View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17080_low_56 (Length: 285)

Name: NF17080_low_56
Description: NF17080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17080_low_56
NF17080_low_56
[»] chr8 (46 HSPs)
chr8 (155-271)||(20887769-20887885)
chr8 (155-271)||(23597432-23597547)
chr8 (156-271)||(22173714-22173827)
chr8 (155-267)||(18721066-18721177)
chr8 (155-257)||(10664190-10664291)
chr8 (155-267)||(23644049-23644161)
chr8 (155-263)||(5584212-5584319)
chr8 (157-267)||(5980072-5980183)
chr8 (156-263)||(16954008-16954114)
chr8 (174-267)||(14421971-14422065)
chr8 (156-258)||(18825669-18825770)
chr8 (159-258)||(18824179-18824277)
chr8 (199-271)||(12583245-12583317)
chr8 (155-263)||(25591259-25591366)
chr8 (155-264)||(5538547-5538658)
chr8 (209-267)||(43681707-43681765)
chr8 (155-258)||(30645719-30645822)
chr8 (155-223)||(8911923-8911991)
chr8 (155-258)||(14188405-14188508)
chr8 (155-258)||(31986521-31986624)
chr8 (155-263)||(45155044-45155156)
chr8 (156-223)||(31284948-31285015)
chr8 (155-258)||(31981594-31981697)
chr8 (156-223)||(44026869-44026936)
chr8 (158-258)||(5964490-5964590)
chr8 (156-223)||(2560829-2560896)
chr8 (156-223)||(10498029-10498096)
chr8 (155-258)||(18695756-18695859)
chr8 (206-262)||(25231316-25231372)
chr8 (199-258)||(36710460-36710519)
chr8 (155-258)||(14589399-14589503)
chr8 (157-258)||(20262789-20262890)
chr8 (157-258)||(21049419-21049520)
chr8 (160-258)||(4868488-4868587)
chr8 (169-224)||(21279558-21279613)
chr8 (157-211)||(12516226-12516281)
chr8 (156-211)||(17931272-17931326)
chr8 (156-210)||(33419944-33419997)
chr8 (205-263)||(37681350-37681408)
chr8 (35-131)||(1482488-1482582)
chr8 (156-217)||(17012810-17012870)
chr8 (156-217)||(17544331-17544391)
chr8 (168-217)||(24435312-24435360)
chr8 (168-217)||(24445358-24445406)
chr8 (156-223)||(23612413-23612480)
chr8 (156-223)||(23619144-23619210)
[»] chr6 (50 HSPs)
chr6 (155-271)||(11187977-11188093)
chr6 (155-271)||(30655686-30655801)
chr6 (157-271)||(11729112-11729225)
chr6 (155-258)||(23381950-23382052)
chr6 (155-258)||(23384530-23384632)
chr6 (155-263)||(9954199-9954306)
chr6 (155-258)||(3596559-3596661)
chr6 (155-258)||(11402501-11402604)
chr6 (156-271)||(23842568-23842684)
chr6 (155-258)||(26942213-26942315)
chr6 (157-263)||(5737844-5737949)
chr6 (155-258)||(1125515-1125617)
chr6 (156-271)||(23848010-23848126)
chr6 (156-263)||(2379467-2379573)
chr6 (155-264)||(23008294-23008405)
chr6 (155-264)||(23779959-23780070)
chr6 (155-271)||(17106396-17106514)
chr6 (155-258)||(3826601-3826704)
chr6 (155-266)||(10290218-10290331)
chr6 (155-258)||(14966464-14966567)
chr6 (155-258)||(34502586-34502689)
chr6 (155-263)||(5260045-5260157)
chr6 (155-258)||(14969944-14970047)
chr6 (156-223)||(19476281-19476348)
chr6 (156-223)||(22560937-22561005)
chr6 (233-271)||(20185983-20186021)
chr6 (233-271)||(22149970-22150008)
chr6 (157-222)||(24410578-24410643)
chr6 (206-263)||(14281348-14281405)
chr6 (167-236)||(9839189-9839260)
chr6 (157-263)||(28107530-28107640)
chr6 (156-210)||(4512770-4512823)
chr6 (162-223)||(24400458-24400519)
chr6 (206-263)||(2372568-2372625)
chr6 (155-263)||(6514232-6514343)
chr6 (171-224)||(17696864-17696916)
chr6 (155-223)||(24155143-24155211)
chr6 (157-267)||(24371449-24371560)
chr6 (155-223)||(26896034-26896102)
chr6 (155-263)||(28111580-28111692)
chr6 (156-224)||(2331555-2331622)
chr6 (156-223)||(7128578-7128644)
chr6 (155-262)||(13005429-13005540)
chr6 (156-223)||(13947293-13947359)
chr6 (156-223)||(18855804-18855870)
chr6 (156-223)||(28230875-28230941)
chr6 (157-211)||(32109963-32110016)
chr6 (199-264)||(2846540-2846605)
chr6 (156-217)||(22920809-22920869)
chr6 (156-224)||(31123710-31123777)
[»] chr3 (73 HSPs)
chr3 (156-271)||(2775807-2775921)
chr3 (156-271)||(2779049-2779163)
chr3 (155-271)||(25584999-25585116)
chr3 (155-271)||(45896703-45896822)
chr3 (155-271)||(49742674-49742791)
chr3 (155-271)||(43927162-43927277)
chr3 (155-267)||(35412822-35412933)
chr3 (155-264)||(16184449-16184557)
chr3 (155-258)||(24125825-24125927)
chr3 (155-267)||(8461260-8461371)
chr3 (155-258)||(7486897-7486999)
chr3 (155-258)||(24129102-24129204)
chr3 (155-267)||(6922837-6922948)
chr3 (155-263)||(539147-539254)
chr3 (155-263)||(2873885-2873992)
chr3 (155-263)||(30691056-30691163)
chr3 (174-271)||(3840839-3840936)
chr3 (156-268)||(31549509-31549622)
chr3 (155-268)||(10106366-10106484)
chr3 (155-263)||(12541066-12541173)
chr3 (155-263)||(54724062-54724169)
chr3 (155-258)||(6434540-6434645)
chr3 (155-271)||(10902262-10902380)
chr3 (158-263)||(11190847-11190951)
chr3 (155-258)||(23298379-23298482)
chr3 (173-271)||(10881802-10881901)
chr3 (204-271)||(16244195-16244262)
chr3 (155-267)||(28007833-28007947)
chr3 (169-258)||(28266244-28266332)
chr3 (204-267)||(20728450-20728513)
chr3 (156-263)||(28327687-28327793)
chr3 (156-263)||(28331012-28331118)
chr3 (155-258)||(53816155-53816257)
chr3 (156-242)||(50461317-50461402)
chr3 (155-267)||(52309386-52309500)
chr3 (173-264)||(52200235-52200327)
chr3 (155-258)||(4250633-4250735)
chr3 (204-271)||(41977323-41977390)
chr3 (213-267)||(54461327-54461381)
chr3 (199-256)||(10885192-10885249)
chr3 (186-258)||(18641567-18641639)
chr3 (186-258)||(18644563-18644635)
chr3 (205-264)||(43809904-43809963)
chr3 (157-258)||(2279400-2279501)
chr3 (155-256)||(2784355-2784456)
chr3 (156-263)||(3306092-3306200)
chr3 (155-258)||(42354181-42354284)
chr3 (156-223)||(46885276-46885343)
chr3 (156-223)||(48063804-48063871)
chr3 (155-258)||(10960134-10960241)
chr3 (155-258)||(10963641-10963748)
chr3 (156-258)||(30157810-30157913)
chr3 (158-223)||(17531423-17531488)
chr3 (161-258)||(10967150-10967251)
chr3 (156-223)||(17528526-17528593)
chr3 (155-258)||(18883459-18883562)
chr3 (207-263)||(32287135-32287191)
chr3 (156-223)||(34983554-34983621)
chr3 (156-223)||(54720336-54720403)
chr3 (199-258)||(47055251-47055310)
chr3 (156-223)||(17039782-17039851)
chr3 (156-217)||(29233366-29233426)
chr3 (156-223)||(15195109-15195176)
chr3 (155-224)||(22993463-22993534)
chr3 (157-223)||(25486498-25486566)
chr3 (209-245)||(31857913-31857949)
chr3 (156-223)||(32366896-32366962)
chr3 (155-258)||(54735982-54736085)
chr3 (156-210)||(11785151-11785204)
chr3 (156-217)||(5886760-5886820)
chr3 (156-217)||(5896744-5896804)
chr3 (174-242)||(55034705-55034774)
chr3 (156-223)||(25442626-25442692)
[»] chr5 (42 HSPs)
chr5 (155-271)||(34832001-34832118)
chr5 (155-271)||(41876534-41876649)
chr5 (155-267)||(22936720-22936831)
chr5 (155-267)||(43491988-43492099)
chr5 (155-258)||(31863956-31864058)
chr5 (155-251)||(41306306-41306401)
chr5 (155-263)||(40915937-40916044)
chr5 (155-267)||(7271259-7271373)
chr5 (199-267)||(30066552-30066620)
chr5 (155-256)||(42063172-42063274)
chr5 (173-271)||(33552358-33552457)
chr5 (174-271)||(4099323-4099421)
chr5 (155-267)||(28787097-28787211)
chr5 (155-258)||(26752481-26752583)
chr5 (155-261)||(32838116-32838222)
chr5 (155-258)||(37215286-37215383)
chr5 (156-258)||(14015920-14016021)
chr5 (206-271)||(39192567-39192632)
chr5 (155-258)||(3195326-3195429)
chr5 (155-258)||(30764470-30764573)
chr5 (155-264)||(21332452-21332563)
chr5 (155-258)||(2453527-2453630)
chr5 (155-258)||(19686415-19686518)
chr5 (199-263)||(21335517-21335581)
chr5 (155-258)||(30761651-30761754)
chr5 (155-258)||(34652538-34652641)
chr5 (157-263)||(10629448-10629555)
chr5 (156-223)||(26907194-26907261)
chr5 (155-256)||(26548327-26548428)
chr5 (155-256)||(26551886-26551987)
chr5 (155-256)||(28562143-28562244)
chr5 (155-256)||(28565711-28565812)
chr5 (155-251)||(19689805-19689901)
chr5 (156-223)||(23044420-23044487)
chr5 (199-258)||(7625343-7625402)
chr5 (156-222)||(20056123-20056190)
chr5 (156-210)||(35049762-35049815)
chr5 (156-223)||(34132762-34132828)
chr5 (156-223)||(34142993-34143059)
chr5 (158-211)||(18952986-18953040)
chr5 (156-223)||(12088235-12088301)
chr5 (156-223)||(17664830-17664897)
[»] chr2 (56 HSPs)
chr2 (155-268)||(40781694-40781808)
chr2 (155-271)||(42368480-42368595)
chr2 (155-271)||(31585710-31585826)
chr2 (173-271)||(5105927-5106024)
chr2 (155-271)||(43207664-43207774)
chr2 (155-263)||(45499139-45499246)
chr2 (155-263)||(24238589-24238696)
chr2 (155-263)||(25871001-25871108)
chr2 (155-263)||(25874398-25874505)
chr2 (155-263)||(29440712-29440819)
chr2 (155-258)||(8888858-8888960)
chr2 (155-258)||(11347675-11347777)
chr2 (155-258)||(30274549-30274651)
chr2 (155-271)||(43723919-43724037)
chr2 (156-264)||(10601069-10601176)
chr2 (155-263)||(25959470-25959577)
chr2 (156-263)||(9185206-9185312)
chr2 (155-263)||(24235317-24235424)
chr2 (156-263)||(9188434-9188540)
chr2 (156-263)||(37279458-37279564)
chr2 (156-258)||(33310888-33310989)
chr2 (199-271)||(6826990-6827062)
chr2 (158-258)||(38015740-38015839)
chr2 (156-263)||(40677541-40677647)
chr2 (155-267)||(25138705-25138819)
chr2 (174-267)||(26366137-26366231)
chr2 (199-267)||(13971725-13971793)
chr2 (173-271)||(15470677-15470776)
chr2 (174-263)||(25820641-25820731)
chr2 (199-268)||(13137110-13137179)
chr2 (155-258)||(1503203-1503306)
chr2 (155-258)||(1506407-1506510)
chr2 (155-258)||(13518536-13518639)
chr2 (155-258)||(3252554-3252655)
chr2 (155-258)||(11060032-11060135)
chr2 (156-223)||(16179404-16179471)
chr2 (204-263)||(5666745-5666803)
chr2 (155-258)||(45457384-45457490)
chr2 (157-258)||(15719057-15719158)
chr2 (156-210)||(40258918-40258971)
chr2 (156-223)||(1386204-1386270)
chr2 (155-258)||(15703751-15703854)
chr2 (156-208)||(22631119-22631170)
chr2 (206-258)||(31427372-31427424)
chr2 (157-223)||(12220057-12220123)
chr2 (157-223)||(23205431-23205497)
chr2 (157-223)||(23677035-23677101)
chr2 (199-258)||(45454096-45454155)
chr2 (156-216)||(9966144-9966205)
chr2 (156-208)||(3875564-3875615)
chr2 (173-258)||(36808239-36808326)
chr2 (158-209)||(27267069-27267120)
chr2 (156-210)||(37936999-37937052)
chr2 (156-217)||(18939174-18939234)
chr2 (156-223)||(16790537-16790603)
chr2 (199-263)||(34682914-34682978)
[»] chr1 (30 HSPs)
chr1 (155-271)||(45941655-45941772)
chr1 (155-267)||(6070738-6070849)
chr1 (155-256)||(1950226-1950326)
chr1 (155-263)||(2794464-2794571)
chr1 (155-263)||(28111293-28111400)
chr1 (155-258)||(23021700-23021802)
chr1 (155-271)||(2405748-2405866)
chr1 (155-239)||(20448093-20448176)
chr1 (155-239)||(20533860-20533943)
chr1 (155-258)||(27536311-27536413)
chr1 (155-258)||(49498281-49498383)
chr1 (174-271)||(21110945-21111043)
chr1 (156-258)||(45960526-45960627)
chr1 (199-271)||(41058115-41058187)
chr1 (156-263)||(3796608-3796714)
chr1 (161-258)||(20399095-20399191)
chr1 (199-267)||(42022871-42022939)
chr1 (204-267)||(49852956-49853019)
chr1 (156-233)||(31205104-31205180)
chr1 (174-268)||(21018254-21018349)
chr1 (156-263)||(23441053-23441159)
chr1 (156-258)||(37183645-37183746)
chr1 (171-263)||(33898567-33898659)
chr1 (158-210)||(905463-905514)
chr1 (156-224)||(17902566-17902633)
chr1 (199-263)||(29643044-29643108)
chr1 (156-258)||(50196728-50196831)
chr1 (156-217)||(16838712-16838772)
chr1 (156-217)||(16848642-16848702)
chr1 (206-263)||(34732190-34732247)
[»] chr4 (70 HSPs)
chr4 (15-132)||(5558274-5558389)
chr4 (155-271)||(40902853-40902968)
chr4 (156-271)||(38283260-38283374)
chr4 (155-271)||(48415292-48415410)
chr4 (155-268)||(12238489-12238601)
chr4 (155-268)||(27676825-27676937)
chr4 (155-263)||(27014497-27014604)
chr4 (155-263)||(5673130-5673237)
chr4 (155-258)||(34319697-34319799)
chr4 (155-258)||(44808735-44808837)
chr4 (155-258)||(48637747-48637849)
chr4 (159-263)||(5670812-5670915)
chr4 (173-271)||(3720587-3720686)
chr4 (155-258)||(18911746-18911848)
chr4 (155-271)||(12786349-12786467)
chr4 (155-271)||(19820941-19821059)
chr4 (155-263)||(15432316-15432423)
chr4 (155-263)||(34017563-34017670)
chr4 (155-271)||(15445132-15445250)
chr4 (155-271)||(19827648-19827766)
chr4 (156-258)||(29325063-29325164)
chr4 (156-258)||(40616587-40616688)
chr4 (206-271)||(40795239-40795304)
chr4 (199-267)||(3797638-3797706)
chr4 (203-267)||(24043956-24044020)
chr4 (155-271)||(15429623-15429741)
chr4 (155-271)||(15436237-15436355)
chr4 (156-258)||(24150914-24151015)
chr4 (155-267)||(35510222-35510336)
chr4 (199-271)||(52006344-52006416)
chr4 (155-258)||(52530713-52530815)
chr4 (209-267)||(33408154-33408212)
chr4 (155-258)||(10386178-10386281)
chr4 (204-271)||(44165019-44165086)
chr4 (211-271)||(52005589-52005649)
chr4 (155-258)||(33927212-33927316)
chr4 (199-256)||(37103031-37103088)
chr4 (186-258)||(5706634-5706706)
chr4 (155-258)||(10248060-10248163)
chr4 (155-258)||(11702357-11702460)
chr4 (155-258)||(17670546-17670649)
chr4 (155-258)||(18860012-18860115)
chr4 (211-267)||(49270921-49270977)
chr4 (66-140)||(5848854-5848928)
chr4 (199-267)||(5681661-5681725)
chr4 (155-223)||(1388143-1388212)
chr4 (156-223)||(30392847-30392914)
chr4 (199-263)||(53094744-53094808)
chr4 (157-223)||(11195948-11196014)
chr4 (155-258)||(15404858-15404964)
chr4 (156-207)||(25962351-25962401)
chr4 (157-223)||(53009336-53009402)
chr4 (199-258)||(56199093-56199152)
chr4 (205-263)||(19859332-19859390)
chr4 (205-263)||(19864225-19864283)
chr4 (156-210)||(29544650-29544703)
chr4 (66-119)||(3748269-3748322)
chr4 (66-139)||(5857400-5857473)
chr4 (155-256)||(26060744-26060848)
chr4 (199-258)||(15811959-15812018)
chr4 (204-258)||(56195766-56195820)
chr4 (156-217)||(3719274-3719334)
chr4 (156-217)||(3734593-3734653)
chr4 (156-225)||(11561089-11561157)
chr4 (171-224)||(49636317-49636369)
chr4 (156-217)||(49639595-49639655)
chr4 (156-223)||(18672861-18672927)
chr4 (156-223)||(21420064-21420131)
chr4 (156-223)||(40493146-40493213)
chr4 (156-223)||(46955257-46955323)
[»] chr7 (46 HSPs)
chr7 (155-271)||(4543021-4543136)
chr7 (156-271)||(8277211-8277325)
chr7 (155-271)||(4547093-4547208)
chr7 (155-271)||(11919636-11919754)
chr7 (155-258)||(37415206-37415308)
chr7 (155-267)||(13449564-13449675)
chr7 (155-271)||(26557723-26557841)
chr7 (155-258)||(23224688-23224790)
chr7 (204-271)||(4595832-4595899)
chr7 (173-267)||(35961328-35961423)
chr7 (156-258)||(6603685-6603786)
chr7 (155-267)||(10345404-10345518)
chr7 (156-258)||(16165976-16166077)
chr7 (186-258)||(2441085-2441157)
chr7 (199-271)||(4695705-4695777)
chr7 (155-258)||(45286852-45286954)
chr7 (204-263)||(9864566-9864625)
chr7 (204-271)||(22611556-22611623)
chr7 (156-263)||(44017561-44017667)
chr7 (155-258)||(45290263-45290365)
chr7 (174-264)||(48645698-48645789)
chr7 (155-258)||(8398064-8398167)
chr7 (155-258)||(11825137-11825240)
chr7 (155-258)||(26153398-26153501)
chr7 (174-255)||(17731060-17731142)
chr7 (155-258)||(5826490-5826593)
chr7 (155-258)||(22232408-22232511)
chr7 (155-258)||(22254228-22254331)
chr7 (155-258)||(5796778-5796882)
chr7 (157-258)||(8258132-8258233)
chr7 (199-264)||(5241989-5242054)
chr7 (156-223)||(14683223-14683290)
chr7 (156-223)||(20080499-20080566)
chr7 (199-258)||(11397879-11397938)
chr7 (156-209)||(9132544-9132596)
chr7 (167-223)||(10469410-10469466)
chr7 (155-223)||(13842904-13842971)
chr7 (156-224)||(20100917-20100984)
chr7 (171-258)||(22257492-22257580)
chr7 (156-223)||(26135912-26135978)
chr7 (157-223)||(3067759-3067825)
chr7 (200-242)||(13907628-13907670)
chr7 (156-210)||(37165930-37165983)
chr7 (156-217)||(2252151-2252211)
chr7 (156-217)||(23598541-23598601)
chr7 (156-217)||(26460745-26460805)
[»] scaffold0005 (1 HSPs)
scaffold0005 (155-263)||(293254-293361)
[»] scaffold0381 (1 HSPs)
scaffold0381 (155-263)||(5179-5286)
[»] scaffold1208 (1 HSPs)
scaffold1208 (155-264)||(418-526)
[»] scaffold0962 (1 HSPs)
scaffold0962 (155-268)||(3061-3179)
[»] scaffold0427 (1 HSPs)
scaffold0427 (155-258)||(3566-3668)
[»] scaffold1785 (1 HSPs)
scaffold1785 (155-256)||(154-258)
[»] scaffold0690 (1 HSPs)
scaffold0690 (155-258)||(7494-7593)
[»] scaffold0035 (2 HSPs)
scaffold0035 (155-256)||(62764-62868)
scaffold0035 (156-223)||(64138-64205)
[»] scaffold1063 (1 HSPs)
scaffold1063 (174-267)||(2728-2822)
[»] scaffold0520 (2 HSPs)
scaffold0520 (206-271)||(8039-8104)
scaffold0520 (174-271)||(1336-1434)
[»] scaffold0757 (1 HSPs)
scaffold0757 (155-271)||(5589-5707)
[»] scaffold0250 (1 HSPs)
scaffold0250 (156-250)||(19645-19738)
[»] scaffold0080 (1 HSPs)
scaffold0080 (174-267)||(27352-27446)
[»] scaffold1809 (1 HSPs)
scaffold1809 (207-271)||(302-366)
[»] scaffold1755 (1 HSPs)
scaffold1755 (199-267)||(374-442)
[»] scaffold0412 (1 HSPs)
scaffold0412 (156-258)||(372-477)
[»] scaffold0007 (2 HSPs)
scaffold0007 (174-267)||(248761-248855)
scaffold0007 (156-266)||(92671-92781)
[»] scaffold0996 (1 HSPs)
scaffold0996 (155-263)||(1695-1807)
[»] scaffold0015 (1 HSPs)
scaffold0015 (199-271)||(198382-198453)
[»] scaffold0014 (2 HSPs)
scaffold0014 (155-258)||(228879-228982)
scaffold0014 (155-258)||(223953-224056)
[»] scaffold0360 (2 HSPs)
scaffold0360 (173-258)||(2687-2773)
scaffold0360 (157-258)||(6519-6620)
[»] scaffold2073 (1 HSPs)
scaffold2073 (155-263)||(640-752)
[»] scaffold0737 (1 HSPs)
scaffold0737 (155-257)||(7121-7224)
[»] scaffold0065 (1 HSPs)
scaffold0065 (158-223)||(58460-58524)
[»] scaffold0062 (2 HSPs)
scaffold0062 (157-258)||(67614-67715)
scaffold0062 (155-258)||(52663-52766)
[»] scaffold0214 (3 HSPs)
scaffold0214 (155-258)||(20301-20404)
scaffold0214 (171-250)||(13859-13939)
scaffold0214 (171-250)||(27875-27955)
[»] scaffold0002 (1 HSPs)
scaffold0002 (157-258)||(118227-118330)
[»] scaffold0045 (1 HSPs)
scaffold0045 (199-258)||(90010-90069)
[»] scaffold0807 (1 HSPs)
scaffold0807 (156-223)||(1850-1917)
[»] scaffold0218 (1 HSPs)
scaffold0218 (156-223)||(10684-10751)
[»] scaffold0191 (1 HSPs)
scaffold0191 (156-223)||(4193-4260)
[»] scaffold0084 (2 HSPs)
scaffold0084 (156-223)||(19557-19623)
scaffold0084 (156-223)||(29636-29702)
[»] scaffold0048 (1 HSPs)
scaffold0048 (156-223)||(15689-15755)
[»] scaffold0038 (1 HSPs)
scaffold0038 (156-223)||(31372-31438)
[»] scaffold0175 (1 HSPs)
scaffold0175 (156-217)||(28437-28497)
[»] scaffold0067 (1 HSPs)
scaffold0067 (156-217)||(27642-27702)
[»] scaffold0012 (1 HSPs)
scaffold0012 (156-217)||(26656-26716)


Alignment Details
Target: chr8 (Bit Score: 109; Significance: 7e-55; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 20887885 - 20887769
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20887885 agcaagtatactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaaggaaatatttaggatgtata 20887786  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  20887785 aattattttgtttagat 20887769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 23597547 - 23597432
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23597547 agcaagtatactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 23597449  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  23597448 aattattttgtttagat 23597432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 22173714 - 22173827
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||| |||||||||||| |||||  ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22173714 gcaagtgtaccaaa-actatcgaagtagtaaaat-tatcgtttccacgaggacagtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 22173811  T
Q  256 attattttgtttagat 271  Q
    ||||||||||||||||    
T  22173812 attattttgtttagat 22173827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 18721066 - 18721177
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| ||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  18721066 agcaagtatactaaatactattgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 18721164  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  18721165 aattattttgttt 18721177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 10664291 - 10664190
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  10664291 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 10664193  T
Q  255 aat 257  Q
    |||    
T  10664192 aat 10664190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 23644161 - 23644049
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    |||||||| |||||| ||||||||| |||||||| ||  ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23644161 agcaagtgaactaaa-actatcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 23644063  T
Q  254 aaattattttgttt 267  Q
    ||||||||||||||    
T  23644062 aaattattttgttt 23644049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 5584212 - 5584319
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||| ||||||||| ||||| || |||||||||||||| ||    
T  5584212 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttctcacgaggactgtgttaatttcaatttagcaataaggttaatatttaggatgtgta 5584310  T
Q  255 aattatttt 263  Q
    |||||||||    
T  5584311 aattatttt 5584319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 5980072 - 5980183
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||| ||| |||||||||||||||| | ||  ||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5980072 caagtgtaccaaaaactatcgaagtaataacataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataa 5980171  T
Q  256 attattttgttt 267  Q
    ||||||||||||    
T  5980172 attattttgttt 5980183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 16954114 - 16954008
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||| |  ||||| || |||||||||||||| |||    
T  16954114 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaattcaacaataacgttaatatttaggatgtgtaa 16954016  T
Q  256 attatttt 263  Q
    ||||||||    
T  16954015 attatttt 16954008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 14422065 - 14421971
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14422065 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagtaataaagtaaatatttaggatgtataaattattttgttt 14421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 18825669 - 18825770
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  18825669 gcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 18825767  T
Q  256 att 258  Q
    |||    
T  18825768 att 18825770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 18824179 - 18824277
Alignment:
Q  159 agtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  18824179 agtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 18824277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 12583317 - 12583245
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12583317 ccacgaggactatgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttgtttagat 12583245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 25591259 - 25591366
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||| |||||||||  ||||| ||||||||||||| |  |||||||||||||||||||||  |||| || |||||||||||||| ||    
T  25591259 agcaagtgtactaaatattatcgaagtggtaaaa-atatcgttcccacgaaaactgtgttaatctcaatttagcgataaggttaatatttaggatgtgta 25591357  T
Q  255 aattatttt 263  Q
    |||||||||    
T  25591358 aattatttt 25591366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 5538547 - 5538658
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5538547 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccatgaggactgtgttaatttcaatttagaaataaagtaaatatttaggatgta 5538646  T
Q  253 taaattattttg 264  Q
    |||| |||||||    
T  5538647 taaaatattttg 5538658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 43681707 - 43681765
Alignment:
Q  209 tgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  43681707 tgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttgttt 43681765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 30645822 - 30645719
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| | |||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||||||||| |||||||| |    
T  30645822 agcaagtgtactaaa-attatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtaaatatataggatgtgt 30645724  T
Q  254 aaatt 258  Q
    |||||    
T  30645723 aaatt 30645719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 8911991 - 8911923
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||||||    
T  8911991 agcaagtgtactaaatactatcgaagtagt-aaaaatatcgttcccacaaggactgattttaatctcaat 8911923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 14188508 - 14188405
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||| ||||||||||| |||| |||||||| ||||| |||||||| |    
T  14188508 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgcgttaatctcaacttagcaataaagttaatatctaggatgtgt 14188410  T
Q  254 aaatt 258  Q
    |||||    
T  14188409 aaatt 14188405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 31986624 - 31986521
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||   ||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  31986624 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 31986526  T
Q  254 aaatt 258  Q
    |||||    
T  31986525 aaatt 31986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 45155044 - 45155156
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||||||||||  |||     |||  ||||| |||| |||||||||||||||||| ||||| || ||||| ||||||    
T  45155044 agcaagtgtactaaa-actatcgaagtaataaaatttataagttcgtatccacagggaccgtgttaatctcaatttagcaataaggttaatatctaggat 45155142  T
Q  250 gtataaattatttt 263  Q
    || |||||||||||    
T  45155143 gtgtaaattatttt 45155156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 31285015 - 31284948
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||    
T  31285015 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactggttttaatctcaat 31284948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 31981697 - 31981594
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  | |  ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  31981697 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 31981599  T
Q  254 aaatt 258  Q
    |||||    
T  31981598 aaatt 31981594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 44026869 - 44026936
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||| | |||||||||||    
T  44026869 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactgattttaatctcaat 44026936  T

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Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 5964590 - 5964490
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 256  Q
    ||||||| |||| |||||||||||||||||| ||  ||||  |||  ||||||||||||||||||| |||| |||||||| ||||| |||||||| ||||    
T  5964590 aagtgtattaaa-actatcgaagtaataaaataagttcgtatccatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaa 5964492  T
Q  257 tt 258  Q
    ||    
T  5964491 tt 5964490  T

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Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 2560896 - 2560829
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||| ||| || |||||||||||    
T  2560896 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaagaactggttttaatctcaat 2560829  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 10498029 - 10498096
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||| |||||| || |||||||||||    
T  10498029 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacgaggactcgttttaatctcaat 10498096  T

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Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 18695756 - 18695859
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    |||||||| |||||| |||||||||||||||||| ||  ||||  |||| |||||| ||||||| |||| |||| |||||||| ||||| |||||||| |    
T  18695756 agcaagtgcactaaa-actatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaatatctaggatgtgt 18695854  T
Q  254 aaatt 258  Q
    |||||    
T  18695855 aaatt 18695859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 25231372 - 25231316
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattt 262  Q
    |||||||||||||||||||||| |||||  | ||||||||||||| |||||||||||    
T  25231372 gactgtgttaatctcaatttagcaataagtttaatatttaggatggataaattattt 25231316  T

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Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 36710460 - 36710519
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||| ||||||||||||||||||||||| |||||| | ||||| |||||||| ||||||    
T  36710460 ccacagggactgtgttaatctcaatttagcaataaatttaatatctaggatgtgtaaatt 36710519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 14589399 - 14589503
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| | ||||||||||||||||  ||  ||||   ||| |||||||||||||||||||||||| ||||| || ||| | ||||||||     
T  14589399 agcaagtgtactaaa-attatcgaagtaataaaattaagttcgtattcacgaggactgtgttaatctcaatttagcaataatgttaatgtgtaggatgtg 14589497  T
Q  253 taaatt 258  Q
    ||||||    
T  14589498 taaatt 14589503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 20262890 - 20262789
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| ||||||||||||||| |  ||  ||||  |||| | ||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  20262890 caagtgtactaaa-actatcgaagtaatacagtaagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 20262792  T
Q  256 att 258  Q
    |||    
T  20262791 att 20262789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 21049520 - 21049419
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| ||||||||||||||| |  ||  ||||  |||| | ||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  21049520 caagtgtactaaa-actatcgaagtaatacagtaagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 21049422  T
Q  256 att 258  Q
    |||    
T  21049421 att 21049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 4868587 - 4868488
Alignment:
Q  160 gtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaat 257  Q
    |||||||||| |||||||||||||||||||  |  ||||  | || |||| ||||||||| |||| |||| |||||||| |||||||||||||| |||||    
T  4868587 gtgtactaaa-actatcgaagtaataaaaataagttcgtatcaacgaggaatgtgttaatatcaaattagcaataaagttaatatttaggatgtgtaaat 4868489  T

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Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 21279558 - 21279613
Alignment:
Q  169 atactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaatt 224  Q
    |||||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||    
T  21279558 atactatcgaagtagtaaaa-atatcgttcccacaaggactgtttttaatctcaatt 21279613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 12516226 - 12516281
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgt 211  Q
    ||||||||| ||| |||||||||||  ||||| |||||||||||||||||||||||    
T  12516226 caagtgtaccaaaaactatcgaagttgtaaaataatatcgttcccacaaggactgt 12516281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 17931326 - 17931272
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgt 211  Q
    |||||||||| ||| |||||||||||| |||||| ||| |||||||||||||||||    
T  17931326 gcaagtgtaccaaaaactatcgaagtagtaaaaa-tattgttcccacaaggactgt 17931272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 33419997 - 33419944
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||| | |||||||| ||| ||||||||||||    
T  33419997 gcaagtgtaccaaatactatcgaagtagt-aaaaatattgtttccacaaggactg 33419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 37681350 - 37681408
Alignment:
Q  205 ggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    ||||||||||||||||||||||  ||||| || | ||| |||||||| |||||||||||    
T  37681350 ggactgtgttaatctcaatttaacaataaggttactatctaggatgtgtaaattatttt 37681408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 1482582 - 1482488
Alignment:
Q  35 gattactcaaggaataaatttagctctatactatcccacaagatattggtaattatctgtcttccacttattttctctctctttcacaaaataattt 131  Q
    |||||||||| ||| |||||||| |||||  |||||||||||| | |||||||||||  |||   || | ||||||||| |||||||| ||||||||    
T  1482582 gattactcaatgaacaaatttagttctat--tatcccacaagacactggtaattatcgatctcaaacattttttctctccctttcacacaataattt 1482488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 17012810 - 17012870
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  17012810 gcaagtgtaccaataactatcgaagtagtaacaaatatcgtt-ccacaaggactgtattaat 17012870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 17544391 - 17544331
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  17544391 gcaagtgtaccaataactatcgaagtagtaacaaatatcgtt-ccacaaggactgtattaat 17544331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 24435360 - 24435312
Alignment:
Q  168 aatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  24435360 aatactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 24435312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 24445406 - 24445358
Alignment:
Q  168 aatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  24445406 aatactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 24445358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 23612480 - 23612413
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| ||||||  || |||||||||||| || || |||||||||||    
T  23612480 gcaagtgtaccaaatactatcgaagtagtaaaaatcat-gttcccacaagggctggttttaatctcaat 23612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 23619144 - 23619210
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||| ||| ||||||||||| || |||||||||||    
T  23619144 gcaagtgtaccaaatactatcgaagtagt-aaaaatattgtt-ccacaaggactggttttaatctcaat 23619210  T

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Target: chr6 (Bit Score: 109; Significance: 7e-55; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 11187977 - 11188093
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11187977 agcaagtgcactaaatactatcgaagtagtaaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 11188076  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  11188077 aattattttgtttagat 11188093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 30655801 - 30655686
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655801 agcaagtgtactaaatactatcgaagtaataaaaa-tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 30655703  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  30655702 aattattttgtttagat 30655686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 11729112 - 11729225
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 256  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11729112 caagtgtactaaatactatcgaagtaataaaa-atatcgttcccacaaaaactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 11729210  T
Q  257 ttattttgtttagat 271  Q
    |||||||||||||||    
T  11729211 ttattttgtttagat 11729225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 23381950 - 23382052
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23381950 agcaagtgtactaaatactatcgaagtaataaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 23382048  T
Q  255 aatt 258  Q
    ||||    
T  23382049 aatt 23382052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 23384530 - 23384632
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23384530 agcaagtgtactaaatactatcgaagtaataaaa-atatcgttcccacgaggactgtgttaatttcaatttagaaataaagtaaatatttaggatgtata 23384628  T
Q  255 aatt 258  Q
    ||||    
T  23384629 aatt 23384632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 9954306 - 9954199
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  9954306 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 9954208  T
Q  255 aattatttt 263  Q
    |||||||||    
T  9954207 aattatttt 9954199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 3596559 - 3596661
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  3596559 agcaagtttactaaatactatcgaagtagtaaaa-atatcgttcccacaaagactgtgttaatctcaatttagcaataaggtaaatatttaggatgtata 3596657  T
Q  255 aatt 258  Q
    ||||    
T  3596658 aatt 3596661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 11402604 - 11402501
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||| ||    
T  11402604 agcaagtgtactaaatattatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcagtttagcaataaggttaaaatttaggatgtgta 11402505  T
Q  255 aatt 258  Q
    ||||    
T  11402504 aatt 11402501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 23842568 - 23842684
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||| ||||||||| |||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  23842568 gcaagtgtaccaaaaactatcgaaataataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgtata 23842667  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  23842668 aattattttgtttagat 23842684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 26942213 - 26942315
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||||  |||||||||||||||||| |||  ||||||||||||||||||||||||||    
T  26942213 agcaagtgtactaaatactatcgaagtagtaaaaa-tattgttcccacgtggactgtgttaatctcaaattatcaataaagtaaatatttaggatgtata 26942311  T
Q  255 aatt 258  Q
    ||||    
T  26942312 aatt 26942315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 5737844 - 5737949
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 256  Q
    |||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||| ||||| || ||||| |||||||| ||||    
T  5737844 caagtgtactaaatactatcgaagtagtaaaa-atatcgtttccgcaaggactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaa 5737942  T
Q  257 ttatttt 263  Q
    |||||||    
T  5737943 ttatttt 5737949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 1125515 - 1125617
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||| || ||||| |||||||| ||    
T  1125515 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccatgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgta 1125613  T
Q  255 aatt 258  Q
    ||||    
T  1125614 aatt 1125617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 23848126 - 23848010
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||| ||||||||  |||||||| ||  ||||  |||| |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  23848126 gcaagtgtaccaaaaactatcgacataataaaataagttcgtatccacgaggactgtgttaatctcaatttaacactaaagtaaatatttaggatgtata 23848027  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  23848026 aattattttgtttagat 23848010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 2379573 - 2379467
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| |||||  ||||||||||||||||| ||||| || |||||||| ||||| |||    
T  2379573 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggacactgttaatctcaatttagcaataaggttaatatttaagatgtgtaa 2379475  T
Q  256 attatttt 263  Q
    ||||||||    
T  2379474 attatttt 2379467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 23008405 - 23008294
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||||||||||||||||||||| ||||   || |||||  |||  ||||||||||||||||||||| || |||||||| ||||||||||||||     
T  23008405 agcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaataaagttaatatttaggatgtg 23008306  T
Q  253 taaattattttg 264  Q
    ||||||||||||    
T  23008305 taaattattttg 23008294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 23779959 - 23780070
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||||||||||||||||||||| ||||   || |||||  |||  ||||||||||||||||||||| || |||||||| ||||||||||||||     
T  23779959 agcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaataaagttaatatttaggatgtg 23780058  T
Q  253 taaattattttg 264  Q
    ||||||||||||    
T  23780059 taaattattttg 23780070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 17106396 - 17106514
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| | ||| ||||||||||||||||   ||||||||||||||||||||||||    
T  17106396 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaagacagtgttaatctcaatttcacaataaagtaaatatttaggatgta 17106495  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  17106496 taaattattttgtttagat 17106514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 3826601 - 3826704
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||| | ||  ||||  |||||||||||||||||||||||| |||| |||||||| |||||||||||||| |    
T  3826601 agcaagtgtactaaa-actatcgaagtaataagataagttcgtatccacaaggactgtgttaatctcaacttagcaataaagttaatatttaggatgtgt 3826699  T
Q  254 aaatt 258  Q
    |||||    
T  3826700 aaatt 3826704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 10290331 - 10290218
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  | ||  |||| |||||||||||||||||||||||| |||||||| |||||||||||| ||    
T  10290331 agcaagtgtactaaaaatgtatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatata 10290232  T
Q  253 taaattattttgtt 266  Q
    |||||| |||||||    
T  10290231 taaatttttttgtt 10290218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 14966567 - 14966464
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  14966567 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 14966469  T
Q  254 aaatt 258  Q
    |||||    
T  14966468 aaatt 14966464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 34502689 - 34502586
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||| ||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  34502689 agcaagtgtactaaa-actatcgaagtagtaaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 34502591  T
Q  254 aaatt 258  Q
    |||||    
T  34502590 aaatt 34502586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 5260157 - 5260045
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||| ||||||||| ||||||||||||||||||  |||     |||  ||||||||||| ||||||||||||||||| ||||| || ||||| ||||||    
T  5260157 agcaaatgtactaaa-actatcgaagtaataaaatttataagttcgtatccacaaggactatgttaatctcaatttagcaataaggttaatatctaggat 5260059  T
Q  250 gtataaattatttt 263  Q
    || |||||||||||    
T  5260058 gtgtaaattatttt 5260045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 14970047 - 14969944
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||  |||||| |||||||||||| |||| |||||||| ||||| |||||||| |    
T  14970047 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccatgaggactatgttaatctcaacttagcaataaagttaatatctaggatgtgt 14969949  T
Q  254 aaatt 258  Q
    |||||    
T  14969948 aaatt 14969944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 19476348 - 19476281
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||||| | |||||||||||    
T  19476348 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactgattttaatctcaat 19476281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 22560937 - 22561005
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaat 223  Q
    ||||||| || || ||||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  22560937 gcaagtgcaccaattactatcgaagtaataaaataagatcgttcccacaaggactctgttaatctcaat 22561005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 20186021 - 20185983
Alignment:
Q  233 aagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20186021 aagtaaatatttaggatgtataaattattttgtttagat 20185983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 22149970 - 22150008
Alignment:
Q  233 aagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22149970 aagtaaatatttaggatgtataaattattttgtttagat 22150008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 24410643 - 24410578
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaa 222  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||    
T  24410643 caagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaa 24410578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 14281348 - 14281405
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||    
T  14281348 gactgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattatttt 14281405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 9839189 - 9839260
Alignment:
Q  167 aaatactatcgaagtaataaaaa--atatcgttcccacaaggactgtgttaatctcaatttagaaataaagt 236  Q
    |||||||||||||||||||||||  || |||| ||||| |||| |||||||||||||| |||| ||||||||    
T  9839189 aaatactatcgaagtaataaaaataatttcgtacccacgaggattgtgttaatctcaacttagcaataaagt 9839260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 28107530 - 28107640
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||||||||| ||||||||||||||||||  |||     |||  ||||| ||| ||||||||||||||||||| | ||| || ||||| ||||||||    
T  28107530 caagtgtactaaa-actatcgaagtaataaaatttataagttcgtatccacagggattgtgttaatctcaatttagcactaaggttaatatctaggatgt 28107628  T
Q  252 ataaattatttt 263  Q
     |||||||||||    
T  28107629 gtaaattatttt 28107640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 4512823 - 4512770
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||    
T  4512823 gcaagtgtaccgaatactatcgaagtagtaaaaa-tatcgttcccacaaggactg 4512770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 24400519 - 24400458
Alignment:
Q  162 gtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  24400519 gtaccaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 24400458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 2372625 - 2372568
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||||||||||||||||||||| ||||| || ||||| |||||| | |||||||||||    
T  2372625 gactgtgttaatctcaatttagcaataaggttaatatctaggatttgtaaattatttt 2372568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 6514343 - 6514232
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||||||||||  |||     |||  | |||||||||||||||||||||||||   ||||| || ||||| ||||||    
T  6514343 agcaagtgtactaaa-actatcgaagtaataaaatttataagttcgtatctacaaggactgtgttaatctcaattttataataaggt-aatatctaggat 6514246  T
Q  250 gtataaattatttt 263  Q
    || |||||||||||    
T  6514245 gtgtaaattatttt 6514232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 17696916 - 17696864
Alignment:
Q  171 actatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||    
T  17696916 actatcgaagtagtaataaatatcgttcc-acaaggactgtgttaatttcaatt 17696864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 24155143 - 24155211
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||| ||||| | || |||||||||||    
T  24155143 agcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccataaggattggttttaatctcaat 24155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 24371560 - 24371449
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||| | |||||||||||||||||  |  ||||  |||| |||||||||||||||||||||||| || |  || | ||| || ||||| ||    
T  24371560 caagtgtactaaa-attatcgaagtaataaaaataagttcgtatccacgaggactgtgttaatctcaatttagcaaaattgttattatctaagatgtgta 24371462  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  24371461 aattattttgttt 24371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 26896034 - 26896102
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||||| |||||||||| ||||| | |||||||||||||||||| ||||| || |||||||||||    
T  26896034 agcaagtgtaccaaatactatcaaagtagt-aaaaatatcgttcccacagggactggttttaatctcaat 26896102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 28111580 - 28111692
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||||||||||  |||     |||  ||||| ||||||||||||||||||||||| | ||| |  ||||| ||||||    
T  28111580 agcaagtgtactaaa-actatcgaagtaataaaatttataagttcgtatccacatggactgtgttaatctcaatttagcactaaggataatatctaggat 28111678  T
Q  250 gtataaattatttt 263  Q
    |  |||||||||||    
T  28111679 gcgtaaattatttt 28111692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 2331622 - 2331555
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||||||||| ||| |||||||||||| ||| ||||||  |||| ||||||||||| ||||||||||||    
T  2331622 gcaagtgtaccaaaaactatcgaagtagtaataaatattattcc-acaaggactgtattaatctcaatt 2331555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 7128644 - 7128578
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  7128644 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 7128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 262
Target Start/End: Complemental strand, 13005540 - 13005429
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||||||||||  |||     |||  ||||| ||  ||||||||||||||||||| |||||  | ||||| ||||||    
T  13005540 agcaagtgtactaaa-actatcgaagtaataaaatttataagttcgtatccacatgggttgtgttaatctcaatttagcaataagattaatatctaggat 13005442  T
Q  250 gtataaattattt 262  Q
    || ||||||||||    
T  13005441 gtttaaattattt 13005429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 13947359 - 13947293
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  13947359 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactgattttaatctcaat 13947293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 18855804 - 18855870
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  18855804 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 18855870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 28230941 - 28230875
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  28230941 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactgattttaatctcaat 28230875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 32110016 - 32109963
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgt 211  Q
    ||||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||    
T  32110016 caagtgtaccaaaaactatcgaagtagtaaaaa-tatcgtacccacaaggactgt 32109963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 2846605 - 2846540
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 264  Q
    ||||||||| ||||||||||||| | ||| ||||| || | ||| |||||||| ||||||||||||    
T  2846605 ccacaaggattgtgttaatctcagtctagcaataaggttactatctaggatgtgtaaattattttg 2846540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 22920869 - 22920809
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  22920869 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 22920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 31123777 - 31123710
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||| ||||| ||| | |||||||||| ||| |||||| ||||| ||||||||||| ||||||||||||    
T  31123777 gcaaatgtaccaaaaagtatcgaagtagtaataaatattgttcc-acaaggactgtattaatctcaatt 31123710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 3e-54; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 2775921 - 2775807
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2775921 gcaagtgtactaaatactatcgaagtaataaaaa-tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 2775823  T
Q  256 attattttgtttagat 271  Q
    ||||||||||||||||    
T  2775822 attattttgtttagat 2775807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 2779163 - 2779049
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2779163 gcaagtgtactaaatactatcgaagtaataaaaa-tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 2779065  T
Q  256 attattttgtttagat 271  Q
    ||||||||||||||||    
T  2779064 attattttgtttagat 2779049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 25585116 - 25584999
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  25585116 agcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatcttaacttagaaataaagtaaatatttaggatgtat 25585017  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  25585016 aaattattttgtttagat 25584999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 45896822 - 45896703
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaa---tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||| ||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45896822 agcaagtatactaaatactatcgaagtaataaaaaaaaatatcgtccccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 45896723  T
Q  252 ataaattattttgtttagat 271  Q
    ||||||||||||||||||||    
T  45896722 ataaattattttgtttagat 45896703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 49742674 - 49742791
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49742674 agcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcttacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 49742773  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  49742774 aaattattttgtttagat 49742791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 43927277 - 43927162
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43927277 agcaagtgtactaaatactatcaaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 43927179  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  43927178 aattattttgtttagat 43927162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 35412933 - 35412822
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  35412933 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgta 35412835  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  35412834 aattattttgttt 35412822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 16184449 - 16184557
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16184449 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgtttccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 16184547  T
Q  255 aattattttg 264  Q
    || |||||||    
T  16184548 aaatattttg 16184557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 24125927 - 24125825
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24125927 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 24125829  T
Q  255 aatt 258  Q
    ||||    
T  24125828 aatt 24125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 8461260 - 8461371
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  8461260 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcacatgaggaatgtgttaatctcaatttagaaataaagtaaatatttaggatttata 8461358  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  8461359 aattattttgttt 8461371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 7486999 - 7486897
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  7486999 agcaagtgtactaaatactatcgaagtaataaaaa-tatcgttcccacaaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 7486901  T
Q  255 aatt 258  Q
    ||||    
T  7486900 aatt 7486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 24129204 - 24129102
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24129204 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttccctcgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 24129106  T
Q  255 aatt 258  Q
    ||||    
T  24129105 aatt 24129102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 6922948 - 6922837
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||| ||    
T  6922948 agcaagtatactaaatactatcgaagtagtaaaaa-tatcgttcccacgaagactgtgttaatctcaatttagcaataaagttaatatttaggatgtgta 6922850  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  6922849 aattattttgttt 6922837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 539254 - 539147
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  539254 agcaagtatactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 539156  T
Q  255 aattatttt 263  Q
    |||||||||    
T  539155 aattatttt 539147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 2873992 - 2873885
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||| ||||| || |||||||||||||| ||    
T  2873992 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatcttaatttagcaataatgttaatatttaggatgtgta 2873894  T
Q  255 aattatttt 263  Q
    |||||||||    
T  2873893 aattatttt 2873885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 30691163 - 30691056
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  30691163 agcaagtgcactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 30691065  T
Q  255 aattatttt 263  Q
    |||||||||    
T  30691064 aattatttt 30691056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 3840936 - 3840839
Alignment:
Q  174 atcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||| |||||||||||||||||||||||| | ||||| |||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3840936 atcgaaataataaaaaatatcgttcccacaaagtctgtggtaatcgtaatttagaaataaagtaaatatttaggatctataaattattttgtttagat 3840839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 31549622 - 31549509
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||| |||||||||||||||||| ||  ||||  |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31549622 gcaagtgtaccaaaaactatcgaagtaataaaataagttcgtatccacgatgactgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 31549523  T
Q  255 aattattttgttta 268  Q
    ||||||||||||||    
T  31549522 aattattttgttta 31549509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 10106366 - 10106484
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgtt------aatctcaatttagaaataaagtaaatatttagga 248  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||      ||||||||||||| |||  |||||||||||||||    
T  10106366 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatctcaatttagcaatttagtaaatatttagga 10106464  T
Q  249 tgtataaattattttgttta 268  Q
    ||||||||||||||||||||    
T  10106465 tgtataaattattttgttta 10106484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 12541066 - 12541173
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||| |||||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  12541066 agcaagtgtactaaatactattgaagtagtaaaa-atatcgttcccatgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 12541164  T
Q  255 aattatttt 263  Q
    |||||||||    
T  12541165 aattatttt 12541173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 54724169 - 54724062
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||| ||||| |||||||| ||||||||| |||||||| |||||||||||||| ||    
T  54724169 agcaagtgtactaaatattatcgaagtagtaaaaa-tatcgttcccacgaggaccgtgttaatttcaatttagcaataaagttaatatttaggatgtgta 54724071  T
Q  255 aattatttt 263  Q
    |||||||||    
T  54724070 aattatttt 54724062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 6434540 - 6434645
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataa--aaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||  ||||| || |||||||| |||||     
T  6434540 agcaagtgcactaaatactatcgaagtaataataaaaatatcgttcccacgaggactgtgttaatctcaatttaacaataaggttaatatttatgatgtg 6434639  T
Q  253 taaatt 258  Q
    ||||||    
T  6434640 taaatt 6434645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 10902380 - 10902262
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||| ||||||||||| ||  ||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  10902380 agcaagtgtactaaaaatgtatctaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatata 10902281  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  10902280 taaattattttgtttagat 10902262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 263
Target Start/End: Complemental strand, 11190951 - 11190847
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaat 257  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| || ||||| ||||||||||||||| ||||| || |||| ||||||||| |||||    
T  11190951 aagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgagaactgtattaatctcaatttagtaataaggttaatacttaggatgtgtaaat 11190853  T
Q  258 tatttt 263  Q
    ||||||    
T  11190852 tatttt 11190847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 23298379 - 23298482
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |  |||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| |    
T  23298379 agcaagtgtactaaaaatgtatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgtgt 23298477  T
Q  254 aaatt 258  Q
    |||||    
T  23298478 aaatt 23298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 10881901 - 10881802
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  10881901 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaatatttaggatatataaattattttgtttagat 10881802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 16244262 - 16244195
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16244262 aggaccgtgttaatctcaatttagtaataaagtaaatatttaggatgtataaattattttgtttagat 16244195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 28007833 - 28007947
Alignment:
Q  155 agcaagtgtactaaatact-atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||||||||||   |||||||| |||||| ||  ||||  |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  28007833 agcaagtgtactaaatatgcatcgaagtgataaaataagttcgtatccacgaggactatgttaatctcaatttagcaataaagtaaatatttaggatgta 28007932  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  28007933 taaattattttgttt 28007947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 28266332 - 28266244
Alignment:
Q  169 atactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| |||||  |||||||||||||||| ||||||    
T  28266332 atactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataagctaaatatttaggatgtgtaaatt 28266244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 20728450 - 20728513
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  20728450 aggactgtgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttgttt 20728513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 28327793 - 28327687
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||| |||||  | |||||||||||||| |||    
T  28327793 gcaagtgtaccaataactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaa 28327695  T
Q  256 attatttt 263  Q
    ||||||||    
T  28327694 attatttt 28327687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 28331118 - 28331012
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||| |||||  | |||||||||||||| |||    
T  28331118 gcaagtgtaccaataactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaa 28331020  T
Q  256 attatttt 263  Q
    ||||||||    
T  28331019 attatttt 28331012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 53816257 - 53816155
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||| || |||||| ||||||||||||||||  ||||| || |||||||||||||| ||    
T  53816257 agcaagtgtactaaatactatcgtagtagtaaaaa-tatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgta 53816159  T
Q  255 aatt 258  Q
    ||||    
T  53816158 aatt 53816155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 50461317 - 50461402
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatat 242  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||    
T  50461317 gcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatat 50461402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 52309386 - 52309500
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||  ||||||| ||||||||| ||||||||||||||||||||||||    
T  52309386 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggacaatgttaatttcaatttagcaataaagtaaatatttaggatgta 52309485  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  52309486 taaattattttgttt 52309500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 264
Target Start/End: Complemental strand, 52200327 - 52200235
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 264  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||    
T  52200327 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatattaaggatgtataaaatattttg 52200235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 4250735 - 4250633
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||| |||||||||||||||||| | ||   | |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| ||    
T  4250735 agcaagtgtactaaa-actatcgaagtaataaaataaattcgtaccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgta 4250637  T
Q  255 aatt 258  Q
    ||||    
T  4250636 aatt 4250633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 41977390 - 41977323
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||| |||||||    
T  41977390 aggactgtgttaatcttaatttagcaataaaataaatatttaggatatataaattattttatttagat 41977323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 54461381 - 54461327
Alignment:
Q  213 ttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  54461381 ttaatctcaatttagcaataaagtaaatatttaggatgtaaaaattattttgttt 54461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 10885249 - 10885192
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 256  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10885249 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaa 10885192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 18641567 - 18641639
Alignment:
Q  186 aaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||||||    
T  18641567 aaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatt 18641639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 18644563 - 18644635
Alignment:
Q  186 aaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||||||    
T  18644563 aaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatt 18644635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 43809963 - 43809904
Alignment:
Q  205 ggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 264  Q
    ||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||    
T  43809963 ggactgtgttaattttaatttagcaataaagtaaatatttaggatgtataaaatattttg 43809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 2279400 - 2279501
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||| ||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  2279400 caagtatactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 2279498  T
Q  256 att 258  Q
    |||    
T  2279499 att 2279501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 2784456 - 2784355
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| | ||| |||||||| |    
T  2784456 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatgtgt 2784358  T
Q  254 aaa 256  Q
    |||    
T  2784357 aaa 2784355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 3306200 - 3306092
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||  |||||||||||||||||  ||  ||||  |||| |||||||||||||||||||  ||| |||||||| ||||| |||||||| ||    
T  3306200 gcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgtgttaatctcaacctagcaataaagttaatatctaggatgtgta 3306101  T
Q  255 aattatttt 263  Q
    |||||||||    
T  3306100 aattatttt 3306092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 42354181 - 42354284
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| |||||||||| |||||||| |||  |||||||| ||||| |||||||| |    
T  42354181 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgtcaatctcaacttaacaataaagttaatatctaggatgtgt 42354279  T
Q  254 aaatt 258  Q
    |||||    
T  42354280 aaatt 42354284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 46885343 - 46885276
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||    
T  46885343 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactggttttaatctcaat 46885276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 48063804 - 48063871
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||    
T  48063804 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactggttttaatctcaat 48063871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 10960241 - 10960134
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaa--ata---tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    |||||| |||||||| |||||||||||||||||||  |||   ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  10960241 agcaagcgtactaaa-actatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggat 10960143  T
Q  250 gtataaatt 258  Q
    || ||||||    
T  10960142 gtgtaaatt 10960134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 10963748 - 10963641
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaa--ata---tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    |||||| |||||||| |||||||||||||||||||  |||   ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| ||||||    
T  10963748 agcaagcgtactaaa-actatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggat 10963650  T
Q  250 gtataaatt 258  Q
    || ||||||    
T  10963649 gtgtaaatt 10963641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 30157810 - 30157913
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||  |||||||||||||||||  ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| ||    
T  30157810 gcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgta 30157909  T
Q  255 aatt 258  Q
    ||||    
T  30157910 aatt 30157913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 17531423 - 17531488
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||||||||| || |||||||||||    
T  17531423 aagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacaaggactggttttaatctcaat 17531488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 10967251 - 10967150
Alignment:
Q  161 tgtactaaatactatcgaagtaataaaaa--ata---tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||| |||||||||||||||||||  |||   ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  10967251 tgtactaaa-actatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 10967153  T
Q  256 att 258  Q
    |||    
T  10967152 att 10967150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 17528526 - 17528593
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||| ||||| ||||| |||||||||||||||||||| || |||||||||||    
T  17528526 gcaagtgtaccaaatactatcaaagtagtaaaa-atatcgttcccacaaggactggttttaatctcaat 17528593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 18883562 - 18883459
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||| ||||| ||||| ||  ||||   ||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  18883562 agcaagtgtactaaa-actatcaaagtagtaaaataagttcgtattcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 18883464  T
Q  254 aaatt 258  Q
    |||||    
T  18883463 aaatt 18883459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 32287135 - 32287191
Alignment:
Q  207 actgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    ||||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||    
T  32287135 actgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattatttt 32287191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 34983554 - 34983621
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||| || | |||||||||||    
T  34983554 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggattgattttaatctcaat 34983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 54720403 - 54720336
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||| |||||||||| | |||||||||||    
T  54720403 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcctacaaggactgattttaatctcaat 54720336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 47055310 - 47055251
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||| ||||||||||||||||||||||||| || ||||| |||||||| ||||||    
T  47055310 ccacgaggattgtgttaatctcaatttagaaataacgttaatatctaggatgtgtaaatt 47055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 17039782 - 17039851
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgtt-aatctcaat 223  Q
    |||||||||| ||| |||||| ||||| ||||| ||||||||||||||||||||||| || |||||||||    
T  17039782 gcaagtgtaccaaaaactatcaaagtagtaaaataatatcgttcccacaaggactgttttcaatctcaat 17039851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 29233366 - 29233426
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| |||||||||||||| ||||||||||||| |||||    
T  29233366 gcaagtgtaccaataactatcgaagtagtaaaaaatatcgtt-ccacaaggactgtattaat 29233426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 15195109 - 15195176
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||| |||| | || |||||||||||    
T  15195109 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacgaggattggttttaatctcaat 15195176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 22993463 - 22993534
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaa--aaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    ||||||||||||||| |||||||||||||||||  |||  ||||| |||| ||||  |||||||||||||||    
T  22993463 agcaagtgtactaaaaactatcgaagtaataaaataaagttcgtttccacgaggatcgtgttaatctcaatt 22993534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 25486566 - 25486498
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    ||||||||| ||| ||||| |||||| ||||| |||||||||||||||||||||| | |||||||||||    
T  25486566 caagtgtaccaaaaactattgaagtagtaaaataatatcgttcccacaaggactgtttttaatctcaat 25486498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 31857949 - 31857913
Alignment:
Q  209 tgtgttaatctcaatttagaaataaagtaaatattta 245  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31857949 tgtgttaatctcaatttagcaataaagtaaatattta 31857913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 32366896 - 32366962
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  32366896 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 32366962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 54735982 - 54736085
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    |||||||||| |||| | ||||||||| |||||| ||  ||||  |||| |||| |||||||||||||| |||| |||||||| ||||| |||||||| |    
T  54735982 agcaagtgtattaaa-attatcgaagttataaaataagttcgtatccacgaggattgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 54736080  T
Q  254 aaatt 258  Q
    |||||    
T  54736081 aaatt 54736085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 11785204 - 11785151
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||| ||||| |||||| ||||| ||||||||||||||    
T  11785204 gcaagtgtaccaaatactatcaaagtagtaaaaa-tatcgctcccacaaggactg 11785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 5886760 - 5886820
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  5886760 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 5886820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 5896744 - 5896804
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  5896744 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 5896804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 55034705 - 55034774
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatat 242  Q
    ||||||||||||||| ||  ||||  ||||||| ||| ||||||| ||||||||| ||||||||||||||    
T  55034705 atcgaagtaataaaataagttcgtatccacaagaactatgttaatttcaatttagcaataaagtaaatat 55034774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 25442626 - 25442692
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||| || | |||||||||||    
T  25442626 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggattgattttaatctcaat 25442692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 34832118 - 34832001
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34832118 agcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 34832019  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  34832018 aaattattttgtttagat 34832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 41876534 - 41876649
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41876534 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 41876632  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  41876633 aattattttgtttagat 41876649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 22936720 - 22936831
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  22936720 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgta 22936818  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  22936819 aattattttgttt 22936831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 43492099 - 43491988
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  43492099 agcaaatgtactaaatactatcgaagtagtaaaaa-tatcgttcccacaaggaccgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 43492001  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  43492000 aattattttgttt 43491988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 31864058 - 31863956
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31864058 agcaagtgtactaaatactattgaagtagtaaaaa-tatcgttcccacgaggactgagttaatctcaatttagcaataaagtaaatatttaggatgtata 31863960  T
Q  255 aatt 258  Q
    ||||    
T  31863959 aatt 31863956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 41306306 - 41306401
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  41306306 agcaagtgcactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgt 41306401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 40915937 - 40916044
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||   |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  40915937 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcattccctttaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 40916035  T
Q  255 aattatttt 263  Q
    |||||||||    
T  40916036 aattatttt 40916044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 7271373 - 7271259
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  7271373 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgta 7271274  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  7271273 taaattattttgttt 7271259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 30066620 - 30066552
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30066620 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 30066552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 42063274 - 42063172
Alignment:
Q  155 agcaagtgtactaaa--tactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||||||||  ||||||||||||| |||||| |||||||||||| |||||| |||||||||||||| || ||||||||||||||||| ||||||    
T  42063274 agcaagtgtactaaaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactatgttaatctcaattcagcaataaagtaaatatttaagatgta 42063176  T
Q  253 taaa 256  Q
    ||||    
T  42063175 taaa 42063172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 33552457 - 33552358
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||    
T  33552457 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttaacaatagagtaaatatttaggatgtataaattattttgtttagat 33552358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 4099323 - 4099421
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4099323 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatatcaatttagcaataaagtaaatatttaggatatataaattattttgtttagat 4099421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 28787097 - 28787211
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  28787097 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggaccgtgttagtctcaatttagcaataaagtaaatatttaggatgta 28787196  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  28787197 taaattattttgttt 28787211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 26752481 - 26752583
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||| || ||||||||||||||||||||| ||||| || ||||| || ||||| ||    
T  26752481 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgtccccacgagtactgtgttaatctcaatttagcaataacgttaatatctaagatgtgta 26752579  T
Q  255 aatt 258  Q
    ||||    
T  26752580 aatt 26752583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 261
Target Start/End: Complemental strand, 32838222 - 32838116
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |  ||||||||||||||||| ||||||| |||| |||||||||||||||||||||||  ||||| || |||||||||||||| |    
T  32838222 agcaagtgtactaaaaatgtatcgaagtaataaaaa-tatcgtttccacgaggactgtgttaatctcaatttatcaataaggttaatatttaggatgtgt 32838124  T
Q  254 aaattatt 261  Q
    ||||||||    
T  32838123 aaattatt 32838116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 37215383 - 37215286
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||||||     ||||| ||||||||||||||||| ||    
T  37215383 agcaagtgtactaaatactgtcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaat-----aataacgtaaatatttaggatgtgta 37215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 14015920 - 14016021
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||| ||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  14015920 gcaagtgtaccaaatcctatcgaagtagtaaaa-atatcgtttccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 14016018  T
Q  256 att 258  Q
    |||    
T  14016019 att 14016021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 39192632 - 39192567
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  39192632 gactgtattaatctcaatttagcaataaattaaatatttaggatgtataaattattttgtttagat 39192567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 3195429 - 3195326
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  3195429 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 3195331  T
Q  254 aaatt 258  Q
    |||||    
T  3195330 aaatt 3195326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 30764573 - 30764470
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  30764573 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 30764475  T
Q  254 aaatt 258  Q
    |||||    
T  30764474 aaatt 30764470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 21332452 - 21332563
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| |||||||||||||||||| ||| |    
T  21332452 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagaatgaa 21332551  T
Q  253 taaattattttg 264  Q
    |||| |||||||    
T  21332552 taaaatattttg 21332563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 2453630 - 2453527
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  | ||  |||| ||||||||||||||||||| |||| |||||||| |||||||||||| | |    
T  2453630 agcaagtgtactaaa-actatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggatatgt 2453532  T
Q  254 aaatt 258  Q
    |||||    
T  2453531 aaatt 2453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 19686518 - 19686415
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||| ||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  19686518 agcaagtgtactaaa-actatcgaagtagtaaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 19686420  T
Q  254 aaatt 258  Q
    |||||    
T  19686419 aaatt 19686415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 21335517 - 21335581
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  21335517 ccacgaggactgtgttaatttcaatttagcaataaagtaaatatttagaatgtataaaatatttt 21335581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 30761754 - 30761651
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||  |||||||| ||||| |||||||| |    
T  30761754 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttaacaataaagttaatatctaggatgtgt 30761656  T
Q  254 aaatt 258  Q
    |||||    
T  30761655 aaatt 30761651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 34652538 - 34652641
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  | ||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  34652538 agcaagtgtactaaa-actatcgaagtaataaaataagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 34652636  T
Q  254 aaatt 258  Q
    |||||    
T  34652637 aaatt 34652641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 263
Target Start/End: Complemental strand, 10629555 - 10629448
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||| |||||||||||||||||||||| ||  | ||  |||  |||||||||||||||||||||||  |||||| | | |||||||||||| |||    
T  10629555 caagtgtaccaaatactatcgaagtaataaaataagtttgtatccatgaggactgtgttaatctcaatttaacaataaaattattatttaggatgtgtaa 10629456  T
Q  256 attatttt 263  Q
    ||||||||    
T  10629455 attatttt 10629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 26907194 - 26907261
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||    
T  26907194 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactggttttaatctcaat 26907261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 26548428 - 26548327
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| |||||||||||||||| || |||| |||||||| | ||| |||||||| |    
T  26548428 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagtatctaggatgtgt 26548330  T
Q  254 aaa 256  Q
    |||    
T  26548329 aaa 26548327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 26551987 - 26551886
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| |||||||||||||||| || |||| |||||||| | ||| |||||||| |    
T  26551987 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagtatctaggatgtgt 26551889  T
Q  254 aaa 256  Q
    |||    
T  26551888 aaa 26551886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 28562143 - 28562244
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| |  | |||  |||| ||||||||||||||||||| |||| |||||||| | ||| |||||||| |    
T  28562143 agcaagtgtactaaa-actatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatgtgt 28562241  T
Q  254 aaa 256  Q
    |||    
T  28562242 aaa 28562244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 28565711 - 28565812
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| |  | |||  |||| ||||||||||||||||||| |||| |||||||| | ||| |||||||| |    
T  28565711 agcaagtgtactaaa-actatcgaagtaataaaataggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatgtgt 28565809  T
Q  254 aaa 256  Q
    |||    
T  28565810 aaa 28565812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 19689901 - 19689805
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||||||||||| |||||||||||| ||||| ||  ||||  |||| || |||||||||||||||| |||| |||||||| ||||| ||||||||    
T  19689901 agcaagtgtactaaa-actatcgaagtagtaaaataagttcgtatccacgagcactgtgttaatctcaacttagcaataaagttaatatctaggatgt 19689805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 23044487 - 23044420
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||| |||||||| | |||||||||||    
T  23044487 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccataaggactgattttaatctcaat 23044420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 7625402 - 7625343
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  7625402 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 7625343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 20056190 - 20056123
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaa 222  Q
    |||||||||| ||| |||||||||||| ||||| ||||| ||||||||||| ||||| ||||||||||    
T  20056190 gcaagtgtaccaaaaactatcgaagtagtaaaataatattgttcccacaagaactgttttaatctcaa 20056123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 35049762 - 35049815
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||| | |||||||||||||||| ||||||||    
T  35049762 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccataaggactg 35049815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 34132762 - 34132828
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  34132762 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 34132828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 34142993 - 34143059
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  34142993 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 34143059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 18953040 - 18952986
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgt 211  Q
    |||||||| ||| |||||| ||||| ||||| |||||||||||||||||||||||    
T  18953040 aagtgtaccaaaaactatcaaagtagtaaaataatatcgttcccacaaggactgt 18952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 12088301 - 12088235
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||| ||| || |||||||||||    
T  12088301 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaagaactggttttaatctcaat 12088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 17664897 - 17664830
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||| ||||| ||||| |||||||||| |||||| |||||||| ||||||||||| | |||||||||||    
T  17664897 gcaaatgtaccaaatattatcgaagtagtaaaaa-tatcgttctcacaaggactgattttaatctcaat 17664830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 40781808 - 40781694
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40781808 agcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 40781709  T
Q  254 aaattattttgttta 268  Q
    |||||||||||||||    
T  40781708 aaattattttgttta 40781694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 42368480 - 42368595
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42368480 agcaagtgtactaaatactatcgaagtaataaaa-atatcgttcccacaaaaactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 42368578  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  42368579 aattattttgtttagat 42368595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 31585710 - 31585826
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  31585710 agcaagtgtactaaaaacgtatcgaagtaataaaaaatat-gttcccacaagaactgtgttaatctcaatttagaaataaagtaaatatctaggatgtat 31585808  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  31585809 aaattattttgtttagat 31585826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 5106024 - 5105927
Alignment:
Q  173 tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5106024 tatcgaagtaataaaaa-tatcgttctcacaaggactgtgttaatctcaatttagaaataaagtaaatattcaggatgtataaattattttgtttagat 5105927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 43207664 - 43207774
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  43207664 agcaagtgtactaaaaacgtatcgaagtaataaaaaatatcgttcccacaag-------ttaatctcaatttagaaataaagtaaatatttaggatgtat 43207756  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  43207757 aaattattttgtttagat 43207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 45499139 - 45499246
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  45499139 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 45499237  T
Q  255 aattatttt 263  Q
    |||||||||    
T  45499238 aattatttt 45499246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 24238696 - 24238589
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||| ||||||||| ||    
T  24238696 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatacttaggatgtgta 24238598  T
Q  255 aattatttt 263  Q
    |||||||||    
T  24238597 aattatttt 24238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 25871108 - 25871001
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  25871108 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcctacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 25871010  T
Q  255 aattatttt 263  Q
    |||||||||    
T  25871009 aattatttt 25871001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 25874505 - 25874398
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  25874505 agcaagtgtactaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 25874407  T
Q  255 aattatttt 263  Q
    |||||||||    
T  25874406 aattatttt 25874398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 29440819 - 29440712
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  29440819 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgtttccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 29440721  T
Q  255 aattatttt 263  Q
    |||||||||    
T  29440720 aattatttt 29440712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 8888960 - 8888858
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  8888960 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 8888862  T
Q  255 aatt 258  Q
    ||||    
T  8888861 aatt 8888858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 11347675 - 11347777
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  11347675 agcaagtgtactaaatactatcaaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaataattaggatgtata 11347773  T
Q  255 aatt 258  Q
    ||||    
T  11347774 aatt 11347777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 30274549 - 30274651
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  30274549 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccatgaggactgtgttaatctcaatttagcaataacgtaaatatataggatgtata 30274647  T
Q  255 aatt 258  Q
    ||||    
T  30274648 aatt 30274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 43724037 - 43723919
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43724037 agcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgta 43723938  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  43723937 taaattattttgtttagat 43723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 156 - 264
Target Start/End: Complemental strand, 10601176 - 10601069
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  10601176 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcacacgaggactgtgttaatttcaatttagcaataaagtaaatatttaagatgtataa 10601078  T
Q  256 attattttg 264  Q
    | |||||||    
T  10601077 aatattttg 10601069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 25959470 - 25959577
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||| ||||| || || ||||||||||| ||    
T  25959470 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgatgactgtgttaatctcaatttagcaataaggttaacatttaggatgtgta 25959568  T
Q  255 aattatttt 263  Q
    |||||||||    
T  25959569 aattatttt 25959577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 9185206 - 9185312
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  9185206 gcaagtgtaccaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaattcagcaataaagttaatatttaggatgtgtaa 9185304  T
Q  256 attatttt 263  Q
    ||||||||    
T  9185305 attatttt 9185312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 24235424 - 24235317
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||| || ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||| ||||||||| ||    
T  24235424 agcaagtttattaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatacttaggatgtgta 24235326  T
Q  255 aattatttt 263  Q
    |||||||||    
T  24235325 aattatttt 24235317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 9188434 - 9188540
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||| || ||||| || |||||||||||||| |||    
T  9188434 gcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgagtactgtgttaatctcaattcagcaataaggttaatatttaggatgtgtaa 9188532  T
Q  256 attatttt 263  Q
    ||||||||    
T  9188533 attatttt 9188540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 37279458 - 37279564
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| ||||| ||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||| |||    
T  37279458 gcaagtgtaccaataactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaattcagcaataaagttaatatttaggatgtgtaa 37279556  T
Q  256 attatttt 263  Q
    ||||||||    
T  37279557 attatttt 37279564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 33310989 - 33310888
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  33310989 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 33310891  T
Q  256 att 258  Q
    |||    
T  33310890 att 33310888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 6827062 - 6826990
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  6827062 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttgtttagat 6826990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 38015839 - 38015740
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaat 257  Q
    |||||||| |||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||||    
T  38015839 aagtgtaccaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaat 38015741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 40677541 - 40677647
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||| |||||  | |||||||||||||| |||    
T  40677541 gcaagtgtaccaataactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaa 40677639  T
Q  256 attatttt 263  Q
    ||||||||    
T  40677640 attatttt 40677647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 25138705 - 25138819
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| || | ||||||||||||||||||| ||||||||||||| ||||||||||    
T  25138705 agcaagtgtactaaaaatatatcgaagtaataaaataagttcgtatccacgagaaatgtgttaatctcaatttagcaataaagtaaatacttaggatgta 25138804  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  25138805 taaattattttgttt 25138819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 26366231 - 26366137
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  26366231 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaattcggcaataaagtaaatatttaggatgtataaattattttgttt 26366137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 13971725 - 13971793
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  13971725 ccacgaggactttgttaatctcaatttagcaataaagtgaatatttaggatgtataaattattttgttt 13971793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 15470776 - 15470677
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| ||||| || |||||||||||||| |||||||||||||||||||    
T  15470776 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaggttaatatttaggatgtgtaaattattttgtttagat 15470677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 25820641 - 25820731
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  25820641 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggatgtataaaatatttt 25820731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 13137179 - 13137110
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttta 268  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  13137179 ccacgaggactgtcttaatctcaatttagcaataaagtaaatatttagaatatataaattattttgttta 13137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 1503203 - 1503306
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| | || |||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  1503203 agcaagtgtactaaa-actatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 1503301  T
Q  254 aaatt 258  Q
    |||||    
T  1503302 aaatt 1503306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 1506407 - 1506510
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| | || |||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  1506407 agcaagtgtactaaa-actatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 1506505  T
Q  254 aaatt 258  Q
    |||||    
T  1506506 aaatt 1506510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 13518639 - 13518536
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  13518639 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 13518541  T
Q  254 aaatt 258  Q
    |||||    
T  13518540 aaatt 13518536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 3252655 - 3252554
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||| |||||||||||||||||||   | ||| |||| || ||||||||||||||||  ||| |||||||| ||||| |||||||| ||    
T  3252655 agcaagtgtactaaaaactatcgaagtaataaaaa--tttgtttccacgagaactgtgttaatctcaacatagcaataaagttaatatctaggatgtgta 3252558  T
Q  255 aatt 258  Q
    ||||    
T  3252557 aatt 3252554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 11060135 - 11060032
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||| ||||||||| |||||||||||||||||| ||  ||||  |||| || |||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  11060135 agcaaatgtactaaa-actatcgaagtaataaaataagttcgtatccacgagaactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 11060037  T
Q  254 aaatt 258  Q
    |||||    
T  11060036 aaatt 11060032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 16179471 - 16179404
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||| || |||||||||||    
T  16179471 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactggttttaatctcaat 16179404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 5666803 - 5666745
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    ||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  5666803 aggactgcgttgatctcaatttagcaataaagtaa-tatttaggatgtataaattatttt 5666745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 45457490 - 45457384
Alignment:
Q  155 agcaagtgtactaaatact-atcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    |||||||||||||||||   |||||||||||||||  ||  ||||  |||| |||||||||||||||||||||||| ||||| || ||||| ||||||||    
T  45457490 agcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgt 45457391  T
Q  252 ataaatt 258  Q
     ||||||    
T  45457390 gtaaatt 45457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 15719057 - 15719158
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| ||||| |||||||||||| ||  ||||  |||| ||||||||||||||||||| || | |||||||| ||||| |||||||| |||    
T  15719057 caagtgtactaaa-actatggaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttggcaataaagttaatatctaggatgtgtaa 15719155  T
Q  256 att 258  Q
    |||    
T  15719156 att 15719158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 40258918 - 40258971
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  40258918 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggactg 40258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 1386204 - 1386270
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| |  ||||||||||||||||||||||| || |||||||||||    
T  1386204 gcaagtgtaccaaatactatcgaagtagt--aaaatatcgttcccacaaggactggttttaatctcaat 1386270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 15703751 - 15703854
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    |||||||| |||||| |||||||||||||||||| ||  ||||  |||| |||||| ||||||| |||| |||| |||||||| ||||| |||||||| |    
T  15703751 agcaagtgcactaaa-actatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaatatctaggatgtgt 15703849  T
Q  254 aaatt 258  Q
    |||||    
T  15703850 aaatt 15703854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 22631170 - 22631119
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggac 208  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  22631170 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaaggac 22631119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 31427372 - 31427424
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||||||||||||||||||||| ||||| || |||||||||||||| ||||||    
T  31427372 gactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatt 31427424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 12220123 - 12220057
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    ||||||||| |||||||||||||||| | |||||| |||||||||||||||||| | |||||||||||    
T  12220123 caagtgtaccaaatactatcgaagtagt-aaaaatttcgttcccacaaggactgattttaatctcaat 12220057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 23205497 - 23205431
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||| |||||| || |||||||||||    
T  23205497 caagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacgaggactggttttaatctcaat 23205431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 23677101 - 23677035
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||| |||||| || |||||||||||    
T  23677101 caagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacgaggactggttttaatctcaat 23677035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 45454155 - 45454096
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  45454155 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 45454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 9966144 - 9966205
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaa 216  Q
    ||||||| || || ||||||||||||||||||| || |||||||||||||||||| ||||||    
T  9966144 gcaagtgcaccaattactatcgaagtaataaaataagatcgttcccacaaggactatgttaa 9966205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 3875615 - 3875564
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggac 208  Q
    |||||||||  |||||||||||||||| |||||| ||||||||||||||||||    
T  3875615 gcaagtgtatcaaatactatcgaagtagtaaaaa-tatcgttcccacaaggac 3875564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Original strand, 36808239 - 36808326
Alignment:
Q  173 tatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||||  ||  ||||  |||| |||||||| ||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  36808239 tatcgaagtaataaaattaagttcgtatccacgaggactgtattaatctcaatttagcaataaggttaatatctaggatgtgtaaatt 36808326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 27267120 - 27267069
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact 209  Q
    |||||||| ||| |||||||||||  |||| |||||||||||||||||||||    
T  27267120 aagtgtacaaaaaactatcgaagtggtaaataatatcgttcccacaaggact 27267069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 37936999 - 37937052
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||    
T  37936999 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcattcccacaagaactg 37937052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 18939234 - 18939174
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  18939234 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 18939174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 16790537 - 16790603
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||| | ||||||||||| || |||||||||||    
T  16790537 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgct-ccacaaggactggttttaatctcaat 16790603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 34682978 - 34682914
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||| |||||| || |||||||||||||| ||||  || ||||| ||||||| ||||||||||||    
T  34682978 ccacgaggactatggtaatctcaatttagcaatagtgttaatatctaggatgaataaattatttt 34682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 45941772 - 45941655
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45941772 agcaagtgtactaaaaatgtatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 45941673  T
Q  254 aaattattttgtttagat 271  Q
    ||||||||||||||||||    
T  45941672 aaattattttgtttagat 45941655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 6070738 - 6070849
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||||   |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6070738 agcaagtgtaataaaacgtatcgaagtaataaaaac-atcgttcccacaaggattgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 6070836  T
Q  255 aattattttgttt 267  Q
    |||||||||||||    
T  6070837 aattattttgttt 6070849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 1950226 - 1950326
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  1950226 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtata 1950324  T
Q  255 aa 256  Q
    ||    
T  1950325 aa 1950326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 2794571 - 2794464
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  2794571 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 2794473  T
Q  255 aattatttt 263  Q
    |||||||||    
T  2794472 aattatttt 2794464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 28111400 - 28111293
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  28111400 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 28111302  T
Q  255 aattatttt 263  Q
    |||||||||    
T  28111301 aattatttt 28111293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 23021700 - 23021802
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||  |||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  23021700 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccatgaggactctgttaatctcaatttagcaatcaagtaaatatttaggatgtata 23021798  T
Q  255 aatt 258  Q
    ||||    
T  23021799 aatt 23021802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 2405866 - 2405748
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2405866 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgta 2405767  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  2405766 taaattattttgtttagat 2405748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 20448176 - 20448093
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaa 239  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20448176 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactgtgttaatctcaatttagcaataaagtaaa 20448093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 20533943 - 20533860
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaa 239  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20533943 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactgtgttaatctcaatttagcaataaagtaaa 20533860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 27536311 - 27536413
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  27536311 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcacacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 27536409  T
Q  255 aatt 258  Q
    ||||    
T  27536410 aatt 27536413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 49498281 - 49498383
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||| ||    
T  49498281 agcaagcgtactaaatactgtcgaagtagtaaaa-atatcgttcccacgaggattgtgttaatctcaatttagcaataaggtaaatatttaggatgtgta 49498379  T
Q  255 aatt 258  Q
    ||||    
T  49498380 aatt 49498383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 21110945 - 21111043
Alignment:
Q  174 atcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||||||||||| || | |||  |||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21110945 atcgaagtaataaaatatgttcgtatccacgaggactgtgttactctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 21111043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 45960526 - 45960627
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  45960526 gcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 45960624  T
Q  256 att 258  Q
    |||    
T  45960625 att 45960627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 41058115 - 41058187
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  41058115 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatatataaattattttgtttagat 41058187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 3796608 - 3796714
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||| || |||||  | |||||||||||||| |||    
T  3796608 gcaagtgtaccaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaattcagcaataagtttaatatttaggatgtgtaa 3796706  T
Q  256 attatttt 263  Q
    ||||||||    
T  3796707 attatttt 3796714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 258
Target Start/End: Complemental strand, 20399191 - 20399095
Alignment:
Q  161 tgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||| |||||| |||||| |||||||||||| || ||||||||||||||||||||| |||||||| ||||| |||||||| ||||||    
T  20399191 tgtactaaatactatggaagtagtaaaaa-tatcgttcccacgagaactgtgttaatctcaatttagcaataaagttaatatctaggatgtgtaaatt 20399095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 42022939 - 42022871
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  42022939 ccacgaggactgtgttaatctcaatttaacaataaagtaaatatttaggatgtataaattattttgttt 42022871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 267
Target Start/End: Original strand, 49852956 - 49853019
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  49852956 aggattgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 49853019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 31205180 - 31205104
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataa 233  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  31205180 gcaagtgtaccaaatactattgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataa 31205104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 21018254 - 21018349
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttta 268  Q
    ||||||||||||||| ||  ||||  |||| ||||||||||||| |||||||||  |||||||||||||||||| || ||||||||||||||||||    
T  21018254 atcgaagtaataaaataagttcgtatccacgaggactgtgttaacctcaatttaacaataaagtaaatatttagaatatataaattattttgttta 21018349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 23441053 - 23441159
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| ||||| |||||||||||||  ||||||||||||| ||||||| | |||||  | |||||||||||||| |||    
T  23441053 gcaagtgtaccaataactatcgaagtagtaaaa-atatcgttcccacggggactgtgttaatttcaatttggcaataagattaatatttaggatgtgtaa 23441151  T
Q  256 attatttt 263  Q
    ||||||||    
T  23441152 attatttt 23441159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 37183645 - 37183746
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| | |||||||||||||| |||||| |||  || |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  37183645 gcaagtgtaccatatactatcgaagtagtaaaaa-tattatttccacgaggactgtgttaatctcaatttagcaataatgttaatatctaggatgtgtaa 37183743  T
Q  256 att 258  Q
    |||    
T  37183744 att 37183746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 33898659 - 33898567
Alignment:
Q  171 actatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaag-taaatatttaggatgtataaattatttt 263  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| ||||| || | | ||||| | | |||||||||||| |||||||||||    
T  33898659 actatcgaagtagtaaaaa-tatcgttcccacaaggactgtgttaacctcaacttggcagtaaagtttattatttaggatgtgtaaattatttt 33898567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 905463 - 905514
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||  |||||||||||||||| ||||| |||||||||||||||||||||    
T  905463 aagtgtatcaaatactatcgaagtagtaaaa-atatcgttcccacaaggactg 905514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 17902566 - 17902633
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| ||||| ||||||    
T  17902566 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaatttcaatt 17902633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 29643044 - 29643108
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||| |||||||||||||||||||||||| |||||||| | | | || ||||| |||||||||||    
T  29643044 ccacgaggactgtgttaatctcaatttagcaataaagttattttctaagatgtgtaaattatttt 29643108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 50196728 - 50196831
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgt-gttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||| ||||| |||||||||| |||  | ||  |||| ||||| || ||||||||||| |||| |||||||| ||||| |||||||| ||    
T  50196728 gcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaataaagttaatatctaggatgtgta 50196827  T
Q  255 aatt 258  Q
    ||||    
T  50196828 aatt 50196831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 16838712 - 16838772
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  16838712 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 16838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 16848642 - 16848702
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  16848642 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 16848702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 34732190 - 34732247
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||||||||||||||||||||  ||||| |  ||||| |||||||| |||||||||||    
T  34732190 gactgtgttaatctcaatttaacaataaggctaatatataggatgtgtaaattatttt 34732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 5558389 - 5558274
Alignment:
Q  15 ctaaacatgctgcatacttagattactcaaggaataaatttagctctatactatcccacaagatattggtaattatctgtcttccacttattttctctct 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5558389 ctaaacatgctgcatatttagattactcaaggaataaatttagctcta--ctatcccacaagatattggtaattatttgtcttccacttattttctctct 5558292  T
Q  115 ctttcacaaaataattta 132  Q
    ||||||||||||||||||    
T  5558291 ctttcacaaaataattta 5558274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 40902853 - 40902968
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40902853 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagtaataaagtaaatatttaggatgtata 40902951  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  40902952 aattattttgtttagat 40902968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 38283260 - 38283374
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283260 gcaagtgtaccaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 38283358  T
Q  256 attattttgtttagat 271  Q
    ||||||||||||||||    
T  38283359 attattttgtttagat 38283374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 48415292 - 48415410
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||||||||||| || ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  48415292 agcaagtgtactaaaaacatatcgaagtaataaaaaaaatatcgttctcacaaggactgtgttaatctcaatttagaaat-aagtaaatatttaggatgt 48415390  T
Q  252 ataaattattttgtttagat 271  Q
    ||||||||||||||||||||    
T  48415391 ataaattattttgtttagat 48415410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 12238601 - 12238489
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  12238601 agcaagtgtactaaataccatcgaagtagtaaaaa-tatcgttcccacgatgactgtattaatctcaatttagcaataaagtaaatatttaggatgtata 12238503  T
Q  255 aattattttgttta 268  Q
    ||||||||||||||    
T  12238502 aattattttgttta 12238489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 27676825 - 27676937
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27676825 agcaagtgtactaaatattatcgaagtagtaaaa-atatcgttcctacgaaaactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 27676923  T
Q  255 aattattttgttta 268  Q
    ||||||||||||||    
T  27676924 aattattttgttta 27676937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 27014604 - 27014497
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||| ||||||||| ||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27014604 agcaagtgcactaaataccatcgaagtagtaaaaa-tatcgttaccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 27014506  T
Q  255 aattatttt 263  Q
    |||||||||    
T  27014505 aattatttt 27014497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 5673237 - 5673130
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  5673237 agcaagtgtactaaatattatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 5673139  T
Q  255 aattatttt 263  Q
    |||||||||    
T  5673138 aattatttt 5673130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 34319697 - 34319799
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  34319697 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 34319795  T
Q  255 aatt 258  Q
    ||||    
T  34319796 aatt 34319799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 44808735 - 44808837
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  44808735 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 44808833  T
Q  255 aatt 258  Q
    ||||    
T  44808834 aatt 44808837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 48637849 - 48637747
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||| |    
T  48637849 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatcccaatttagcaataaggtaaatatttaggatgtaaa 48637751  T
Q  255 aatt 258  Q
    ||||    
T  48637750 aatt 48637747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 5670915 - 5670812
Alignment:
Q  159 agtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||||||    
T  5670915 agtgtactaaatattatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgtaaatt 5670817  T
Q  259 atttt 263  Q
    |||||    
T  5670816 atttt 5670812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 3720686 - 3720587
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3720686 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 3720587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 18911848 - 18911746
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||| ||||||  |||||||||||||| |||    
T  18911848 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgtttccacgaggactgtgttaatctcaatttagcaataaaaaaaatatttaggatgaata 18911750  T
Q  255 aatt 258  Q
    ||||    
T  18911749 aatt 18911746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 12786467 - 12786349
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  12786467 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatgta 12786368  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  12786367 taaattattttgtttagat 12786349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 19821059 - 19820941
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  19821059 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgta 19820960  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  19820959 taaattattttgtttagat 19820941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 15432423 - 15432316
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||| ||||| |||||||||  |||||| |||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  15432423 agcaagtgtacaaaatattatcgaagttgtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 15432325  T
Q  255 aattatttt 263  Q
    |||||||||    
T  15432324 aattatttt 15432316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 34017563 - 34017670
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||| | || ||||||||||||||||||||| ||||| || |||||||||||||| ||    
T  34017563 agcaagtgtattaaatactatcgaagtagtaaaa-atatcgttcccgcgagcactgtgttaatctcaatttagcaataaggttaatatttaggatgtgta 34017661  T
Q  255 aattatttt 263  Q
    |||||||||    
T  34017662 aattatttt 34017670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 15445132 - 15445250
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||||||||||||||||||||| ||||||  |  ||||  |||| |||||||  ||||||||||||||| |||||||||||||||||| |||||    
T  15445132 agcaagtgtactaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttagcaataaagtaaatatttagaatgta 15445231  T
Q  253 taaattattttgtttagat 271  Q
     ||||||||||||||||||    
T  15445232 caaattattttgtttagat 15445250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 19827766 - 19827648
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  | |||||||||||||| ||  ||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  19827766 agcaagtgtactaaaaatgtctcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgta 19827667  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  19827666 taaattattttgtttagat 19827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 29325164 - 29325063
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  29325164 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 29325066  T
Q  256 att 258  Q
    |||    
T  29325065 att 29325063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 40616587 - 40616688
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||||| |||    
T  40616587 gcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttgatatttaggatgtgtaa 40616685  T
Q  256 att 258  Q
    |||    
T  40616686 att 40616688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 40795304 - 40795239
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40795304 gactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 40795239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 3797638 - 3797706
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3797638 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 3797706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 24043956 - 24044020
Alignment:
Q  203 aaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24043956 aaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 24044020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 15429623 - 15429741
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||| ||| ||||||||||||||||| ||||||  |  ||||  |||| |||||||  ||||||||||||||  ||||||||||||||||||||||||    
T  15429623 agcaagcgtattaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaatatttaggatgta 15429722  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  15429723 taaattattttgtttagat 15429741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 15436237 - 15436355
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||| ||| ||||||||||||||||| ||||||  |  ||||  |||| |||||||  ||||||||||||||  ||||||||||||||||||||||||    
T  15436237 agcaagcgtattaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaatttatcaataaagtaaatatttaggatgta 15436336  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  15436337 taaattattttgtttagat 15436355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 24151015 - 24150914
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  24151015 gcaagtgtaccaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 24150917  T
Q  256 att 258  Q
    |||    
T  24150916 att 24150914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 35510336 - 35510222
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||| ||||||||||| | || |||  |||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  35510336 agcaagtgtactaaaaatgtatccaagtaataaaataaattcgtatccacgaggactgtgttaatctcaatttagcaataaagtgaatatttaggatgta 35510237  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  35510236 taaattattttgttt 35510222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 52006344 - 52006416
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  52006344 ccacgaggactgtgttaatctcaatttagcgataaagtaaatatttaggatatataaattattttgtttagat 52006416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 52530713 - 52530815
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||| |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||    
T  52530713 agcaagcgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaagatgtgta 52530811  T
Q  255 aatt 258  Q
    ||||    
T  52530812 aatt 52530815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 33408154 - 33408212
Alignment:
Q  209 tgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33408154 tgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 33408212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 10386281 - 10386178
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| |||||||||||||| |    
T  10386281 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggatgtgt 10386183  T
Q  254 aaatt 258  Q
    |||||    
T  10386182 aaatt 10386178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 44165086 - 44165019
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  44165086 aggactgatttaatctcaatttagtaataaagtaaatatttatgatgtataaattattttgtttagat 44165019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 52005589 - 52005649
Alignment:
Q  211 tgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  52005589 tgttaatttcaatttagcaataaagtaaatatttaagatgtataaattattttgtttagat 52005649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 33927316 - 33927212
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| ||||||||||||||||||  ||  ||||  |||| |||||||||||||||||||||||| ||||| || ||||| ||||||||     
T  33927316 agcaagtgtactaaa-actatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtg 33927218  T
Q  253 taaatt 258  Q
    ||||||    
T  33927217 taaatt 33927212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 37103031 - 37103088
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaa 256  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  37103031 ccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgtataaa 37103088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 5706706 - 5706634
Alignment:
Q  186 aaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||||||    
T  5706706 aaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatctaagatgtgtaaatt 5706634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 10248163 - 10248060
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| |||||||||||||||||||  ||| |||||||| ||||| |||||||| |    
T  10248163 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaaactagcaataaagttaatatctaggatgtgt 10248065  T
Q  254 aaatt 258  Q
    |||||    
T  10248064 aaatt 10248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 11702357 - 11702460
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| | ||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  11702357 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 11702455  T
Q  254 aaatt 258  Q
    |||||    
T  11702456 aaatt 11702460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 17670649 - 17670546
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| |||||| |||||||||||| |||| |||||||| ||||| |||||||| |    
T  17670649 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactatgttaatctcaacttagcaataaagttaatatctaggatgtgt 17670551  T
Q  254 aaatt 258  Q
    |||||    
T  17670550 aaatt 17670546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 18860115 - 18860012
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| | |||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  18860115 agcaagtgtactaaaaa-tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 18860017  T
Q  254 aaatt 258  Q
    |||||    
T  18860016 aaatt 18860012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 267
Target Start/End: Complemental strand, 49270977 - 49270921
Alignment:
Q  211 tgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  49270977 tgttaatctcaatttagcaataaagtgaatatttatgatgtataaattattttgttt 49270921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 5848854 - 5848928
Alignment:
Q  66 tatcccacaagatattggtaattatctgtcttccacttattttctctctctttcacaaaataatttataaggaag 140  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||| ||||||||| | |||| |||| |||||||    
T  5848854 tatcccacatgatattggtaattatctgtcttccacaaattttctatctctttcaaataatagtttacaaggaag 5848928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 5681725 - 5681661
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||||| ||||||||||    | |||||||||||||||||||||||||||||||||||||||    
T  5681725 ccacgaggactgtattaatctcaa----gcaataaagtaaatatttaggatgtataaattattttgttt 5681661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 1388212 - 1388143
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaat 223  Q
    |||||||| || ||||| |||||||||||||||| || |||||| | |||||||||||||||||||||||    
T  1388212 agcaagtgcaccaaatattatcgaagtaataaaataagatcgtttcaacaaggactgtgttaatctcaat 1388143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 30392914 - 30392847
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||| ||||| |||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  30392914 gcaattgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 30392847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 53094808 - 53094744
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    ||||| ||||||||||||||||||||||| ||||  || ||||| |||||||| |||||||||||    
T  53094808 ccacagggactgtgttaatctcaatttagcaatatggttaatatataggatgtgtaaattatttt 53094744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 11196014 - 11195948
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||| |||||||||||||||| | |||||||||||||||| ||||||| || |||||||||||    
T  11196014 caagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccataaggactggttttaatctcaat 11195948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 15404858 - 15404964
Alignment:
Q  155 agcaagtgtactaaatact-atcgaagtaataaaa--aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    |||||||||||||||||   |||||||||||||||  ||  ||||  |||| | |||||||||||||||||||||| ||||| || ||||| ||||||||    
T  15404858 agcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgacgactgtgttaatctcaatttagcaataacgttaatatctaggatgt 15404957  T
Q  252 ataaatt 258  Q
     ||||||    
T  15404958 gtaaatt 15404964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 25962401 - 25962351
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaagga 207  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  25962401 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaagga 25962351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 53009336 - 53009402
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||| ||||||||||||| || ||||| |||||||||||||||||||| || |||||||||||    
T  53009336 caagtgtaccaaatactatcgaattagtaaaa-atatcgttcccacaaggactggttttaatctcaat 53009402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 56199152 - 56199093
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  56199152 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 56199093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 19859332 - 19859390
Alignment:
Q  205 ggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||||| |||||||||||||||| ||||| || ||||| |||||||| |||||||||||    
T  19859332 ggactgagttaatctcaatttagcaataaggttaatatctaggatgtgtaaattatttt 19859390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 19864225 - 19864283
Alignment:
Q  205 ggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||| |||||||||||||||||| ||||| || ||||| |||||||| |||||||||||    
T  19864225 ggaccgtgttaatctcaatttagcaataaggttaatatctaggatgtgtaaattatttt 19864283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 29544650 - 29544703
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||    
T  29544650 gcaagtgtaccaaatactatcgaagtaat-aaaaatattgttcccataaggactg 29544703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 3748322 - 3748269
Alignment:
Q  66 tatcccacaagatattggtaattatctgtcttccacttattttctctctctttc 119  Q
    ||||||| |||||||||||||||| || |||||||| |||||||||||| ||||    
T  3748322 tatcccagaagatattggtaattacctatcttccacatattttctctctttttc 3748269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 5857473 - 5857400
Alignment:
Q  66 tatcccacaagatattggtaattatctgtcttccacttattttctctctctttcacaaaataatttataaggaa 139  Q
    |||| ||||||||||||| ||||| |||||||||||  | ||||| ||||||||| | ||||||||| ||||||    
T  5857473 tatctcacaagatattggcaattacctgtcttccacaaagtttctatctctttcaaataataatttacaaggaa 5857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 26060848 - 26060744
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||||||||||| |  |||||||||||||||||  |  ||||  |||| |||||| |||||||||||| |||| ||||| || ||||||||| ||||    
T  26060848 agcaagtgtactaaaaatgtatcgaagtaataaaaataagttcgtatccacgaggactatgttaatctcaagttagcaataaggttaatatttagaatgt 26060749  T
Q  252 ataaa 256  Q
    |||||    
T  26060748 ataaa 26060744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 15811959 - 15812018
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| ||||| || ||||||    
T  15811959 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggaagtgtaaatt 15812018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 56195820 - 56195766
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| ||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  56195820 aggattgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 56195766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 3719274 - 3719334
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  3719274 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 3719334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 3734653 - 3734593
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  3734653 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 3734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 11561157 - 11561089
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaattt 225  Q
    |||||||||| ||| |||||||||||| ||| ||||||| ||   ||||||||||| |||||||||||||    
T  11561157 gcaagtgtacaaaaaactatcgaagtagtaataaatatcatt-ttacaaggactgtattaatctcaattt 11561089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 49636317 - 49636369
Alignment:
Q  171 actatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||||||||||| ||| |||||||||| ||||||||||||| ||||| ||||||    
T  49636317 actatcgaagtagtaataaatatcgtt-ccacaaggactgtattaatttcaatt 49636369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 49639595 - 49639655
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  49639595 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 49639655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 18672861 - 18672927
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||| | || |||||||||||    
T  18672861 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggattggttttaatctcaat 18672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 21420131 - 21420064
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||  |||||||||||||||| | |||||||||||| ||||||||| | || |||||||||||    
T  21420131 gcaagtgtatcaaatactatcgaagtagt-aaaaatatcgtttccacaaggattggttttaatctcaat 21420064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 40493146 - 40493213
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||| |||| ||||| | |||||||||||    
T  40493146 gcaagtgtaccaaatactattgaagtagtaaaa-atatcgttcctacaatgactgattttaatctcaat 40493213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 46955257 - 46955323
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| ||| | |||||||||| ||||| ||||||||||||||||||||| | |||||||||||    
T  46955257 gcaagtgtaccaaa-agtatcgaagtagtaaaa-atatcgttcccacaaggactgattttaatctcaat 46955323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 4543136 - 4543021
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4543136 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtata 4543038  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  4543037 aattattttgtttagat 4543021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 8277325 - 8277211
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8277325 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttaccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 8277227  T
Q  256 attattttgtttagat 271  Q
    ||||||||||||||||    
T  8277226 attattttgtttagat 8277211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 4547208 - 4547093
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  4547208 agcaagtgtactaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcagtttagcaataaagtaaatatttaggatgtata 4547110  T
Q  255 aattattttgtttagat 271  Q
    |||||||||||||||||    
T  4547109 aattattttgtttagat 4547093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 11919636 - 11919754
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaa--tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||| |||||||||||||||||||| |||||||  ||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11919636 agcaagtctactaaatactatcgaagtagtaaaaaaaatatagttcccacgaggactgtattaatctcaatttagaaataaagtaaatatttaggatgta 11919735  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  11919736 taaattattttgtttagat 11919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 37415206 - 37415308
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  37415206 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatttagcaataaggtaaatatttaggatgtata 37415304  T
Q  255 aatt 258  Q
    ||||    
T  37415305 aatt 37415308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 155 - 267
Target Start/End: Original strand, 13449564 - 13449675
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||||    
T  13449564 agcaagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccacgaggactatgttaatctcaatttagcagtaaagtaaatatttaggatgtata 13449662  T
Q  255 aattattttgttt 267  Q
    ||| |||||||||    
T  13449663 aataattttgttt 13449675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 26557841 - 26557723
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| || |||||||||||||||| ||  || |  |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26557841 agcaagtgtactaaaaacgtatcgaagtaataaaataagttcatatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgta 26557742  T
Q  253 taaattattttgtttagat 271  Q
    |||||||||||||||||||    
T  26557741 taaattattttgtttagat 26557723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 23224688 - 23224790
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  23224688 agcaagtgtactaaatactatcgaagtagtaaaaa-tatcgctcccacgaggactgtgttaatttcaatttagcaataaggtaaataattaggatgtata 23224786  T
Q  255 aatt 258  Q
    ||||    
T  23224787 aatt 23224790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 4595832 - 4595899
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4595832 aggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 4595899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 35961423 - 35961328
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35961423 tatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 35961328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 6603786 - 6603685
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| || ||||| |||||||| |||    
T  6603786 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaa 6603688  T
Q  256 att 258  Q
    |||    
T  6603687 att 6603685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 267
Target Start/End: Complemental strand, 10345518 - 10345404
Alignment:
Q  155 agcaagtgtactaaatac-tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |  |||||||||||||||| ||  ||||  |||| |||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  10345518 agcaagtgtactaaaaatgtatcgaagtaataaaataagttcgtatccacgaggattgtgttaatctcaatttagcaataaagtaaatatttaggatgta 10345419  T
Q  253 taaattattttgttt 267  Q
    |||||||||||||||    
T  10345418 taaattattttgttt 10345404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 16166077 - 16165976
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||| || ||||| |||||||| |||    
T  16166077 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacaaggactgtgttaatctcaatttatcaataacgttaatatctaggatgtgtaa 16165979  T
Q  256 att 258  Q
    |||    
T  16165978 att 16165976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 2441085 - 2441157
Alignment:
Q  186 aaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2441085 aaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataaaataaatatttaggatgtataaatt 2441157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 4695777 - 4695705
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4695777 ccacgaggactgtgttaatctaaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 4695705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 45286852 - 45286954
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| || |||||| ||||||||||||||||  ||||| || |||||||||||||| ||    
T  45286852 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgta 45286950  T
Q  255 aatt 258  Q
    ||||    
T  45286951 aatt 45286954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 9864566 - 9864625
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattatttt 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9864566 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtgtaaattatttt 9864625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 22611556 - 22611623
Alignment:
Q  204 aggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22611556 aggactttgttaatctcaatttagcaatatagtaaatatttaggatgtataaattattttgtttagat 22611623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 44017561 - 44017667
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    |||||||||| ||  |||||||||||| ||||| ||||||||||||| |||||||||||||| ||||||||| |||||  | |||||||||||||| |||    
T  44017561 gcaagtgtaccaataactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatttcaatttagcaataagattaatatttaggatgtgtaa 44017659  T
Q  256 attatttt 263  Q
    ||||||||    
T  44017660 attatttt 44017667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 45290263 - 45290365
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| || |||||| ||||||||||||||||  ||||| || |||||||||||||| ||    
T  45290263 agcaagtgtactaaatactatcgtagtagtaaaa-atatcgttccaacgaggactatgttaatctcaatttaacaataaggttaatatttaggatgtgta 45290361  T
Q  255 aatt 258  Q
    ||||    
T  45290362 aatt 45290365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 48645789 - 48645698
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 264  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  48645789 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggatgtataaaatattttg 48645698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 8398167 - 8398064
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  8398167 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 8398069  T
Q  254 aaatt 258  Q
    |||||    
T  8398068 aaatt 8398064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 11825137 - 11825240
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  11825137 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 11825235  T
Q  254 aaatt 258  Q
    |||||    
T  11825236 aaatt 11825240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 26153501 - 26153398
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  26153501 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatataggatgtgt 26153403  T
Q  254 aaatt 258  Q
    |||||    
T  26153402 aaatt 26153398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 17731142 - 17731060
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||||| ||  ||||  ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  17731142 atcgaagtaataaaataagttcgtatccacaaggactgtgttaatctcagtttagcaataaagtgaatatttaggatgtataa 17731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 5826490 - 5826593
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  || |  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  5826490 agcaagtgtactaaa-actatcgaagtaataaaataagttcttatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 5826588  T
Q  254 aaatt 258  Q
    |||||    
T  5826589 aaatt 5826593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 22232408 - 22232511
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| ||||| || ||||| |||||||| |    
T  22232408 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaggttaatatctaggatgtgt 22232506  T
Q  254 aaatt 258  Q
    |||||    
T  22232507 aaatt 22232511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 22254331 - 22254228
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| ||||| || ||||| |||||||| |    
T  22254331 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaggttaatatctaggatgtgt 22254233  T
Q  254 aaatt 258  Q
    |||||    
T  22254232 aaatt 22254228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 5796882 - 5796778
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |||||||||||||||||||  |  ||||  |||| | ||||||||||||||||| |||| |||||||| ||||| ||||||||     
T  5796882 agcaagtgtactaaa-actatcgaagtaataaaaataagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtg 5796784  T
Q  253 taaatt 258  Q
    ||||||    
T  5796783 taaatt 5796778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 8258233 - 8258132
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| |||||||||||||||||| ||  ||||  | || ||||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  8258233 caagtgtactaaa-actatcgaagtaataaaataagttcgtatctacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 8258135  T
Q  256 att 258  Q
    |||    
T  8258134 att 8258132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 5241989 - 5242054
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttg 264  Q
    ||||| ||||||||||||||||||||||| ||||| || | ||| |||||||| ||||||||||||    
T  5241989 ccacagggactgtgttaatctcaatttagcaataaggttactatctaggatgtgtaaattattttg 5242054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 14683223 - 14683290
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||| | |||||||||||    
T  14683223 gcaagtgtaccaaataccatcgaagtactaaaa-atatcgttcccacaaggactgattttaatctcaat 14683290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 20080499 - 20080566
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||| ||||| | |||||||||||    
T  20080499 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgttcccacaatgactgattttaatctcaat 20080566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 11397879 - 11397938
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  11397879 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 11397938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 9132544 - 9132596
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact 209  Q
    |||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||    
T  9132544 gcaagtgtaccaaatactatcaaagtagtaaaa-atatcgttcccacaaggact 9132596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 10469466 - 10469410
Alignment:
Q  167 aaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  10469466 aaatactatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 10469410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 13842971 - 13842904
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    ||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  13842971 agcaagtgtaccaaa-actatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 13842904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 20100984 - 20100917
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatt 224  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| ||||| ||||||    
T  20100984 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaatttcaatt 20100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 22257580 - 22257492
Alignment:
Q  171 actatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||||||||||||||||| || |||||  |||| ||||||||||||||||||| |||  ||||| || ||||| || ||||| ||||||    
T  22257580 actatcgaagtaataaaataagatcgtatccacgaggactgtgttaatctcaacttaacaataaggttaatatctaagatgtgtaaatt 22257492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 26135912 - 26135978
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  26135912 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 26135978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 3067759 - 3067825
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaagga-ctgtgttaatctcaat 223  Q
    ||||| ||| |||||||||||||||| ||||| ||||||||||||||||||  ||| |||||||||||    
T  3067759 caagtataccaaatactatcgaagtagtaaaa-atatcgttcccacaaggatttgttttaatctcaat 3067825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 13907628 - 13907670
Alignment:
Q  200 cacaaggactgtgttaatctcaatttagaaataaagtaaatat 242  Q
    |||||||||||||||||||||||||||| ||||| || |||||    
T  13907628 cacaaggactgtgttaatctcaatttagcaataaggttaatat 13907670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 37165930 - 37165983
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg 210  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||| ||||||||    
T  37165930 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtttccataaggactg 37165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 2252211 - 2252151
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  2252211 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 2252151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 23598541 - 23598601
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  23598541 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 23598601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 26460805 - 26460745
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  26460805 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 26460745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 293361 - 293254
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  293361 agcaagtgtactaaatactatcgaagtagtaaaaa-tattgttcccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 293263  T
Q  255 aattatttt 263  Q
    |||||||||    
T  293262 aattatttt 293254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 5179 - 5286
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||| ||||||||| ||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5179 agcaagtgcactaaataccatcgaagtagtaaaa-atatcgttaccacgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 5277  T
Q  255 aattatttt 263  Q
    |||||||||    
T  5278 aattatttt 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 526 - 418
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||| |    
T  526 agcaagtgcactaaatactatcgaagtagtaaaaa-tatcgttcccacgagaactgtgttaatctcaatttagaaataaagtaaatatttaagatgtaaa 428  T
Q  255 aattattttg 264  Q
    || |||||||    
T  427 aaatattttg 418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 268
Target Start/End: Original strand, 3061 - 3179
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgtt------aatctcaatttagaaataaagtaaatatttagga 248  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||      ||||||||||||| |||  |||||||||||||||    
T  3061 agcaagtgtactaaatactatcgaagtagtaaaa-atatcgttcccacgaggactgtgttaatctcaatctcaatttagcaatttagtaaatatttagga 3159  T
Q  249 tgtataaattattttgttta 268  Q
    ||||||||||||||||||||    
T  3160 tgtataaattattttgttta 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 3566 - 3668
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||| ||||||| ||| ||||||||    
T  3566 agcaagtgtactaaatactattgaagtaataaaa-atatcgttctcacgaggactgtgttaatctcaatttagtaataaggtaaataattaagatgtata 3664  T
Q  255 aatt 258  Q
    ||||    
T  3665 aatt 3668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 258 - 154
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaa---tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    |||||||||||||||||||||||||||| ||||||    |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  258 agcaagtgtactaaatactatcgaagtagtaaaaatatctatcattcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgt 159  T
Q  252 ataaa 256  Q
    |||||    
T  158 ataaa 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 7494 - 7593
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    |||||||||||||||||||||||||||| |||    | ||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7494 agcaagtgtactaaatactatcgaagtagtaa----tgtcgttcctatgaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 62868 - 62764
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaa---tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    |||||||||||||||||||||||||||| ||||||    |||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  62868 agcaagtgtactaaatactatcgaagtagtaaaaatatctatcattcccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaagatgt 62769  T
Q  252 ataaa 256  Q
    |||||    
T  62768 ataaa 62764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 64205 - 64138
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||| ||||| |||||| ||||||||||||||||||| || |||||||||||    
T  64205 gcaagtgtaccaaatactatcaaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 64138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 2822 - 2728
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2822 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgttt 2728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 8039 - 8104
Alignment:
Q  206 gactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8039 gactgtgttaatctcaatttagcaataaagtaaatatttaggatgtataaattattttgtttagat 8104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 1336 - 1434
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||||||||||| ||  ||||  |||| |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  1336 atcgaagtaataaaataagttcgtgtccacgaggactctgttaatctcaatttagcaataaagtaaatatttaggacgtataaattattttgtttagat 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 5707 - 5589
Alignment:
Q  155 agcaagtgtactaaatact--atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgt 251  Q
    ||||||||||||||| |||  ||||||||||||||| ||  ||||  |||| |||||||| ||||||||||||||| ||||||||||||||||||||| |    
T  5707 agcaagtgtactaaa-actgcatcgaagtaataaaataagttcgtatccacgaggactgttttaatctcaatttagtaataaagtaaatatttaggatat 5609  T
Q  252 ataaattattttgtttagat 271  Q
    ||||||||||||||||||||    
T  5608 ataaattattttgtttagat 5589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 19738 - 19645
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatg 250  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| | ||| || |||||||||||||    
T  19738 gcaagtgtaccaaatactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttaatctcaatttagcagtaacgttaatatttaggatg 19645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 27446 - 27352
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| ||  ||||  |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  27446 atcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaatttagcaataaagtaaatatttaggatgtgtaaattattttgttt 27352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 366 - 302
Alignment:
Q  207 actgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  366 actgtgttaatctcaatttagcaataaagtaaatatttaggatgaataaattattttgtttagat 302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 442 - 374
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  442 ccacgaggactgtgttaatctcaatttagcaatatagtaaatatttaggatgtataaattattttgttt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 477 - 372
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaa---tatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    |||||||||| ||||||||| |||||| |||||||   |||||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||||||     
T  477 gcaagtgtaccaaatactattgaagtagtaaaaaaaaatatcgttcccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtg 378  T
Q  253 taaatt 258  Q
    ||||||    
T  377 taaatt 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 174 - 267
Target Start/End: Complemental strand, 248855 - 248761
Alignment:
Q  174 atcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgttt 267  Q
    ||||||||||||||| ||  ||||  |||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  248855 atcgaagtaataaaataagttcgtgtccacgaggactgtgttgatctcaatttagcaataaagtaaatattaaggatgtataaattattttgttt 248761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 266
Target Start/End: Complemental strand, 92781 - 92671
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaatttagaaataaag-taaatatttaggatgtata 254  Q
    |||||||||| ||  |||||||||||| |||||| |||||||||||| |||||||||||| |||||| || | ||||||| | | |||||||||||| ||    
T  92781 gcaagtgtaccaataactatcgaagtagtaaaaa-tatcgttcccacgaggactgtgttattctcaacttggcaataaagtttattatttaggatgtgta 92683  T
Q  255 aattattttgtt 266  Q
    ||||||||||||    
T  92682 aattattttgtt 92671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 1695 - 1807
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaatat-----cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||||||||||  |||     |||  ||||||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  1695 agcaagtgtactaaa-actatcgaagtaataaaatttataagttcgtatccacaaggactgtgttaatctcaatttagcaataaggttaatatctaggat 1793  T
Q  250 gtataaattatttt 263  Q
    || |||||||||||    
T  1794 gtgtaaattatttt 1807  T

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Target: scaffold0015 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 271
Target Start/End: Complemental strand, 198453 - 198382
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaattattttgtttagat 271  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||    
T  198453 ccacgaggactgtgttaatttcaatttagcaataaagtaaatatttaggat-tataaaatattttgtttagat 198382  T

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Target: scaffold0014 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 228982 - 228879
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||   ||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  228982 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 228884  T
Q  254 aaatt 258  Q
    |||||    
T  228883 aaatt 228879  T

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Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 224056 - 223953
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||||||||||||||||| ||  ||||  | |  ||||||||||||||||||| |||| |||||||| ||||| |||||||| |    
T  224056 agcaagtgtactaaa-actatcgaagtaataaaataagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 223958  T
Q  254 aaatt 258  Q
    |||||    
T  223957 aaatt 223953  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 258
Target Start/End: Complemental strand, 2773 - 2687
Alignment:
Q  173 tatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||||||||||||||| ||  ||||  |||||||||||||||||||||||| |||| |||||||| ||||| |||||||| ||||||    
T  2773 tatcgaagtaataaaataagttcgtatccacaaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaatt 2687  T

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Target: scaffold0360; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 258
Target Start/End: Complemental strand, 6620 - 6519
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaatat-cgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| | |||||||||||||||| | || |||  |||| ||||||||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  6620 caagtgtactaaaaa-tatcgaagtaataaaataaattcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaa 6522  T
Q  256 att 258  Q
    |||    
T  6521 att 6519  T

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Target: scaffold2073 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 640 - 752
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata-----tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggat 249  Q
    ||||||||||||||| ||||||||||| ||||||  ||     ||||  ||||| ||||||||||||||||||||||| ||||| || ||||| ||||||    
T  640 agcaagtgtactaaa-actatcgaagtgataaaatttacaagttcgtatccacagggactgtgttaatctcaatttagcaataaggttaatatctaggat 738  T
Q  250 gtataaattatttt 263  Q
    || |||||||||||    
T  739 gtgtaaattatttt 752  T

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Target: scaffold0737 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 155 - 257
Target Start/End: Original strand, 7121 - 7224
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgta 252  Q
    ||||||||||||||| |||||||||||||||||||  |  ||||  |||| ||||| ||||||||||||| |||| |||||||| ||||| ||||||||     
T  7121 agcaagtgtactaaa-actatcgaagtaataaaaataagttcgtatccacgaggacggtgttaatctcaacttagcaataaagttaatatctaggatgtg 7219  T
Q  253 taaat 257  Q
    |||||    
T  7220 taaat 7224  T

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Target: scaffold0065 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 58460 - 58524
Alignment:
Q  158 aagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaatctcaat 223  Q
    |||||||| |||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||    
T  58460 aagtgtaccaaatactatcgaagtagtaaaa-atatcgttcccaaaaggactgttttaatctcaat 58524  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 67614 - 67715
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataa 255  Q
    ||||||||||||| ||||| |||||||||||| ||  ||||  |||| ||||||||||||||||||| || | |||||||| ||||| |||||||| |||    
T  67614 caagtgtactaaa-actatggaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttggcaataaagttaatatctaggatgtgtaa 67712  T
Q  256 att 258  Q
    |||    
T  67713 att 67715  T

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Target: scaffold0062; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 52663 - 52766
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    |||||||| |||||| |||||||||||||||||| ||  ||||  |||| |||||| ||||||| |||| |||| |||||||| ||||| |||||||| |    
T  52663 agcaagtgcactaaa-actatcgaagtaataaaataagttcgtatccacgaggactatgttaatttcaacttagcaataaagttaatatctaggatgtgt 52761  T
Q  254 aaatt 258  Q
    |||||    
T  52762 aaatt 52766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 20404 - 20301
Alignment:
Q  155 agcaagtgtactaaatactatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtat 253  Q
    ||||||||||||||| |||| ||||||||||||| ||  || |  |||| ||||||||||||||||||| |||| |||||||| ||| | |||||||| |    
T  20404 agcaagtgtactaaa-actaccgaagtaataaaataagttcatatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatgtgt 20306  T
Q  254 aaatt 258  Q
    |||||    
T  20305 aaatt 20301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 13939 - 13859
Alignment:
Q  171 actatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatg 250  Q
    |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||| | |||||||    
T  13939 actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatg 13859  T

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Target: scaffold0214; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 27955 - 27875
Alignment:
Q  171 actatcgaagtaataaaa-aatatcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatg 250  Q
    |||||||||||||||||| ||  ||||  |||| ||||||||||||||||||| |||| |||||||| ||| | |||||||    
T  27955 actatcgaagtaataaaataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatg 27875  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 118227 - 118330
Alignment:
Q  157 caagtgtactaaatactatcgaagtaataaaaaata--tcgttcccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtata 254  Q
    ||||||||||||| |||||||||||||||||||  |  ||||  |||| |||| |||||||||||||||| |  |||||||| | ||| |||||||| ||    
T  118227 caagtgtactaaaaactatcgaagtaataaaaataagttcgtatccacgaggattgtgttaatctcaattcaacaataaagttattatctaggatgtgta 118326  T
Q  255 aatt 258  Q
    ||||    
T  118327 aatt 118330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 90069 - 90010
Alignment:
Q  199 ccacaaggactgtgttaatctcaatttagaaataaagtaaatatttaggatgtataaatt 258  Q
    |||| |||||||||||||||||||||||| ||||| || ||||| |||||||| ||||||    
T  90069 ccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatgtgtaaatt 90010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 1850 - 1917
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||  | |||||||||||||||||||| |||| | |||||||||||    
T  1850 gcaagtgtaccaaatactatcgaagtggt-aaaaatatcgttcccacaagaactgattttaatctcaat 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 10751 - 10684
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||  ||||||||||||||| || |||||||||||    
T  10751 gcaagtgtaccaaatactatcgaagtagt-aaaaataatgttcccacaaggactggttttaatctcaat 10684  T

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Target: scaffold0191 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 4260 - 4193
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||| ||| |||||||||||||||| | |||||||||||    
T  4260 gcaagtgtaccaaatactatcgaagtagt-aaaattattgttcccacaaggactgattttaatctcaat 4193  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 19623 - 19557
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| ||| |||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  19623 gcaagtgtaccaaa-actatcgaagtagtaaaaa-tatcgttcccacaaggactggttttaatctcaat 19557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 29702 - 29636
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| ||| |||||||||||| |||||| ||||||||||||||||||| || |||||||||||    
T  29702 gcaagtgtaccaaa-actatcgaagtagtaaaaa-tatcgttcccacaaggactagttttaatctcaat 29636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 15755 - 15689
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggact-gtgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||    
T  15755 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactggttttaatctcaat 15689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 31438 - 31372
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactg-tgttaatctcaat 223  Q
    |||||||||| |||||||||||||||| | |||||||||||| |||||||||||| | |||||||||||    
T  31438 gcaagtgtaccaaatactatcgaagtagt-aaaaatatcgtt-ccacaaggactgattttaatctcaat 31372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 28437 - 28497
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  28437 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 28497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 27702 - 27642
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  27702 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 27642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 26656 - 26716
Alignment:
Q  156 gcaagtgtactaaatactatcgaagtaataaaaaatatcgttcccacaaggactgtgttaat 217  Q
    |||||||||| ||  |||||||||||| ||| |||||||||| ||||||||||||| |||||    
T  26656 gcaagtgtaccaataactatcgaagtagtaataaatatcgtt-ccacaaggactgtattaat 26716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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