View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17081_low_51 (Length: 248)

Name: NF17081_low_51
Description: NF17081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17081_low_51
NF17081_low_51
[»] chr7 (10 HSPs)
chr7 (1-229)||(14761647-14761876)
chr7 (69-141)||(38073565-38073637)
chr7 (69-143)||(21148499-21148573)
chr7 (71-136)||(45513089-45513154)
chr7 (1-137)||(39854083-39854223)
chr7 (82-144)||(6727207-6727269)
chr7 (69-143)||(20884447-20884521)
chr7 (71-141)||(38652630-38652700)
chr7 (98-138)||(21388009-21388049)
chr7 (97-141)||(31009904-31009948)
[»] chr5 (6 HSPs)
chr5 (1-177)||(17566732-17566909)
chr5 (2-143)||(10044140-10044282)
chr5 (69-144)||(25837431-25837506)
chr5 (71-141)||(28024110-28024180)
chr5 (69-113)||(21369225-21369269)
chr5 (98-140)||(42655897-42655939)
[»] chr1 (16 HSPs)
chr1 (1-141)||(12521329-12521469)
chr1 (69-147)||(21276527-21276605)
chr1 (69-143)||(3491404-3491478)
chr1 (2-113)||(15881122-15881233)
chr1 (69-136)||(38788843-38788910)
chr1 (69-136)||(48022823-48022890)
chr1 (71-114)||(48722697-48722740)
chr1 (69-138)||(943196-943265)
chr1 (33-143)||(52141467-52141577)
chr1 (69-138)||(298310-298380)
chr1 (69-114)||(5198905-5198950)
chr1 (71-112)||(13351543-13351584)
chr1 (83-136)||(38942767-38942820)
chr1 (71-144)||(47370282-47370355)
chr1 (105-145)||(8547436-8547476)
chr1 (105-145)||(8612675-8612715)
[»] chr6 (4 HSPs)
chr6 (69-143)||(12141683-12141757)
chr6 (98-142)||(154326-154370)
chr6 (73-143)||(33972582-33972652)
chr6 (83-139)||(3213641-3213697)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-142)||(260286-260427)
[»] chr2 (7 HSPs)
chr2 (1-138)||(41766326-41766463)
chr2 (72-138)||(14776385-14776451)
chr2 (14-111)||(43305549-43305646)
chr2 (1-114)||(32227477-32227592)
chr2 (102-148)||(929152-929198)
chr2 (69-114)||(40534329-40534374)
chr2 (69-141)||(35327744-35327816)
[»] chr3 (9 HSPs)
chr3 (69-153)||(28945930-28946014)
chr3 (69-149)||(37238751-37238831)
chr3 (69-144)||(28963352-28963427)
chr3 (69-143)||(13863580-13863654)
chr3 (69-116)||(21490480-21490527)
chr3 (71-143)||(50524230-50524302)
chr3 (71-114)||(12568627-12568670)
chr3 (71-114)||(13545091-13545134)
chr3 (69-114)||(972521-972566)
[»] chr4 (9 HSPs)
chr4 (69-140)||(22409323-22409394)
chr4 (2-141)||(30537918-30538058)
chr4 (1-145)||(10109261-10109405)
chr4 (69-142)||(20574848-20574921)
chr4 (2-59)||(32318558-32318616)
chr4 (69-141)||(38794106-38794178)
chr4 (1-59)||(24010262-24010321)
chr4 (108-145)||(23880202-23880239)
chr4 (92-140)||(42898962-42899010)
[»] chr8 (8 HSPs)
chr8 (71-141)||(38869869-38869939)
chr8 (2-143)||(6393583-6393724)
chr8 (69-145)||(11257964-11258040)
chr8 (69-141)||(36068414-36068486)
chr8 (1-114)||(8072459-8072572)
chr8 (71-143)||(36660694-36660766)
chr8 (69-144)||(30069691-30069766)
chr8 (105-144)||(6530440-6530479)
[»] scaffold0037 (1 HSPs)
scaffold0037 (108-145)||(19293-19330)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 14761876 - 14761647
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  14761876 ctaatagaaattttgtattgaaatttgtgtttatttattgttcaacatgtttaatattaatttttttcaattaaattcttatcattaatagaatgaaatt 14761777  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatgacccttataataaacctattggttaactcaacatatcactccactagatccttttaatgact 199  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14761776 aatatttaacatgtgtctttaggacacaagctaacatgacccttataataaacctattggttaactcaacatatcactccactagatccttttaatgact 14761677  T
Q  200 ctttcaatatcattaaaaattgcaaaagtg 229  Q
    ||||||||||||||||||||||||||||||    
T  14761676 ctttcaatatcattaaaaattgcaaaagtg 14761647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 38073637 - 38073565
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| | | ||| |||||| |||||||||||    
T  38073637 attaaattcttaccattaatggaatgaaattaatgtttaacatgtgccctaagggcacaagttaacatgaccc 38073565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 21148499 - 21148573
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||||||||| |||||||| ||| || ||||||||||||||||| | ||||| |||||  |||||||||||||    
T  21148499 attaaattcttaccattaataaaataaagttaatgtttaacatgtgcccttagggcacaaattaacatgaccctt 21148573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 45513154 - 45513089
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacat 136  Q
    |||||||||| ||||||| ||||||||||| || |||||||||||||| ||| |||||| ||||||    
T  45513154 taaattcttaccattaatggaatgaaattagtgcttaacatgtgtcttaagggcacaagttaacat 45513089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 39854223 - 39854083
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnn---caattaaattcttatcattaatagaatgaa 96  Q
    |||||| ||||| |||||||||| |||||||  |||||||||||| || |||||||||||          |||||||||| ||| ||||||| |||||||    
T  39854223 ctaatataaattatgtattgaaaattgtgttaatttattgttcaaaatatttaatattaattttttttttcaattaaatttttaccattaatggaatgaa 39854124  T
Q  97 attaatgtttaacatgtgtctttaggacacaagctaacatg 137  Q
    ||||||| ||||||| || | | ||| |||||| |||||||    
T  39854123 attaatgcttaacatatgccctaagggcacaagttaacatg 39854083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 6727207 - 6727269
Alignment:
Q  82 cattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    |||||||  ||||||||||||||||||||| || | | |||||||||| |||||||| |||||    
T  6727207 cattaatgaaatgaaattaatgtttaacatatgccataaggacacaagttaacatgatcctta 6727269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 20884521 - 20884447
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    ||||||||||||  ||||||  ||||||||||||| |||||||||  | | ||| |||||| |||||||||||||    
T  20884521 attaaattcttactattaatgaaatgaaattaatgcttaacatgtaccctaagggcacaagttaacatgaccctt 20884447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 38652700 - 38652630
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    |||||||||| || |||| |||||| |||||||||||||||||  | | ||| |||||| |||||||||||    
T  38652700 taaattcttaccactaatggaatgacattaatgtttaacatgtaccctaagggcacaagttaacatgaccc 38652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 21388049 - 21388009
Alignment:
Q  98 ttaatgtttaacatgtgtctttaggacacaagctaacatga 138  Q
    |||||| |||||||||||| |||||||||||| ||||||||    
T  21388049 ttaatgcttaacatgtgtcattaggacacaagttaacatga 21388009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 31009904 - 31009948
Alignment:
Q  97 attaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||||||||||||||||||  || |||||| |||||||||||    
T  31009904 attaatgtttaacatgtgtcttacgggcacaagttaacatgaccc 31009948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 17566732 - 17566909
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  17566732 ctaatagaaattttgtattgaaatttgtgtttatttattgttcaacatgtttaatattaatttttttcaattaaattcttatcattaatagaatgaaatt 17566831  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatgacccttataataaacctattggttaactcaacatatcact 177  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  17566832 aatgtttaacatgtgcctttaggacacaaactaacatgacccttataataaacctattggttaactcaacgtatcact 17566909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 10044282 - 10044140
Alignment:
Q  2 taatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatta 100  Q
    ||||||||||| |||||||||| |||||||  ||||||| |||| ||||||||||||||         | |||||||||| |||||||  ||||||||||    
T  10044282 taatagaaattatgtattgaaagttgtgttaatttattgctcaaaatgtttaatattaattatttttcaataaattcttaccattaatgaaatgaaatta 10044183  T
Q  101 atgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
     |||||||||||| || | |||||||||| |||||||||||||    
T  10044182 gtgtttaacatgtatcctaaggacacaagttaacatgaccctt 10044140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 25837431 - 25837506
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||||| ||| || ||| ||||| ||||||||    
T  25837431 attaaattcttaccattaatataatgaaattaatgcttaacatgtgtcttaagggcataagttaacaagaccctta 25837506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 28024180 - 28024110
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||||||  ||||||||||||| |||||||||||||||||   ||||||||||||| |||||||||||    
T  28024180 taaattcttacaattaatagaatgacattaatgtttaacatgtacttttaggacacaagttaacatgaccc 28024110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 21369225 - 21369269
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgt 113  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  21369225 attaaattcttaccattaatggaatgaaattaatgtttaacatgt 21369269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 42655939 - 42655897
Alignment:
Q  98 ttaatgtttaacatgtgtctttaggacacaagctaacatgacc 140  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||    
T  42655939 ttaatgtttaacatgtgtcttaagggcacaagttaacatgacc 42655897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 12521329 - 12521469
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||| |||||| ||| || ||||  ||||||| |||| ||||||||||||||        ||||||||||||| ||||||||||||||||||    
T  12521329 ctaatagaaattatgtattaaaaattatgttaatttattgctcaaaatgtttaatattaattttttt-aattaaattcttaccattaatagaatgaaatt 12521427  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||||||||||||| ||||| |||||| ||||| |||||    
T  12521428 aatgtttaacatgtgtccttagggcacaagttaacacgaccc 12521469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 21276605 - 21276527
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacccttataa 147  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| | ||| |||||| |||||||||||||||||    
T  21276605 attaaattcttaccattaatagaatgaaattaatgcttaacatgtgtcctaagggcacaagttaacatgacccttataa 21276527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 3491478 - 3491404
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| | | ||| |||||| |||||||||||||    
T  3491478 attaaattcttaccattaatggaatgaaattaatgtttaacatgtgccctaagggcacaagttaacatgaccctt 3491404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 15881233 - 15881122
Alignment:
Q  2 taatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatta 100  Q
    ||||||||||||| ||||| | ||||||| | |||||||||||| ||||||||||||||        ||||||||||||| ||||||| |||||||||||    
T  15881233 taatagaaattttatattggagtttgtgtgtatttattgttcaaaatgtttaatattaattttttt-aattaaattcttaccattaatggaatgaaatta 15881135  T
Q  101 atgtttaacatgt 113  Q
    ||| |||| ||||    
T  15881134 atgcttaatatgt 15881122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 38788910 - 38788843
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacat 136  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| | | | |||||||| ||||||    
T  38788910 attaaattcttactattaatagaatgaaattaatgtttaacatgtgccataatgacacaagttaacat 38788843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 48022823 - 48022890
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacat 136  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||| | | ||| |||||| ||||||    
T  48022823 attaaattcttaccattaatggaatgaaattaatgtttaacatgtgccctaagggcacaagttaacat 48022890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 48722740 - 48722697
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  48722740 taaattcttaccattaatggaatgaaattaatgtttaacatgtg 48722697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 943196 - 943265
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatga 138  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||  | | ||| |||||| ||||||||    
T  943196 attaaattcttactattaatggaatgaaattaatgtttaacatgtaccctgagggcacaagttaacatga 943265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 52141577 - 52141467
Alignment:
Q  33 tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagcta 132  Q
    |||||||||||| ||||||||||||||         ||||||| |||| ||||| | |||||||||||||| ||||||| || | | ||| |||||| ||    
T  52141577 tttattgttcaaaatgtttaatattaattttttttcattaaatacttaccattagtggaatgaaattaatgcttaacatatgccctaagggcacaagtta 52141478  T
Q  133 acatgaccctt 143  Q
    |||||||||||    
T  52141477 acatgaccctt 52141467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 298310 - 298380
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatg-tgtctttaggacacaagctaacatga 138  Q
    ||||||||||||  |||||| |||||||||||||| |||||||| || ||| ||| |||||| ||||||||    
T  298310 attaaattcttactattaatggaatgaaattaatgcttaacatgttgccttaagggcacaagttaacatga 298380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 5198905 - 5198950
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    |||||||||||| |||| ||  ||||||||||||||||||||||||    
T  5198905 attaaattcttaccatttatgaaatgaaattaatgtttaacatgtg 5198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 13351584 - 13351543
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatg 112  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  13351584 taaattcttaccattaatggaatgacattaatgtttaacatg 13351543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 38942767 - 38942820
Alignment:
Q  83 attaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacat 136  Q
    |||||| |||||| ||||||| |||||||||||||| ||||| |||| ||||||    
T  38942767 attaatggaatgacattaatgcttaacatgtgtcttaaggacgcaagttaacat 38942820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 47370355 - 47370282
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    |||||||||| |||||||  ||||| ||||||| |||||||||| | | |  ||||||| ||||||||||||||    
T  47370355 taaattcttaccattaatgaaatgacattaatgcttaacatgtgccataattacacaagttaacatgaccctta 47370282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 8547436 - 8547476
Alignment:
Q  105 ttaacatgtgtctttaggacacaagctaacatgacccttat 145  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  8547436 ttaacacgtgcctttaggacacaagctagcatgacccttat 8547476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 145
Target Start/End: Original strand, 8612675 - 8612715
Alignment:
Q  105 ttaacatgtgtctttaggacacaagctaacatgacccttat 145  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  8612675 ttaacacgtgcctttaggacacaagctagcatgacccttat 8612715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 12141757 - 12141683
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||| |   |||||| |||||||||||||    
T  12141757 attaaatttttatcattaatggaatgaaattaatgtttaacatgtgtcttaaatgcacaagttaacatgaccctt 12141683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 154326 - 154370
Alignment:
Q  98 ttaatgtttaacatgtgtctttaggacacaagctaacatgaccct 142  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||    
T  154326 ttaatgtttaacatgtgtcttaagggcacaagttaacatgaccct 154370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 33972652 - 33972582
Alignment:
Q  73 aattcttatcattaatagaatgaaattaatgtttaacatgtgtctttagga-cacaagctaacatgaccctt 143  Q
    |||||||| ||||||| |||||||||||||| |||||||||| || || || |||||| |||||||||||||    
T  33972652 aattcttaccattaatggaatgaaattaatgcttaacatgtg-ctctaagagcacaagttaacatgaccctt 33972582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 3213697 - 3213641
Alignment:
Q  83 attaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgac 139  Q
    |||||| ||||||||||||||||||||||||| | | | ||||| || |||||||||    
T  3213697 attaatggaatgaaattaatgtttaacatgtgccctaaagacacgagttaacatgac 3213641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 260427 - 260286
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||| ||||||||||||||||||  |||||||||||| ||||||||| ||||       ||| |||||||||| ||||||| |||||| |||    
T  260427 ctaatagaaattatgtattgaaatttgtgttaatttattgttcaaaatgtttaatgttaatttttttcaa-taaattcttaccattaatggaatgacatt 260329  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatgaccct 142  Q
    |||| ||||||||   | | ||| |||||| ||||||||||||    
T  260328 aatgcttaacatggaccctaagggcacaagttaacatgaccct 260286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 41766326 - 41766463
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||| ||||| |||||||||| ||||||| |||||||| |||| ||||||||||||||       ||| ||| || ||| |||||||  |||||||||    
T  41766326 ctaatataaattatgtattgaaaattgtgttattttattgctcaaaatgtttaatattaatttttttcaactaattt-ttaccattaattaaatgaaatt 41766424  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatga 138  Q
    ||||||||||||||||| | ||| |||||| ||||||||    
T  41766425 aatgtttaacatgtgtcatgagggcacaagttaacatga 41766463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 14776385 - 14776451
Alignment:
Q  72 aaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatga 138  Q
    ||||||||| |||||||  |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  14776385 aaattcttaccattaatgaaatgaaattaatgtttaacatgtgtcctaaggacacaagttaacatga 14776451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 43305549 - 43305646
Alignment:
Q  14 tgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaattaatgtttaacat 111  Q
    ||||||| ||||||||||| |||||||||||| || |||||||||||       |||||||||| ||| ||||||| |||||||||||||| |||||||    
T  43305549 tgtattggaatttgtgtttatttattgttcaaaatatttaatattaatttttt-caattaaattattaccattaatggaatgaaattaatgcttaacat 43305646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32227477 - 32227592
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaa-nnnnnnncaattaaattcttatcattaatagaatgaaat 98  Q
    |||||||||||| |||||||||| |||||||  ||||||||| || ||||||||||||||          |||||||| ||| ||||||| |||||||||    
T  32227477 ctaatagaaattatgtattgaaaattgtgttcatttattgtttaaaatgtttaatattaatttttttttcattaaattattaccattaatggaatgaaat 32227576  T
Q  99 taatgtttaacatgtg 114  Q
    ||||| ||||||||||    
T  32227577 taatgcttaacatgtg 32227592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 929152 - 929198
Alignment:
Q  102 tgtttaacatgtgtctttaggacacaagctaacatgacccttataat 148  Q
    ||||||||||||||| |||||||||||| |||||||| |||| ||||    
T  929152 tgtttaacatgtgtccttaggacacaagttaacatgatccttttaat 929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 40534329 - 40534374
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    ||||||||||||  |||||| | |||||||||||||||||||||||    
T  40534329 attaaattcttactattaatggtatgaaattaatgtttaacatgtg 40534374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 35327816 - 35327744
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||||||||  ||||||  |||||||||||||||||||||||  | | ||| |||| | |||||||||||    
T  35327816 attaaattcttaatattaatgaaatgaaattaatgtttaacatgtaccctgagggcacatgttaacatgaccc 35327744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 28945930 - 28946014
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacccttataataaacc 153  Q
    |||||||| ||| ||||||| |||||||||||||||||||||| || ||| ||| |||||| ||||||||||| || ||||||||    
T  28945930 attaaatttttaccattaatggaatgaaattaatgtttaacatatgccttaagggcacaagttaacatgacccataaaataaacc 28946014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 37238831 - 37238751
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacccttataata 149  Q
    |||||||| ||| ||||||| |||||||||||||| |||||||||| | | ||| |||||| |||||||||||||| ||||    
T  37238831 attaaattattaccattaatggaatgaaattaatgcttaacatgtgccctaagggcacaagttaacatgacccttaaaata 37238751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 28963427 - 28963352
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    |||||||||||| ||||||| |||||||||||||| | |||||||| | | || ||||||| ||||||||||||||    
T  28963427 attaaattcttaccattaatggaatgaaattaatgctaaacatgtgccctaagaacacaagttaacatgaccctta 28963352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 13863654 - 13863580
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    ||||||||||||  ||||||  ||||||||||||| |||||||||||| | ||| |||||| |||||||||||||    
T  13863654 attaaattcttactattaatgaaatgaaattaatgcttaacatgtgtcctaagggcacaagttaacatgaccctt 13863580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 21490480 - 21490527
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtc 116  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  21490480 attaaatttttaccattaatataatgaaattaatgtttaacatgtgtc 21490527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 50524302 - 50524230
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||  || | | || ||| |||||||||||||    
T  50524302 taaatttttaccattaatagaatgaaattaatatttaacatgtgctttaaaggcataagttaacatgaccctt 50524230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 12568670 - 12568627
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    |||||||||| |||||||| |||||||||| |||||||||||||    
T  12568670 taaattcttaccattaataaaatgaaattagtgtttaacatgtg 12568627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 13545134 - 13545091
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    |||||||||| |||||||| |||||||||| |||||||||||||    
T  13545134 taaattcttaccattaataaaatgaaattagtgtttaacatgtg 13545091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 114
Target Start/End: Original strand, 972521 - 972566
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtg 114  Q
    |||||||||||| |||||||  ||||||||||||| ||||||||||    
T  972521 attaaattcttaccattaatgaaatgaaattaatgcttaacatgtg 972566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 22409394 - 22409323
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacc 140  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||  || ||| |||||| ||||||||||    
T  22409394 attaaattcttaccattaatggaatgaaattaatgtttaacatgtgcattaagggcacaagttaacatgacc 22409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 30538058 - 30537918
Alignment:
Q  2 taatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatta 100  Q
    ||||||||||| |||||||||| |||||||  ||||||| |||| |||||||||||| |       | |||||||||||| ||||| | |||||||| ||    
T  30538058 taatagaaattatgtattgaaaattgtgttaatttattgctcaaaatgtttaatattcatttttttccattaaattcttaccattattggaatgaaacta 30537959  T
Q  101 atgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    |||||||||||||| | | |||  ||||| |||||||||||    
T  30537958 atgtttaacatgtgccctaagggaacaagttaacatgaccc 30537918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 10109261 - 10109405
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||| |||||||||| |||||||  ||||||| |||| ||||||||||||||       | || ||||| ||| ||||| |  ||||||| |    
T  10109261 ctaatagaaattatgtattgaaaattgtgttaatttattgctcaaaatgtttaatattaacttttttc-atcaaatttttaccattattgaaatgaaaat 10109359  T
Q  100 aatgtttaacatgtgtctttaggacacaagctaacatgacccttat 145  Q
    ||||||||||||||| | | | |||||||| |||||||||||||||    
T  10109360 aatgtttaacatgtgccctaaagacacaagttaacatgacccttat 10109405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 20574921 - 20574848
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccct 142  Q
    ||||||||||||  || ||| ||||||||||||||||||||||||| | | ||| |||||| ||||||||||||    
T  20574921 attaaattcttactatcaatggaatgaaattaatgtttaacatgtgccctaagggcacaagttaacatgaccct 20574848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 32318558 - 32318616
Alignment:
Q  2 taatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaa 59  Q
    ||||||||||| |||||||||| |||||||  |||||||||||| ||||||||||||||    
T  32318558 taatagaaattatgtattgaaaattgtgttaatttattgttcaaaatgtttaatattaa 32318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 38794106 - 38794178
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||||||||  |||||| |||||||||||||| |||||||| | | | ||| |||||| |||||||||||    
T  38794106 attaaattcttactattaatggaatgaaattaatgcttaacatgggccctaagggcacaagttaacatgaccc 38794178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24010321 - 24010262
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaa 59  Q
    |||||||||||| |||||||||| |||||||  |||||||| ||| ||||||||||||||    
T  24010321 ctaatagaaattatgtattgaaaattgtgttaatttattgtccaaaatgtttaatattaa 24010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 23880202 - 23880239
Alignment:
Q  108 acatgtgtctttaggacacaagctaacatgacccttat 145  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  23880202 acatgtgtctttagggcacaagttaacatgacccttat 23880239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 42899010 - 42898962
Alignment:
Q  92 atgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacc 140  Q
    ||||||||||||||||||||||| | | |||||||||| ||| ||||||    
T  42899010 atgaaattaatgtttaacatgtgccctaaggacacaagttaagatgacc 42898962  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 38869869 - 38869939
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    ||||||| || ||||||| ||||||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  38869869 taaattcataccattaatggaatgaaattaatgtttaacatgtgccttaagggcacaagttaacatgaccc 38869939  T

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Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 6393583 - 6393724
Alignment:
Q  2 taatagaaattttgtattgaaatttgtgttt-tttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatta 100  Q
    ||||||||||| |||||  ||| |||||||  |||| || |||| ||||||||||||||       |||| ||||||||| ||||||| |||||| ||||    
T  6393583 taatagaaattatgtataaaaaattgtgttaatttactgctcaaaatgtttaatattaattttttacaat-aaattcttaccattaattgaatgacatta 6393681  T
Q  101 atgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||||||||||||| | |||||||||  || ||||||||||    
T  6393682 atgtttaacatgtgtcataaggacacaaattagcatgaccctt 6393724  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 11257964 - 11258040
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgacccttat 145  Q
    |||||||||||| ||||| | |||||||| |||||||||||||||| | | ||| |||||| |||||||||||||||    
T  11257964 attaaattcttaccattatttgaatgaaaataatgtttaacatgtgccctaagggcacaagttaacatgacccttat 11258040  T

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Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 36068414 - 36068486
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccc 141  Q
    |||||||||||| ||||| | |||||||| ||||| |||||||||||||| ||| |||||| |||||||||||    
T  36068414 attaaattcttaccattattggaatgaaaataatgcttaacatgtgtcttgagggcacaagttaacatgaccc 36068486  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8072572 - 8072459
Alignment:
Q  1 ctaatagaaattttgtattgaaatttgtgtt-ttttattgttcaacatgtttaatattaannnnnnncaattaaattcttatcattaatagaatgaaatt 99  Q
    |||||||||||| |||||||||| |||||||  ||||| |||||| ||||||||||||||       | |||||||||||| ||||| | |||||||| |    
T  8072572 ctaatagaaattatgtattgaaaattgtgttaatttatggttcaaaatgtttaatattaatttttttc-attaaattcttaccattatttgaatgaaaat 8072474  T
Q  100 aatgtttaacatgtg 114  Q
    |||| ||||||||||    
T  8072473 aatgcttaacatgtg 8072459  T

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Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 36660694 - 36660766
Alignment:
Q  71 taaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctt 143  Q
    |||||||||| ||||||| ||| |||||||||| ||||||| || ||| ||| |||||| |||||||||||||    
T  36660694 taaattcttaccattaatggaacgaaattaatggttaacatatgccttaagggcacaagttaacatgaccctt 36660766  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 30069766 - 30069691
Alignment:
Q  69 attaaattcttatcattaatagaatgaaattaatgtttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    ||||||||||||| |||||| ||||||||| |||| |||||||||| | | ||  |||||| ||||||||||||||    
T  30069766 attaaattcttattattaatggaatgaaataaatgcttaacatgtgccctaagagcacaagttaacatgaccctta 30069691  T

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Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 6530440 - 6530479
Alignment:
Q  105 ttaacatgtgtctttaggacacaagctaacatgaccctta 144  Q
    |||||||||||| |||||||||||| ||||||||||||||    
T  6530440 ttaacatgtgtccttaggacacaagttaacatgaccctta 6530479  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 19330 - 19293
Alignment:
Q  108 acatgtgtctttaggacacaagctaacatgacccttat 145  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  19330 acatgtgtctttagggcacaagttaacatgacccttat 19293  T

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