View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17080_high_10 (Length: 492)

Name: NF17080_high_10
Description: NF17080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17080_high_10
NF17080_high_10
[»] chr3 (51 HSPs)
chr3 (12-213)||(50100926-50101130)
chr3 (211-310)||(21654351-21654450)
chr3 (212-310)||(34022705-34022803)
chr3 (211-308)||(55400846-55400943)
chr3 (205-305)||(37323992-37324092)
chr3 (206-310)||(46580641-46580745)
chr3 (211-307)||(53020292-53020388)
chr3 (211-310)||(26641027-26641126)
chr3 (211-310)||(32322154-32322253)
chr3 (212-310)||(31126318-31126416)
chr3 (211-310)||(46295991-46296091)
chr3 (211-307)||(51426728-51426824)
chr3 (211-302)||(13541347-13541438)
chr3 (211-310)||(45347628-45347727)
chr3 (225-307)||(46820143-46820225)
chr3 (212-310)||(49068157-49068255)
chr3 (205-310)||(16739074-16739174)
chr3 (212-307)||(52252145-52252237)
chr3 (226-310)||(43576063-43576147)
chr3 (232-310)||(28793268-28793346)
chr3 (379-466)||(31126162-31126249)
chr3 (379-466)||(46580486-46580573)
chr3 (229-310)||(1335216-1335297)
chr3 (212-310)||(51255292-51255390)
chr3 (381-466)||(1335060-1335145)
chr3 (379-466)||(21654194-21654282)
chr3 (379-466)||(23513517-23513604)
chr3 (379-466)||(26641195-26641282)
chr3 (211-303)||(23514554-23514647)
chr3 (382-463)||(55400691-55400772)
chr3 (211-310)||(36188921-36189020)
chr3 (379-466)||(53020132-53020220)
chr3 (383-466)||(13541227-13541310)
chr3 (383-466)||(37324171-37324258)
chr3 (379-449)||(49068018-49068088)
chr3 (248-305)||(26724940-26724997)
chr3 (379-465)||(46820000-46820086)
chr3 (380-465)||(45781348-45781433)
chr3 (264-308)||(45781505-45781549)
chr3 (212-307)||(51309522-51309618)
chr3 (381-466)||(51426567-51426654)
chr3 (211-305)||(6075199-6075293)
chr3 (211-272)||(26208165-26208227)
chr3 (238-308)||(30612286-30612356)
chr3 (217-307)||(46303687-46303777)
chr3 (379-465)||(51255139-51255223)
chr3 (212-263)||(52171976-52172029)
chr3 (382-415)||(36189092-36189125)
chr3 (230-310)||(31292718-31292798)
chr3 (382-414)||(51309415-51309447)
chr3 (379-419)||(52172093-52172133)
[»] chr8 (52 HSPs)
chr8 (212-310)||(11044165-11044263)
chr8 (211-310)||(11992836-11992935)
chr8 (212-307)||(27621241-27621336)
chr8 (211-310)||(35260165-35260264)
chr8 (211-310)||(44411163-44411262)
chr8 (212-310)||(27752694-27752792)
chr8 (211-310)||(25321540-25321639)
chr8 (212-305)||(34713641-34713734)
chr8 (212-308)||(3100063-3100159)
chr8 (212-310)||(31132986-31133082)
chr8 (211-310)||(37598177-37598276)
chr8 (212-310)||(35346260-35346357)
chr8 (210-310)||(35344475-35344576)
chr8 (211-305)||(12108268-12108363)
chr8 (225-310)||(44052729-44052814)
chr8 (212-310)||(24612432-24612533)
chr8 (212-297)||(39187351-39187436)
chr8 (238-308)||(36538168-36538238)
chr8 (213-279)||(37566453-37566519)
chr8 (379-466)||(37598022-37598109)
chr8 (379-465)||(44358613-44358699)
chr8 (379-464)||(27621084-27621169)
chr8 (379-464)||(39187187-39187272)
chr8 (379-466)||(44052572-44052660)
chr8 (379-466)||(24612602-24612689)
chr8 (210-283)||(32678470-32678544)
chr8 (379-466)||(35260009-35260096)
chr8 (383-466)||(12108122-12108204)
chr8 (379-466)||(11044009-11044096)
chr8 (381-464)||(32678633-32678716)
chr8 (383-466)||(37567557-37567640)
chr8 (379-466)||(44411331-44411418)
chr8 (379-465)||(35346426-35346512)
chr8 (379-462)||(3099908-3099992)
chr8 (212-298)||(2238550-2238636)
chr8 (379-466)||(27752538-27752625)
chr8 (382-463)||(11992682-11992764)
chr8 (379-419)||(34713527-34713567)
chr8 (379-447)||(31133151-31133219)
chr8 (379-466)||(25321708-25321795)
chr8 (212-305)||(26483644-26483736)
chr8 (383-465)||(33851149-33851231)
chr8 (386-452)||(40487794-40487859)
chr8 (379-464)||(36538012-36538097)
chr8 (379-466)||(35344318-35344406)
chr8 (251-305)||(2052975-2053029)
chr8 (212-298)||(24510652-24510738)
chr8 (379-415)||(2238715-2238751)
chr8 (253-305)||(6401732-6401784)
chr8 (212-272)||(16644187-16644247)
chr8 (276-308)||(37567450-37567482)
chr8 (383-415)||(41426342-41426374)
[»] chr2 (52 HSPs)
chr2 (205-310)||(4092116-4092221)
chr2 (211-310)||(15858641-15858740)
chr2 (212-310)||(792309-792407)
chr2 (212-310)||(21539862-21539960)
chr2 (211-305)||(33635446-33635540)
chr2 (212-310)||(38071403-38071501)
chr2 (211-310)||(14565325-14565424)
chr2 (211-310)||(35832517-35832616)
chr2 (211-310)||(38549595-38549694)
chr2 (211-307)||(10979277-10979373)
chr2 (212-310)||(43451610-43451708)
chr2 (211-310)||(10478283-10478382)
chr2 (214-307)||(5091495-5091588)
chr2 (203-299)||(43075865-43075961)
chr2 (212-310)||(29513973-29514070)
chr2 (212-310)||(44804003-44804101)
chr2 (211-307)||(8784503-8784600)
chr2 (206-310)||(29514422-29514526)
chr2 (211-298)||(38564669-38564756)
chr2 (225-310)||(28492625-28492710)
chr2 (207-287)||(28424401-28424481)
chr2 (379-466)||(792476-792563)
chr2 (379-466)||(21539706-21539793)
chr2 (379-466)||(8784344-8784431)
chr2 (379-466)||(28424223-28424310)
chr2 (383-466)||(43075699-43075782)
chr2 (379-466)||(5091660-5091749)
chr2 (380-466)||(29514140-29514226)
chr2 (211-305)||(18833861-18833956)
chr2 (383-466)||(29514599-29514682)
chr2 (379-464)||(22162271-22162356)
chr2 (380-465)||(38549764-38549849)
chr2 (379-466)||(28492469-28492556)
chr2 (379-461)||(4033795-4033877)
chr2 (382-461)||(35832366-35832445)
chr2 (379-464)||(14565493-14565579)
chr2 (262-310)||(4033678-4033726)
chr2 (379-419)||(4092007-4092047)
chr2 (381-466)||(9294604-9294689)
chr2 (379-415)||(15068735-15068771)
chr2 (389-466)||(15858740-15858817)
chr2 (379-415)||(18834030-18834066)
chr2 (206-305)||(35023012-35023112)
chr2 (379-419)||(44803894-44803934)
chr2 (212-302)||(9294768-9294859)
chr2 (380-415)||(13822891-13822926)
chr2 (227-269)||(13822735-13822777)
chr2 (251-305)||(43415515-43415569)
chr2 (248-305)||(32010216-32010273)
chr2 (379-419)||(10478174-10478214)
chr2 (250-302)||(33932914-33932966)
chr2 (379-448)||(43451472-43451541)
[»] chr6 (23 HSPs)
chr6 (211-310)||(17721762-17721861)
chr6 (211-310)||(10228017-10228116)
chr6 (212-310)||(374204-374302)
chr6 (212-310)||(5121410-5121508)
chr6 (211-310)||(30949240-30949339)
chr6 (212-310)||(30766551-30766649)
chr6 (226-310)||(12278811-12278895)
chr6 (379-465)||(12278656-12278742)
chr6 (379-466)||(374048-374135)
chr6 (379-466)||(17721930-17722017)
chr6 (212-305)||(31887074-31887168)
chr6 (379-466)||(33756205-33756292)
chr6 (208-263)||(17599464-17599519)
chr6 (380-466)||(17598242-17598328)
chr6 (379-465)||(30766396-30766482)
chr6 (379-466)||(10227861-10227948)
chr6 (379-464)||(30949086-30949171)
chr6 (215-307)||(32882648-32882740)
chr6 (205-272)||(7274822-7274889)
chr6 (227-310)||(21964062-21964145)
chr6 (258-308)||(17598400-17598450)
chr6 (380-466)||(31887243-31887330)
chr6 (379-415)||(32882814-32882850)
[»] chr4 (53 HSPs)
chr4 (211-310)||(10591422-10591521)
chr4 (211-310)||(29180331-29180430)
chr4 (209-310)||(30776401-30776502)
chr4 (211-310)||(28681761-28681860)
chr4 (215-310)||(43980600-43980695)
chr4 (212-310)||(29899817-29899915)
chr4 (212-310)||(39969909-39970007)
chr4 (216-310)||(53677403-53677497)
chr4 (205-310)||(3043080-3043185)
chr4 (212-310)||(30777589-30777688)
chr4 (212-310)||(9797995-9798093)
chr4 (221-307)||(49902132-49902218)
chr4 (212-310)||(50768547-50768645)
chr4 (216-310)||(55937627-55937721)
chr4 (211-300)||(38187647-38187736)
chr4 (204-308)||(47807299-47807402)
chr4 (212-310)||(37788553-37788651)
chr4 (211-308)||(51495253-51495349)
chr4 (205-310)||(32012239-32012345)
chr4 (211-310)||(1620131-1620231)
chr4 (243-310)||(38940971-38941038)
chr4 (379-466)||(53677566-53677653)
chr4 (379-464)||(49901975-49902060)
chr4 (379-466)||(30776571-30776658)
chr4 (379-466)||(30777433-30777520)
chr4 (247-305)||(52713162-52713220)
chr4 (379-465)||(3043254-3043340)
chr4 (379-464)||(29180499-29180584)
chr4 (379-464)||(32012414-32012499)
chr4 (381-466)||(38940815-38940900)
chr4 (379-466)||(43980444-43980531)
chr4 (379-466)||(52713009-52713096)
chr4 (379-465)||(9798162-9798248)
chr4 (379-461)||(10591590-10591672)
chr4 (379-461)||(39970076-39970158)
chr4 (381-466)||(1619975-1620060)
chr4 (212-307)||(5222212-5222308)
chr4 (379-450)||(47807157-47807228)
chr4 (379-466)||(50768391-50768478)
chr4 (380-466)||(37788397-37788483)
chr4 (211-268)||(51495372-51495428)
chr4 (381-466)||(27750437-27750522)
chr4 (380-465)||(38187814-38187899)
chr4 (382-466)||(29899661-29899745)
chr4 (212-305)||(27750265-27750361)
chr4 (210-272)||(48793575-48793637)
chr4 (379-450)||(51495111-51495182)
chr4 (379-466)||(55937790-55937877)
chr4 (211-305)||(30011872-30011967)
chr4 (381-415)||(30012041-30012075)
chr4 (211-305)||(39078268-39078362)
chr4 (212-305)||(47867991-47868084)
chr4 (379-415)||(5222380-5222416)
[»] chr1 (61 HSPs)
chr1 (211-310)||(18852328-18852427)
chr1 (211-310)||(23873783-23873882)
chr1 (212-310)||(26907048-26907146)
chr1 (210-307)||(49924527-49924624)
chr1 (212-310)||(18913301-18913400)
chr1 (212-310)||(15285908-15286005)
chr1 (209-310)||(46949426-46949527)
chr1 (211-310)||(29488853-29488952)
chr1 (211-310)||(26479844-26479944)
chr1 (212-307)||(18036652-18036747)
chr1 (211-310)||(25990853-25990952)
chr1 (212-307)||(28916473-28916567)
chr1 (211-310)||(40935569-40935668)
chr1 (211-310)||(43655993-43656092)
chr1 (212-310)||(44875284-44875382)
chr1 (211-310)||(38942396-38942496)
chr1 (211-310)||(6848266-6848364)
chr1 (211-310)||(15311282-15311381)
chr1 (211-302)||(28017769-28017860)
chr1 (211-310)||(40960430-40960529)
chr1 (212-310)||(9128148-9128246)
chr1 (217-310)||(35941946-35942039)
chr1 (211-307)||(39026201-39026298)
chr1 (212-310)||(40220161-40220262)
chr1 (212-310)||(31970266-31970364)
chr1 (379-465)||(43656161-43656247)
chr1 (205-306)||(45357825-45357928)
chr1 (229-305)||(47997064-47997140)
chr1 (211-287)||(4529304-4529379)
chr1 (208-307)||(35189309-35189409)
chr1 (379-466)||(44875128-44875215)
chr1 (379-466)||(46949270-46949357)
chr1 (380-466)||(15285753-15285839)
chr1 (382-463)||(18852175-18852256)
chr1 (379-466)||(25990697-25990784)
chr1 (379-466)||(26479688-26479775)
chr1 (380-466)||(23873952-23874038)
chr1 (379-465)||(28017608-28017694)
chr1 (211-272)||(36037380-36037441)
chr1 (379-465)||(38942565-38942651)
chr1 (380-465)||(35941791-35941876)
chr1 (381-465)||(4529137-4529221)
chr1 (379-466)||(18036493-18036580)
chr1 (379-466)||(26907213-26907300)
chr1 (381-464)||(28916641-28916724)
chr1 (379-466)||(29488697-29488784)
chr1 (379-465)||(31970433-31970519)
chr1 (379-461)||(40220011-40220092)
chr1 (379-465)||(40960598-40960684)
chr1 (379-461)||(47996908-47996990)
chr1 (386-466)||(9127992-9128072)
chr1 (244-307)||(35884319-35884382)
chr1 (379-465)||(40935737-40935823)
chr1 (379-465)||(49924369-49924455)
chr1 (211-267)||(36384076-36384132)
chr1 (212-305)||(15959596-15959687)
chr1 (381-448)||(18913472-18913539)
chr1 (211-305)||(24190583-24190676)
chr1 (379-466)||(39026370-39026457)
chr1 (211-272)||(24728579-24728640)
chr1 (383-465)||(36383878-36383960)
[»] chr7 (67 HSPs)
chr7 (209-310)||(43107814-43107915)
chr7 (211-310)||(9818572-9818671)
chr7 (211-310)||(10720497-10720596)
chr7 (211-310)||(21654032-21654131)
chr7 (212-310)||(18206231-18206329)
chr7 (212-310)||(35181296-35181394)
chr7 (212-310)||(41889275-41889373)
chr7 (212-308)||(3157542-3157638)
chr7 (212-310)||(7989219-7989318)
chr7 (211-310)||(23106557-23106656)
chr7 (212-310)||(19932967-19933065)
chr7 (211-310)||(44600550-44600649)
chr7 (212-310)||(48879492-48879590)
chr7 (219-310)||(22111248-22111340)
chr7 (219-310)||(40583249-40583341)
chr7 (211-310)||(32491018-32491117)
chr7 (212-310)||(42617775-42617874)
chr7 (211-310)||(47383510-47383609)
chr7 (205-310)||(40560486-40560591)
chr7 (222-310)||(41815615-41815703)
chr7 (218-310)||(41890162-41890253)
chr7 (379-465)||(41889120-41889206)
chr7 (379-466)||(22111409-22111496)
chr7 (215-310)||(23731664-23731761)
chr7 (379-466)||(35181140-35181227)
chr7 (379-466)||(40583093-40583180)
chr7 (379-466)||(48879336-48879423)
chr7 (379-464)||(23106403-23106488)
chr7 (382-466)||(34808167-34808251)
chr7 (379-466)||(43107984-43108072)
chr7 (379-466)||(21654200-21654287)
chr7 (249-307)||(34808326-34808384)
chr7 (379-461)||(45598857-45598939)
chr7 (212-300)||(45599019-45599109)
chr7 (379-466)||(47383354-47383441)
chr7 (211-268)||(29235980-29236037)
chr7 (380-466)||(44600394-44600480)
chr7 (379-464)||(36576368-36576453)
chr7 (212-307)||(33153146-33153241)
chr7 (215-310)||(48937805-48937899)
chr7 (206-307)||(35084006-35084108)
chr7 (257-310)||(19964151-19964204)
chr7 (379-465)||(23731509-23731595)
chr7 (245-302)||(36576529-36576585)
chr7 (211-268)||(40593964-40594021)
chr7 (379-465)||(41815772-41815858)
chr7 (383-464)||(3157386-3157467)
chr7 (379-464)||(19933134-19933219)
chr7 (379-464)||(19964273-19964358)
chr7 (379-452)||(42617633-42617706)
chr7 (379-415)||(33153038-33153074)
chr7 (381-465)||(48937970-48938055)
chr7 (381-465)||(48942996-48943081)
chr7 (211-305)||(25944690-25944785)
chr7 (380-415)||(28608372-28608407)
chr7 (227-298)||(30082467-30082538)
chr7 (211-305)||(18102644-18102738)
chr7 (379-466)||(39348737-39348824)
chr7 (227-268)||(18800694-18800735)
chr7 (215-272)||(35923398-35923455)
chr7 (379-461)||(40560335-40560417)
chr7 (381-418)||(41890323-41890360)
chr7 (383-419)||(7989391-7989427)
chr7 (379-448)||(18206398-18206467)
chr7 (250-310)||(22369325-22369385)
chr7 (212-272)||(22632236-22632296)
chr7 (379-415)||(35084180-35084216)
[»] scaffold0495 (2 HSPs)
scaffold0495 (211-310)||(4735-4834)
scaffold0495 (379-466)||(4580-4666)
[»] chr5 (32 HSPs)
chr5 (212-307)||(42365145-42365240)
chr5 (212-310)||(31316755-31316853)
chr5 (211-310)||(25962401-25962500)
chr5 (211-310)||(35462672-35462771)
chr5 (212-310)||(8145967-8146065)
chr5 (212-310)||(12638996-12639093)
chr5 (212-308)||(16286037-16286133)
chr5 (210-308)||(13146838-13146936)
chr5 (211-310)||(30086499-30086600)
chr5 (215-307)||(8541521-8541613)
chr5 (211-307)||(31690573-31690669)
chr5 (211-310)||(20914966-20915065)
chr5 (211-310)||(24432353-24432452)
chr5 (380-466)||(8146135-8146221)
chr5 (379-466)||(8541685-8541772)
chr5 (379-466)||(30086669-30086756)
chr5 (379-466)||(31690741-31690828)
chr5 (380-466)||(13146680-13146766)
chr5 (212-305)||(36413890-36413983)
chr5 (381-464)||(12638842-12638925)
chr5 (241-307)||(37066206-37066272)
chr5 (227-298)||(2002104-2002175)
chr5 (379-466)||(20914810-20914897)
chr5 (379-419)||(42365033-42365073)
chr5 (386-466)||(35462846-35462926)
chr5 (382-465)||(31316925-31317008)
chr5 (379-465)||(24439524-24439610)
chr5 (211-263)||(24439726-24439778)
chr5 (383-419)||(37066348-37066384)
chr5 (379-414)||(2002254-2002289)
chr5 (248-305)||(20039216-20039273)
chr5 (379-419)||(17825319-17825359)
[»] scaffold0300 (1 HSPs)
scaffold0300 (205-272)||(520-587)
[»] scaffold0009 (1 HSPs)
scaffold0009 (210-272)||(157941-158002)


Alignment Details
Target: chr3 (Bit Score: 145; Significance: 4e-76; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 12 - 213
Target Start/End: Complemental strand, 50101130 - 50100926
Alignment:
Q  12 tgttctgttctgttctgctcttaattttattttagagtttttagggttaatactttctttcgggatcgcgccttttccacttctatttcccccctctc-- 109  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  50101130 tgttgtgttctgttctgttcttaattttattttagagtttttagggttaatactttctttcgggatcgcgccttttccacttctatttcccccctctctc 50101031  T
Q  110 tctccttgc-aagaaacgcaccgttttgtcaccctttcttactgcttggatcatgtgtcnnnnnnnaaatggtggcttttatggatccttactggtaaaa 208  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||| ||||||    
T  50101030 tctccttgcaaaaaaacgcaccgttttgtcaccctttcttactgcttggatcatgtgtctttttttaactggtggcttttatggatccttactagtaaaa 50100931  T
Q  209 agata 213  Q
    |||||    
T  50100930 agata 50100926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 21654450 - 21654351
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  21654450 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 21654351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 34022803 - 34022705
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  34022803 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 34022705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 55400943 - 55400846
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  55400943 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 55400846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 37323992 - 37324092
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||    
T  37323992 aaaaatatactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgt 37324091  T
Q  305 t 305  Q
    |    
T  37324092 t 37324092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 206 - 310
Target Start/End: Complemental strand, 46580745 - 46580641
Alignment:
Q  206 aaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  46580745 aaaagttactcattccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 46580646  T
Q  306 ctcct 310  Q
    |||||    
T  46580645 ctcct 46580641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 53020388 - 53020292
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  53020388 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttct 53020292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 26641027 - 26641126
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||    
T  26641027 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 26641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 32322154 - 32322253
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||    
T  32322154 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 32322253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 31126416 - 31126318
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  31126416 tactccctctgttttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31126318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 46295991 - 46296091
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataa-ttttttgtgttctcc 309  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||| |||||| |||||||||||||||    
T  46295991 atactccctccgtcctaatttataagtaaaaaatactaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttctcc 46296090  T
Q  310 t 310  Q
    |    
T  46296091 t 46296091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 51426824 - 51426728
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||||| |||||||||||| |||||||||||||| || |||||||| |||||||| |||||||||||||| |||||||||||||||||||    
T  51426824 atactccctccgtcctaatttataagcaaaaaacactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttct 51426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 13541438 - 13541347
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| | ||||| |||||| ||||||||||||||    
T  13541438 atactccctccgttctaatttataaccaaaaaacactaattcacacttattaagaaaattaacacttagtaatttgaggtataattttttgt 13541347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 45347628 - 45347727
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||  |||| ||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  45347628 atactcctaccgtcctaatttataagtaaaaaacactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcct 45347727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 46820225 - 46820143
Alignment:
Q  225 ctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| | |||||||||||| |||| ||||||||||||||    
T  46820225 ctaatttataagtaaaaaccactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttct 46820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 49068255 - 49068157
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||| |||||||||||| |||||| | ||||||||| |||||||||||||||| | ||||||||||||  |||||||||||||||||||||    
T  49068255 tactctctccgtcctaatttataagcaaaaaatattaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 49068157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 16739074 - 16739174
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||     |||||| ||||||||| ||||||    
T  16739074 aaaaagctactccctccgtcctaatttataagccaaaaacactaattcacacttattaagaaaactaacatt-----atttgaggtataatttgttgtgt 16739168  T
Q  305 tctcct 310  Q
    ||||||    
T  16739169 tctcct 16739174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 52252237 - 52252145
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||| ||||||||||||||||||| | ||||||| |||||   |||||||||| | ||||||||||||||||||||||||||||||||    
T  52252237 tactccctccgtcctaatttataagtaaaaaatattaattcatactta---agaaaactaacacttagtgatttgaagtataattttttgtgttct 52252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 43576147 - 43576063
Alignment:
Q  226 taatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||| | |||||||||||| |||| |||||||||||||||||    
T  43576147 taatttataactaaaaaacactaattcatacttattaagaaaattaacacttagtgatttgaggtatgattttttgtgttctcct 43576063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 28793346 - 28793268
Alignment:
Q  232 ataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| | |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||    
T  28793346 ataagtaaaaaataataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatcct 28793268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 31126249 - 31126162
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||| ||||||||||||    
T  31126249 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataatggcataaaagttgg 31126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 46580573 - 46580486
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||| ||||||||||||    
T  46580573 ggagaacaaattgaatgcaatttgcatttaattttacattgtaaaatatgatttgtttgaaaaaacataataatggcataaaagttgg 46580486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 229 - 310
Target Start/End: Complemental strand, 1335297 - 1335216
Alignment:
Q  229 tttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||  ||| |||||||||||||||||    
T  1335297 tttataagaaaaaaacattaattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctcct 1335216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 51255390 - 51255292
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| ||||| |||||||||||| |||||| | ||||||| | |||||||||||||||| |  |||| || ||||||||||||||||||||||||||    
T  51255390 tactccttccgtcctaatttataagcaaaaaatattaattcatatttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctcct 51255292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 1335145 - 1335060
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||| ||||    
T  1335145 agaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacataaaaattgg 1335060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 21654282 - 21654194
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| ||||||||||| |||||||||||||    
T  21654282 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttgg 21654194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 23513604 - 23513517
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       || ||||||||||| |||||||||||  ||||||||||||    
T  23513604 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaagttgg 23513517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 26641195 - 26641282
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| |||||||| |||       |||||||||||||| |||||||||||  ||||||||||||    
T  26641195 ggagaacaaattgaatgcaatttgcatttaattttaccttgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 26641282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 303
Target Start/End: Complemental strand, 23514647 - 23514554
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtg 303  Q
    |||||||||||||  ||||||||||| |||||| || ||||||||| |||||||||||||||| | ||| |||||||| |||||||||| ||||    
T  23514647 atactccctccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgatttgaggtataattttgtgtg 23514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 55400772 - 55400691
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagt 463  Q
    ||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||    
T  55400772 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagt 55400691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 36188921 - 36189020
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | | |||||||||| ||||||||| |||||||||||||||||||| |||| |   ||| |||||| ||||| |||||||| |||||||    
T  36188921 atactccctccatcccaatttataagcaaaaaacacaaattcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctcct 36189020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 53020220 - 53020132
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| |||||||||||  ||||||||||||    
T  53020220 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaacataataatagcataaaagttgg 53020132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 13541310 - 13541227
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||| ||||||||||||||||||| ||||||||||||       ||||||||| |||| ||||||||||| |||||||||||||    
T  13541310 aacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacataataataacataaaagttgg 13541227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 37324171 - 37324258
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg----aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||| ||||||||||||       |||||||||||    ||| |||||||||||||||||||||||||    
T  37324171 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaaaaacataataatgacataaaagttgg 37324258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 49068088 - 49068018
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataat 449  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||    
T  49068088 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataat 49068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 26724940 - 26724997
Alignment:
Q  248 aattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||| |||||||||||||||||| || ||   ||||||||||||||||||||||||    
T  26724940 aattcatacttattaagaaaactaaaatataagaatttgaagtataattttttgtgtt 26724997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 46820086 - 46820000
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||| ||| ||||||| |||  |||||||||||    
T  46820086 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataaaaatagcataaaagttg 46820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 465
Target Start/End: Complemental strand, 45781433 - 45781348
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||||||    
T  45781433 gagaacaaattaaatgcaacttgaatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttg 45781348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 45781549 - 45781505
Alignment:
Q  264 gaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||| | |||||||||||| ||||||||||||||||||||    
T  45781549 gaaaactaacacttagtgatttgatgtataattttttgtgttctc 45781505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 51309618 - 51309522
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||| ||||| | |||||||||| |||||| ||| |||||||| ||||||||||||  || |  ||||  ||||| |||||||||||||||||||    
T  51309618 tactccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttct 51309522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 51426654 - 51426567
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg--aaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||| |||||||||| |||||||||||        |||||||||||  ||| ||||||| ||| |||||||||||||    
T  51426654 agaacaaattgaatgtaatttgcatttaattttacattagaaaagatgatttgtttgaaaaaaaacataagaataacataaaagttgg 51426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 6075293 - 6075199
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||| ||||||| || ||||||| |||||| |   | ||||||||||||||||||||||  | ||   ||||| ||||||||||||||||||    
T  6075293 atactccatccgttccaaattataagcaaaaaataaagaatcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgtt 6075199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 26208227 - 26208165
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacact-aattcacacttattaagaaaactaa 272  Q
    ||||||||||||| | || ||||||||||||||  || || ||||||||||||||||||||||    
T  26208227 atactccctccgtccaaaattataagtaaaaaaacctcaaatcacacttattaagaaaactaa 26208165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 30612356 - 30612286
Alignment:
Q  238 aaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||| || |||||||||||||||||||||| || || |||| |||| |  ||||||||||| |||||||    
T  30612356 aaaaaatacaaattcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctc 30612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 46303777 - 46303687
Alignment:
Q  217 cctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||| |||| |||||||||| |||||| |  |||||| | |||||||||||||||| |  |||| |||| || ||||||||||| ||||||    
T  46303777 cctcggttccaatttataagaaaaaaatatcaattcatatttattaagaaaactaaaacatagtaatttaaaatataattttttatgttct 46303687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 51255223 - 51255139
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||| ||||       |||||||||||||| ||||||  ||| ||||||||||||    
T  51255223 ggagaacaaattaaatgcaacttgcatttaattttagattggaaaagatgatttgtttgaaaaaacata--aataacataaaagttg 51255139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 52171976 - 52172029
Alignment:
Q  212 tactccctccgttctaatttataa--gtaaaaaacactaattcacacttattaa 263  Q
    ||||||||||||||||||||||||  | |||||||||||||||| | |||||||    
T  52171976 tactccctccgttctaatttataagcgaaaaaaacactaattcatatttattaa 52172029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 415
Target Start/End: Original strand, 36189092 - 36189125
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttac 415  Q
    ||||||||||||||||||||||||| ||||||||    
T  36189092 gaacaaattgaatgcaatttgcatttaattttac 36189125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 31292798 - 31292718
Alignment:
Q  230 ttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||| |||| | || |||||||||||| | |||||||| |  | || |||||||||||||||| || |||||||||    
T  31292798 ttataagtagaaaaaattatttcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctcct 31292718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 414
Target Start/End: Complemental strand, 51309447 - 51309415
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaatttta 414  Q
    ||||||||||||||||||||||||| |||||||    
T  51309447 gaacaaattgaatgcaatttgcatttaatttta 51309415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 52172093 - 52172133
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||| ||||||| ||||||| ||||||||||||    
T  52172093 ggagaacaaattaaatgcaacttgcatttaattttacattg 52172133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 11044263 - 11044165
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  11044263 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 11044165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 11992935 - 11992836
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  11992935 atactccctccgtcctaatttataagtaaaaaacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 11992836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 27621336 - 27621241
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  27621336 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttct 27621241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 35260264 - 35260165
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  35260264 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctcct 35260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 44411163 - 44411262
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  44411163 atactccttccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcct 44411262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 27752792 - 27752694
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  27752792 tactccctccgtcctgatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 27752694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 25321540 - 25321639
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||| |||||||||||    
T  25321540 atactccctccgtcctaatttataagcaaaaaacactaattcacacttatttagaaaactaacatttggtgatttgaggtataattttctgtgttctcct 25321639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 34713734 - 34713641
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  34713734 tactccctccgtcctaagttataagtaaaaaatactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtt 34713641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 3100159 - 3100063
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||    
T  3100159 tactccctccgtcttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctc 3100063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 31132986 - 31133082
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  31132986 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31133082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 37598276 - 37598177
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||||||||||||  |||||||||||||||| | ||| |||||||| ||||||||||||||||||||||    
T  37598276 atactccctccgtcctaatttataagcaaaaaacactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcct 37598177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 35346260 - 35346357
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| ||||| |||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  35346260 tactccttccgtcctaatttataag-aaaaaactctaattcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctcct 35346357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 210 - 310
Target Start/End: Complemental strand, 35344576 - 35344475
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||| ||| |||||||||||| |||||| | ||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  35344576 gatactccctacgtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 35344477  T
Q  309 ct 310  Q
    ||    
T  35344476 ct 35344475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 12108363 - 12108268
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaac-actaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||||||||||||||||| ||||||  | |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  12108363 atactccctccgttctaatttataagaaaaaaaatattaattctcacttattaagaaaactaacatttagtaatttgaagtataattttttgtgtt 12108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 44052814 - 44052729
Alignment:
Q  225 ctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  44052814 ctaatttataagcaaaaaatactaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcct 44052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 24612432 - 24612533
Alignment:
Q  212 tactccctccgttctaatttataagtaaaa---aacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||| |||||||||||||| ||||   ||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||||| |||||||    
T  24612432 tactccctccattctaatttataagcaaaaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctc 24612531  T
Q  309 ct 310  Q
    ||    
T  24612532 ct 24612533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 297
Target Start/End: Complemental strand, 39187436 - 39187351
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattt 297  Q
    ||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||    
T  39187436 tactccctccgtcataatttataagcaaaaaacactaattcacgcttattaagaaaactaacacttagtgatttgaggtataattt 39187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 36538238 - 36538168
Alignment:
Q  238 aaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| | |||||||||| |||||||    
T  36538238 aaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggaataattttttatgttctc 36538168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 37566453 - 37566519
Alignment:
Q  213 actccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttag 279  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  37566453 actccctccgtcctaatttataagcaaaaaacactaattcacacttattaaaaaaactaatacttag 37566519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 37598109 - 37598022
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||  |||||||||||||    
T  37598109 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataacaacataaaagttgg 37598022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 44358613 - 44358699
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| ||| ||||||| ||||||||||||    
T  44358613 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacgtaataataacataaaagttg 44358699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 27621169 - 27621084
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||    
T  27621169 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtt 27621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 39187272 - 39187187
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||    
T  39187272 ggagaacaaattgaatgcaatttgcatttaattttacattggaaatgatgatttgtttgaaaaaacataataatagcataaaagtt 39187187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 44052660 - 44052572
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| ||||||||||| |||||||||||||    
T  44052660 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttgg 44052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 24612602 - 24612689
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||| ||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  24612602 ggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 24612689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 32678470 - 32678544
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgat 283  Q
    |||||||||||||| |||||||||||| |||||| || |||||||||||||||||||||||||| | ||||||||    
T  32678470 gatactccctccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgat 32678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 35260096 - 35260009
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||| |||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  35260096 ggagaacaaattgaatggaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 35260009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 12108204 - 12108122
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||| || ||||||||| ||||||||||||    
T  12108204 aacaaattgaatgcaatttgcattgaattttacattg-aaaaaatgatttgtttgaaaaaatataataatggcataaaagttgg 12108122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 11044096 - 11044009
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||| ||||||| ||||||||||||       |||||| ||||||| |||||||||||  ||||||||||||    
T  11044096 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataataatagcataaaagttgg 11044009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 32678633 - 32678716
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||    
T  32678633 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagtt 32678716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 37567557 - 37567640
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||| ||||||||||||       |||||||| ||||| |||||||||||  ||||||||||||    
T  37567557 aacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtctgaaaaaacataataatagcataaaagttgg 37567640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 44411331 - 44411418
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| || ||||||||  ||||||||||||    
T  44411331 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttgg 44411418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 35346426 - 35346512
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||| | ||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  35346426 ggagaatacattgaatgcaatttgcattcaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttg 35346512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 462
Target Start/End: Complemental strand, 3099992 - 3099908
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaag 462  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| |||||||||||  ||||||||    
T  3099992 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcataaaag 3099908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 2238550 - 2238636
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttt 298  Q
    ||||||||||||   |||||||||| ||||||||| |||||||||||||||||||||| || |  ||||  ||||| ||||||||||    
T  2238550 tactccctccgtctcaatttataagcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 2238636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 27752625 - 27752538
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  27752625 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 27752538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 11992764 - 11992682
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagt 463  Q
    ||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| |||||||||||  |||||||||    
T  11992764 gaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcataaaagt 11992682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 34713567 - 34713527
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  34713567 ggagaacaaattgaatgcaatttgcatttaattttacattg 34713527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 31133151 - 31133219
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacata 447  Q
    |||||| ||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||    
T  31133151 ggagaaaaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 31133219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 25321708 - 25321795
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||| |||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  25321708 ggagagcaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 25321795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 26483736 - 26483644
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||| | || ||||||| ||||||||  ||| ||||||||||||||||||||| |  ||   |||||||||||| |||||||||||    
T  26483736 tactccctccgtcccaaattataagaaaaaaacaaaaat-cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgtt 26483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 465
Target Start/End: Original strand, 33851149 - 33851231
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||||||    
T  33851149 aacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttg 33851231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 452
Target Start/End: Original strand, 40487794 - 40487859
Alignment:
Q  386 aaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataat 452  Q
    ||||||||||||| ||||||||||||||||||||       |||||||||||||| |||||||||||    
T  40487794 aaattgaatgcaacttgcattgaattttacattggaaaagatgatttgtttgaaa-aacataataat 40487859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 36538097 - 36538012
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||    
T  36538097 ggagaataaattaaatgcaaattgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtt 36538012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 35344406 - 35344318
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg-nnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| | ||||||||||||||||||| ||||||||||||        |||||||||||||| |||||||||||  ||||||| ||||    
T  35344406 ggagaatacattgaatgcaatttgcatttaattttacattgaaaaaaaatgatttgtttgaaaaaacataataatagcataaaaattgg 35344318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 2053029 - 2052975
Alignment:
Q  251 tcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||||||||||||| |  || | ||| ||||||||||||||||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgtt 2052975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 298
Target Start/End: Original strand, 24510652 - 24510738
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttt 298  Q
    |||||||||| | | |||||||||| ||||||||  |||||||||||||||| ||||| || |  ||||  ||||| ||||||||||    
T  24510652 tactccctccatcccaatttataagcaaaaaacataaattcacacttattaataaaacaaaaacatagtagtttgaggtataatttt 24510738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 2238715 - 2238751
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  2238715 ggagaacaaattgaatgcgatttgcatttaattttac 2238751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 6401784 - 6401732
Alignment:
Q  253 acacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||||| |||| || |||| ||||| |||||| |||||||||||    
T  6401784 acacttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgtt 6401732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 16644247 - 16644187
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    |||||||||||| | |||||| ||| ||||||||  ||||||||||||||| ||| |||||    
T  16644247 tactccctccgtccaaatttacaagaaaaaaacatcaattcacacttattaggaagactaa 16644187  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 308
Target Start/End: Original strand, 37567450 - 37567482
Alignment:
Q  276 ttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||||| ||||||||||||||||||||    
T  37567450 ttagtgatttgaggtataattttttgtgttctc 37567482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 41426374 - 41426342
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||||||||| ||||||||    
T  41426374 aacaaattgaatgcaatttgcatttaattttac 41426342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 4092221 - 4092116
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  4092221 aaaaaaatactccctccgttctaatttataagcaaaaaacactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgt 4092122  T
Q  305 tctcct 310  Q
    ||||||    
T  4092121 tctcct 4092116  T

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Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 15858641 - 15858740
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  15858641 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 15858740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 792309 - 792407
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  792309 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 792407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 21539960 - 21539862
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  21539960 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 21539862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 33635540 - 33635446
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33635540 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtt 33635446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 38071403 - 38071501
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  38071403 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcct 38071501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 14565325 - 14565424
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  14565325 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 14565424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 35832616 - 35832517
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  35832616 atactccctccatcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 35832517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 38549595 - 38549694
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||    
T  38549595 atactccctctgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctcct 38549694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 10979373 - 10979277
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||    
T  10979373 atactccctccgtcctaatttataagcaaaaaacactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 10979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 43451708 - 43451610
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  43451708 tactccctccgtcctaatttataagcaaaaaatactaattcatacttattaagaaaactaacatttagtgatttgaggtatgattttttgtgttctcct 43451610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 10478382 - 10478283
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||| ||||  |||||||||||||||||||||    
T  10478382 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctcct 10478283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 5091495 - 5091588
Alignment:
Q  214 ctccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||    
T  5091495 ctccctccgttttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttct 5091588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 43075961 - 43075865
Alignment:
Q  203 gtaaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttt 299  Q
    ||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| || ||||||||    
T  43075961 gtaaaaatatactccctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtgtaattttt 43075865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 29513973 - 29514070
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||| ||| | ||||| |||||| ||||||||||||||||||||||    
T  29513973 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaa-taacacttagtaatttgaggtataattttttgtgttctcct 29514070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 44804101 - 44804003
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||| ||||||| |||||||||||| ||| |||| |||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||    
T  44804101 tacttcctccgtcctaatttataagcaaacaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 44804003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 8784600 - 8784503
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||||| ||||||||||| |||||| || ||||||| |||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  8784600 atactccctccgttttaatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 8784503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 29514422 - 29514526
Alignment:
Q  206 aaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||| ||||||||||||| |||||||||||| |||||||| ||||||| ||||||||| |||||||| | ||||| |||||| |||||||||||||||||    
T  29514422 aaaacatactccctccgtcctaatttataagcaaaaaacagtaattcatacttattaaaaaaactaacacttagtaatttgaggtataattttttgtgtt 29514521  T
Q  306 ctcct 310  Q
     ||||    
T  29514522 atcct 29514526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 298
Target Start/End: Original strand, 38564669 - 38564756
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttt 298  Q
    ||||||||||||| |||||||||||  |||||||  |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  38564669 atactccctccgtcctaatttataaacaaaaaacgataattcacacttattaagaaaactaacatttagtgatttgaggtataatttt 38564756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 28492710 - 28492625
Alignment:
Q  225 ctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||| | ||| ||||||||  |||||||||||||||||||||    
T  28492710 ctaatttataagcaaaaagcactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctcct 28492625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28424481 - 28424401
Alignment:
Q  207 aaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttga 287  Q
    |||| |||||||||||| |||||||||||| |||||||||||||| | |||||||||||||||||| | ||||||||||||    
T  28424481 aaaggtactccctccgtcctaatttataagcaaaaaacactaattgatacttattaagaaaactaacacttagtgatttga 28424401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 792476 - 792563
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||| ||||||| ||||||||||| |||||||||||||    
T  792476 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataataataacataaaagttgg 792563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 21539793 - 21539706
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||| ||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  21539793 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttgg 21539706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 8784431 - 8784344
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  8784431 ggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaataacataataatagcataaaagttgg 8784344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 28424310 - 28424223
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||| ||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  28424310 ggagaacaaattgaatacaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 28424223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 43075782 - 43075699
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  43075782 aacaaattgaatgcaatttgcatttaattttacattggaatagatgatttgtttgaaaaaacataataatagcataaaagttgg 43075699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 5091660 - 5091749
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg--aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||  ||| |||||||||||| ||||||||||||    
T  5091660 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaaaacataataatggcataaaagttgg 5091749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 29514140 - 29514226
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||||||||||| |||||||||||        |||||||||||||| |||||||||||  ||||||||||||    
T  29514140 gagaacaaattgaatgcaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 29514226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 18833861 - 18833956
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaac-actaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||| |||||||||||| ||||||  || | |||||||||||||||||| |||| || | || |||||| |||||||||||||||||    
T  18833861 atactccctccgtcctaatttataagcaaaaaaatacaatttcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgtt 18833956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 466
Target Start/End: Original strand, 29514599 - 29514682
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||| |||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  29514599 aacaaattgaatgcaatttacatttaattttacattgggaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 29514682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 22162356 - 22162271
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||| ||||||||||||||||||| ||||||||||||       | |||||||||||| |||||||||||  ||||||||||    
T  22162356 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacataataatagcataaaagtt 22162271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 38549764 - 38549849
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||||||||||||||||| ||||||| ||||||||||||       |||||| ||||||| |||||||||||  |||||||||||    
T  38549764 gagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaagttg 38549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 28492556 - 28492469
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| || |||||||||||||||||| ||||||||||||       |||||||||||||| || ||||||||  ||||||||||||    
T  28492556 ggagaataagttgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaatataataatagcataaaagttgg 28492469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 461
Target Start/End: Original strand, 4033795 - 4033877
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||| ||||||||||||||||||||| ||||||||||||       || ||||||||||| |||||||||||  |||||||    
T  4033795 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaa 4033877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 461
Target Start/End: Complemental strand, 35832445 - 35832366
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    ||||| ||||||||||||||||||| ||||||| ||||       |||||||||||||| |||||||||||  |||||||    
T  35832445 gaacagattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcataaaa 35832366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 14565493 - 14565579
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagtt 464  Q
    |||||||||||| ||||||||||||||| ||||||||||||       |||||| |||| ||| |||||||||||  ||||||||||    
T  14565493 ggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaaacataataatagcataaaagtt 14565579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 4033678 - 4033726
Alignment:
Q  262 aagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | ||| |||||||| ||||||||||||||||||||||    
T  4033678 aagaaaactaacacttaatgatttgaggtataattttttgtgttctcct 4033726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 4092047 - 4092007
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  4092047 ggagaacaaattgaatgcaacttgcatttaattttacattg 4092007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 9294689 - 9294604
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||| |||||||| |||       |||||| | ||||| ||||||||||  |||||||| ||||    
T  9294689 agaacaaattgaatgcaatttgcatttaattttactttgaaaaagatgatttttatgaaataacataataagaacataaaaattgg 9294604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 15068771 - 15068735
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||||||||||||| ||||||||    
T  15068771 ggagaacaaattgaatgcaatttgcatttaattttac 15068735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 466
Target Start/End: Original strand, 15858740 - 15858817
Alignment:
Q  389 ttgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||| ||||||||||||       |||||| ||||||| |||||||||||  ||||||| ||||    
T  15858740 ttgaatgcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaatttgg 15858817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 18834030 - 18834066
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||||||||||||| ||||||||    
T  18834030 ggagaacaaattgaatgcaatttgcatttaattttac 18834066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 35023112 - 35023012
Alignment:
Q  206 aaaagatactccctccgttctaatttataagtaaaaaacact-aattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    |||| ||||||||||||||  || || |||| |||||| | | ||||||||||||||||||||||||| |  ||   ||||| |||||||||||||||||    
T  35023112 aaaacatactccctccgtttcaaattgtaagaaaaaaaaaatcaattcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgt 35023013  T
Q  305 t 305  Q
    |    
T  35023012 t 35023012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 44803934 - 44803894
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  44803934 ggagaacaaattgaatgcaatttgtatttaattttacattg 44803894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 9294859 - 9294768
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    ||||||||| || |||||||||| | |||||| ||  ||||| || |||||||||||||||| |  ||||  ||||||||||||||||||||    
T  9294859 tactccctcagtcctaatttataggaaaaaaaacatcaattcgcatttattaagaaaactaaaagatagtagtttgaagtataattttttgt 9294768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 415
Target Start/End: Original strand, 13822891 - 13822926
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttac 415  Q
    ||||||||||||||||||||||||||| ||||||||    
T  13822891 gagaacaaattgaatgcaatttgcatttaattttac 13822926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 13822735 - 13822777
Alignment:
Q  227 aatttataagtaaaaaacactaattcacacttattaagaaaac 269  Q
    |||||||||| |||||| || ||||||||||||||||||||||    
T  13822735 aatttataagcaaaaaatacaaattcacacttattaagaaaac 13822777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 43415569 - 43415515
Alignment:
Q  251 tcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||| |||||||||||| || ||   ||||||||||||||||||||||||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgtt 43415515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 32010273 - 32010216
Alignment:
Q  248 aattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||||||||||||||||||  ||||  |||| | |||| |||||||||||    
T  32010273 aattcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgtt 32010216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 10478214 - 10478174
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||| ||||||| ||||||| ||||||||||||    
T  10478214 ggagaacaaattaaatgcaacttgcatttaattttacattg 10478174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 33932914 - 33932966
Alignment:
Q  250 ttcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    ||||||||||||||||||||||| |  ||||  |||| |||||||||||||||    
T  33932914 ttcacacttattaagaaaactaaaacatagtattttgtagtataattttttgt 33932966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 43451541 - 43451472
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataa 448  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||       |||||||||||||| |||||||    
T  43451541 ggagaataaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaataacataa 43451472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 17721762 - 17721861
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  17721762 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 17721861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 10228116 - 10228017
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  10228116 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcct 10228017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 374302 - 374204
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  374302 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcct 374204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 5121410 - 5121508
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||| ||||||||||||||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctcct 5121508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 30949339 - 30949240
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | |||||||||||| |||||| ||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||    
T  30949339 atactccctccatcctaatttataagcaaaaaatactaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctcct 30949240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 30766649 - 30766551
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| ||| |||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||    
T  30766649 tactcccttcgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 30766551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 12278895 - 12278811
Alignment:
Q  226 taatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  12278895 taatttataagcaaaaaacatcaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 12278811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 12278742 - 12278656
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||||||| |||||||||||        |||||||||||||| ||||||||||| ||||||||||||    
T  12278742 ggagaacaaattgaatgcaatttgcatttaattttacatttgaaaaaatgatttgtttgaaaaaacataataataacataaaagttg 12278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 374135 - 374048
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| |||||||||| |       |||||||||||||| |||||||||||  ||||||||||||    
T  374135 ggagaacaaattgaatgcaatttgcatttaattttacatcggaaaatatgatttgtttgaaaaaacataataatagcataaaagttgg 374048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 17721930 - 17722017
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||| ||||||| |||||||||||  ||||||||||||    
T  17721930 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaatatgatttctttgaaaaaacataataatagcataaaagttgg 17722017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 31887074 - 31887168
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||||||||||||||| |||||| || ||||| ||||||||||| |||||||| | | ||||||||||  ||| ||||||||||||    
T  31887074 tactccctccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgatttgatatatgattttttgtgtt 31887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 33756292 - 33756205
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||| ||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  33756292 ggaggacaaattgaatgcaatttgcatttaattttacattgaaaaaaatgatttgtttgaaaaaacataataatagcataaaagttgg 33756205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 17599519 - 17599464
Alignment:
Q  208 aagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaa 263  Q
    |||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  17599519 aagatactccctccgtcctaatttataagcaaaaaacattaattcacacttattaa 17599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 17598328 - 17598242
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||| ||||||||||||||||||||| ||||||||||||        ||||||||||||| ||||||||||| ||||| |||||||    
T  17598328 gagaataaattgaatgcaatttgcatttaattttacattggaaaagaagatttgtttgaaaaaacataataataacatacaagttgg 17598242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 30766482 - 30766396
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||||||||||| ||||||||||||       | |||| ||||||| ||||||||||| ||||||||||||    
T  30766482 ggagaacaaattcaatgcaatttgcatttaattttacattgaaaaaaataatttctttgaaaaaacataataataacataaaagttg 30766396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 10227948 - 10227861
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| ||||||||||||||||||| ||||||| ||||       ||||||||||| || |||||||||||  ||||||||||||    
T  10227948 ggagaacacattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttggaaaaacataataatagcataaaagttgg 10227861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 30949171 - 30949086
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||    
T  30949171 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtt 30949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 32882648 - 32882740
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||| ||| |||||||||| ||||||  | |||||||||||||||||||||| || |  | ||  ||||| |||||||||||||||||||    
T  32882648 tccctccattccaatttataagcaaaaaattcaaattcacacttattaagaaaacaaaaacattgtagtttgaggtataattttttgtgttct 32882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 7274822 - 7274889
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    ||||| ||||||||||||| |||| ||||||| ||||||    || ||||||||||||||||||||||    
T  7274822 aaaaacatactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 7274889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 21964145 - 21964062
Alignment:
Q  227 aatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||| ||||||  | |||||||||||| ||| |||||||| |  |||| ||| ||  |||||||||||||||||||||    
T  21964145 aatttataagcaaaaaaatccaattcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctcct 21964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 17598450 - 17598400
Alignment:
Q  258 tattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||| ||| | ||| |||||||| ||||||||||||||||||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctc 17598400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 31887243 - 31887330
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttgg 466  Q
    ||||||||||| ||||||| ||||||| ||||||||||||       ||||||||||| ||| ||||||| |||  ||||||||||||    
T  31887243 gagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataaaaatagcataaaagttgg 31887330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 32882814 - 32882850
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  32882814 ggagaacaaattgaatgcgatttgcatttaattttac 32882850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 10591422 - 10591521
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  10591422 atactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 10591521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 29180331 - 29180430
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  29180331 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 29180430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 30776401 - 30776502
Alignment:
Q  209 agatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  30776401 agatactccctccgtcctaatttataagcaaaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 30776500  T
Q  309 ct 310  Q
    ||    
T  30776501 ct 30776502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 28681860 - 28681761
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  28681860 atactctctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 28681761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 43980695 - 43980600
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  43980695 tccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataaatttttgtgttctcct 43980600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 29899915 - 29899817
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||| ||||||||||||||||||||||    
T  29899915 tactccctccgtcctaatttataagtaaaaaacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctcct 29899817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 39969909 - 39970007
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  39969909 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 39970007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 53677403 - 53677497
Alignment:
Q  216 ccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  53677403 ccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 53677497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 3043080 - 3043185
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||    
T  3043080 aaaaacatactctctccgtcctaatttataagtaaaaaacactaattcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgt 3043179  T
Q  305 tctcct 310  Q
     |||||    
T  3043180 actcct 3043185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 30777688 - 30777589
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  30777688 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctcct 30777589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 9797995 - 9798093
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| ||| |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  9797995 tactcccttcgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctcct 9798093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 221 - 307
Target Start/End: Complemental strand, 49902218 - 49902132
Alignment:
Q  221 cgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  49902218 cgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttct 49902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 50768645 - 50768547
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  50768645 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttcct 50768547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 216 - 310
Target Start/End: Original strand, 55937627 - 55937721
Alignment:
Q  216 ccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||| |||||| |||||||||||||||    
T  55937627 ccctccgtcctaatttataagtaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataagtttttgtgttctcct 55937721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 38187647 - 38187736
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttttt 300  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  38187647 atactccctccgtcctaatttataagctaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 38187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 47807402 - 47807299
Alignment:
Q  204 taaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtg 303  Q
    ||||||||||||  |||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||  |||||||||||| |||||||||||||||    
T  47807402 taaaaagatactttctccgtcctaatttataagcaaaaa-cactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtg 47807304  T
Q  304 ttctc 308  Q
    |||||    
T  47807303 ttctc 47807299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 37788651 - 37788553
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||  | |||||||||||| |||||| | |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  37788651 tactccctctctcctaatttataagcaaaaaatattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 37788553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 51495349 - 51495253
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||| | ||| |||||||| ||||||||||||||||||||    
T  51495349 atactccctccgtcctaatttataag-aaaaaacactaattcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctc 51495253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 32012239 - 32012345
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtg 303  Q
    |||||| |||| |||| |||| |||||||||| |||||| || |||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||    
T  32012239 aaaaagctacttcctctgttcaaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtg 32012338  T
Q  304 ttctcct 310  Q
    |||||||    
T  32012339 ttctcct 32012345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 1620231 - 1620131
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcc 309  Q
    |||||||||| ||||||||||||||  |||||| ||||||||||||||||||||| ||  ||||| ||||||||||||  ||| ||||||||||||||||    
T  1620231 atactccctcggttctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgatttgagatatcattttttgtgttctcc 1620132  T
Q  310 t 310  Q
    |    
T  1620131 t 1620131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 38941038 - 38940971
Alignment:
Q  243 acactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||    
T  38941038 acactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcct 38940971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 53677566 - 53677653
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  53677566 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 53677653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 49902060 - 49901975
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||||| ||||||| ||||       |||||||||||||| ||||||||||| |||||||||||    
T  49902060 ggagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataataacataaaagtt 49901975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 30776571 - 30776658
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       | |||| ||||||| ||||||||||| |||||||||||||    
T  30776571 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagttgg 30776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 30777520 - 30777433
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       | |||| ||||||| ||||||||||| |||||||||||||    
T  30777520 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagttgg 30777433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 52713220 - 52713162
Alignment:
Q  247 taattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52713220 taattcatatttattaagaaaactaatacttagtgatttgaagtataattttttgtgtt 52713162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 3043254 - 3043340
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  3043254 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttg 3043340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 29180499 - 29180584
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||||| ||||||||||||       | |||| ||||||| ||||||||||| |||||||||||    
T  29180499 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacataataataacataaaagtt 29180584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 32012414 - 32012499
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||| ||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||    
T  32012414 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagtt 32012499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 38940900 - 38940815
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||| ||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  38940900 agaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 38940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 43980531 - 43980444
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| || ||||||||  ||||||||||||    
T  43980531 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaatataataatagcataaaagttgg 43980444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 52713096 - 52713009
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||| ||||    
T  52713096 ggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgg 52713009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 9798162 - 9798248
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||| ||||||| ||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  9798162 ggagaacacattgaatccaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttg 9798248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 461
Target Start/End: Original strand, 10591590 - 10591672
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    ||||||| |||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||    
T  10591590 ggagaaccaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa 10591672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 461
Target Start/End: Original strand, 39970076 - 39970158
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||| |||||| |||||||||||  |||||||    
T  39970076 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttggttgaaaaaacataataatagcataaaa 39970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 1620060 - 1619975
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||| ||||||| ||||||||||||       |||||||||||||| || ||||||||  ||||||||||||    
T  1620060 agaacaaattgaatgcaaattgcatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttgg 1619975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 5222212 - 5222308
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaa-ttcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||||   |||||||||| ||||||   ||| |||||||||||||||||||||||||  |||| ||||||  ||||||||||||||||||    
T  5222212 tactccctccgtctcaatttataagcaaaaaaatataaattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttct 5222308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 47807228 - 47807157
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataata 450  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||| ||||||| |||||||||    
T  47807228 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacataata 47807157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 50768478 - 50768391
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  50768478 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 50768391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 37788483 - 37788397
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  37788483 gagaacaaattaaatgcaagttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 37788397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 51495428 - 51495372
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaa 268  Q
    ||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||    
T  51495428 atactccctccgtcctaatttataag-aaaaaatattaattcacacttattaagaaaa 51495372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 466
Target Start/End: Original strand, 27750437 - 27750522
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  27750437 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacataaaaatagcataaaagttgg 27750522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 38187814 - 38187899
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||||||||||||||||| ||||||| ||||||||||||       ||||||||||||||  ||||| ||||  |||||||||||    
T  38187814 gagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacatactaatagcataaaagttg 38187899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 29899745 - 29899661
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  29899745 gaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 29899661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 27750265 - 27750361
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttat---taagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||  ||||||||||||| | |||||| | ||||| ||||||||   |||||||| ||| ||||||||||||||  ||| ||||||||||||    
T  27750265 tactccctaagttctaatttataggcaaaaaatattaatttacacttattattaagaaaattaacatttagtgatttgagatatgattttttgtgtt 27750361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 48793575 - 48793637
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    |||||||||||||| |||| ||||||| |||||||   || ||||||||||||||||||||||    
T  48793575 gatactccctccgtcctaaattataagaaaaaaaccaaaaatcacacttattaagaaaactaa 48793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 51495182 - 51495111
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataata 450  Q
    |||||| ||||||||||||||||||||| ||||||||||||       |||||||||| ||| |||||||||    
T  51495182 ggagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaaacataata 51495111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 55937790 - 55937877
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  55937790 ggagaacaaattaaatacaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatatcataaaagttgg 55937877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 30011872 - 30011967
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaac-actaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||| | |||||| ||||| ||||||  || | ||||||||||||||||||  ||| || | || |||||| |||||||||||||||||    
T  30011872 atactccctccatcctaattcataagcaaaaaaatacaatttcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgtt 30011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 415
Target Start/End: Original strand, 30012041 - 30012075
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||||||||||| ||||||||    
T  30012041 agaacaaattgaatgcaatttgcatttaattttac 30012075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 39078362 - 39078268
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||| | || ||||||| |||||| |  || |||||||||||||||||||||| |  ||   ||||| |||||| |||||||||||    
T  39078362 atactccctccgtcccaaattataagaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 39078268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 47868084 - 47867991
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||| |||| ||||||| ||||||    || |||||||||||||||||||||| |  ||   ||||| |||||| |||||||||||    
T  47868084 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 47867991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 5222380 - 5222416
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  5222380 ggagaacaaattcaatgcaatttgcatttaattttac 5222416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 3e-37; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 18852427 - 18852328
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||||||||    
T  18852427 atactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctcct 18852328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 23873783 - 23873882
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  23873783 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 23873882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 26907048 - 26907146
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  26907048 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctcct 26907146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 49924624 - 49924527
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  49924624 gatactccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 49924527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 18913301 - 18913400
Alignment:
Q  212 tactccctccgttctaatttataagtaaaa-aacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 15286005 - 15285908
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15286005 tactccatccgttctaatttataag-aaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctcct 15285908  T

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Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 209 - 310
Target Start/End: Complemental strand, 46949527 - 46949426
Alignment:
Q  209 agatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||||  |||||||||||||||||||    
T  46949527 agatactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctc 46949428  T
Q  309 ct 310  Q
    ||    
T  46949427 ct 46949426  T

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Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 29488952 - 29488853
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || | |||||||||||| ||||||||| ||||||||||||    
T  29488952 atactccctccgtcctaatttataagtcaaaaacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctcct 29488853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 26479944 - 26479844
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcc 309  Q
    ||||| |||||||||||||||||||| |||||| || ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  26479944 atacttcctccgttctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttctcc 26479845  T
Q  310 t 310  Q
    |    
T  26479844 t 26479844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 18036747 - 18036652
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||| | ||| |||||||| |||||||||||||||||||    
T  18036747 tactccctccgtcctaatttataagtaaaaaacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttct 18036652  T

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Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 25990952 - 25990853
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||||| ||| ||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  25990952 atactccctccgtcctaatttataagcaaaaaacattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 25990853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 28916473 - 28916567
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  28916473 tactccctccgccctaatttataag-aaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 28916567  T

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Target: chr1; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 40935569 - 40935668
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | |||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  40935569 atactccctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcct 40935668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 43655993 - 43656092
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||| ||||| |||||||| ||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  43655993 atactccatccgtcctaatttaaaagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 43656092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 44875382 - 44875284
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||| |||||| |||||||||||||||    
T  44875382 tactctctccgtcctaatttataagcaaaaaacactaattcacacttactaagaaaactaacacttagtgatttgaggtataaatttttgtgttctcct 44875284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 38942396 - 38942496
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcc 309  Q
    ||||| ||||||||||| |||||||| |||||| || |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||    
T  38942396 atacttcctccgttctattttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 38942495  T
Q  310 t 310  Q
    |    
T  38942496 t 38942496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 6848266 - 6848364
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||| | |||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||||||||||||||||    
T  6848266 atactccctccatcctaatttataagaaaaaaacactaattcacatttattaa-aaaactaataattagtgatttgaggtatgattttttgtgttctcct 6848364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 15311381 - 15311282
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||    
T  15311381 atacttcctccgtcataatttataagcataaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctcct 15311282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 28017860 - 28017769
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    |||||||||| || |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  28017860 atactccctctgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 28017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 40960430 - 40960529
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| | || |||||||||||||||||    
T  40960430 atactccttccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctcct 40960529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 9128246 - 9128148
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||| ||| | |||||||||||| ||||| ||||||||||||||||    
T  9128246 tactccatccgtcctaatttataagtaaaaaatattaattcacacttattaagaaaattaacacttagtgatttgaggtatacttttttgtgttctcct 9128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 217 - 310
Target Start/End: Complemental strand, 35942039 - 35941946
Alignment:
Q  217 cctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| | |||||| ||||||||||||||| ||||||    
T  35942039 cctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctcct 35941946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 39026201 - 39026298
Alignment:
Q  211 atactccctccgttctaatttataagtaaaa-aacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||| | || ||||||||| |||||||||||||||||||    
T  39026201 atactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttct 39026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 40220262 - 40220161
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatt---tagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||||| |||||||| ||| |||||||| |||||||||||||||||||||||||| | |   ||||||||||| ||||||||||||||||||||    
T  40220262 tactccctccgtcctaatttacaagcaaaaaacagtaattcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttctc 40220163  T
Q  309 ct 310  Q
    ||    
T  40220162 ct 40220161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 31970266 - 31970364
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| ||||| |||||||||||| |||||| |||||||||||||||||||||| | ||| | |||||||||||| |||| |||||||||||||||||    
T  31970266 tactccttccgtcctaatttataagcaaaaaatactaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctcct 31970364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 43656161 - 43656247
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||||||||||||||||    
T  43656161 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacataaaagttg 43656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 45357825 - 45357928
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacac--taattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    ||||| ||| ||||||||| |||||||||||| |||||| ||  ||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||    
T  45357825 aaaaatataatccctccgtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgatttgaggtataattttttgt 45357924  T
Q  303 gttc 306  Q
    ||||    
T  45357925 gttc 45357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 47997140 - 47997064
Alignment:
Q  229 tttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||    
T  47997140 tttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtattattttttgtgtt 47997064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 211 - 287
Target Start/End: Complemental strand, 4529379 - 4529304
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttga 287  Q
    ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  4529379 atactccatccgttctaatttataag-aaaaaacactaattcatacttattaagaaaactaacacttagtgatttga 4529304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 35189409 - 35189309
Alignment:
Q  208 aagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaag-aaaactaatatttagtgatttgaagtataattttttgtgttc 306  Q
    |||| ||| ||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||| | ||||| |||||| |||||||||||| |||||    
T  35189409 aagacacttcctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttc 35189310  T
Q  307 t 307  Q
    |    
T  35189309 t 35189309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 44875215 - 44875128
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  44875215 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 44875128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 46949357 - 46949270
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||| ||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  46949357 ggagaacaaattgaatacaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataataacataaaagttgg 46949270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 15285839 - 15285753
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||| ||||||| ||||    
T  15285839 gagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatggcataaaaattgg 15285753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 18852256 - 18852175
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagt 463  Q
    ||||||||||||||||||||||||| ||||||||||||       | |||||||||||| ||||||||||||||||||||||    
T  18852256 gaacaaattgaatgcaatttgcatttaattttacattggaaaaaataatttgtttgaaaaaacataataatgacataaaagt 18852175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 25990784 - 25990697
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||| ||||    
T  25990784 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaaattgg 25990697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 26479775 - 26479688
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| |||||||||||||| |||||||||||||||||       |||||||||||||| || ||||||||| ||||||||||||    
T  26479775 ggagaacatattgaatgcaattttcattgaattttacattggaaaagatgatttgtttgaaaaaatataataatggcataaaagttgg 26479688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 23873952 - 23874038
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||| ||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  23873952 gagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 23874038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 28017694 - 28017608
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||| ||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  28017694 ggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttg 28017608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 36037441 - 36037380
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    ||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||||||||    
T  36037441 atactccctccgtcccaatttataagcaaaaaacacaaattcacacttattaagaaaactaa 36037380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 38942565 - 38942651
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||| ||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  38942565 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacataataatagcataaaagttg 38942651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 465
Target Start/End: Complemental strand, 35941876 - 35941791
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||||||||||||||||||||| ||| ||||||||||||       |||||||||||||| |||||||||||  |||||||||||    
T  35941876 gagaacaaattgaatgcaatttgtatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttg 35941791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 465
Target Start/End: Complemental strand, 4529221 - 4529137
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||||| ||||||||||||       |||||| ||||||| |||||||||||  |||||||||||    
T  4529221 agaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttatttgaaaaaacataataatagcataaaagttg 4529137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 18036580 - 18036493
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||||||||||||||||||| |||||||| |||       |||||||||||||| |||||||||||  ||||||||||||    
T  18036580 ggagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 18036493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 26907213 - 26907300
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||||||||||||||||||| ||||||||||||       | |||||||||||| |||||||||||  ||||||||||||    
T  26907213 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacataataatagcataaaagttgg 26907300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 28916641 - 28916724
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||| ||||||| ||||       |||||||||||||| |||||||||||  ||||||||||    
T  28916641 agaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtt 28916724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 29488784 - 29488697
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||| ||||||| ||||||||||||       | |||||||||||| |||||||||||  ||||||||||||    
T  29488784 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaatattatttgtttgaaaaaacataataatagcataaaagttgg 29488697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 31970433 - 31970519
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       ||||||||||||||  |||||| ||| ||||||||||||    
T  31970433 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaagacataaaaataacataaaagttg 31970519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 461
Target Start/End: Complemental strand, 40220092 - 40220011
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||||||||||||||||||||||||| ||||||||||||       | |||||||||||| |||||||||||  |||||||    
T  40220092 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat-atttgtttgaaaaaacataataatagcataaaa 40220011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 40960598 - 40960684
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||||||    
T  40960598 ggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttg 40960684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 461
Target Start/End: Complemental strand, 47996990 - 47996908
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||||||||||||| ||||||| ||| ||||||||||||       |||||||||||||| |||||||||||  |||||||    
T  47996990 ggagaacaaattgaatacaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa 47996908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 9128072 - 9127992
Alignment:
Q  386 aaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||| |||| ||||||||||||       |||||||||||||| || ||||||||  ||||||||||||    
T  9128072 aaattgaatgcaatttacatttaattttacattgaaaaagatgatttgtttgaaaaaatataataatagcataaaagttgg 9127992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 35884382 - 35884319
Alignment:
Q  244 cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||| |||||| ||||||||||||||||   ||||| |||||| |||||||||||||||||||    
T  35884382 cactagttcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttct 35884319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 40935737 - 40935823
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||  ||||||| |||  |||||||||||    
T  40935737 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaagaaacataaaaatagcataaaagttg 40935823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 49924455 - 49924369
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| |||| || ||||||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||||||    
T  49924455 ggagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttg 49924369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 36384132 - 36384076
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaa 267  Q
    ||||||||||||| | |||||||||| |||||| || | ||||||||||||||||||    
T  36384132 atactccctccgtcccaatttataagcaaaaaatacaatttcacacttattaagaaa 36384076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 15959596 - 15959687
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||| | || |||||||||||||| |  || ||||| |||||||||||||||| |  ||   ||||| ||||||||||||||||||    
T  15959596 tactccctccgtcccaaattataagtaaaaaaaa--aaatcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 15959687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 448
Target Start/End: Original strand, 18913472 - 18913539
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataa 448  Q
    |||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| |||||||    
T  18913472 agaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataa 18913539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 24190676 - 24190583
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||| | || ||||||| ||||||||  ||| ||||||||||||||||||||| |  ||   ||||| |||||| |||||||||||    
T  24190676 atactccctccgtcccaaattataagaaaaaaacaaaaat-cacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 24190583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 39026370 - 39026457
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||       |||||| ||||||| ||||||| |||  ||||||||||||    
T  39026370 ggagaataaattaaatgcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacataaaaatagcataaaagttgg 39026457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 24728579 - 24728640
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    ||||||||||||| |||| ||||||| ||||||    || ||||||||||||||||||||||    
T  24728579 atactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 24728640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 465
Target Start/End: Complemental strand, 36383960 - 36383878
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgttt-gaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||| |||||||| |||       |||||| ||| |||| ||||||||||| ||||||||||||    
T  36383960 aacaaattgaatgcaatttgcatttaattttactttg-gaaagatgatttttttagaaaaaacataataataacataaaagttg 36383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 4e-36; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 43107814 - 43107915
Alignment:
Q  209 agatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  43107814 agatactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 43107913  T
Q  309 ct 310  Q
    ||    
T  43107914 ct 43107915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 9818671 - 9818572
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  9818671 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcct 9818572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 10720596 - 10720497
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  10720596 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcct 10720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 21654032 - 21654131
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||  ||| |||||||||||||||||    
T  21654032 atactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctcct 21654131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 18206231 - 18206329
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||    
T  18206231 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 18206329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 35181394 - 35181296
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||||||||    
T  35181394 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcct 35181296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 41889373 - 41889275
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||    
T  41889373 tactccctccgttctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctcct 41889275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 3157638 - 3157542
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  3157638 tactccctccgtcctaatttataagcaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 3157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 7989219 - 7989318
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  7989219 tactccctccgttctattttataagtaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 7989318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 23106656 - 23106557
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  23106656 atactccctccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 23106557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 19932967 - 19933065
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  19932967 tactctctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcct 19933065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 44600649 - 44600550
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| | |||| ||||||| ||||||||||||||||||||||    
T  44600649 atacttcctccgttctaatttataagcaaaaaatactaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctcct 44600550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 48879590 - 48879492
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||| |||||||| |||||||||||||| |||||||    
T  48879590 tactccatccgttctaatttataagcaaaaaacactaatttacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctcct 48879492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 310
Target Start/End: Original strand, 22111248 - 22111340
Alignment:
Q  219 tccgttctaatttataagtaaaa-aacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  22111248 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 22111340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 40583341 - 40583249
Alignment:
Q  219 tccgttctaatttataagtaaaa-aacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  40583341 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 40583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 32491018 - 32491117
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| |||| | |||||||||||| |||||||||||||||||| |||||||||||||||| | || ||||||||| ||||||||||||||||||||||    
T  32491018 atactctctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctcct 32491117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 42617874 - 42617775
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||||| | ||| |||||||| ||||||||||||||||||||||    
T  42617874 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctcct 42617775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 47383609 - 47383510
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||| | ||| ||||||||  |||||||||||||||||||||    
T  47383609 atactccctccgtcctaatttataagcaaaaaacacaaattcacacatattaagaaaactaacacttaatgatttgagatataattttttgtgttctcct 47383510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 40560591 - 40560486
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    ||||| ||||||||||||| |||||||||||| |||||||| ||||| ||||||||||| |||||||| | ||| | |||||| ||||||||||||||||    
T  40560591 aaaaaaatactccctccgtcctaatttataagcaaaaaacattaatttacacttattaaaaaaactaacacttaataatttgaggtataattttttgtgt 40560492  T
Q  305 tctcct 310  Q
    ||||||    
T  40560491 tctcct 40560486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 41815615 - 41815703
Alignment:
Q  222 gttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||||| |||||| | ||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  41815615 gttctaatttataagcaaaaaataataattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 41815703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 310
Target Start/End: Original strand, 41890162 - 41890253
Alignment:
Q  218 ctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| |||||||  ||||||||||||||||||||||    
T  41890162 ctccgtcctaatttataag-aaaaaacactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctcct 41890253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 41889206 - 41889120
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||||||||||||||||||||||| |||||||||||||||       |||||||||||||| |||||||||||| |||||||||||    
T  41889206 ggagaacaaattgaatgcaatttgctttgaattttacattggaaaagatgatttgtttgaaaaaacataataatggcataaaagttg 41889120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 22111409 - 22111496
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  22111409 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacataaaagttgg 22111496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 23731761 - 23731664
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaac--taatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||| |||||||||||  ||||||| |||||||||| |||||||||||||  ||| | |||||||||||| |||| |||||||||||||||||    
T  23731761 tccctccgtcctaatttataaaaaaaaaacgctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctcct 23731664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 35181227 - 35181140
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  35181227 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 35181140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 40583180 - 40583093
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  40583180 ggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacataataataacataaaagttgg 40583093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 48879423 - 48879336
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||| ||||||| ||||||||||| |||||||||||||    
T  48879423 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttttttgaaaaaacataataataacataaaagttgg 48879336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 23106488 - 23106403
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||    
T  23106488 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagtt 23106403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 34808251 - 34808167
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||||||||| |||||||| |||       |||||||||||||| ||||||||||| |||||||||||||    
T  34808251 gaacaaattgaatgcaatttgcatttaattttacgttgaaaaagatgatttgtttgaaaaaacataataataacataaaagttgg 34808167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 43107984 - 43108072
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||| ||||||||||| |||||||||||||    
T  43107984 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaacataataataacataaaagttgg 43108072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 21654200 - 21654287
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||| |||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  21654200 ggagaacaaattgaatgtaatttgcatttaattttacattggaaaaggtgatttgtttgaaaaaacataataatagcataaaagttgg 21654287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 34808384 - 34808326
Alignment:
Q  249 attcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  34808384 attcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttct 34808326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 461
Target Start/End: Complemental strand, 45598939 - 45598857
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  |||||||    
T  45598939 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaa 45598857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 45599109 - 45599019
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacac--taattcacacttattaagaaaactaatatttagtgatttgaagtataatttttt 300  Q
    |||||| ||||| |||||||||||  |||||| ||  |||||| ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  45599109 tactccttccgtcctaatttataaacaaaaaaaacagtaattcgcacttattaagaaaactaacacttagtgatttgaggtataatttttt 45599019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 47383441 - 47383354
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| |||||||||||||||| |||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  47383441 ggagaataaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatatcataaaagttgg 47383354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 29235980 - 29236037
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaa 268  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||| ||||||||||    
T  29235980 atactccctccgtcctaatttataagcaaaaaacacaaattcacactcattaagaaaa 29236037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 44600480 - 44600394
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||| ||||||| ||||||||| ||       |||||| ||||||| ||||||||||| |||||||||||||    
T  44600480 gagaacaaattgaatgcaacttgcatttaattttacactggaaaagatgatttatttgaaaaaacataataataacataaaagttgg 44600394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 464
Target Start/End: Complemental strand, 36576453 - 36576368
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||| ||||||| ||||||||||||       |||||| ||||||| |||||||||||  ||||||||||    
T  36576453 ggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacataataatagcataaaagtt 36576368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 33153241 - 33153146
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||| ||||||| | ||||||||||||||||| |  |||||||||||||||| ||||| || |  || |  |||||||||||||||||||||||||    
T  33153241 tacttcctccgtcccaatttataagtaaaaaatataaattcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttct 33153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 48937805 - 48937899
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||  ||||||||||  ||||||||| |||||| |||||||||||||||  | | ||||||  |||| ||||||||||||||||||||||    
T  48937805 tccctccgtcttaatttataaacaaaaaacacaaattcatacttattaagaaaacatacacttagtg-gttgaggtataattttttgtgttctcct 48937899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 35084006 - 35084108
Alignment:
Q  206 aaaagatactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgt 304  Q
    |||| ||||||||||||| | |||||||||| |||||| ||| |||||||||||| |||||||||||| |   ||| ||||||  |||| ||||||||||    
T  35084006 aaaatatactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgt 35084105  T
Q  305 tct 307  Q
    |||    
T  35084106 tct 35084108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 19964151 - 19964204
Alignment:
Q  257 ttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||||||| | |||||||||||| |||| |||||||||||||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcct 19964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 23731595 - 23731509
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||||||    
T  23731595 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttg 23731509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 36576585 - 36576529
Alignment:
Q  245 actaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgt 302  Q
    |||||||||||||||| ||||||||||| | |||||||||||| ||||||||||||||    
T  36576585 actaattcacacttat-aagaaaactaacacttagtgatttgaggtataattttttgt 36576529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 40594021 - 40593964
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaa 268  Q
    ||||||||||||| |||||||||||| |||||| || |||||||| ||||||||||||    
T  40594021 atactccctccgtcctaatttataagcaaaaaatacaaattcacatttattaagaaaa 40593964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 41815772 - 41815858
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||| || |||| ||||||||||||       |||||| ||||||| |||||||||||  |||||||||||    
T  41815772 ggagaacaaattgaatgcaacttacatttaattttacattggaaaatatgatttatttgaaaaaacataataatagcataaaagttg 41815858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 3157467 - 3157386
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||| ||||||| ||||||||||||       ||||||||||||||  ||||||||||  ||||||||||    
T  3157467 aacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacataataatagcataaaagtt 3157386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 19933134 - 19933219
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||    
T  19933134 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtt 19933219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 464
Target Start/End: Original strand, 19964273 - 19964358
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||    
T  19964273 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagtt 19964358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 42617706 - 42617633
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataat 452  Q
    |||| ||||||||||||||||||||||| ||||||||||||       | |||||||||||| |||||||||||    
T  42617706 ggagcacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataat 42617633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 33153074 - 33153038
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||||||||||||||||||| ||||||||    
T  33153074 ggagaacaaattgaatgcaatttgcatttaattttac 33153038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 465
Target Start/End: Original strand, 48937970 - 48938055
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||| ||| ||||||||||||       ||||||||||| ||| |||||||||||  || ||||||||    
T  48937970 agaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcacaaaagttg 48938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 465
Target Start/End: Original strand, 48942996 - 48943081
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttg-aaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||| ||| ||||||||||||       ||||||||||| ||| |||||||||||  || ||||||||    
T  48942996 agaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaaacataataatagcacaaaagttg 48943081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 25944785 - 25944690
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaat-tcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||||||||| ||||||| |||||| |  ||  | |||||||||||||||||||| || ||   ||||| ||||||| ||||||||||    
T  25944785 atactccctccgttctaaattataagcaaaaaaaaaaaaaataacacttattaagaaaactaaaatataagaatttggagtataagtttttgtgtt 25944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 415
Target Start/End: Complemental strand, 28608407 - 28608372
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttac 415  Q
    ||||||||||||||||||||||||||| ||||||||    
T  28608407 gagaacaaattgaatgcaatttgcatttaattttac 28608372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 298
Target Start/End: Complemental strand, 30082538 - 30082467
Alignment:
Q  227 aatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttt 298  Q
    |||||||| | ||||||||| |||||||||||||||||||||| || |  ||||  ||||| ||||||||||    
T  30082538 aatttataggcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 30082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 18102738 - 18102644
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||| || | || ||||||| |||||| |  || |||||||||||||||||||||| |  ||   ||||| ||||||||||||||||||    
T  18102738 atactccctctgtcccaaattataagcaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 18102644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 39348824 - 39348737
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||| ||||||||||| |||||||| |||       | | || |||||||||||| ||||||  ||||||||||||    
T  39348824 ggagaacaaattgaatacaatttgcatttaattttactttggaaaagattaattttttgaaacaacacaataatagcataaaagttgg 39348737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 18800694 - 18800735
Alignment:
Q  227 aatttataagtaaaaaacactaattcacacttattaagaaaa 268  Q
    |||||||||| |||||| || |||||||||||||||||||||    
T  18800694 aatttataagcaaaaaatacaaattcacacttattaagaaaa 18800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 35923455 - 35923398
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    ||||||||| |||| ||||||||||||||    || ||||||||||||||||||||||    
T  35923455 tccctccgtcctaaattataagtaaaaaaataaaaatcacacttattaagaaaactaa 35923398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 461
Target Start/End: Complemental strand, 40560417 - 40560335
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaa 461  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  |||||||    
T  40560417 ggagaataaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaa 40560335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 41890323 - 41890360
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacatt 418  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  41890323 agaacaaattgaatgtaatttgcatttaattttacatt 41890360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 7989391 - 7989427
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  7989391 aacaaattgaatgcaacttgcatttaattttacattg 7989427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 448
Target Start/End: Original strand, 18206398 - 18206467
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataa 448  Q
    |||||||||||| ||| ||| ||||||| ||||||||||||       |||||||||||||| |||||||    
T  18206398 ggagaacaaattaaatacaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataa 18206467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 22369385 - 22369325
Alignment:
Q  250 ttcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||||||||||||| || | ||  |||| |||||| ||||||||||| ||||    
T  22369385 ttcacacttattaagaaaactaaaatattgtagtttgtagtatagttttttgtgttatcct 22369325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 22632296 - 22632236
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    |||||||||||| | || ||||||||||||||    || ||||||||||||||||||||||    
T  22632296 tactccctccgtcccaaattataagtaaaaaaataaaaatcacacttattaagaaaactaa 22632236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 35084180 - 35084216
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttac 415  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  35084180 ggagaacaaattcaatgcaatttgcatttaattttac 35084216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 4834 - 4735
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||    
T  4834 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcct 4735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 4666 - 4580
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||| ||||||||||||||||||| ||||||| ||||       ||||||||||| || |||||||||||  ||||||||||||    
T  4666 ggagaacacattgaatgcaatttgcatttaattttatattg-gaaagatgatttgtttggaaaaacataataatagcataaaagttgg 4580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 6e-35; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 42365240 - 42365145
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| ||| |||||||||||||||    
T  42365240 tactccctccgttctaatttataagtaaaaaacactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttct 42365145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 31316755 - 31316853
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  31316755 tactccctccgtcctaatttataagcaaaaaacactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31316853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 25962401 - 25962500
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| |||||| | |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  25962401 atactccctccgtcctaatttataagcaaaaaagaataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 25962500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 35462672 - 35462771
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |||||||    
T  35462672 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctcct 35462771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 8145967 - 8146065
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||    
T  8145967 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcct 8146065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 12639093 - 12638996
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  12639093 tacttcctccgtcctaatttataag-aaaaaacactaattcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctcct 12638996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 16286037 - 16286133
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||    
T  16286037 tacttcctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctc 16286133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 210 - 308
Target Start/End: Complemental strand, 13146936 - 13146838
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctc 308  Q
    |||||||| |||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||||||    
T  13146936 gatactccatccgttctaatttataagcaaaaaatactaattcatacttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctc 13146838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 30086499 - 30086600
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaa-cactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttttt-gtgttctc 308  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||||||    
T  30086499 atactccctccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagtaatttgaggtataattttttcgtgttctc 30086598  T
Q  309 ct 310  Q
    ||    
T  30086599 ct 30086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 8541521 - 8541613
Alignment:
Q  215 tccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  8541521 tccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattct 8541613  T

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Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 31690573 - 31690669
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||||| |||||  ||||||||||| |||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  31690573 atactccttccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttct 31690669  T

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Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 20915065 - 20914966
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    |||||||||| || |||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||||| |  |||||||||||||||||||||    
T  20915065 atactccctctgtgctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctcct 20914966  T

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Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 24432353 - 24432452
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttctcct 310  Q
    ||||| |||||||  ||||||||||  |||||| | |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  24432353 atacttcctccgtcttaatttataataaaaaaagattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 24432452  T

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Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 8146135 - 8146221
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  8146135 gagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttgg 8146221  T

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Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 8541685 - 8541772
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||||||||||||||| ||||||||||||       |||||||||||||| ||||||||||| |||||||||||||    
T  8541685 ggagaacaaatttaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataataacataaaagttgg 8541772  T

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Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 30086669 - 30086756
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||| ||||||||||||||||| ||| ||||||||||||       |||||||||||||| |||||||||||||||||||||||||    
T  30086669 ggagaataaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacataataatgacataaaagttgg 30086756  T

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Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Original strand, 31690741 - 31690828
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||||||||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  31690741 ggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 31690828  T

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Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 13146766 - 13146680
Alignment:
Q  380 gagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||||||||||||| |||| ||||||||||||       |||||||||||||| |||||||||||  ||||||||||||    
T  13146766 gagaacaaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacataataatagcataaaagttgg 13146680  T

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Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 36413890 - 36413983
Alignment:
Q  212 tactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    |||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||| || |  ||||  |||||  ||||||||||||||||    
T  36413890 tactccctccgtcctaatttataaacaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtt 36413983  T

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Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 12638925 - 12638842
Alignment:
Q  381 agaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagtt 464  Q
    |||||||||||||||||||||||||| ||||||||||||       | |||||||||||| |||||||||||  ||||||||||    
T  12638925 agaacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacataataatagcataaaagtt 12638842  T

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Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 37066206 - 37066272
Alignment:
Q  241 aaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgttct 307  Q
    ||||| |||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| ||||    
T  37066206 aaacagtaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattct 37066272  T

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Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 298
Target Start/End: Original strand, 2002104 - 2002175
Alignment:
Q  227 aatttataagtaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgaagtataatttt 298  Q
    |||||||||| ||||||||| |||||||||||||||||||||| || || ||||   |||||||||||||||    
T  2002104 aatttataagaaaaaaacacaaattcacacttattaagaaaacaaaaatatagtagcttgaagtataatttt 2002175  T

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Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 20914897 - 20914810
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| |||  ||||||||||||    
T  20914897 ggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataaaaatagcataaaagttgg 20914810  T

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Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 419
Target Start/End: Complemental strand, 42365073 - 42365033
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  42365073 ggagaacaaattgaatgcaatttgcatttaattttacattg 42365033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 466
Target Start/End: Original strand, 35462846 - 35462926
Alignment:
Q  386 aaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttgg 466  Q
    |||||||||| |||||||||| ||||||||||||       || ||||||||||| |||||||||||  ||||||||||||    
T  35462846 aaattgaatgaaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacataataatagcataaaagttgg 35462926  T

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Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 465
Target Start/End: Original strand, 31316925 - 31317008
Alignment:
Q  382 gaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgtttgaaacaacataataatgacataaaagttg 465  Q
    ||||| ||| ||||||| ||||||| ||||||||||||       |||||||||||||| ||||||| ||| ||||||||||||    
T  31316925 gaacagattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacataaaaataacataaaagttg 31317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 465
Target Start/End: Complemental strand, 24439610 - 24439524
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattgnnnnnnntgatttgt-ttgaaacaacataataatgacataaaagttg 465  Q
    |||||||||||||||||||||||||||| |||||||| |||       |||||| | |||||| ||||||||||| ||||||||||||    
T  24439610 ggagaacaaattgaatgcaatttgcatttaattttactttg-gaaagatgatttttgttgaaaaaacataataataacataaaagttg 24439524  T

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Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 24439778 - 24439726
Alignment:
Q  211 atactccctccgttctaatttataagtaaaaaacactaattcacacttattaa 263  Q
    |||||| |||||| |||||||||||| ||||||||| | ||||||||||||||    
T  24439778 atactcactccgtcctaatttataagcaaaaaacacaatttcacacttattaa 24439726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 37066348 - 37066384
Alignment:
Q  383 aacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37066348 aacaaattgaatgcaatttgcatttaattttacattg 37066384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 414
Target Start/End: Original strand, 2002254 - 2002289
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaatttta 414  Q
    |||||||||||||||||||||||||||| |||||||    
T  2002254 ggagaacaaattgaatgcaatttgcatttaatttta 2002289  T

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Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 20039273 - 20039216
Alignment:
Q  248 aattcacacttattaagaaaactaatatttagtgatttgaagtataattttttgtgtt 305  Q
    ||||||||||||||||||||||||| |  ||   ||||| ||||||||||||||||||    
T  20039273 aattcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 20039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 17825319 - 17825359
Alignment:
Q  379 ggagaacaaattgaatgcaatttgcattgaattttacattg 419  Q
    |||| |||||||||||| |||||||||| ||||||||||||    
T  17825319 ggaggacaaattgaatgtaatttgcatttaattttacattg 17825359  T

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Target: scaffold0300 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 520 - 587
Alignment:
Q  205 aaaaagatactccctccgttctaatttataagtaaaaaacactaat-tcacacttattaagaaaactaa 272  Q
    |||||| |||||||||||| |||| ||||||| |||||| || ||| ||||||||||||||||||||||    
T  520 aaaaaggtactccctccgtcctaaattataagcaaaaaa-acaaatatcacacttattaagaaaactaa 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 158002 - 157941
Alignment:
Q  210 gatactccctccgttctaatttataagtaaaaaacactaattcacacttattaagaaaactaa 272  Q
    ||||||||||||||||||| ||||||| |||||| |  || ||| ||||||||||||||||||    
T  158002 gatactccctccgttctaaattataagcaaaaaata-aaaatcatacttattaagaaaactaa 157941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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