View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17081_low_57 (Length: 207)
Name: NF17081_low_57
Description: NF17081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17081_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 179; Significance: 8e-97; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 179; E-Value: 8e-97
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 36790655 - 36790456
Alignment:
| Q |
1 |
ttttctatcaaaggcaaaagagacattgatactagtaacagtgttaaagacagttttaccaattgattgtttcagttcaagacttgcggcctagatagaa |
100 |
Q |
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| T |
36790655 |
ttttctatcaaaggcaaaagagacattgatactagtaacagtgttaaagacagttttaccaattgattgtttcagttcaagacttgcggcctagatagaa |
36790556 |
T |
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| Q |
101 |
caatgatgaacacagaatggctta----aaaacatgtataataatacataagacatatgaatttaatcaagaccaaaatcagagagttcctcagtataat |
196 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
36790555 |
caatgatgaacacagaatggcttaaaataaaacatgtataataatacataagacatatgaatttaatcaagaccaaaatcagagagttcctcaatataat |
36790456 |
T |
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