View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1707_low_35 (Length: 252)
Name: NF1707_low_35
Description: NF1707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1707_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 34548319 - 34548091
Alignment:
| Q |
1 |
ttggtgaatctaaacttttactaatgccaagagtttcatatttaatgagataaagcatatagataactttataaatgggaccgtgcaagtcatcgccata |
100 |
Q |
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| T |
34548319 |
ttggtgaatctgaacttttactgatgctaagagtttcacatttaatgagataaagcatatagataactttataaatgggaccgtgcaagtcatcgccata |
34548220 |
T |
|
| Q |
101 |
ttaatcagatttataaggatgtgctaaactaaatataaaaagtctaatatggtattagaactatctcttaagggtcgtccacaatttatattcacgcacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
34548219 |
ttaatcagatttataaggatgtgctaaactaaatataaaaagtctaatatggtattagaactatctcttaagggtcgtccacaatttatattcacgtacc |
34548120 |
T |
|
| Q |
201 |
aaatctaaaagtcatgagcacaacaagagat |
231 |
Q |
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|||||| ||||||||||||||||||||||| |
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| T |
34548119 |
aaatct--aagtcatgagcacaacaagagat |
34548091 |
T |
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