View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1707_low_41 (Length: 245)
Name: NF1707_low_41
Description: NF1707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1707_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 33 - 231
Target Start/End: Complemental strand, 8813349 - 8813151
Alignment:
| Q |
33 |
tatgttgataaggtcattcattagttccagctgtattgaaaaataagagtgaagacaaagcaagttgaacatgagagaatatccgacacttgataaatct |
132 |
Q |
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| T |
8813349 |
tatgttgataaggtcattcattagttccagctgtattgaaaaataagagtgaagaaaaaggaagttgaacatgagagaatatccgacacttgataaatct |
8813250 |
T |
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| Q |
133 |
ggtgcattctttaataataagtgcttgagtattcgctttagtgaggattcatgtttttagaggctactattatttatttgcttcaattgattgaccttg |
231 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8813249 |
ggtgcattctttaataataagtgcttaagtattcgctttagtgaggattcatgtttttagaggctactattatttatttgcttcaattgattgaccttg |
8813151 |
T |
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