View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17080_high_83 (Length: 229)
Name: NF17080_high_83
Description: NF17080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17080_high_83 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9486006 - 9485792
Alignment:
| Q |
1 |
cccctggatcatggtgggtacaagaagcatgtaataacaatgaattattcacacactgcacattgctattcatgtacacaccaaccattggtggtgaaga |
100 |
Q |
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| T |
9486006 |
cccctggatcatggtgggtacaagaagcatgtaataacaatgaattattcacacactgcacattgctattcatgtacacaccaaccattggtggtgaaga |
9485907 |
T |
|
| Q |
101 |
tattgttcttactttcttactttgatcatcatagcctttgatctttaaattttccattttgtgaagttgatttggnnnnnnnctagtttggattatttcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |
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| T |
9485906 |
tattgttcttactttcttactttgatcatcatagcctttgatctttaaattttccattttgtgaagttgatttggttttttcctagtttggattattttc |
9485807 |
T |
|
| Q |
201 |
atataagcacctttg |
215 |
Q |
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||| ||||||||||| |
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| T |
9485806 |
atacaagcacctttg |
9485792 |
T |
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