View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17081_high_43 (Length: 280)
Name: NF17081_high_43
Description: NF17081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17081_high_43 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 37157486 - 37157750
Alignment:
| Q |
1 |
atgacaagccaccagaggaattgggctctagccgagaatacaatgttgacatgataccgaaggtaacttttctcatatttcacgacatttagatcaacag |
100 |
Q |
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| T |
37157486 |
atgacaagccaccagaggaattgggctctagccgagaatacaatgttgacatgataccgaaggtaacttttctcatatttcacgacctttagatcaacag |
37157585 |
T |
|
| Q |
101 |
aaaatttgatgttagaatttgtatttgttttttaatttgctgataaagcatcgaaacattaatatttatcggtccttacttgtatgttagcatttgtaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37157586 |
aaaatttgatgttagaatttgtatttgttttttaatttgctgataaagcatcgaaacattaatatttatcggtccttacttgtatgttagcatttgtaga |
37157685 |
T |
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| Q |
201 |
caaggttctgtttctttctatttgagcatacagctattttgtaaaacaatttctaatgtgaaaaa |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37157686 |
caaggttctgtttctttctatttgagcatacagctattttgtaaaacaatttataatgtgaaaaa |
37157750 |
T |
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