||  |||||||| ||||||||    
T  53176367 atacatcatttaatgaatgaatataaaatgttaatttttacttataatagtgatcgga 53176310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 54931899 - 54931952
Alignment:
Q  10 tatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||||||||||| || |||||||||||||| ||||||  || |||||||||    
T  54931899 tatacatcatttaatgaatgaatctaaaatgttaatttttacttgtaataatga 54931952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 56364407 - 56364464
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||  |||||||| ||| ||||    
T  56364407 atacatcatttaatgaatgaatctaaaatgtagatttttacttataatagtgaccgga 56364464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 6975007 - 6975071
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||||||||| ||| || ||||  |||||||||||||||| |||||||| ||| ||||    
T  6975007 agactacatacatcattaaatgaatgaattcaaaatgttgatttttgcttataatagtgaccgga 6975071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 12672526 - 12672574
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| ||  |||||||||| ||||||||| |||||||||    
T  12672526 atacatcatttaatgaataaatctaaaatattgatttttctttataata 12672574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 24448746 - 24448809
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||||||| || |||| ||||| ||||||||||  |||||||| |||||||| ||||||    
T  24448746 atacatcatttaattaatgaatgtaaaa-gttgatttttccttataatagtgatcggatagtgta 24448809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 48402492 - 48402540
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||| | |||||||| ||||||||    
T  48402492 atacatcatttaatgaatgaatctaaaatatagatttttgcttataata 48402540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 52914079 - 52914127
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||| || ||||||| ||||||||    
T  52914079 atacatcatttaatgaatgaatctaaaatattaatttttgcttataata 52914127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 7295137 - 7295194
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||    
T  7295137 atacatcatttaataaatgaatgtaaaatgttaatttttgtttataataatgatcgga 7295194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 23818486 - 23818435
Alignment:
Q  8 tatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  23818486 tatatacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 23818435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 25245224 - 25245281
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||| ||| ||||    
T  25245224 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccgga 25245281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 2943271 - 2943223
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  2943271 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 2943223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 21586873 - 21586825
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  21586873 atacatcattgaataaatgaatctaaaatattgatttttgtttataata 21586825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 43103131 - 43103063
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtattat 79  Q
    ||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||| ||||  |||||||||    
T  43103131 atacatcatttaataaatgaatttaaaatgttaatttttgcttataatagtgaccggagggtgtattat 43103063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 43130295 - 43130227
Alignment:
Q  8 tatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    ||||||||||||| | | || |||||||||| || ||||||| |||||||||||||| |||||||||||    
T  43130295 tatatacatcattaattgaatgaatctaaaacgtagatttttatttataataatgattggaaagtgtat 43130227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 4089190 - 4089140
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||||| || |||| |||||| |||||||||||||||||||    
T  4089190 atatacatcatttaatgaatgaatataaaatattgatttttgtttataata 4089140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 5950270 - 5950332
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || ||||||||||||||  |||||| |||||||| ||| ||||    
T  5950270 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccgga 5950332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 7701247 - 7701190
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||| |||||||| ||| ||||    
T  7701247 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccgga 7701190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 10095778 - 10095721
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||||| ||| ||||    
T  10095778 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaccgga 10095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 7701262 - 7701317
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  7701262 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 7701317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 12088877 - 12088822
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||| ||| |||||||||||||||  |||||||||| |||||||||| ||||||||    
T  12088877 agaccatacacatcatttaataaattaatctaaaatattgatttttgcttataata 12088822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 13797667 - 13797709
Alignment:
Q  17 catttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||| ||||||||||||||||||||||  |||||||    
T  13797667 catttaataaatgaatctaaaatgttgatttttgcatataata 13797709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 31115678 - 31115620
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||||||  | |||||||||||||| || |||| ||||||||    
T  31115678 taaagaatatatacatcatttaatggatgaatctaaaatgttaatctttgcttataata 31115620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 45914483 - 45914525
Alignment:
Q  12 tacatcatttaataaaagaatctaaaatgttgatttttgttta 54  Q
    |||||||||||||||| |||| ||||||||| |||||||||||    
T  45914483 tacatcatttaataaatgaatttaaaatgttaatttttgttta 45914525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 8127908 - 8127965
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||| | || |||||||||  |||||||||||||||||||| ||| ||||    
T  8127908 atacatcatttattgaatgaatctaaacagttgatttttgtttataatagtgaccgga 8127965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 9555341 - 9555398
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||  | ||||| |||||||||||| ||||    
T  9555341 atacatcatttaatgaatgaatctaaaatgtaaagttttgcttataataatgaccgga 9555398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 27330558 - 27330517
Alignment:
Q  18 atttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||| || |||||||||||||||||||||| ||||||||    
T  27330558 atttaatgaatgaatctaaaatgttgatttttgcttataata 27330517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31813478 - 31813413
Alignment:
Q  3 aagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||| |||||||||||| | | || |||||||||||||  |||||||||||||||| ||| ||||    
T  31813478 aagaccatatacatcattaattgaatgaatctaaaatgtaaatttttgtttataatagtgaccgga 31813413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 41404074 - 41404017
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||| | ||||||| |||||||| ||| ||||    
T  41404074 atacatcatttaatgaatgaatctaaaatgataatttttgcttataatagtgaccgga 41404017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 46022629 - 46022686
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||  |||||||| ||| ||||    
T  46022629 atacatcatttaatgaatgaatctaaaatgtagattttttcttataatagtgaccgga 46022686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9930450 - 9930390
Alignment:
Q  8 tatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||| ||| | |||| ||||||||||| |  |||||||||||||||||| ||||||    
T  9930450 tatatacataattaattaaatgaatctaaaatataaatttttgtttataataataatcgga 9930390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 29168422 - 29168370
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||| |||||||||| ||| |||||| ||||||||||| || |||||||||    
T  29168422 atacattatttaataaatgaacctaaaaagttgatttttgcttgtaataatga 29168370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30138845 - 30138801
Alignment:
Q  13 acatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||||||||||| || ||||| |||||||||||||||| ||||||    
T  30138845 acatcatttaatgaatgaatccaaaatgttgatttttgcttataa 30138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 31115690 - 31115738
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| ||||||| || ||| |||||||||||||||||| ||||||||    
T  31115690 atacataatttaatgaatgaagctaaaatgttgatttttgcttataata 31115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 31996573 - 31996646
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||| |||||||| ||| |||| ||||||||    
T  31996573 agactacatacatcatttaataaatgaacctaaaatgttgatttttgcttataatagtgaccggagagtgtatt 31996646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 10258362 - 10258317
Alignment:
Q  12 tacatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  10258362 tacatcatttaataaatgaatctaaaatgttgatttttgtttataa 10258317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 34170137 - 34170089
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||    
T  34170137 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataata 34170089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 12104804 - 12104746
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  12104804 atacatcatttaataaatgaatttaaaatgttgatttttgcttataatagtgaccggaa 12104746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 15517171 - 15517237
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||||||||||| || ||||||||||| |||||||||| |||||||||||| || | ||||||||    
T  15517171 atacatcatttaatgaatgaatctaaaatattgatttttgcttataataatgaccgtagagtgtatt 15517237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 29419868 - 29419921
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    |||||||||||||| || |||||||||||||||||||||  |||||||||||||    
T  29419868 atacatcatttaatgaatgaatctaaaatgttgatttttacttataataatgat 29419921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 34379816 - 34379864
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  34379816 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 34379864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26527259 - 26527192
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||| |||||| |||| || || | |||||||||||||||||||| |||||||| ||||||||    
T  26527259 taaagactacatacattattttatgaatgtatctaaaatgttgatttttgcttataatagtgatcgga 26527192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 29072127 - 29072084
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgttta 54  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  29072127 atacatcatttaataaatgaatttaaaatgttgatttttgttta 29072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 29104700 - 29104657
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgttta 54  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  29104700 atacatcatttaataaatgaatttaaaatgttgatttttgttta 29104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12104816 - 12104874
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||| || ||||||||||  ||||||||||||| ||||||| ||||||||    
T  12104816 taaagactatatatatgatttaataaataaatctaaaatgttaatttttgcttataata 12104874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 16121046 - 16121103
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||| | || |||||||||| ||||||||||| |||||||| ||||||||    
T  16121046 atacatcatttatttaatgaatctaaaaagttgatttttgcttataatagtgatcgga 16121103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 26527271 - 26527328
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||| ||||||| |||||||| ||| ||||    
T  26527271 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataatagtgaacgga 26527328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 1875044 - 1875104
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    ||||| |||||||| | ||  |||||||||||||||||||||||| ||||||||| |||||    
T  1875044 atatatatcatttattgaataaatctaaaatgttgatttttgtttgtaataatgaccggaa 1875104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 14218261 - 14218209
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataat 58  Q
    ||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||    
T  14218261 actatattcattatttaataaatgaatctaaaatattgatttttgcttataat 14218209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 33689303 - 33689366
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| ||||||||||||||||| ||| || ||||||||||||||| || ||||| ||||||||    
T  33689303 agactacatacatcatttaataaatgaaact-aaatgttgatttttgcttttaatagtgatcgga 33689366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32254892 - 32254959
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||| | |||||||||||||| || ||||||||||| || | ||||| |||||||| ||||||||    
T  32254892 taaagaccacatacatcatttaatgaatgaatctaaaatattaacttttgcttataatagtgatcgga 32254959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28555018 - 28555076
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||| || | ||||||| |||||| ||||||||||||| |||||||| ||||||||    
T  28555018 taaagaccatgtgcatcattaaataaatgaatctaaaatgtagatttttgcttataata 28555076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Complemental strand, 31714596 - 31714546
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||| |||||| || ||| |||||||||||||||||| ||||||||    
T  31714596 atatacatcgtttaatgaatgaaactaaaatgttgatttttgcttataata 31714546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 16199179 - 16199122
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||| ||||||||| |||||||| |||||||| ||| ||||    
T  16199179 atacatcatttaatgaatgaacctaaaatgtagatttttgcttataatagtgaccgga 16199122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 3203752 - 3203800
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||| |||| ||| |||||| ||||||||||| ||||||||    
T  3203752 atacatcatttattaaatgaacctaaaaagttgatttttgcttataata 3203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 12218500 - 12218456
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||| || |||| ||||||||||||||||| ||||||||    
T  12218500 atcatttaatgaatgaatataaaatgttgatttttgcttataata 12218456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 12480133 - 12480081
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    |||||||||||||||  ||  ||||||||||||||||||||  ||||||||||    
T  12480133 atatacatcatttaacgaataaatctaaaatgttgatttttacttataataat 12480081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 4297278 - 4297337
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaa 70  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||    
T  4297278 atacatcatttaattaatgaatataaaatgttgatttttgtttataatagtgatcggaaa 4297337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 4967775 - 4967709
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| |||| ||| |||||| ||||    
T  4967775 atatacatcatttaataaatgaatttaaaatgttgatttttgtttaaaatagtgaccggaaaatgta 4967709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 7505177 - 7505229
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||||    
T  7505177 atacatcatttaatgaatgaatccaaaatgttgatttttgtttataataatga 7505229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 10437711 - 10437775
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||| ||||    
T  10437711 agactacatacataatttaataaatgaatctaaaatgttgatttttgcttataatagtgaccgga 10437775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 18652846 - 18652894
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||    
T  18652846 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataata 18652894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 41005734 - 41005678
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataa 60  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||  |||||||||    
T  41005734 agactacatacatcatttaataaatgaatctaaaatgttgatttttacttataataa 41005678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 31963585 - 31963513
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    |||||| ||||||||||||||||| ||||||||||||   | |||||||||||||| ||| ||||| ||||||    
T  31963585 agactacatacatcatttaataaatgaatctaaaatgcaaaattttgtttataatagtgaccggaaggtgtat 31963513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 17625714 - 17625775
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| |||||||| |||||    
T  17625714 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 17625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 32398030 - 32397977
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    ||||||| || |||||| ||||||||||| || |||||||||||||||||||||    
T  32398030 atacatctttcaataaatgaatctaaaatattaatttttgtttataataatgat 32397977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 3100471 - 3100411
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    |||||| |||||||||||| | || |||||||||||||| ||||||| |||||||| ||||    
T  3100471 agactacatacatcatttattgaatgaatctaaaatgttaatttttgcttataatagtgat 3100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15549403 - 15549463
Alignment:
Q  8 tatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||| ||| | | || ||||||||||||||||||||||||||||||| ||| ||||    
T  15549403 tatatacattattaattgaatgaatctaaaatgttgatttttgtttataatagtgaccgga 15549463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25941719 - 25941667
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||||||  ||| ||| ||||||||||||| ||||||||||||    
T  25941719 atacatcatttaataaataaatttaatatgttgatttttgcttataataatga 25941667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 30371392 - 30371340
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||| |||||||||| |||||||||||||| ||||||  ||||||||||||    
T  30371392 atacattatttaataaatgaatctaaaatgttaatttttacttataataatga 30371340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 32911536 - 32911476
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttga-tttttgtttataataatga 63  Q
    |||||| ||||||||||||||||| ||| |||||| ||||| |||||| ||||||||||||    
T  32911536 agactaaatacatcatttaataaatgaacctaaaaagttgattttttgcttataataatga 32911476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 37067671 - 37067623
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||| || ||||||||||||||||    
T  37067671 atacatcatttaatgaatgaatctaaaatattaatttttgtttataata 37067623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 43438339 - 43438391
Alignment:
Q  14 catcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcg 66  Q
    ||||||||||| || ||||||||||| || |||||||||||||||| ||||||    
T  43438339 catcatttaatgaatgaatctaaaatattaatttttgtttataatagtgatcg 43438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11795805 - 11795750
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttata 56  Q
    ||||||| |||||||||||| | | || |||||||||||||||||||||| |||||    
T  11795805 taaagaccatatacatcattaattgaatgaatctaaaatgttgatttttgcttata 11795750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 14772605 - 14772550
Alignment:
Q  13 acatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||| || ||| |||||||||||||||||| |||||||| ||| ||||    
T  14772605 acatcatttaatgaatgaacctaaaatgttgatttttgcttataatagtgaccgga 14772550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 26045305 - 26045348
Alignment:
Q  16 tcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||| ||| || |||||||||||||||||||||||||||||||    
T  26045305 tcattcaattaatgaatctaaaatgttgatttttgtttataata 26045348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 37067837 - 37067894
Alignment:
Q  2 aaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||| | |||  ||||||||||||| |||||||| ||||||||    
T  37067837 aaagaccatatacatcattaattaattgaatctaaaatgtagatttttgcttataata 37067894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 11795821 - 11795877
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaag 71  Q
    |||||||||| || ||||  ||||| |||||||||| |||||||||||| |||||||    
T  11795821 atcatttaatgaatgaataaaaaatattgatttttgcttataataatgaccggaaag 11795877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 22227055 - 22227119
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| ||| |||||||||| || ||| |||||| ||||||||||| |||||||| ||| ||||    
T  22227055 agactaaatatatcatttaatgaatgaacctaaaacgttgatttttgcttataatagtgaccgga 22227119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 36935 - 36985
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  36935 atacatcatttaatgaatgaatctaaaatgttgatttttgtttataataat 36985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 39183 - 39241
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatg 62  Q
    |||| |||||||||||||||| || ||||||||||| |||||||||| |||||||||||    
T  39183 agaccatatacatcatttaatgaatgaatctaaaattttgatttttgcttataataatg 39241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5529235 - 5529285
Alignment:
Q  18 atttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  5529235 atttaataaacgaatctaaaatgttgatttttgtttataataatgaccgga 5529285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27497338 - 27497404
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||| |||||||| ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  27497338 taaagaccatatacattattaaataaaggaatctaaaatgtagattttt-tttataataatgatcgga 27497404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 36001822 - 36001776
Alignment:
Q  29 gaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  36001822 gaatctaaaatgttaatttttgtttataataatgatcggagagtgta 36001776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 3098192 - 3098135
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    |||||| ||||||||||||||||| | |||||||| ||||||||||| ||||||||||    
T  3098192 agactacatacatcatttaataaatgtatctaaaacgttgatttttgcttataataat 3098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 13882759 - 13882812
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||||| || ||||||||||||||  |||||||||||||||    
T  13882759 actatatacatcatttaatgaatgaatctaaaatgttagtttttgtttataata 13882812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 23378023 - 23378080
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||| ||||||||||| || ||||||| |||||||||||| ||||    
T  23378023 atacatcatttaataaatgaatctaaaatattaatttttgcttataataatgaccgga 23378080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 33555258 - 33555311
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    ||||||||||| || ||  |||||||||||||||||||||||||||||||||||    
T  33555258 atacatcattttatgaataaatctaaaatgttgatttttgtttataataatgat 33555311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 1961390 - 1961438
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  1961390 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 1961438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 31024230 - 31024182
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||    
T  31024230 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataata 31024182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 38181819 - 38181767
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||||||    
T  38181819 atacatcatttaatgaatgaatctaaaatattgatttttgcttataataatga 38181767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27331830 - 27331897
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||| |||||||||| | | || |||||||||||||||||||||| |||||||| ||| ||||    
T  27331830 taaagactacatacatcattaattgaatgaatctaaaatgttgatttttgcttataatagtgaccgga 27331897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 32630480 - 32630535
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| ||  |||||||||||||||||||| |||||||||    
T  32630480 agactacatacatcatttaatgaataaatctaaaatgttgatttttatttataata 32630535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 596106 - 596156
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  596106 atatacattatttaataaatgaatttgaaatgttgatttttgtttataata 596156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 13333528 - 13333586
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    |||||||||||||| || ||||||||||||| |||||||| |||||||| ||| |||||    
T  13333528 atacatcatttaatcaatgaatctaaaatgtagatttttgcttataatagtgaccggaa 13333586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21183408 - 21183454
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||    
T  21183408 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataa 21183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 32630475 - 32630413
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||| |||||||||||| | | || ||||| ||||||| |||||||||||||||||||||    
T  32630475 taaagaccatatacatcattaattgaatgaatccaaaatgtagatttttgtttataataatga 32630413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 38465848 - 38465782
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||||||||||| ||  ||||||||||||||||||||| |||||||| ||| ||||  |||||||    
T  38465848 atacatcatttaatgaattaatctaaaatgttgatttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 2050171 - 2050236
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    ||||||||||||||||| |||||||||||    | ||||| ||||||||||||| |||||||||||    
T  2050171 atacatcatttaataaatgaatctaaaataaaaagttttgcttataataatgattggaaagtgtat 2050236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 3098207 - 3098264
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||| |||||||| ||| ||||    
T  3098207 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccgga 3098264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 3121481 - 3121424
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||||||||| ||||||||||| |||||||||| |||||||| ||| ||||    
T  3121481 atacattatttaataaatgaatctaaaatattgatttttgcttataatagtgaccgga 3121424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 6648171 - 6648224
Alignment:
Q  14 catcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgg 67  Q
    ||||||||||| || |||  |||||| |||||||||||||||||||||||||||    
T  6648171 catcatttaatgaatgaacataaaatattgatttttgtttataataatgatcgg 6648224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 14022884 - 14022937
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||||||| || ||||||||||||||  |||||| ||||||||    
T  14022884 actatatacatcatttaatgaatgaatctaaaatgttagtttttgattataata 14022937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 25270937 - 25270994
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||| |||||||| |||||||| ||| ||||    
T  25270937 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataatagtgaccgga 25270994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 34893786 - 34893827
Alignment:
Q  19 tttaataaaagaatctaaaatgttgatttttgtttataataa 60  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  34893786 tttaataaaagaatttaaaatgttgatttttgcttataataa 34893827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 11726576 - 11726624
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||||||    
T  11726576 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataata 11726624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 15119836 - 15119788
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||||||| ||||||| ||||||||    
T  15119836 atacatcatttaatgaatgaatctaaaatgttaatttttgcttataata 15119788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 41056969 - 41057017
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || ||||||||||||| |||||||| ||||||||    
T  41056969 atacatcatttaatgaatgaatctaaaatgtagatttttgcttataata 41057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1961378 - 1961311
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||| |||||||||||| | ||||  ||||||||||||  ||||||| |||||||| ||||||||    
T  1961378 taaagaccatatacatcattaattaaacaaatctaaaatgtaaatttttgcttataatagtgatcgga 1961311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 11342049 - 11342108
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||| | |||| ||||||||||| | |||||||| |||||||| ||||||||    
T  11342049 atatacatcattaattaaatgaatctaaaatatagatttttgcttataatagtgatcgga 11342108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 13333511 - 13333452
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||| |||||||||||||| || | |||||||| ||||||||||| |||||||| |||||    
T  13333511 actacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataatagtgatc 13333452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15119848 - 15119915
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||| |||||||||||| ||| ||  |||||||||||| |||||||| |||||||| ||| ||||    
T  15119848 taaagacaatatacatcattaaatgaataaatctaaaatgtagatttttgcttataatagtgaccgga 15119915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 15916799 - 15916744
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||| ||||||| || ||||||||||| |||||||||| ||||||||    
T  15916799 agactacatacattatttaatgaatgaatctaaaatattgatttttgcttataata 15916744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 25270922 - 25270867
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||||    
T  25270922 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataata 25270867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 8510581 - 8510643
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || ||||| ||||||||  |||||| |||||||| ||| ||||    
T  8510581 actatatacatcatttaatgaatgaatccaaaatgttagtttttgcttataatagtgaccgga 8510643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10996315 - 10996237
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtattat 79  Q
    ||||||| |||||||||||| | | || |||| |||||| |  ||||||| |||||||||||||||||  |||||||||    
T  10996315 taaagaccatatacatcattaattcaatgaatttaaaatataaatttttgcttataataatgatcggattgtgtattat 10996237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 13994266 - 13994327
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || |||||||||||||| | ||||| |||||||| ||| ||||    
T  13994266 actatatacatcatttaatgaatgaatctaaaatgtt-agttttgcttataatagtgaccgga 13994327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37182885 - 37182831
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttat 55  Q
    ||||| |||||||||||||||||| || |||||||||||||  ||||||| ||||    
T  37182885 taaaggctatatacatcatttaattaatgaatctaaaatgtaaatttttgcttat 37182831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 7079425 - 7079372
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||  | |||| ||||||||||||||||| |||||||| ||||||||    
T  7079425 atcatttaatggatgaatttaaaatgttgatttttgcttataatagtgatcgga 7079372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 31102030 - 31102087
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||   | ||||| |||||||||||||||||    
T  31102030 atacatcatttaatgaatgaatctaaaatgcaaacttttgcttataataatgatcgga 31102087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 41056954 - 41056893
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||||| |||||||||||||| || | ||||||||  |||||||||| |||||||| |||||    
T  41056954 agactacatacatcatttaatgaatgtatctaaaacattgatttttgcttataatagtgatc 41056893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 45473136 - 45473079
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||| || ||||||  |||||||||||| ||||    
T  45473136 atacatcatttaatgaatgaatctaaaattttaatttttaattataataatgaccgga 45473079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 2544432 - 2544476
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttat 55  Q
    |||||||||||||| || ||| |||||| ||||||||||||||||    
T  2544432 atacatcatttaatgaatgaacctaaaaagttgatttttgtttat 2544476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 4563945 - 4563993
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||||| | ||||||||||| |||||||||  ||||||||    
T  4563945 atacatcatttaatagatgaatctaaaatattgatttttacttataata 4563993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 13988368 - 13988404
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgtt 42  Q
    ||||||||||||||||||| || ||||||||||||||    
T  13988368 actatatacatcatttaatgaatgaatctaaaatgtt 13988404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26003499 - 26003447
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataat 58  Q
    |||| |||||||||||||| || ||| ||||||| |||||||||| |||||||    
T  26003499 actacatacatcatttaatgaatgaacctaaaatattgatttttgcttataat 26003447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26003506 - 26003562
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    ||||||| |||||||||||| | | || ||||||||||||| |||||||| ||||||    
T  26003506 taaagaccatatacatcattaattgaatgaatctaaaatgtagatttttgcttataa 26003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 36547400 - 36547352
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||| |||| |||| ||||||||  ||||||||||||||||    
T  36547400 atacatcatttattaaatgaatttaaaatgtcaatttttgtttataata 36547352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 43701411 - 43701375
Alignment:
Q  13 acatcatttaataaaagaatctaaaatgttgattttt 49  Q
    |||||||||||| || |||||||||||||||||||||    
T  43701411 acatcatttaatgaatgaatctaaaatgttgattttt 43701375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 50550200 - 50550257
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||    
T  50550200 atacatcatttaatgaatgaatctaaaatgttgatttttctttataatagtgatcgga 50550257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 33765868 - 33765920
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  33765868 atacatcatttaataaatgaatctaaaatgttgatttttgcttataattatga 33765920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 37589671 - 37589730
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||| ||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||    
T  37589671 agaccatatacatcatctaataaaggaatttaaaatgttgatttttatttataataatga 37589730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 6156693 - 6156635
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaa 69  Q
    |||||||||||| | || |||||||||| |||||||||||||||||||| |||||||||    
T  6156693 atacatcatttattgaatgaatctaaaaagttgatttttgtttataatagtgatcggaa 6156635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 28038903 - 28038965
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||| |||||||| | ||||||    
T  28038903 actaaatacatcatttaataaatgaatctaaaaagttgatttttgcttataatagtaatcgga 28038965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 14967306 - 14967359
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgat 64  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||| ||||    
T  14967306 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgat 14967359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 24981922 - 24981979
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||| ||| ||||    
T  24981922 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccgga 24981979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 46495044 - 46494993
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||| |||||||||||||||||  ||||||||||||||||||||| ||||||    
T  46495044 actacatacatcatttaataaataaatctaaaatgttgatttttgattataa 46494993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 23398483 - 23398421
Alignment:
Q  6 actatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||||||||| || ||||||||||||||  |||||| |||||||| ||| ||||    
T  23398483 actatatacatcatttaatgaatgaatctaaaatgttagtttttgcttataatagtgaccgga 23398421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41007748 - 41007806
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||| | |||||||||||||| || |||||||||||||||| ||||| ||||||||    
T  41007748 taaagaccacatacatcatttaatgaatgaatctaaaatgttgaattttgcttataata 41007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 39362890 - 39362935
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttata 56  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||    
T  39362890 atacttcatttaataaatgaatctaaaatattgatttttgtttata 39362935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 3549860 - 3549924
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||| ||||||| || |||| ||||||||| ||||||| |||||||||||||| || ||||||    
T  3549860 atacattatttaatgaatgaatttaaaatgttaatttttgcttataataatgatcagagagtgta 3549924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 3013689 - 3013748
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||||| || |||| ||||||||| ||||||| |||||||| ||| ||||    
T  3013689 atatacatcatttaatgaatgaatgtaaaatgttaatttttgcttataatagtgaccgga 3013748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25547540 - 25547482
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||| |||||||||||||| |||| |||||||||||||  | ||||| ||||||||    
T  25547540 taaagaccatatacatcatttattaaatgaatctaaaatgtcaaattttgattataata 25547482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 22558949 - 22558994
Alignment:
Q  16 tcatttaataaaagaatctaaaatgttgatttttgtttataataat 61  Q
    ||||||| |||| ||||||||||||| || ||||||||||||||||    
T  22558949 tcatttattaaatgaatctaaaatgtggaattttgtttataataat 22558994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 24981907 - 24981834
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||| |||||||||||||| || | |||||||| ||| ||||||| |||||||| ||| | || ||||||||    
T  24981907 agactacatacatcatttaatgaatgtatctaaaacgttaatttttgcttataatagtgaccagatagtgtatt 24981834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 46412758 - 46412705
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||| || ||||||||||| || ||||||| |||||||| ||||||||    
T  46412758 atcatttaatgaatgaatctaaaatattaatttttgcttataatagtgatcgga 46412705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 46906920 - 46906863
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||| | |||||||| |||||||| ||| ||||    
T  46906920 atacatcatttaatgaatgaatctaaaatatagatttttgcttataatagtgaccgga 46906863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 46906935 - 46906988
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataa 57  Q
    |||||| |||||||||||||| || | |||||||| ||||||||||| ||||||    
T  46906935 agactacatacatcatttaatgaatgtatctaaaacgttgatttttgcttataa 46906988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 50308709 - 50308766
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||  |||||||||| |||||| |||||||| ||||||||    
T  50308709 atacatcatttaatgaatgaacttaaaatgttggtttttgcttataatagtgatcgga 50308766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 8397045 - 8396997
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||  ||| |||||| ||||||| |||||||||||||||    
T  8397045 atcatttaataaataaatttaaaatattgatttctgtttataataatga 8396997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 8466007 - 8466059
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||| |||||| ||||||||||||   | ||||||||||||||||||    
T  8466007 atacatcattaaataaatgaatctaaaatgcaaagttttgtttataataatga 8466059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 10831130 - 10831082
Alignment:
Q  19 tttaataaaagaatctaaaatgttgatttttgtttataataatgatcgg 67  Q
    ||||||||| |||| ||||| ||||||||||  ||||||||||||||||    
T  10831130 tttaataaatgaatttaaaacgttgatttttacttataataatgatcgg 10831082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11324504 - 11324580
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    ||||||| |||||||||||| | | || |||| ||||||||| |||||| |||||| || |||||||| | ||||||    
T  11324504 taaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatcggagattgtatt 11324580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11482525 - 11482601
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    ||||||| |||||||||||| | | || |||| ||||||||| |||||| |||||| || |||||||| | ||||||    
T  11482525 taaagaccatatacatcattaattgaatgaatttaaaatgttaatttttatttatattagtgatcggagattgtatt 11482601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 27068837 - 27068785
Alignment:
Q  13 acatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||| ||||||||||  ||||||||||||||||||||  |||||||| |||||    
T  27068837 acattatttaataaataaatctaaaatgttgatttttacttataatagtgatc 27068785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 29043520 - 29043456
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||| ||||||| | || ||| |||||| ||||||||||| |||||||||||| ||||    
T  29043520 agactaaatacgtcatttattgaatgaacctaaaaagttgatttttgcttataataatgagcgga 29043456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 34953955 - 34953907
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||| |||||| |||||||||| ||||||||    
T  34953955 atacatcatttaatgaatgaatttaaaatattgatttttgcttataata 34953907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 7484698 - 7484750
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  7484698 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataataatga 7484750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9930950 - 9931017
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaag 71  Q
    |||||||||||||||| |||| || ||||||||||| || |||||||||||||||||| |||| ||||    
T  9930950 agactatatacatcatctaattaatgaatctaaaatatttatttttgtttataataataatcgaaaag 9931017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11295733 - 11295658
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    ||||||| | |||||||||||||| || | |||||||||||||||||||| |||||||| ||| ||||| ||||||    
T  11295733 taaagaccacatacatcatttaatgaatgtatctaaaatgttgatttttgcttataatagtgaccggaaggtgtat 11295658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 10934684 - 10934741
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||| ||| ||||    
T  10934684 atacatcatttaatgaatgaatctaaaatgttgatttttgcttataatagtgaccgga 10934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 92824 - 92752
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtat 76  Q
    |||||| |||||| ||| ||| || ||||||||| ||||||||||||||||||||| |||||| | |||||||    
T  92824 agactacatacattattaaatgaatgaatctaaattgttgatttttgtttataatagtgatcgaatagtgtat 92752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 2296540 - 2296476
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||| |||||||||||||||| || |||||||||||||  | ||||| |||||||||||||||||    
T  2296540 agaccatatacatcatttaatgaatgaatctaaaatgtaaaattttgcttataataatgatcgga 2296476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 10335227 - 10335271
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  10335227 atcatttaataaatgaatctaaaatattgatttttgtttataata 10335271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6189708 - 6189763
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||| |||||||||||| | || |||||||||| ||||||||||||||||||||    
T  6189708 agactaaatacatcatttattgaatgaatctaaaacgttgatttttgtttataata 6189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13080157 - 13080110
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttt 48  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  13080157 taaagactacatacatcatttaatgaatgaatctaaaatgttgatttt 13080110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 27518386 - 27518453
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||| | ||||||| ||| || ||||||||||||| ||||||||||||||||| ||| ||||    
T  27518386 taaagactatgtgcatcattaaatgaatgaatctaaaatgtagatttttgtttataatagtgaccgga 27518453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 27502960 - 27502903
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||| ||||||||| ||||||| |||||||| ||||||||    
T  27502960 atacatcatttaatgaatgaatttaaaatgttaatttttgcttataatagtgatcgga 27502903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 44319603 - 44319676
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||| |||||||||||||||||  | |||||||| || ||||||| |||||||| ||||||||  |||||||    
T  44319603 agactacatacatcatttaataaattattctaaaatattaatttttgcttataatagtgatcggatggtgtatt 44319676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17871822 - 17871770
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||| || ||| |||||| ||||||||||| ||||||||||||    
T  17871822 atacatcatttaatgaatgaacctaaaaagttgatttttgcttataataatga 17871770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 17986268 - 17986332
Alignment:
Q  4 agactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||| |||||||||||||| || ||| |||||| ||||||||||  |||||||| ||||||||    
T  17986268 agactaaatacatcatttaatgaatgaacctaaaaagttgatttttacttataatagtgatcgga 17986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 24017799 - 24017847
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  24017799 atacatcatttaattaataaatctaaaatgttgatttttgcttataata 24017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 25268030 - 25267982
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||| | |||| ||||||||||||| |||||||||||||||||||||    
T  25268030 atcattaattaaatgaatctaaaatgtagatttttgtttataataatga 25267982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45045448 - 45045512
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    ||||||| |||||||||||| | | || ||||||||||| | ||||||||||||||||| |||||    
T  45045448 taaagaccatatacatcattaattgaatgaatctaaaatatagatttttgtttataatagtgatc 45045512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24471253 - 24471186
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||| ||||||||||| || || | || ||||||||||||||||| |||||||| ||| ||||    
T  24471253 taaagactacatacatcattttatgaatgtatttaaaatgttgatttttgcttataatagtgaccgga 24471186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 24842088 - 24842143
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcg 66  Q
    |||||||||||||||||  |||||||||| | ||||||| ||||||||||| ||||    
T  24842088 atacatcatttaataaataaatctaaaatatcgatttttatttataataataatcg 24842143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 3225861 - 3225927
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgtatt 77  Q
    |||||||||||||| || ||| | ||||| |||||||||| ||||||||||||| |||  |||||||    
T  3225861 atacatcatttaatgaatgaaccaaaaatattgatttttgcttataataatgattggatggtgtatt 3225927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 11295748 - 11295790
Alignment:
Q  14 catcatttaataaaagaatctaaaatgttgatttttgtttata 56  Q
    ||||||||||| || |||||||||||||| |||||||||||||    
T  11295748 catcatttaatgaatgaatctaaaatgttaatttttgtttata 11295790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13080159 - 13080221
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||| | |||||||||| | | || |||| |||||||| |||||||||||||||||||||    
T  13080159 taaagaccacatacatcattaattcaatgaatgtaaaatgtagatttttgtttataataatga 13080221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 18603539 - 18603593
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatc 65  Q
    |||||||||||||| ||  ||||||||||||| ||||||  ||||||||||||||    
T  18603539 atacatcatttaattaataaatctaaaatgttaatttttaattataataatgatc 18603593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27502972 - 27503034
Alignment:
Q  1 taaagactatatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    ||||||||| ||| || |||| || || | |||||||||||||||||||| ||||||||||||    
T  27502972 taaagactacatatattattttatgaatgtatctaaaatgttgatttttgcttataataatga 27503034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 44099033 - 44098999
Alignment:
Q  29 gaatctaaaatgttgatttttgtttataataatga 63  Q
    |||| ||||||||||||||||||||||||||||||    
T  44099033 gaatttaaaatgttgatttttgtttataataatga 44098999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 44319576 - 44319523
Alignment:
Q  15 atcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||| |||||||||||||| | ||||| |||||||| ||| ||||    
T  44319576 atcatttaataaatgaatctaaaatgttaacttttgcttataatagtgaccgga 44319523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 5888395 - 5888347
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||||||||| ||| ||||||| ||||||||    
T  5888395 atacatcatttaatgaatgaatctaaaacgttaatttttgcttataata 5888347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 13964478 - 13964430
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||| | || |||| ||||||||||||||||| ||||||||    
T  13964478 atacatcatttattgaatgaatttaaaatgttgatttttgcttataata 13964430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 24471271 - 24471315
Alignment:
Q  24 taaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||| |||||||||||||| |||||||||||||||| ||| ||||    
T  24471271 taaatgaatctaaaatgttaatttttgtttataatagtgaccgga 24471315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 33385230 - 33385182
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    ||||||||||||| |||  ||||||||||||| |||||| |||||||||    
T  33385230 atacatcatttaaaaaataaatctaaaatgttaatttttatttataata 33385182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 35874546 - 35874609
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcggaaagtgta 75  Q
    |||||||||||||| || |||| ||||| ||||||||||  |||||||| |||||||| ||||||    
T  35874546 atacatcatttaattaatgaatgtaaaa-gttgatttttccttataatagtgatcggatagtgta 35874609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 41753817 - 41753769
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| || |||| ||||||||||| ||||| ||||||||    
T  41753817 atacatcatttaatgaatgaatttaaaatgttgaattttgcttataata 41753769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 146027 - 145970
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||| ||| ||||    
T  146027 atacatcatttaatgaatgaatctaaaatgatgatttttgtttataatagtgaccgga 145970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 741 - 797
Alignment:
Q  12 tacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    ||||||||||||| || ||||||||||| || ||||| |||||||||| ||||||||    
T  741 tacatcatttaatgaatgaatctaaaatattaattttagtttataatagtgatcgga 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 40512 - 40464
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataata 59  Q
    |||||||||||||| ||  |||||||||||||||||||| |||||||||    
T  40512 atacatcatttaatgaataaatctaaaatgttgatttttatttataata 40464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 88917 - 88863
Alignment:
Q  9 atatacatcatttaataaaagaatctaaaatgttgatttttgtttataataatga 63  Q
    |||||||||||||||||||  ||||||||||| ||||||||  |||||| |||||    
T  88917 atatacatcatttaataaataaatctaaaatgatgatttttacttataacaatga 88863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 24687 - 24744
Alignment:
Q  11 atacatcatttaataaaagaatctaaaatgttgatttttgtttataataatgatcgga 68  Q
    |||||||||||||| || ||||||||||| || ||||||| |||||||| ||| ||||    
T  24687 atacatcatttaatgaatgaatctaaaatattaatttttgcttataatagtgaccgga 24744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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