View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1707_low_11 (Length: 414)

Name: NF1707_low_11
Description: NF1707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1707_low_11
NF1707_low_11
[»] chr1 (29 HSPs)
chr1 (136-405)||(45682755-45683024)
chr1 (18-99)||(45682636-45682717)
chr1 (27-76)||(45286250-45286299)
chr1 (37-72)||(17191220-17191255)
chr1 (27-72)||(5586734-5586779)
chr1 (27-72)||(9877650-9877695)
chr1 (27-76)||(32694555-32694604)
chr1 (27-72)||(40770387-40770432)
chr1 (27-72)||(40934665-40934710)
chr1 (27-72)||(49021689-49021734)
chr1 (27-72)||(49021913-49021958)
chr1 (52-87)||(4151461-4151496)
chr1 (27-94)||(5618318-5618385)
chr1 (37-72)||(6488893-6488928)
chr1 (37-76)||(50312024-50312063)
chr1 (27-72)||(731046-731091)
chr1 (27-72)||(4695183-4695228)
chr1 (27-72)||(5618093-5618138)
chr1 (39-76)||(8828839-8828876)
chr1 (27-72)||(8853342-8853387)
chr1 (27-72)||(10296614-10296659)
chr1 (27-72)||(12649944-12649989)
chr1 (27-72)||(17504290-17504335)
chr1 (27-72)||(28554212-28554257)
chr1 (27-72)||(31289276-31289321)
chr1 (27-72)||(34480206-34480251)
chr1 (27-76)||(40770158-40770207)
chr1 (27-71)||(12650169-12650213)
chr1 (28-72)||(26095510-26095554)
[»] chr7 (34 HSPs)
chr7 (27-76)||(41749827-41749876)
chr7 (27-76)||(2699864-2699913)
chr7 (27-76)||(7149538-7149587)
chr7 (18-87)||(7282224-7282293)
chr7 (27-72)||(11338139-11338184)
chr7 (27-76)||(21733315-21733364)
chr7 (39-72)||(31115859-31115892)
chr7 (27-72)||(43575084-43575129)
chr7 (27-72)||(45055344-45055389)
chr7 (27-72)||(45867692-45867737)
chr7 (27-72)||(47221729-47221774)
chr7 (27-95)||(38494913-38494981)
chr7 (37-72)||(8522569-8522604)
chr7 (27-72)||(7149313-7149358)
chr7 (27-72)||(8805766-8805811)
chr7 (27-72)||(8805991-8806036)
chr7 (27-72)||(8949314-8949359)
chr7 (27-72)||(12423867-12423912)
chr7 (27-72)||(21733090-21733135)
chr7 (27-72)||(24331401-24331446)
chr7 (27-72)||(34287764-34287809)
chr7 (27-72)||(38495161-38495206)
chr7 (27-72)||(41922304-41922349)
chr7 (27-72)||(42391318-42391363)
chr7 (27-72)||(43575297-43575342)
chr7 (27-72)||(44458031-44458076)
chr7 (27-72)||(45055569-45055614)
chr7 (27-72)||(45062309-45062354)
chr7 (27-72)||(47221942-47221987)
chr7 (27-71)||(11337915-11337959)
chr7 (27-71)||(28588340-28588384)
chr7 (27-75)||(34287535-34287583)
chr7 (27-71)||(45062085-45062129)
chr7 (27-71)||(46426684-46426728)
[»] chr6 (21 HSPs)
chr6 (27-72)||(13853164-13853209)
chr6 (27-72)||(8129780-8129825)
chr6 (27-76)||(12240728-12240777)
chr6 (27-72)||(21926086-21926131)
chr6 (43-76)||(25121544-25121577)
chr6 (28-76)||(20028021-20028069)
chr6 (37-76)||(24335551-24335590)
chr6 (27-72)||(684975-685020)
chr6 (27-76)||(685200-685249)
chr6 (27-72)||(2316736-2316781)
chr6 (27-72)||(2882905-2882950)
chr6 (43-76)||(3011930-3011963)
chr6 (27-76)||(3105622-3105671)
chr6 (27-72)||(9899217-9899262)
chr6 (27-72)||(9899442-9899487)
chr6 (27-76)||(11361807-11361856)
chr6 (27-72)||(11362027-11362072)
chr6 (27-72)||(22568785-22568830)
chr6 (27-75)||(9220350-9220398)
chr6 (27-71)||(21926311-21926355)
chr6 (27-71)||(24325015-24325059)
[»] chr4 (20 HSPs)
chr4 (27-72)||(16530340-16530385)
chr4 (27-72)||(10993647-10993692)
chr4 (27-72)||(32922089-32922134)
chr4 (27-72)||(46648091-46648136)
chr4 (27-71)||(39791940-39791984)
chr4 (27-78)||(17040157-17040208)
chr4 (37-72)||(39792176-39792211)
chr4 (37-76)||(45655711-45655750)
chr4 (27-72)||(9902675-9902720)
chr4 (27-72)||(9902903-9902948)
chr4 (27-72)||(20984161-20984206)
chr4 (27-72)||(32922314-32922359)
chr4 (27-72)||(35131043-35131088)
chr4 (27-76)||(41935511-41935560)
chr4 (27-72)||(44551162-44551207)
chr4 (27-72)||(52537901-52537946)
chr4 (27-72)||(52538126-52538171)
chr4 (27-72)||(52654179-52654224)
chr4 (27-71)||(26843046-26843090)
chr4 (37-69)||(49498696-49498728)
[»] chr3 (26 HSPs)
chr3 (27-87)||(25061308-25061368)
chr3 (37-87)||(25061535-25061585)
chr3 (27-72)||(11221239-11221284)
chr3 (27-72)||(31574500-31574545)
chr3 (27-87)||(32809161-32809221)
chr3 (37-72)||(21017182-21017217)
chr3 (37-71)||(2397809-2397843)
chr3 (26-72)||(35220591-35220637)
chr3 (37-71)||(36546125-36546159)
chr3 (37-71)||(36562155-36562189)
chr3 (27-72)||(6954244-6954289)
chr3 (27-68)||(13997164-13997205)
chr3 (27-72)||(14463370-14463415)
chr3 (27-72)||(18169001-18169046)
chr3 (27-72)||(20209172-20209217)
chr3 (27-72)||(29434323-29434368)
chr3 (27-72)||(35415489-35415534)
chr3 (37-74)||(39778300-39778337)
chr3 (27-72)||(44664643-44664688)
chr3 (27-72)||(44920145-44920190)
chr3 (27-72)||(45171600-45171645)
chr3 (27-72)||(46292604-46292649)
chr3 (27-72)||(50710725-50710770)
chr3 (27-72)||(50711242-50711287)
chr3 (27-71)||(2773392-2773436)
chr3 (27-71)||(29434548-29434592)
[»] chr5 (25 HSPs)
chr5 (28-87)||(7370996-7371055)
chr5 (27-72)||(1099139-1099184)
chr5 (27-72)||(16737050-16737095)
chr5 (27-76)||(31485975-31486024)
chr5 (27-95)||(19130869-19130937)
chr5 (27-71)||(33429556-33429600)
chr5 (37-72)||(3168337-3168372)
chr5 (37-72)||(7601850-7601885)
chr5 (37-76)||(7610519-7610558)
chr5 (27-73)||(3974234-3974280)
chr5 (37-75)||(17760018-17760056)
chr5 (37-71)||(30129498-30129532)
chr5 (27-72)||(1643561-1643606)
chr5 (27-72)||(7601615-7601660)
chr5 (27-72)||(14871756-14871801)
chr5 (27-72)||(16736823-16736868)
chr5 (27-72)||(19131117-19131162)
chr5 (27-72)||(33381451-33381496)
chr5 (27-72)||(33381675-33381720)
chr5 (27-72)||(33429780-33429825)
chr5 (27-72)||(39589637-39589682)
chr5 (47-83)||(2876405-2876441)
chr5 (39-87)||(27337842-27337890)
chr5 (27-71)||(32772014-32772058)
chr5 (27-71)||(42611028-42611072)
[»] chr8 (21 HSPs)
chr8 (38-76)||(33278953-33278991)
chr8 (27-72)||(17494970-17495015)
chr8 (27-72)||(26938208-26938253)
chr8 (27-72)||(30253648-30253693)
chr8 (27-87)||(148300-148360)
chr8 (27-87)||(42685035-42685095)
chr8 (27-72)||(8156955-8157000)
chr8 (27-72)||(18805768-18805813)
chr8 (27-72)||(27713011-27713056)
chr8 (27-72)||(28828238-28828283)
chr8 (27-72)||(29596424-29596469)
chr8 (27-72)||(33279185-33279230)
chr8 (27-72)||(34632472-34632517)
chr8 (27-72)||(36556782-36556827)
chr8 (27-76)||(40277240-40277289)
chr8 (27-72)||(41617287-41617332)
chr8 (28-72)||(21660748-21660792)
chr8 (27-71)||(24419465-24419509)
chr8 (27-71)||(26187375-26187419)
chr8 (27-71)||(34198858-34198902)
chr8 (27-71)||(36556558-36556602)
[»] chr2 (19 HSPs)
chr2 (27-72)||(1479050-1479095)
chr2 (27-72)||(10714255-10714300)
chr2 (27-76)||(28788885-28788934)
chr2 (27-72)||(30488102-30488147)
chr2 (27-75)||(11122663-11122711)
chr2 (37-72)||(31557005-31557040)
chr2 (43-78)||(41537496-41537531)
chr2 (27-72)||(341334-341379)
chr2 (27-72)||(1650525-1650570)
chr2 (43-72)||(10192106-10192135)
chr2 (27-72)||(15461502-15461547)
chr2 (27-72)||(23926413-23926458)
chr2 (27-72)||(23926638-23926683)
chr2 (27-72)||(26499658-26499703)
chr2 (27-72)||(28789114-28789159)
chr2 (27-72)||(30488327-30488372)
chr2 (27-72)||(35412124-35412169)
chr2 (27-72)||(42950756-42950801)
chr2 (29-69)||(21251807-21251847)
[»] scaffold0592 (1 HSPs)
scaffold0592 (27-76)||(8635-8684)


Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 136 - 405
Target Start/End: Original strand, 45682755 - 45683024
Alignment:
Q  136 gtaggggtaggggtgcgtaaaagggtaacttggtcttgtaataatcccatcatgaatgaatctggggaagggttgcacccattatggatctatgttaggt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682755 gtaggggtaggggtgcgtaaaagggtaacttggtcttgtaataatcccatcatgaatgaatctggggaagggttgcacccattatggatctatgttaggt 45682854  T
Q  236 ttcctttacatctagaaaaagctaattccactactcaaacctttagatgaattaaatttgacttaagtttgaactcccagtattttgtatattttatata 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45682855 ttcctttacatctagaaaaagctaattccactactcaaacctttagatgaattaaatttgacttaagtttgaactcccagtattttgtatattttatata 45682954  T
Q  336 atatatcgtaataagttaaaccgaggaatctgttccttttggatgaactgagaagcaattgtagtattat 405  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  45682955 atatatcgtaataagttaaaccaaggaatctgttccttttggatgaactgagaagcaattgtagtattat 45683024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 45682636 - 45682717
Alignment:
Q  18 aaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcctctgc 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45682636 aaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaatgttgcctctgc 45682717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 45286299 - 45286250
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  45286299 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaagagac 45286250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 17191255 - 17191220
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||||||||||||||||||||||||||    
T  17191255 ataaatgaccaaattgttacctgaaattaagttaag 17191220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 5586734 - 5586779
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  5586734 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 5586779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 9877650 - 9877695
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  9877650 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 9877695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 32694555 - 32694604
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  32694555 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 32694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40770387 - 40770432
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  40770387 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 40770432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 40934665 - 40934710
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  40934665 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 40934710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 49021734 - 49021689
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  49021734 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 49021689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 49021913 - 49021958
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  49021913 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 49021958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 4151461 - 4151496
Alignment:
Q  52 gttacctgaaattaagttaagagaccacaagagtaa 87  Q
    |||||||||||||| |||||||||||||||||||||    
T  4151461 gttacctgaaattatgttaagagaccacaagagtaa 4151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 5618318 - 5618385
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcc 94  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| |||||    
T  5618318 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcc 5618385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 6488928 - 6488893
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6488928 ataaatgaccaaactgttacctgaaattaagttaag 6488893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 50312063 - 50312024
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  50312063 ataaatgaccaaactgttacctgaaattaaattaagagac 50312024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 731046 - 731091
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||||    
T  731046 tgaaaaaatgataaaggactaaattattacctgaaattaagttaag 731091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 4695183 - 4695228
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  4695183 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 4695228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 5618138 - 5618093
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  5618138 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 5618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 8828839 - 8828876
Alignment:
Q  39 aaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  8828839 aaatgactaaactgttacctgaaattaagttaagagac 8828876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 8853342 - 8853387
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8853342 tgaaaaaaaaataaaggaccaaactgttacctgaaattaagttaag 8853387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 10296659 - 10296614
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  10296659 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 10296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 12649989 - 12649944
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  12649989 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 12649944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17504290 - 17504335
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  17504290 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 17504335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 28554257 - 28554212
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  28554257 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 28554212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 31289321 - 31289276
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  31289321 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 31289276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 34480251 - 34480206
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34480251 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 34480206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 40770207 - 40770158
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| |||| || ||||||||||||||||||||||||||    
T  40770207 tgaaaaaaagataaaagacccaactgttacctgaaattaagttaagagac 40770158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 12650169 - 12650213
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  12650169 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 12650213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 26095554 - 26095510
Alignment:
Q  28 gaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  26095554 gaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 26095510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 41749827 - 41749876
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  41749827 tgaaaaaaagataaatgaccaaattgttacctgaaattaagctaagagac 41749876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 2699864 - 2699913
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  2699864 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 2699913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 7149538 - 7149587
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||||||||||| ||||| ||||||||||||||||||||    
T  7149538 tgaaaaaaagataaatgaccaaactgttatctgaaattaagttaagagac 7149587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 7282224 - 7282293
Alignment:
Q  18 aaaaggacgtgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    |||| ||||||||||||  |||| |||| ||||||||| | |||||||||||||||||| ||||| ||||    
T  7282224 aaaatgacgtgaaaaaaagataattgacaaaattgttatcagaaattaagttaagagacaacaagtgtaa 7282293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 11338139 - 11338184
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  11338139 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 11338184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 21733315 - 21733364
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||| ||||||||||||||||||||||||||||||    
T  21733315 tgaaaaaaagataaaggacgaaattgttacctgaaattaagttaagagac 21733364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 31115892 - 31115859
Alignment:
Q  39 aaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||||||||||||||||||||||||    
T  31115892 aaatgaccaaattgttacctgaaattaagttaag 31115859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 43575129 - 43575084
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  43575129 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 43575084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 45055389 - 45055344
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  45055389 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 45055344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 45867692 - 45867737
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  45867692 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 45867737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 47221774 - 47221729
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  47221774 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 47221729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 38494981 - 38494913
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcct 95  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| ||||||    
T  38494981 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcct 38494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 8522569 - 8522604
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8522569 ataaaggaccaaattgttacctgaaattaagttaag 8522604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 7149358 - 7149313
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  7149358 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 7149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 8805811 - 8805766
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8805811 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8805766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 8805991 - 8806036
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8805991 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8806036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 8949359 - 8949314
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8949359 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8949314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 12423912 - 12423867
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  12423912 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 12423867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 21733135 - 21733090
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  21733135 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 21733090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 24331446 - 24331401
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  24331446 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 24331401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 34287764 - 34287809
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34287764 tgaaaaaaagataaaggaccaaagtgttacctgaaattaagttaag 34287809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 38495161 - 38495206
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  38495161 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 38495206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 41922349 - 41922304
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  41922349 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 41922304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 42391363 - 42391318
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  42391363 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 42391318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 43575297 - 43575342
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  43575297 tgaaaaaaagataaaggaccaaaatgttacctgaaattaagttaag 43575342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 44458031 - 44458076
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  44458031 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 44458076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 45055569 - 45055614
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  45055569 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 45055614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 45062309 - 45062354
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  45062309 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 45062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 47221942 - 47221987
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  47221942 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 47221987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 11337959 - 11337915
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| |||||||||||||| ||||||||||||||    
T  11337959 tgaaaaaaagataaaggaccaaattgttacatgaaattaagttaa 11337915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 28588384 - 28588340
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  28588384 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaa 28588340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 34287583 - 34287535
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 75  Q
    ||||||||  ||||| ||||||| |||||||| ||||||||||||||||    
T  34287583 tgaaaaaaagataaaggaccaaactgttacctaaaattaagttaagaga 34287535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 45062129 - 45062085
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  45062129 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 45062085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 46426728 - 46426684
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| |||||||||||||||| ||||||||||||    
T  46426728 tgaaaaaaagataaaggaccaaattgttacctaaaattaagttaa 46426684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 13853209 - 13853164
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  13853209 tgaaaaaaagataaatgaccaaattgttacctgaaattaagttaag 13853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 8129780 - 8129825
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  8129780 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 8129825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 12240728 - 12240777
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  12240728 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 12240777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 21926131 - 21926086
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||    
T  21926131 tgaaaaaaatataaaggaccaaactgttacctgaaattaagttaag 21926086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 25121577 - 25121544
Alignment:
Q  43 gaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||||||||||||||||||||||||||||    
T  25121577 gaccaaattgttacctgaaattaagttaagagac 25121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 20028021 - 20028069
Alignment:
Q  28 gaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  20028021 gaaaaaaagataaaagaccaaactgttacctgaaattaagttaagagac 20028069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 24335590 - 24335551
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  24335590 ataaaggaccaaattgttacctgaaattaaattaagagac 24335551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 685020 - 684975
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  685020 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaag 684975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 685200 - 685249
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||| ||| ||||||||||||||||||||||||||    
T  685200 tgaaaaaaagataaaggactaaactgttacctgaaattaagttaagagac 685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 2316736 - 2316781
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  2316736 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 2316781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 2882950 - 2882905
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  2882950 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 2882905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 3011963 - 3011930
Alignment:
Q  43 gaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||| ||||||||||||||||||||||||||    
T  3011963 gaccaaactgttacctgaaattaagttaagagac 3011930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 3105671 - 3105622
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| |||||||  |||||||||||||||||||||||||    
T  3105671 tgaaaaaaagataaaggaccaaacagttacctgaaattaagttaagagac 3105622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 9899262 - 9899217
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9899262 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9899217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 9899442 - 9899487
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9899442 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 11361856 - 11361807
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||||||| ||| |||||||||||||||| |||||||||    
T  11361856 tgaaaaaaagataaatgactaaactgttacctgaaattaaattaagagac 11361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 11362027 - 11362072
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||||||    
T  11362027 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaag 11362072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 22568830 - 22568785
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  22568830 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 22568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 9220350 - 9220398
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 75  Q
    ||||||||  ||||| ||||||| | |||||||||||||||||||||||    
T  9220350 tgaaaaaaagataaaagaccaaactcttacctgaaattaagttaagaga 9220398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 21926311 - 21926355
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  21926311 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 21926355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 24325059 - 24325015
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| | |||||||||||||||||||||||||||    
T  24325059 tgaaaaaaagataaagggccaaattgttacctgaaattaagttaa 24325015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 16530385 - 16530340
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||    
T  16530385 tgaaaaaaagataaatgaccaaattgttacctgaaattaagttaag 16530340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 10993692 - 10993647
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  10993692 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 10993647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 32922134 - 32922089
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  32922134 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 32922089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 46648136 - 46648091
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  46648136 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 46648091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 39791984 - 39791940
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||    
T  39791984 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaa 39791940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 17040157 - 17040208
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagacca 78  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||| |||||    
T  17040157 tgaaaaaaagataaaggaccaaattgttaactgaaattaagttaagggacca 17040208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 39792176 - 39792211
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39792176 ataaaggaccaaattgttacctgaaattaagttaag 39792211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 45655750 - 45655711
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  45655750 ataaaagacaaaattgttacctgaaattaagttaagagac 45655711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 9902720 - 9902675
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9902720 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9902675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 9902903 - 9902948
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  9902903 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 9902948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 20984161 - 20984206
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  20984161 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 20984206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 32922314 - 32922359
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  32922314 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 32922359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 35131043 - 35131088
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35131043 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 35131088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 41935560 - 41935511
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| |||| || ||||||||||||||||||||||||||    
T  41935560 tgaaaaaaagataaaggaccgaactgttacctgaaattaagttaagagac 41935511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 44551162 - 44551207
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  44551162 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 44551207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 52537946 - 52537901
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52537946 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 52538126 - 52538171
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52538126 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52538171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 52654179 - 52654224
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  52654179 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 52654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 26843046 - 26843090
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  26843046 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 26843090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 49498696 - 49498728
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagtt 69  Q
    ||||| |||||||||||||||||||||||||||    
T  49498696 ataaaggaccaaattgttacctgaaattaagtt 49498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 25061368 - 25061308
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||| ||||| ||| ||||    
T  25061368 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaagggaccaaaagtgtaa 25061308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 25061535 - 25061585
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  25061535 ataaaggaccaaactgttacctgaaattaagttaagagaccaaaagtgtaa 25061585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 11221239 - 11221284
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  11221239 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 11221284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 31574500 - 31574545
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  31574500 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 31574545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 32809221 - 32809161
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||||||  ||||| |||||||||||||||||||||||| ||||| ||||| ||| ||||    
T  32809221 tgaaaaaaagataaaggaccaaattgttacctgaaattaaattaagggaccaaaagtgtaa 32809161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 21017182 - 21017217
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||| ||||||||||||||||||||||    
T  21017182 ataaatgaccaaactgttacctgaaattaagttaag 21017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 2397843 - 2397809
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||| |||||||||||||||||||||||||    
T  2397843 ataaatgacaaaattgttacctgaaattaagttaa 2397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 35220637 - 35220591
Alignment:
Q  26 gtgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    |||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  35220637 gtgaaaaaaagataaatgacgaaattgttatctgaaattaagttaag 35220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 36546159 - 36546125
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||| |||||||||||||||||||||||||||||    
T  36546159 ataaaggaccaaattgttacctgaaattaagttaa 36546125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Original strand, 36562155 - 36562189
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||| |||||||||||||||||||||||||||||    
T  36562155 ataaaggaccaaattgttacctgaaattaagttaa 36562189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 6954244 - 6954289
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||||||||| || |||||||||||||    
T  6954244 tgaaaaaaagataaatgaccaaattgttatctaaaattaagttaag 6954289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 13997164 - 13997205
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagt 68  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  13997164 tgaaaaaaagataaaggaccaaattgttacctgaaattaagt 13997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 14463370 - 14463415
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  14463370 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 14463415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 18169001 - 18169046
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||| ||||||||||||||||    
T  18169001 tgaaaaaaagataaatgaccaaactgttatctgaaattaagttaag 18169046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 20209217 - 20209172
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  20209217 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 20209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 29434368 - 29434323
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||    
T  29434368 tgaaaaaaagataaaggatcaaattgttacctgaaattaagttaag 29434323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 35415489 - 35415534
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35415489 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 35415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 39778337 - 39778300
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagag 74  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  39778337 ataaatgactaaactgttacctgaaattaagttaagag 39778300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 44664688 - 44664643
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||| ||||||||||||||||||||||||||    
T  44664688 tgaaaaaaagataaaggactaaattgttacctgaaattaagttaag 44664643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 44920145 - 44920190
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| |||||||||||| |||||||||||||||||    
T  44920145 tgaaaaaaagataaaggaccaaattgttgcctgaaattaagttaag 44920190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 45171645 - 45171600
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||| ||||||||||||||    
T  45171645 tgaaaaaaagataaaggaccaaattgttacccgaaattaagttaag 45171600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 46292649 - 46292604
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  46292649 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 46292604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 50710770 - 50710725
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  50710770 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 50710725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 50711242 - 50711287
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  50711242 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 50711287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 2773392 - 2773436
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| |||||| ||||||||||||||||||||||    
T  2773392 tgaaaaaaagataaaggaccaagttgttacctgaaattaagttaa 2773436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 29434548 - 29434592
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  29434548 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 29434592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 7371055 - 7370996
Alignment:
Q  28 gaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||| ||||||| ||||||    
T  7371055 gaaaaaaagataaatgactaaattgttacctaaaattaagttaagggaccacaggagtaa 7370996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 1099139 - 1099184
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  1099139 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 1099184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 16737050 - 16737095
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||    
T  16737050 tgaaaaaaagataaatgaccaaattattacctgaaattaagttaag 16737095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31486024 - 31485975
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  31486024 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 31485975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 19130937 - 19130869
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaacgttgcct 95  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||| ||| | ||| ||||| ||||||    
T  19130937 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaactttgcct 19130869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 33429600 - 33429556
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||    
T  33429600 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaa 33429556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 3168337 - 3168372
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    |||||| |||||||||||||||||||||||||||||    
T  3168337 ataaataaccaaattgttacctgaaattaagttaag 3168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 7601850 - 7601885
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||| ||||||||||||||||||||||    
T  7601850 ataaatgaccaaactgttacctgaaattaagttaag 7601885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 7610519 - 7610558
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  7610519 ataaaggaccaaactgttacctgaaattaagttaagagac 7610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 3974280 - 3974234
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaaga 73  Q
    ||||||||  ||||| ||||||||||||| |||||||||||||||||    
T  3974280 tgaaaaaaagataaaggaccaaattgttatctgaaattaagttaaga 3974234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 75
Target Start/End: Original strand, 17760018 - 17760056
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaagaga 75  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  17760018 ataaataaccaaattgttacctaaaattaagttaagaga 17760056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 30129532 - 30129498
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||| |||||||||||||||||||||||||||||    
T  30129532 ataaaagaccaaattgttacctgaaattaagttaa 30129498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1643606 - 1643561
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  1643606 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 1643561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 7601660 - 7601615
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  7601660 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 7601615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 14871801 - 14871756
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  14871801 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 14871756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 16736868 - 16736823
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  16736868 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 16736823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 19131117 - 19131162
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  19131117 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 19131162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 33381496 - 33381451
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33381496 tgaaaaaaagataaaagaccaaactgttacctgaaattaagttaag 33381451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 33381675 - 33381720
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33381675 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 33429780 - 33429825
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33429780 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33429825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 39589682 - 39589637
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  39589682 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 39589637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 2876405 - 2876441
Alignment:
Q  47 aaattgttacctgaaattaagttaagagaccacaaga 83  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  2876405 aaattgttatctgaaattaagttaagaaaccacaaga 2876441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 27337890 - 27337842
Alignment:
Q  39 aaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||| ||||    
T  27337890 aaatgactaaattgttatttgaaattaagttaagagactacaagtgtaa 27337842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 32772058 - 32772014
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  32772058 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 32772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 42611028 - 42611072
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  42611028 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 42611072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 33278991 - 33278953
Alignment:
Q  38 taaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33278991 taaaagaccaaattgttacctgaaattaagttaagagac 33278953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 17494970 - 17495015
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  17494970 tgaaaaaaagataaatgaccaaaatgttacctgaaattaagttaag 17495015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 26938253 - 26938208
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||    
T  26938253 tgaaaaaaagataaaggaccaaattgttacctgaaattaagttaag 26938208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 30253693 - 30253648
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  30253693 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 30253648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 148360 - 148300
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||||||  ||||| |||||||||||||||| ||||||||||||| ||||| ||| ||||    
T  148360 tgaaaaaaagataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaa 148300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 42685035 - 42685095
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagaccacaagagtaa 87  Q
    ||||||||  ||||| |||||||||||||| | ||||||||||||||||| | ||||||||    
T  42685035 tgaaaaaaagataaaggaccaaattgttacttaaaattaagttaagagactaaaagagtaa 42685095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 8156955 - 8157000
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  8156955 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 8157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 18805813 - 18805768
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  18805813 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 18805768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 27713011 - 27713056
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  27713011 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 27713056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 28828283 - 28828238
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| |||||||||||||| |||||||||||||||    
T  28828283 tgaaaaaaagataaaggaccaaattgttacttgaaattaagttaag 28828238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 29596469 - 29596424
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  29596469 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 29596424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 33279185 - 33279230
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  33279185 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33279230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 34632472 - 34632517
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  34632472 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 34632517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 36556782 - 36556827
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  36556782 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 36556827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 40277289 - 40277240
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| | ||||||||||||||||||||||||    
T  40277289 tgaaaaaaagataaaggaccaaactattacctgaaattaagttaagagac 40277240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 41617287 - 41617332
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  41617287 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 41617332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21660792 - 21660748
Alignment:
Q  28 gaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  21660792 gaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 21660748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 24419509 - 24419465
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    |||||||| |||||| ||||||||| |||||| ||||||||||||    
T  24419509 tgaaaaaaatataaaggaccaaattattacctaaaattaagttaa 24419465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 26187375 - 26187419
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  26187375 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa 26187419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 34198902 - 34198858
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||    
T  34198902 tgaaaaattgataaaggaccaaactgttacctgaaattaagttaa 34198858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 36556602 - 36556558
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaa 71  Q
    ||||||||  ||||| ||||||| |||||||||||||||||||||    
T  36556602 tgaaaaaaaaataaaggaccaaactgttacctgaaattaagttaa 36556558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1479095 - 1479050
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||||    
T  1479095 tgaaaaaaagataaatgaccaaattattacctgaaattaagttaag 1479050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 10714255 - 10714300
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||    
T  10714255 tgaaaaaaagataaatgaccaaactgttacctgaaattaagttaag 10714300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 28788934 - 28788885
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  28788934 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagagac 28788885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 30488147 - 30488102
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||    
T  30488147 tgaaaaaaagataaatgatcaaattgttacctgaaattaagttaag 30488102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 11122711 - 11122663
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagaga 75  Q
    |||||||  |||||| ||||||| |||||||||||||||||||||||||    
T  11122711 tgaaaaatatataaaggaccaaactgttacctgaaattaagttaagaga 11122663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 31557005 - 31557040
Alignment:
Q  37 ataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31557005 ataaatgaccaaactgttacctgaaattaagttaag 31557040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 41537531 - 41537496
Alignment:
Q  43 gaccaaattgttacctgaaattaagttaagagacca 78  Q
    |||||||||||||||||||||||||||||| |||||    
T  41537531 gaccaaattgttacctgaaattaagttaagggacca 41537496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 341379 - 341334
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  341379 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 341334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 1650570 - 1650525
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  1650570 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 1650525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 72
Target Start/End: Complemental strand, 10192135 - 10192106
Alignment:
Q  43 gaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||||||||||||||||||||||||    
T  10192135 gaccaaattgttacctgaaattaagttaag 10192106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 15461502 - 15461547
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  15461502 tgaaaaaaagataaatgactaaactgttacctgaaattaagttaag 15461547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 23926458 - 23926413
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  23926458 tgaaaaaaagataaatgacgaaactgttacctgaaattaagttaag 23926413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 23926638 - 23926683
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| || |||||||||||||||||||||||||||    
T  23926638 tgaaaaaaagataaaagatcaaattgttacctgaaattaagttaag 23926683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 26499658 - 26499703
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  26499658 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 26499703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 28789114 - 28789159
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  28789114 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 28789159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 30488327 - 30488372
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  30488327 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 30488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 35412124 - 35412169
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||||    
T  35412124 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 35412169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 42950756 - 42950801
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaag 72  Q
    ||||||||  ||||||||||||| |||||||||||||||| |||||    
T  42950756 tgaaaaaaagataaatgaccaaactgttacctgaaattaaattaag 42950801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 21251847 - 21251807
Alignment:
Q  29 aaaaaattataaatgaccaaattgttacctgaaattaagtt 69  Q
    |||||| |||||||||| ||| |||||||||||||||||||    
T  21251847 aaaaaaatataaatgacgaaagtgttacctgaaattaagtt 21251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 8635 - 8684
Alignment:
Q  27 tgaaaaaattataaatgaccaaattgttacctgaaattaagttaagagac 76  Q
    ||||||||  ||||| ||||||| ||||||||||||||||||||| ||||    
T  8635 tgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaagac 8684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University