View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17081_low_6 (Length: 547)

Name: NF17081_low_6
Description: NF17081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17081_low_6
NF17081_low_6
[»] chr2 (68 HSPs)
chr2 (147-426)||(14488962-14489240)
chr2 (435-547)||(14489280-14489392)
chr2 (399-547)||(25411572-25411720)
chr2 (436-541)||(5470478-5470583)
chr2 (436-547)||(34760915-34761026)
chr2 (436-547)||(37803191-37803301)
chr2 (435-544)||(34679163-34679273)
chr2 (436-546)||(37431611-37431721)
chr2 (450-547)||(39918516-39918613)
chr2 (436-547)||(8857114-8857225)
chr2 (435-546)||(44617875-44617986)
chr2 (436-541)||(14943686-14943791)
chr2 (436-547)||(4925507-4925618)
chr2 (451-547)||(8553679-8553774)
chr2 (436-547)||(43028862-43028972)
chr2 (449-547)||(24472582-24472680)
chr2 (436-541)||(2609230-2609335)
chr2 (439-540)||(25333569-25333670)
chr2 (435-547)||(6510067-6510178)
chr2 (435-547)||(6592794-6592905)
chr2 (451-547)||(19895749-19895845)
chr2 (451-547)||(41196365-41196461)
chr2 (470-544)||(4576681-4576755)
chr2 (18-62)||(14487885-14487929)
chr2 (65-109)||(14488881-14488925)
chr2 (449-547)||(27489513-27489611)
chr2 (450-547)||(5008423-5008520)
chr2 (486-547)||(36195714-36195775)
chr2 (436-547)||(15022906-15023017)
chr2 (489-545)||(19399314-19399370)
chr2 (471-547)||(25092398-25092474)
chr2 (394-515)||(32969584-32969704)
chr2 (436-491)||(25453-25508)
chr2 (493-547)||(42445497-42445551)
chr2 (478-547)||(31827636-31827705)
chr2 (471-547)||(18969229-18969305)
chr2 (447-547)||(32013195-32013295)
chr2 (493-540)||(34123366-34123413)
chr2 (493-540)||(35698993-35699040)
chr2 (493-547)||(2936923-2936977)
chr2 (451-544)||(5362313-5362407)
chr2 (493-547)||(33004840-33004894)
chr2 (451-544)||(24306157-24306250)
chr2 (390-426)||(6592714-6592750)
chr2 (493-540)||(11362702-11362749)
chr2 (488-547)||(18709390-18709449)
chr2 (493-540)||(19025958-19026005)
chr2 (493-540)||(19256713-19256760)
chr2 (508-547)||(20436187-20436226)
chr2 (493-540)||(21552682-21552729)
chr2 (493-540)||(21568050-21568097)
chr2 (493-540)||(24858017-24858064)
chr2 (493-540)||(25888032-25888079)
chr2 (493-540)||(31784392-31784439)
chr2 (436-547)||(35718713-35718824)
chr2 (493-540)||(40493771-40493818)
chr2 (436-494)||(6592922-6592980)
chr2 (493-547)||(45395373-45395427)
chr2 (507-540)||(1374937-1374970)
chr2 (436-497)||(16043207-16043268)
chr2 (507-540)||(24205437-24205470)
chr2 (493-538)||(39620691-39620736)
chr2 (397-426)||(43028791-43028820)
chr2 (450-494)||(18969177-18969221)
chr2 (490-546)||(19206284-19206340)
chr2 (399-427)||(34100770-34100798)
chr2 (398-426)||(34679095-34679123)
chr2 (507-547)||(40711471-40711511)
[»] chr3 (82 HSPs)
chr3 (398-547)||(44436533-44436683)
chr3 (436-547)||(51315619-51315730)
chr3 (436-544)||(578551-578658)
chr3 (436-547)||(1938384-1938495)
chr3 (436-547)||(33329752-33329863)
chr3 (436-547)||(44585921-44586032)
chr3 (436-547)||(44433200-44433310)
chr3 (436-546)||(54719133-54719243)
chr3 (436-541)||(27178288-27178393)
chr3 (450-546)||(3916511-3916607)
chr3 (436-547)||(48348394-48348504)
chr3 (436-547)||(54464230-54464341)
chr3 (444-544)||(25843441-25843541)
chr3 (436-544)||(43747418-43747526)
chr3 (435-547)||(46226764-46226876)
chr3 (436-547)||(1814692-1814800)
chr3 (436-547)||(7218286-7218397)
chr3 (451-546)||(19404530-19404625)
chr3 (464-547)||(20432319-20432402)
chr3 (449-547)||(86654-86752)
chr3 (439-547)||(35359067-35359175)
chr3 (436-547)||(28712522-28712633)
chr3 (436-547)||(36567009-36567120)
chr3 (449-547)||(14856691-14856789)
chr3 (435-541)||(38177243-38177349)
chr3 (451-547)||(28204621-28204717)
chr3 (436-545)||(38957914-38958015)
chr3 (436-547)||(8024917-8025028)
chr3 (449-544)||(36687729-36687824)
chr3 (480-544)||(44624735-44624799)
chr3 (449-544)||(36677649-36677744)
chr3 (481-547)||(44127461-44127527)
chr3 (489-545)||(52008365-52008421)
chr3 (455-547)||(53184596-53184687)
chr3 (488-547)||(12759643-12759702)
chr3 (436-547)||(47189729-47189840)
chr3 (449-547)||(14340869-14340967)
chr3 (493-547)||(19391769-19391823)
chr3 (493-547)||(38511791-38511845)
chr3 (436-544)||(3192840-3192949)
chr3 (507-547)||(15978830-15978870)
chr3 (507-547)||(32204981-32205021)
chr3 (493-540)||(257577-257624)
chr3 (493-540)||(787224-787271)
chr3 (493-540)||(3212293-3212340)
chr3 (493-540)||(5577058-5577105)
chr3 (469-536)||(14992777-14992844)
chr3 (493-540)||(27748369-27748416)
chr3 (493-540)||(27857276-27857323)
chr3 (493-540)||(28097565-28097612)
chr3 (399-494)||(28944058-28944154)
chr3 (493-540)||(28964295-28964342)
chr3 (493-540)||(30200555-30200602)
chr3 (493-540)||(30760956-30761003)
chr3 (493-540)||(31577544-31577591)
chr3 (493-540)||(32458924-32458971)
chr3 (493-540)||(33252626-33252673)
chr3 (493-540)||(33576550-33576597)
chr3 (493-540)||(33933492-33933539)
chr3 (493-540)||(41223637-41223684)
chr3 (493-540)||(41281988-41282035)
chr3 (493-540)||(47530464-47530511)
chr3 (493-540)||(50033382-50033429)
chr3 (436-483)||(50802726-50802773)
chr3 (436-483)||(50873104-50873151)
chr3 (493-540)||(51842926-51842973)
chr3 (493-540)||(53191086-53191133)
chr3 (493-540)||(53531947-53531994)
chr3 (450-547)||(4474150-4474246)
chr3 (393-426)||(17773163-17773196)
chr3 (393-426)||(19074464-19074497)
chr3 (486-535)||(25154299-25154348)
chr3 (507-540)||(32508060-32508093)
chr3 (487-547)||(43586698-43586756)
chr3 (507-540)||(51214300-51214333)
chr3 (449-497)||(15976318-15976366)
chr3 (508-540)||(17483699-17483731)
chr3 (507-547)||(19914615-19914655)
chr3 (508-540)||(27984274-27984306)
chr3 (507-547)||(37182133-37182173)
chr3 (390-426)||(38957835-38957871)
chr3 (399-427)||(44436418-44436446)
[»] chr1 (63 HSPs)
chr1 (399-541)||(39642349-39642491)
chr1 (436-545)||(16874640-16874749)
chr1 (435-547)||(44672379-44672491)
chr1 (436-547)||(14978864-14978975)
chr1 (436-547)||(23220634-23220745)
chr1 (436-547)||(45739003-45739114)
chr1 (436-547)||(3377569-3377680)
chr1 (436-547)||(7579732-7579843)
chr1 (436-547)||(30849365-30849476)
chr1 (436-546)||(17760752-17760862)
chr1 (435-547)||(32295088-32295200)
chr1 (440-544)||(50226529-50226633)
chr1 (452-547)||(5287362-5287457)
chr1 (452-545)||(25085530-25085623)
chr1 (436-544)||(44436825-44436932)
chr1 (488-547)||(25486333-25486392)
chr1 (449-536)||(41997787-41997874)
chr1 (470-547)||(48319505-48319582)
chr1 (436-545)||(50401439-50401547)
chr1 (436-547)||(6320631-6320740)
chr1 (436-547)||(46572894-46573003)
chr1 (451-547)||(46912326-46912422)
chr1 (451-547)||(49426128-49426223)
chr1 (464-547)||(20224666-20224749)
chr1 (449-547)||(12960980-12961078)
chr1 (452-538)||(14190686-14190772)
chr1 (449-547)||(16298192-16298290)
chr1 (488-545)||(7060776-7060833)
chr1 (436-531)||(6569658-6569753)
chr1 (436-523)||(8301504-8301591)
chr1 (437-531)||(1096536-1096630)
chr1 (493-547)||(4243255-4243309)
chr1 (501-547)||(18216814-18216860)
chr1 (493-547)||(23208440-23208494)
chr1 (493-547)||(33871019-33871073)
chr1 (489-534)||(16545681-16545726)
chr1 (493-546)||(20017507-20017560)
chr1 (478-547)||(23480050-23480118)
chr1 (487-544)||(46880880-46880937)
chr1 (507-547)||(7598740-7598780)
chr1 (507-547)||(39427550-39427590)
chr1 (493-540)||(2371301-2371348)
chr1 (507-546)||(9517381-9517420)
chr1 (436-547)||(15659126-15659237)
chr1 (493-540)||(28503260-28503307)
chr1 (493-540)||(31797206-31797253)
chr1 (493-540)||(34867622-34867669)
chr1 (493-540)||(37029053-37029100)
chr1 (493-540)||(41585410-41585457)
chr1 (493-540)||(42407008-42407055)
chr1 (493-540)||(45885090-45885137)
chr1 (493-540)||(47113513-47113560)
chr1 (396-426)||(3377497-3377527)
chr1 (507-545)||(7061365-7061403)
chr1 (466-540)||(32341633-32341707)
chr1 (466-536)||(49056222-49056292)
chr1 (493-547)||(52149642-52149696)
chr1 (435-520)||(8009795-8009880)
chr1 (507-540)||(12690159-12690192)
chr1 (507-540)||(21727751-21727784)
chr1 (507-540)||(46320814-46320847)
chr1 (451-547)||(46505305-46505401)
chr1 (508-540)||(49227257-49227289)
[»] chr5 (60 HSPs)
chr5 (436-545)||(27904620-27904729)
chr5 (436-546)||(20512264-20512374)
chr5 (436-546)||(31080544-31080654)
chr5 (399-547)||(2974663-2974812)
chr5 (437-547)||(12406175-12406285)
chr5 (436-543)||(3333840-3333947)
chr5 (436-547)||(9852854-9852965)
chr5 (436-547)||(20629879-20629990)
chr5 (435-546)||(26702503-26702613)
chr5 (435-546)||(26972236-26972346)
chr5 (436-547)||(40276164-40276275)
chr5 (439-547)||(3999233-3999341)
chr5 (436-547)||(19340899-19341010)
chr5 (436-547)||(25910791-25910902)
chr5 (436-547)||(32391854-32391965)
chr5 (435-547)||(16132811-16132923)
chr5 (436-547)||(22300668-22300779)
chr5 (436-547)||(30604222-30604333)
chr5 (436-547)||(37897853-37897963)
chr5 (436-544)||(35166363-35166471)
chr5 (436-547)||(36798239-36798349)
chr5 (436-547)||(43098162-43098272)
chr5 (449-547)||(18403067-18403165)
chr5 (436-521)||(19131661-19131746)
chr5 (435-547)||(25363892-25364004)
chr5 (455-547)||(26563075-26563167)
chr5 (436-538)||(24405558-24405659)
chr5 (479-547)||(6130393-6130461)
chr5 (402-547)||(34320082-34320226)
chr5 (480-547)||(24779385-24779452)
chr5 (451-545)||(28446087-28446181)
chr5 (500-540)||(40297807-40297847)
chr5 (493-540)||(25566744-25566791)
chr5 (470-540)||(8340101-8340171)
chr5 (501-547)||(21066472-21066518)
chr5 (435-536)||(24134435-24134536)
chr5 (487-540)||(28736559-28736612)
chr5 (493-545)||(7623656-7623708)
chr5 (493-540)||(3020735-3020782)
chr5 (493-540)||(4125585-4125632)
chr5 (493-540)||(8755138-8755185)
chr5 (493-540)||(11480176-11480223)
chr5 (493-540)||(16666698-16666745)
chr5 (493-540)||(22925763-22925810)
chr5 (493-540)||(28388122-28388169)
chr5 (493-540)||(28620164-28620211)
chr5 (493-540)||(33825725-33825772)
chr5 (493-540)||(34168929-34168976)
chr5 (493-540)||(34606511-34606558)
chr5 (493-540)||(35055902-35055949)
chr5 (493-540)||(40768013-40768060)
chr5 (493-540)||(42739728-42739775)
chr5 (493-547)||(19849677-19849731)
chr5 (470-540)||(29183276-29183346)
chr5 (507-540)||(22052578-22052611)
chr5 (507-540)||(26323516-26323549)
chr5 (507-540)||(33204080-33204113)
chr5 (493-542)||(34734212-34734261)
chr5 (507-547)||(15526831-15526871)
chr5 (398-426)||(36798464-36798492)
[»] scaffold0025 (1 HSPs)
scaffold0025 (436-547)||(19164-19275)
[»] chr4 (81 HSPs)
chr4 (436-544)||(20112288-20112396)
chr4 (436-547)||(2016859-2016969)
chr4 (451-547)||(27978774-27978870)
chr4 (436-547)||(1420679-1420790)
chr4 (436-547)||(2654104-2654215)
chr4 (436-547)||(2836967-2837078)
chr4 (436-547)||(14449419-14449530)
chr4 (436-547)||(21597537-21597648)
chr4 (436-547)||(53312355-53312466)
chr4 (449-547)||(43074723-43074821)
chr4 (439-547)||(25909558-25909666)
chr4 (435-547)||(44356533-44356645)
chr4 (436-547)||(51362607-51362718)
chr4 (451-544)||(4796178-4796271)
chr4 (437-545)||(54855373-54855480)
chr4 (436-547)||(10059828-10059943)
chr4 (435-547)||(29697589-29697700)
chr4 (436-547)||(51233548-51233659)
chr4 (436-547)||(12719580-12719691)
chr4 (436-547)||(16292336-16292447)
chr4 (436-547)||(21871522-21871633)
chr4 (436-547)||(21927383-21927494)
chr4 (451-541)||(51371546-51371636)
chr4 (436-541)||(23759715-23759820)
chr4 (450-547)||(34567751-34567848)
chr4 (436-547)||(6637198-6637309)
chr4 (401-545)||(21322848-21322992)
chr4 (444-547)||(35383894-35383997)
chr4 (464-547)||(49185665-49185748)
chr4 (436-546)||(54983969-54984079)
chr4 (436-536)||(47999597-47999697)
chr4 (436-547)||(11824257-11824366)
chr4 (436-547)||(21451526-21451636)
chr4 (436-547)||(31553377-31553488)
chr4 (436-547)||(50769432-50769542)
chr4 (469-547)||(35393401-35393479)
chr4 (487-547)||(18937375-18937435)
chr4 (440-545)||(1571467-1571571)
chr4 (486-547)||(34771407-34771468)
chr4 (439-523)||(8965675-8965759)
chr4 (449-545)||(53924888-53924984)
chr4 (493-540)||(20472674-20472721)
chr4 (486-545)||(26089587-26089646)
chr4 (500-546)||(8070757-8070803)
chr4 (493-547)||(34158607-34158661)
chr4 (436-529)||(6207327-6207420)
chr4 (436-545)||(14016793-14016902)
chr4 (490-547)||(42526098-42526155)
chr4 (487-543)||(6614983-6615039)
chr4 (436-512)||(14060873-14060949)
chr4 (452-532)||(20118053-20118133)
chr4 (493-540)||(104325-104372)
chr4 (493-540)||(232833-232880)
chr4 (493-540)||(6386856-6386903)
chr4 (493-540)||(7119719-7119766)
chr4 (493-540)||(7666339-7666386)
chr4 (493-540)||(8891779-8891826)
chr4 (493-540)||(17554170-17554217)
chr4 (493-540)||(28982038-28982085)
chr4 (493-540)||(29432188-29432235)
chr4 (493-540)||(37973638-37973685)
chr4 (493-540)||(39946219-39946266)
chr4 (493-540)||(40350961-40351008)
chr4 (493-540)||(41205637-41205684)
chr4 (493-540)||(52114260-52114307)
chr4 (493-540)||(52310943-52310990)
chr4 (509-547)||(6768930-6768968)
chr4 (493-547)||(27751298-27751352)
chr4 (493-547)||(38371398-38371452)
chr4 (493-547)||(50513170-50513224)
chr4 (439-476)||(13826220-13826257)
chr4 (436-481)||(21957668-21957713)
chr4 (507-540)||(37289594-37289627)
chr4 (507-540)||(39136438-39136471)
chr4 (390-426)||(1571389-1571425)
chr4 (390-426)||(12719734-12719770)
chr4 (507-547)||(21537011-21537051)
chr4 (436-540)||(30998251-30998355)
chr4 (436-468)||(35615382-35615414)
chr4 (492-540)||(35835918-35835966)
chr4 (436-508)||(52865448-52865520)
[»] chr6 (49 HSPs)
chr6 (436-547)||(30349416-30349527)
chr6 (436-543)||(6036799-6036906)
chr6 (436-540)||(26311546-26311650)
chr6 (435-546)||(266248-266358)
chr6 (436-547)||(10727329-10727440)
chr6 (436-547)||(17532319-17532429)
chr6 (449-547)||(3812821-3812918)
chr6 (435-545)||(32143325-32143435)
chr6 (436-547)||(33399852-33399963)
chr6 (479-547)||(11351746-11351814)
chr6 (435-547)||(1377274-1377386)
chr6 (435-547)||(1385022-1385134)
chr6 (451-534)||(239093-239176)
chr6 (436-515)||(2853582-2853661)
chr6 (436-547)||(18031077-18031188)
chr6 (449-547)||(5003214-5003312)
chr6 (491-540)||(30965814-30965863)
chr6 (444-543)||(20474844-20474943)
chr6 (493-547)||(7324780-7324834)
chr6 (493-547)||(16765166-16765220)
chr6 (438-547)||(17248706-17248815)
chr6 (435-544)||(26601527-26601636)
chr6 (451-523)||(2840967-2841039)
chr6 (493-540)||(2565220-2565267)
chr6 (493-540)||(5606421-5606468)
chr6 (493-540)||(6261506-6261553)
chr6 (493-540)||(7391618-7391665)
chr6 (493-540)||(11615023-11615070)
chr6 (493-540)||(21008887-21008934)
chr6 (493-540)||(22279639-22279686)
chr6 (493-540)||(23291397-23291444)
chr6 (493-540)||(27223450-27223497)
chr6 (493-540)||(31951330-31951377)
chr6 (509-547)||(12766356-12766394)
chr6 (507-540)||(1815117-1815150)
chr6 (507-540)||(2100523-2100556)
chr6 (491-536)||(2203286-2203331)
chr6 (449-494)||(6036725-6036770)
chr6 (507-540)||(11277765-11277798)
chr6 (507-540)||(11446118-11446151)
chr6 (507-540)||(13042547-13042580)
chr6 (491-540)||(16735690-16735739)
chr6 (507-540)||(18683151-18683184)
chr6 (507-540)||(23883228-23883261)
chr6 (499-536)||(26171353-26171390)
chr6 (491-540)||(27771355-27771404)
chr6 (507-540)||(28930603-28930636)
chr6 (507-540)||(34705517-34705550)
chr6 (499-547)||(8223887-8223935)
[»] scaffold0015 (1 HSPs)
scaffold0015 (436-547)||(76930-77040)
[»] chr8 (61 HSPs)
chr8 (436-547)||(3676263-3676374)
chr8 (436-547)||(30539126-30539237)
chr8 (436-547)||(6807304-6807415)
chr8 (436-547)||(16982746-16982856)
chr8 (436-523)||(37813250-37813337)
chr8 (451-547)||(29044682-29044778)
chr8 (436-547)||(29657771-29657883)
chr8 (436-547)||(21486722-21486833)
chr8 (449-547)||(14880416-14880513)
chr8 (449-547)||(23702270-23702368)
chr8 (449-547)||(27545421-27545518)
chr8 (436-546)||(41487346-41487456)
chr8 (450-547)||(25144024-25144121)
chr8 (450-547)||(29790839-29790936)
chr8 (495-547)||(17071042-17071094)
chr8 (495-547)||(17577178-17577230)
chr8 (436-547)||(33298407-33298518)
chr8 (436-547)||(45177269-45177380)
chr8 (436-547)||(20853444-20853555)
chr8 (436-547)||(22192433-22192544)
chr8 (488-547)||(35213164-35213223)
chr8 (502-544)||(37263492-37263534)
chr8 (436-521)||(37939979-37940063)
chr8 (451-547)||(22846526-22846622)
chr8 (451-523)||(44269278-44269350)
chr8 (436-503)||(41602550-41602617)
chr8 (493-547)||(995128-995182)
chr8 (487-540)||(20057120-20057173)
chr8 (493-540)||(1985710-1985757)
chr8 (493-536)||(4132879-4132922)
chr8 (493-540)||(6641739-6641786)
chr8 (493-540)||(6745135-6745182)
chr8 (505-540)||(8834080-8834115)
chr8 (493-540)||(20095828-20095875)
chr8 (493-540)||(23233921-23233968)
chr8 (493-540)||(28596055-28596102)
chr8 (493-540)||(32318630-32318677)
chr8 (493-540)||(35735628-35735675)
chr8 (493-540)||(37953499-37953546)
chr8 (493-540)||(38166609-38166656)
chr8 (493-540)||(39626109-39626156)
chr8 (493-540)||(39635659-39635706)
chr8 (493-540)||(41625585-41625632)
chr8 (493-540)||(41788776-41788823)
chr8 (493-547)||(8287738-8287792)
chr8 (494-540)||(16531390-16531436)
chr8 (493-547)||(37277585-37277639)
chr8 (507-540)||(2321655-2321688)
chr8 (493-538)||(4167344-4167389)
chr8 (507-540)||(6014559-6014592)
chr8 (397-426)||(29044833-29044862)
chr8 (507-540)||(32332282-32332315)
chr8 (493-538)||(36788403-36788448)
chr8 (507-540)||(42524849-42524882)
chr8 (507-540)||(44886045-44886078)
chr8 (507-540)||(45209115-45209148)
chr8 (435-519)||(521607-521690)
chr8 (398-426)||(23702422-23702450)
chr8 (507-547)||(30358982-30359022)
chr8 (507-547)||(39515688-39515728)
chr8 (399-427)||(41602898-41602926)
[»] chr7 (61 HSPs)
chr7 (436-547)||(18504311-18504422)
chr7 (436-547)||(36580410-36580521)
chr7 (436-547)||(28785890-28786001)
chr7 (436-547)||(15029129-15029239)
chr7 (436-547)||(15107127-15107238)
chr7 (436-547)||(36903331-36903441)
chr7 (436-545)||(6726392-6726500)
chr7 (436-547)||(4049776-4049888)
chr7 (451-547)||(8073957-8074053)
chr7 (436-547)||(41243711-41243821)
chr7 (439-547)||(35250189-35250297)
chr7 (436-547)||(20184985-20185095)
chr7 (436-547)||(29834286-29834397)
chr7 (451-545)||(18186588-18186682)
chr7 (435-547)||(44312878-44312989)
chr7 (436-547)||(14247440-14247551)
chr7 (436-542)||(15348019-15348124)
chr7 (436-519)||(28350184-28350267)
chr7 (450-547)||(5172593-5172690)
chr7 (436-497)||(9500086-9500147)
chr7 (507-547)||(3319181-3319221)
chr7 (491-547)||(40872301-40872357)
chr7 (436-540)||(47731770-47731874)
chr7 (493-540)||(21782744-21782791)
chr7 (493-547)||(497246-497300)
chr7 (493-547)||(23740399-23740453)
chr7 (493-547)||(25987057-25987111)
chr7 (436-546)||(11374096-11374213)
chr7 (487-547)||(10097690-10097750)
chr7 (435-515)||(17876236-17876316)
chr7 (436-520)||(28350307-28350389)
chr7 (493-540)||(930833-930880)
chr7 (493-540)||(7974514-7974561)
chr7 (493-540)||(10319033-10319080)
chr7 (493-540)||(17757904-17757951)
chr7 (493-540)||(18073956-18074003)
chr7 (493-540)||(18295977-18296024)
chr7 (493-540)||(21917228-21917275)
chr7 (493-540)||(24236239-24236286)
chr7 (493-540)||(26612467-26612514)
chr7 (493-540)||(30757366-30757413)
chr7 (493-540)||(32555429-32555476)
chr7 (493-540)||(34288173-34288220)
chr7 (493-540)||(35711798-35711845)
chr7 (493-540)||(36376185-36376232)
chr7 (493-540)||(39976854-39976901)
chr7 (493-540)||(42997193-42997240)
chr7 (505-540)||(45231661-45231696)
chr7 (435-505)||(3318383-3318453)
chr7 (442-530)||(24433108-24433195)
chr7 (396-426)||(28350112-28350142)
chr7 (439-477)||(42256655-42256693)
chr7 (436-481)||(3381930-3381975)
chr7 (507-540)||(4061130-4061163)
chr7 (493-538)||(7195581-7195626)
chr7 (507-540)||(34533354-34533387)
chr7 (507-547)||(18852628-18852668)
chr7 (451-547)||(28472470-28472566)
chr7 (508-540)||(30699163-30699195)
chr7 (508-540)||(34404583-34404615)
chr7 (507-547)||(38879300-38879340)
[»] scaffold0328 (1 HSPs)
scaffold0328 (436-547)||(9479-9590)
[»] scaffold0011 (1 HSPs)
scaffold0011 (436-547)||(145421-145532)
[»] scaffold0248 (1 HSPs)
scaffold0248 (436-546)||(471-581)
[»] scaffold0137 (1 HSPs)
scaffold0137 (450-546)||(19995-20091)
[»] scaffold0417 (1 HSPs)
scaffold0417 (456-547)||(9425-9516)
[»] scaffold0194 (1 HSPs)
scaffold0194 (436-547)||(25035-25145)
[»] scaffold0062 (1 HSPs)
scaffold0062 (435-547)||(46210-46322)
[»] scaffold0372 (1 HSPs)
scaffold0372 (436-547)||(191-301)
[»] scaffold0166 (1 HSPs)
scaffold0166 (480-547)||(21768-21835)
[»] scaffold0578 (1 HSPs)
scaffold0578 (450-536)||(3157-3243)
[»] scaffold0041 (1 HSPs)
scaffold0041 (491-547)||(93925-93981)
[»] scaffold0951 (1 HSPs)
scaffold0951 (493-540)||(3830-3877)
[»] scaffold0864 (1 HSPs)
scaffold0864 (493-540)||(2769-2816)
[»] scaffold0352 (1 HSPs)
scaffold0352 (493-540)||(10078-10125)
[»] scaffold0078 (1 HSPs)
scaffold0078 (493-540)||(20767-20814)
[»] scaffold0022 (1 HSPs)
scaffold0022 (493-540)||(139316-139363)
[»] scaffold0001 (1 HSPs)
scaffold0001 (493-540)||(400830-400877)
[»] scaffold0777 (1 HSPs)
scaffold0777 (507-540)||(8-41)
[»] scaffold0283 (1 HSPs)
scaffold0283 (507-540)||(1323-1356)
[»] scaffold0014 (1 HSPs)
scaffold0014 (507-540)||(12799-12832)
[»] scaffold0809 (1 HSPs)
scaffold0809 (451-547)||(2896-2991)
[»] scaffold0725 (1 HSPs)
scaffold0725 (399-427)||(6718-6746)
[»] scaffold0227 (1 HSPs)
scaffold0227 (511-547)||(899-935)


Alignment Details
Target: chr2 (Bit Score: 177; Significance: 4e-95; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 147 - 426
Target Start/End: Original strand, 14488962 - 14489240
Alignment:
Q  147 ttcaaataaaatgaatgagattatttgtcgagtctctgatttatctaaaattaaaatatgtgaactttctcaatcttaaaattaaaaaccctatatgcga 246  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14488962 ttcaaataaaatgaatgagattctttgtcgagtctctgatttatctaaaattaaaatatgtgaactttctcaatcttaaaattaaaaaccctatatgcga 14489061  T
Q  247 gcactcatacatannnnnnngacgtggagaacactcaaacatattgatattgatgcttcaaaattttaaattatattgttattttttgagtggtgatttt 346  Q
    |||||||||||||       ||||||||||||||||  ||      ||||||||||||||||||||| ||||||||| |||||||||| | |||||||||    
T  14489062 gcactcatacatatttttttgacgtggagaacactcgtac------atattgatgcttcaaaatttttaattatatttttattttttgtgaggtgatttt 14489155  T
Q  347 atatctt-----ggtgttcaaacattacattgggtaaaaaattcatatttaaaataaaggcttaatagcagttttagccccctaa 426  Q
    |||| ||     | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  14489156 atattttgatacgatgttcaaacattacattgggtaaagaattcatatttaaaataaaggcttaatagcagttttagccctctaa 14489240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 14489280 - 14489392
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||| ||||  ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  14489280 ttacaaaaccgccccctaagttttgcacctgtggcagttttgacctccaagaccaattttgactcggtctacgctgatgtggcaccctacgtgaggtgcc 14489379  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  14489380 acgtgttattttt 14489392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 25411572 - 25411720
Alignment:
Q  399 aggcttaatagcagttttagccccctaagnnnnnnnttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgaca 498  Q
    |||||||||||||||||||||||||||||        |||||||||||| |||||||||||||  ||||| |||||| ||||||||  |||||||||||     
T  25411572 aggcttaatagcagttttagccccctaagaaaaaaagtacaaaaccgccccctaagttttgcatctgtggcagttttcacccccaataccaattttgact 25411671  T
Q  499 cggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||||||||||| || |||| |||||| |||| ||||||    
T  25411672 cggtctatgctgacgtggcaccataagtgatgtgccaggtgtaattttt 25411720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 436 - 541
Target Start/End: Complemental strand, 5470583 - 5470478
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||| ||  ||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5470583 tacaaaaccgccccttaagttttacatctgtggcagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagtgaggtgcca 5470484  T
Q  536 cgtgtt 541  Q
    ||||||    
T  5470483 cgtgtt 5470478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 34760915 - 34761026
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| |||||| ||||||| |||||||  |||||||||||  |||||||||||||||||||||||| |||||||| ||    
T  34760915 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacgtggtctatgctgacgtggcaccctaagtgaggtgtca 34761014  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  34761015 catgtttttttt 34761026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 37803191 - 37803301
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||| || | |||||||||| ||||||| ||||||||||||||||| || ||||| ||    
T  37803191 tacaaaaccgcctcctaagttttgcatttgtggcagttttgacccc-aatgtcaattttgactcggtctacgctgacgtggcaccctaagtaaggtgtca 37803289  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  37803290 cgtgttattttt 37803301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 435 - 544
Target Start/End: Original strand, 34679163 - 34679273
Alignment:
Q  435 ttacaaaaccgcctcc-taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgc 533  Q
    ||||||||||||| || |||||||||||||||||| ||||||| || ||||  | ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  34679163 ttacaaaaccgcccccctaagttttgcacatgtggcagttttggcctccaagacaaattttgacccggtctacgctgacgtggcaccctaagtgaggtgc 34679262  T
Q  534 cacgtgttatt 544  Q
    |||||||||||    
T  34679263 cacgtgttatt 34679273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 37431611 - 37431721
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| ||||  ||||||||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  37431611 tacaaaatcgcccactaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 37431710  T
Q  536 cgtgttatttt 546  Q
    | |||||||||    
T  37431711 catgttatttt 37431721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 39918516 - 39918613
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||| ||||||  |||||| ||||||| |||||||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  39918516 ctaagttttgcatatgtggctgttttggcccccaaggccaattttgactcggtcttcgctgacgtggcaccctaagtgaggtgccacgtgttattttt 39918613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 8857114 - 8857225
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||||||||||||||||  ||||| ||||||| ||||||| ||||||||||||  |||| | ||||| |||||||| ||  ||||||||||    
T  8857114 tacaaaaccgcctcctaagttttgcatttgtggcagttttggcccccaatgccaattttgacttggtcaacgctgatgtggcaccttaaatgaggtgcca 8857213  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  8857214 cgtgttattttt 8857225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 435 - 546
Target Start/End: Complemental strand, 44617986 - 44617875
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| |||||||||||||  ||||| ||||||| |||||||  ||||||||||| ||||||| |||||||||||||||||  ||||||| |    
T  44617986 ttacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtc 44617887  T
Q  535 acgtgttatttt 546  Q
    || |||||||||    
T  44617886 acctgttatttt 44617875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 436 - 541
Target Start/End: Complemental strand, 14943791 - 14943686
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||  ||||||||||||| ||||| | ||||| ||||||| || ||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  14943791 tacaaaaccgccctctaagttttgcacctgtggcatttttggcccccaaggctaattttgactcggtctacgctgatgtggcaccctaagtgaggtgcca 14943692  T
Q  536 cgtgtt 541  Q
    ||||||    
T  14943691 cgtgtt 14943686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 4925507 - 4925618
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||||||||||| |||||| |||||||||||| ||  |||||||||   | ||||| ||||||||||||||||| || ||||||||    
T  4925507 tacaaaaccgtcccctaagttttgcatatgtggcagttttgacccctaagaccaattttggttctgtctacgctgacgtggcaccctaagtaaggtgcca 4925606  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  4925607 cgtgttattttt 4925618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 8553774 - 8553679
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  ||||| ||||||| | ||||||| |||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8553774 taagttttgcatttgtggcagttttgtctcccaaagtcaattt-gactcggtctatgctgacgtgacaccctaagtgaggtgccacgtgttattttt 8553679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 43028862 - 43028972
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| ||||||| || | |  |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  43028862 tacaaaaccccc-cctaagttttgcatctgtggcagttttggcctctagggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 43028960  T
Q  536 cgtgttattttt 547  Q
     |||||||||||    
T  43028961 agtgttattttt 43028972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 24472680 - 24472582
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  ||||| ||||||| || |||| |||||||||||| | |||||  || ||||||||||||| |||||||||||||||||||||||    
T  24472680 cctaagttttgcatctgtggcagttttggccgccaatgccaattttgactccgtctacactaacgtggcaccctaagtgaggtgccacgtgttattttt 24472582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 436 - 541
Target Start/End: Complemental strand, 2609335 - 2609230
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| | |||||||| || |||||| |||||||||||||||   |||||||||| ||||||| ||||| ||||||||||| ||||| |||||    
T  2609335 tacaaaatcgccccataagttttacatatgtggcagttttgacccccaagatcaattttgactcggtctacgctgatgtggcaccctaagtgagttgcca 2609236  T
Q  536 cgtgtt 541  Q
    ||||||    
T  2609235 cgtgtt 2609230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 439 - 540
Target Start/End: Original strand, 25333569 - 25333670
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    |||||| || |||||||||||||| ||||| |||||||  | |||| ||||||||||||  |||||| ||||||||||||||||| || |||||||||||    
T  25333569 aaaaccaccccctaagttttgcacctgtggcagttttggtctccaaggccaattttgacttggtctacgctgacgtggcaccctaagtaaggtgccacgt 25333668  T
Q  539 gt 540  Q
    ||    
T  25333669 gt 25333670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 6510067 - 6510178
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| ||||| ||||||| |||||| ||||| | || |||| | |||||||||  || |||||| ||||||||||||||| ||||||||||    
T  6510067 ttacaaaaccgccccctaatttttgcatatgtggcagtttgg-cctccaaggtcaattttgaatcgatctatgttgacgtggcaccctaagtgaggtgcc 6510165  T
Q  535 acgtgttattttt 547  Q
    || ||||||||||    
T  6510166 acatgttattttt 6510178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 6592794 - 6592905
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| ||| ||||||||||||| |||||| ||||||| ||| ||| || ||||||||| | ||||| |||||| | |||||||| ||||||||||    
T  6592794 ttacaaaactgcc-cctaagttttgcatatgtggcagttttggccctcaatgctaattttgactcagtctacgctgacattgcaccctaagtgaggtgcc 6592892  T
Q  535 acgtgttattttt 547  Q
    ||||||| |||||    
T  6592893 acgtgtttttttt 6592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 19895845 - 19895749
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||| || |||||| ||||||  ||||||| |||||||||||  |||| ||||||||||| |||||||| ||||||||||| |||||||||||    
T  19895845 taagttttacatatgtggcagttttagcccccaatgccaattttgattcggtttatgctgacgtagcaccctaagtgaggtgccatgtgttattttt 19895749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 41196461 - 41196365
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| |||||| ||||||  ||||||| | |||||| |||  |||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  41196461 taagttttgcatatgtggaagtttttgcccccaatgtcaatttagacttggtctacgctgacgtggcaccctaagtgaggtgccacatgttattttt 41196365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 470 - 544
Target Start/End: Complemental strand, 4576755 - 4576681
Alignment:
Q  470 agttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    ||||||| ||||||  |||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||||    
T  4576755 agttttggcccccactgccaattttgactcggtctacgctggcgtggcaccctaagtgaggtgccacgtgttatt 4576681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 14487885 - 14487929
Alignment:
Q  18 agtccagaccaggatagtgtaaaacagaagttgtattcaattaca 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14487885 agtccagaccaggatagtgtaaaacagaagttgtattcaattaca 14487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 14488881 - 14488925
Alignment:
Q  65 ttacaagttacttgttaatcacaagttacatcgaaatatttagaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14488881 ttacaagttacttgttaatcacaagttacatcgaaatatttagaa 14488925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 27489513 - 27489611
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| |||||||  ||||| ||||||| || |||| | |||||||||| |||| || |||||||||||| |||| |||||||| ||||||||||||||    
T  27489513 cctaacttttgcatctgtggcagttttggcctccaagggcaattttgactcggtttacgctgacgtggcatcctaagtgaggtgacacgtgttattttt 27489611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 450 - 547
Target Start/End: Complemental strand, 5008520 - 5008423
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||  ||||| | ||||| ||| ||| | |||||||||| ||||||| ||||||||||||||||| ||||| |||||| |||| |||||    
T  5008520 ctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccacatgtttttttt 5008423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 36195775 - 36195714
Alignment:
Q  486 gccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  36195775 gccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccatgtgtttttttt 36195714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 15022906 - 15023017
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaag-ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||||| ||||| |||||||  ||||| ||||||| ||||| ||| |||| |||||| | ||||| |||||| ||||||||||  |||||||||    
T  15022906 tacaaaaccgcc-cctaaattttgcatttgtggcagttttggccccccaaggccaaatttgactcagtctacgctgacatggcaccctaattgaggtgcc 15023004  T
Q  535 acgtgttattttt 547  Q
    ||||||| |||||    
T  15023005 acgtgtttttttt 15023017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 19399370 - 19399314
Alignment:
Q  489 aattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  19399370 aattttgactcggtctacgctgacgtggcaccctaagtgaggttccacgtgttattt 19399314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 471 - 547
Target Start/End: Original strand, 25092398 - 25092474
Alignment:
Q  471 gttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||| |||| |||| |||||||||| ||||| |||||||||||||| |||| ||||||||| | |||||||||||    
T  25092398 gttttgtccccgaaagtcaattttgactcggtcaatgctgacgtggcatcctaagtgaggtgctatgtgttattttt 25092474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 394 - 515
Target Start/End: Original strand, 32969584 - 32969704
Alignment:
Q  394 aataaaggcttaatagcagttttagccccctaagnnnnnnnttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattt 493  Q
    |||| |||||||||||||||||||||||| ||||        ||||||| |||| |||||||||| ||  ||||| ||||||| | ||||| ||||||||    
T  32969584 aatataggcttaatagcagttttagcccc-taagaaaaaaactacaaaatcgccccctaagtttttcatttgtggcagttttggctcccaaggccaattt 32969682  T
Q  494 tgacacggtctatgctgacgtg 515  Q
    |||| ||||||| |||||||||    
T  32969683 tgactcggtctacgctgacgtg 32969704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 491
Target Start/End: Original strand, 25453 - 25508
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaat 491  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||    
T  25453 tacaaaaccgccccctaagttttgcacctgtggcagttttgacccccaaggccaat 25508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 42445497 - 42445551
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  42445497 ttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 42445551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 478 - 547
Target Start/End: Original strand, 31827636 - 31827705
Alignment:
Q  478 cccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||  |||||||||  ||||||| ||||||||||||||||| |||||||||||| |||| |||||    
T  31827636 cccccaaaatcaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgtttttttt 31827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 547
Target Start/End: Complemental strand, 18969305 - 18969229
Alignment:
Q  471 gttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||| ||||||||||||  || ||| ||||||||| ||| |||  ||||||| ||||||||||||||    
T  18969305 gttttgacccccaaggccaattttgactaggcctacgctgacgtgacactctaaatgaggtgtcacgtgttattttt 18969229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 447 - 547
Target Start/End: Complemental strand, 32013295 - 32013195
Alignment:
Q  447 ctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    ||||||||||||||| |||| | ||||||| ||| ||| | |||||||||| ||||| | ||| ||||| |||||||  ||| || ||||||||||||||    
T  32013295 ctcctaagttttgcaaatgtagcagttttggccctcaaggtcaattttgactcggtcaaggcttacgtgtcaccctaaatgacgtaccacgtgttatttt 32013196  T
Q  547 t 547  Q
    |    
T  32013195 t 32013195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 34123366 - 34123413
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  34123366 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 34123413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 35699040 - 35698993
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  35699040 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 35698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 2936977 - 2936923
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  2936977 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgttaatttt 2936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 544
Target Start/End: Complemental strand, 5362407 - 5362313
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaa-gccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||||| ||  ||||| ||||||| || ||||| |||||||||||| | ||||| ||||||||| || |||| |||||||||||| |||||||    
T  5362407 taagttttacaactgtggcagttttggcctccaaaagccaattttgactcagtctacgctgacgtgacatcctaagtgaggtgccacatgttatt 5362313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 33004894 - 33004840
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | |||||||||||||| ||||||||||||||||||| ||||||    
T  33004894 ttgactcggtcaacgctgacgtggcaccatacgtgaggtgccacgtgtcattttt 33004840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 544
Target Start/End: Complemental strand, 24306250 - 24306157
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||||||||||||||  |||| || ||||||| | ||||||||||  | |||| ||||| ||| ||||||| |||||||| ||| |||||||    
T  24306250 taagttttgcacatgtgacagttctggcccccaaggtcaattttgacttgatctacgctgatgtgacaccctaagtgaggtgtcacatgttatt 24306157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 6592714 - 6592750
Alignment:
Q  390 ttaaaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||||| ||||||||||||||||||||||||||||    
T  6592714 ttaaaatataggcttaatagcagttttagccccctaa 6592750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 11362749 - 11362702
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||| ||||||||||||||| ||||||||||||||||    
T  11362749 ttgactcggtcaatgttgacgtggcaccctaagtgaggtgccacgtgt 11362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 18709449 - 18709390
Alignment:
Q  488 caattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||| || ||||||||||||||||| |||| || |||||||||||||| || |||||    
T  18709449 caattttaactcggtctatgctgacgtgacaccttaagtgaggtgccacgtatttttttt 18709390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 19026005 - 19025958
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  19026005 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 19025958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 19256713 - 19256760
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  19256713 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 19256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 508 - 547
Target Start/End: Complemental strand, 20436226 - 20436187
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  20436226 ctgacgtggcaccctaagtgaggtgccacgtgtcattttt 20436187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 21552729 - 21552682
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  21552729 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 21552682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 21568050 - 21568097
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  21568050 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 21568097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 24858064 - 24858017
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  24858064 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 24858017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 25888079 - 25888032
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  25888079 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 25888032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 31784439 - 31784392
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  31784439 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 31784392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 35718713 - 35718824
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||  |||||||  ||||| ||||||| || |||| |||||||||||| | ||||| | ||| ||||||||||| ||||  |||||    
T  35718713 tacaaaaccgtcccctacattttgcatctgtggcagttttggcctccaaggccaattttgactcagtctacggtgatgtggcaccctaagtgatttgcca 35718812  T
Q  536 cgtgttattttt 547  Q
    | ||| ||||||    
T  35718813 catgtaattttt 35718824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 40493771 - 40493818
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  40493771 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 40493818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 494
Target Start/End: Complemental strand, 6592980 - 6592922
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaatttt 494  Q
    |||||||| ||| |||||||||||||  ||| | ||||||| |||||||||||||||||    
T  6592980 tacaaaactgccccctaagttttgcaactgtagcagttttggcccccaaagccaatttt 6592922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 45395427 - 45395373
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||| | ||||||    
T  45395427 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtataattttt 45395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 1374937 - 1374970
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  1374937 gctgacgtggcaccctaagtgaggtgccacgtgt 1374970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 16043268 - 16043207
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgac 497  Q
    |||| ||||||| |||| ||||||||  ||||| ||||||| ||||||| ||||||||||||    
T  16043268 tacagaaccgccccctatgttttgcatctgtggcagttttggcccccaaggccaattttgac 16043207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 24205470 - 24205437
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  24205470 gctgacgtggcaccctaagtgaggtgccacgtgt 24205437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 39620736 - 39620691
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  39620736 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgt 39620691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Original strand, 43028791 - 43028820
Alignment:
Q  397 aaaggcttaatagcagttttagccccctaa 426  Q
    ||||||||||||||||||||||||||||||    
T  43028791 aaaggcttaatagcagttttagccccctaa 43028820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 450 - 494
Target Start/End: Original strand, 18969177 - 18969221
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaatttt 494  Q
    ||||||||||||  ||| | |||||||||||||||||||||||||    
T  18969177 ctaagttttgcaattgtagcagttttgacccccaaagccaatttt 18969221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 546
Target Start/End: Complemental strand, 19206340 - 19206284
Alignment:
Q  490 attttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    |||||||| ||||||| ||| || || || |||| ||||||||||||||||||||||    
T  19206340 attttgactcggtctacgctaacatgacatcctaagtgaggtgccacgtgttatttt 19206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 427
Target Start/End: Original strand, 34100770 - 34100798
Alignment:
Q  399 aggcttaatagcagttttagccccctaag 427  Q
    |||||||||||||||||||||||||||||    
T  34100770 aggcttaatagcagttttagccccctaag 34100798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 426
Target Start/End: Original strand, 34679095 - 34679123
Alignment:
Q  398 aaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||||    
T  34679095 aaggcttaatagcagttttagccccctaa 34679123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 40711511 - 40711471
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  40711511 gctgacgtgacaccctaagtgaggtgccacgtgtcattttt 40711471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 44436683 - 44436533
Alignment:
Q  398 aaggcttaatagcagttttagccccctaagnnnnnnnt-tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttga 496  Q
    ||||||||||||||||||||||||||||||         |||||||||||| |||||||||||||  ||||| ||||||| ||||||| |||||||||||    
T  44436683 aaggcttaatagcagttttagccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttga 44436584  T
Q  497 cacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    | ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  44436583 ctcggtctacgctgacgtggcaccctaagtgaggtgccacgtgttattttt 44436533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 51315730 - 51315619
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||| ||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  51315730 tacaaaaccgccccctaagttttgcacctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 51315631  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  51315630 cgtgtttttttt 51315619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 436 - 544
Target Start/End: Complemental strand, 578658 - 578551
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||| ||| ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  578658 tacaaaaccgcc-cctaagtttttcacctgtggtagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagcgaggtgcca 578560  T
Q  536 cgtgttatt 544  Q
    |||||||||    
T  578559 cgtgttatt 578551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 1938384 - 1938495
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||| ||||||||||||| ||| ||||| |||||||||| ||||||| |||||| |||||||||| |||||||| ||    
T  1938384 tacaaaaccgccccttaagttttgcacctgtggtagttttggcccacaaagtcaattttgactcggtctacgctgacatggcaccctaagtgaggtgtca 1938483  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  1938484 cgtgttactttt 1938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 33329863 - 33329752
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||||| |||||  ||||| ||||||| |||||||  ||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  33329863 tacaaaaccgtcccctaagtattgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 33329764  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  33329763 cgtgttattttt 33329752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 44586032 - 44585921
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||   ||||| ||||||| ||||||  |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  44586032 tacaaaaccgccccctaagttttgcttctgtggcagttttggcccccacggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 44585933  T
Q  536 cgtgttattttt 547  Q
     |||||||||||    
T  44585932 tgtgttattttt 44585921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 44433310 - 44433200
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| |||||| ||||||| ||||||| |||||||||||| ||||||| ||||| |||||| |||| || ||||| ||    
T  44433310 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaaggccaattttgacccggtctacgctgatgtggca-cctaagttaggtgtca 44433212  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  44433211 cgtgttattttt 44433200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 54719243 - 54719133
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| ||||   || |||| ||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  54719243 tacaaaaccgccccctaagttttgcatatgtaccaggtttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 54719144  T
Q  536 cgtgttatttt 546  Q
     ||||| ||||    
T  54719143 agtgttttttt 54719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 436 - 541
Target Start/End: Complemental strand, 27178393 - 27178288
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||||||||||||||||||| ||||||||||||  |||||| ||||| ||| |||||||||||||||| ||    
T  27178393 tacaaaaccaccccctaagttttgcatctgtggtagttttgacccccaatgccaattttgacttggtctacgctgatgtgtcaccctacgtgaggtgtca 27178294  T
Q  536 cgtgtt 541  Q
    | ||||    
T  27178293 catgtt 27178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 450 - 546
Target Start/End: Original strand, 3916511 - 3916607
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    ||||||||||||  ||||| ||||||| ||||||||| |||||||||| |||||||  || ||||||||||||| ||||||||||||||||||||||    
T  3916511 ctaagttttgcatctgtggcagttttggcccccaaagtcaattttgactcggtctacactaacgtggcaccctaagtgaggtgccacgtgttatttt 3916607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 48348504 - 48348394
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| | ||||||||||| |||||| |||||||||||| ||  ||||||||||| ||||||| ||||||||||||| ||| |||||||||||    
T  48348504 tacaaaatcgccccttaagttttgcatatgtggcagttttgacccc-aagcccaattttgactcggtctacgctgacgtggcacgctaagtgaggtgcca 48348406  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  48348405 cgtgtttttttt 48348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 54464230 - 54464341
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| | | ||||||||||||| |||||| ||||||||||||||| | |||||||||| ||||||| ||| |||||||||| || |||||| |||     
T  54464230 tacaaaactgtcccctaagttttgcatatgtggcagttttgacccccaaggtcaattttgactcggtctacgctcacgtggcaccttaagtgaggcgccg 54464329  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  54464330 cgtgttattttt 54464341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 444 - 544
Target Start/End: Original strand, 25843441 - 25843541
Alignment:
Q  444 cgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttat 543  Q
    |||| |||||||||||||  ||||| |||||||  |||||| |||||||||||| | ||||| ||||||||||||||||| | |||||||||||||||||    
T  25843441 cgccccctaagttttgcatctgtggcagttttggtccccaaggccaattttgacccagtctacgctgacgtggcaccctaagcgaggtgccacgtgttat 25843540  T
Q  544 t 544  Q
    |    
T  25843541 t 25843541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 544
Target Start/End: Complemental strand, 43747526 - 43747418
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  | ||| ||||||| ||||||    |||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  43747526 tacaaaaccgccccctaagttttgcatttatggcagttttggcccccacgatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcca 43747427  T
Q  536 cgtgttatt 544  Q
    |||||||||    
T  43747426 cgtgttatt 43747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 46226764 - 46226876
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||| ||| || |||| ||||||||| ||||| ||||||| ||||| | ||||||||| || |||| || ||||||||||||||||| ||||||||||    
T  46226764 ttacaataccaccccctatgttttgcacctgtggcagttttggcccccgatgccaattttaactcggtatacgctgacgtggcaccctaagtgaggtgcc 46226863  T
Q  535 acgtgttattttt 547  Q
    |||||||| ||||    
T  46226864 acgtgttaatttt 46226876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 1814800 - 1814692
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagc-caattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||| | |||||||||||||    ||| ||||||| ||||| |||  |||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  1814800 tacaaaaccgtcccctaagttttgca----tggcagttttggccccctaagatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 1814705  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  1814704 acgtgttattttt 1814692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 7218397 - 7218286
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||| ||| |||||||||||| ||  ||||| ||||||| ||||||| | ||||||||||  | |||||||||||||| |||| || |||||||||||    
T  7218397 tacaaagccgtctcctaagttttacatctgtggcagttttggcccccaaggtcaattttgacttgatctatgctgacgtgacaccttaagtgaggtgcca 7218298  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  7218297 cgtgttattttt 7218286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 451 - 546
Target Start/End: Complemental strand, 19404625 - 19404530
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    |||||||||||||||||  ||||||| ||||||| ||||||||||||   ||||| ||| ||||| ||||||| ||||||||||||||||||||||    
T  19404625 taagttttgcacatgtgacagttttggcccccaaggccaattttgacttagtctacgctaacgtgacaccctaagtgaggtgccacgtgttatttt 19404530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 20432402 - 20432319
Alignment:
Q  464 tgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||||||||||| | ||||||||||  |||||| |||||||| |||||||| |||||||||||||||||||||||    
T  20432402 tgtggcagttttgacccccaaggacaattttgacttggtctacgctgacgtagcaccctaagtgaggtgccacgtgttattttt 20432319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 86654 - 86752
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||| ||| | ||||||| |||||||  ||||||||||| || |||| |||||| ||| |||||| |||||||||||||||||||||||    
T  86654 cctaagttttgcacttgtagcagttttggcccccaagaccaattttgactcgatctacgctgacatgggaccctaagtgaggtgccacgtgttattttt 86752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 439 - 547
Target Start/End: Original strand, 35359067 - 35359175
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    |||| |||| ||||| |||||||||||||| ||||||| |||| || | |||||||||| ||||||| |||||||||||||| || |||| || ||||||    
T  35359067 aaaatcgccccctaatttttgcacatgtggcagttttggcccctaatgtcaattttgactcggtctacgctgacgtggcaccttaagtgatgtcccacgt 35359166  T
Q  539 gttattttt 547  Q
    ||| |||||    
T  35359167 gtttttttt 35359175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 28712522 - 28712633
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| |||||||||||||  ||| | ||||||  | ||||| ||||| |||||| |||||||  |||||||||||||||| |||||||||||    
T  28712522 tacaaaatcgccccctaagttttgcatctgtagcagttttagcacccaaggccaactttgactcggtctacactgacgtggcaccctaagtgaggtgcca 28712621  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  28712622 cgtgttactttt 28712633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 36567120 - 36567009
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| | | |||| ||||||||  |||  |||||||| ||||||| ||| |||||||| ||||| | ||||||||||||||||| |||||||||||    
T  36567120 tacaaaacagacccctatgttttgcaactgtactagttttggcccccaaggccgattttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 36567021  T
Q  536 cgtgttattttt 547  Q
    ||||| ||||||    
T  36567020 cgtgtcattttt 36567009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 14856789 - 14856691
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| |||||||||||||  ||||||| ||||||| | |||||||||  ||||||| ||||||||| |||| || |||| ||||||||||||||||||    
T  14856789 cctaaattttgcacatgtgccagttttggcccccaatgtcaattttgattcggtctacgctgacgtgacaccttaagtgatgtgccacgtgttattttt 14856691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 435 - 541
Target Start/End: Original strand, 38177243 - 38177349
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||| |||  ||||||||||| |||||  | ||||| ||||||| |||||||||||| |||| |  ||||||||||||||||| ||||||||||    
T  38177243 ttacaaaaccaccttttaagttttgcatatgtgacatttttggcccccaaggccaattttgactcggtttgcgctgacgtggcaccctaagtgaggtgcc 38177342  T
Q  535 acgtgtt 541  Q
    || ||||    
T  38177343 acatgtt 38177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 28204717 - 28204621
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||| |  ||||||||||||| || |||| |||||||||||| |||||||  ||||||||||| ||||  ||||||| ||||||||||||||    
T  28204717 taagttttgtatttgtggtagttttggcctccaatgccaattttgactcggtctacactgacgtggcatcctaattgaggtgtcacgtgttattttt 28204621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 38957914 - 38958015
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||||||| |||||||||||| |||||        |||||||||||| |||| ||||||    
T  38957914 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtc--------cgtggcaccctaagtgatgtgcca 38958005  T
Q  536 cgtgttattt 545  Q
    ||||||||||    
T  38958006 cgtgttattt 38958015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 8025028 - 8024917
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| || | ||||||||||||| |||||||||||||| || ||||  |||||||| || ||||||| ||||||||| || ||||  |||||| |||    
T  8025028 tacaaaatcgtcccctaagttttgcatatgtggtagttttggcctccaagaccaattttaactcggtctacgctgacgtgacatcctaaatgaggtacca 8024929  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  8024928 catgttattttt 8024917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 36687824 - 36687729
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||| ||||||  ||||| | ||||| || |||| | |||||||||| |||| || ||||||||||||||||| ||||||||||||||||||||    
T  36687824 cctaagatttgcatttgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtggcaccctaagtgaggtgccacgtgttatt 36687729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 480 - 544
Target Start/End: Original strand, 44624735 - 44624799
Alignment:
Q  480 cccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||| |||||||| || ||||||||    
T  44624735 cccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgacatgtgttatt 44624799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 36677744 - 36677649
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||| ||||||  ||||| | ||||| || |||| | |||||||||| |||| || |||||||||||||| || ||||||||||||||||||||    
T  36677744 cctaagatttgcatttgtggcaattttggcctccaaggtcaattttgactcggtttacgctgacgtggcaccttaagtgaggtgccacgtgttatt 36677649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 481 - 547
Target Start/End: Original strand, 44127461 - 44127527
Alignment:
Q  481 ccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||| |||||||||||  ||||||| |||||||||||| |||| || ||||||||||||||||||||    
T  44127461 ccaaggccaattttgattcggtctaagctgacgtggcatcctaagtaaggtgccacgtgttattttt 44127527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 52008365 - 52008421
Alignment:
Q  489 aattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    ||||||||| ||||||| ||||||||| ||||||| |||||||| ||||||||||||    
T  52008365 aattttgactcggtctacgctgacgtgacaccctaagtgaggtgtcacgtgttattt 52008421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 455 - 547
Target Start/End: Original strand, 53184596 - 53184687
Alignment:
Q  455 ttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||  ||||| ||||||| || ||||| ||||||||||| ||||||| |||||| || ||||||| |||| ||| ||||||||||||||    
T  53184596 ttttgcatttgtggcagttttg-cctccaaaaccaattttgactcggtctacgctgacttgacaccctaagtgatgtgtcacgtgttattttt 53184687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 12759702 - 12759643
Alignment:
Q  488 caattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||| || |||| ||||||||| ||||||| |||||||||||| ||||||||||    
T  12759702 caattttgactcgatctaggctgacgtgacaccctaagtgaggtgccacatgttattttt 12759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 47189840 - 47189729
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  | |||||||||||  ||||| ||||||||||| |||   ||||||||||   |||||  |||||||| |||| || |||||||| ||    
T  47189840 tacaaaaccgctccataagttttgcatttgtggcagttttgaccctcaagatcaattttgacttcgtctacactgacgtgacaccttaagtgaggtgtca 47189741  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  47189740 cgtgttattttt 47189729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 14340967 - 14340869
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  ||||| ||||||| ||||||| || ||||||||| ||||||| ||| || |||||   || |||||||| || |||||||||||    
T  14340967 cctaagttttgcatttgtggcagttttggcccccaacgctaattttgactcggtctacgctaacatggcaggttaagtgaggtgtcatgtgttattttt 14340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 19391823 - 19391769
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  19391823 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 19391769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 38511845 - 38511791
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  38511845 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgttaatttt 38511791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 544
Target Start/End: Original strand, 3192840 - 3192949
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccc-caaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||| | |||||||||| ||  ||| ||||||| | |||| ||| | |||||||||| |||||||  || || |||||||||| ||||||||||    
T  3192840 tacaaaaccgacccctaagtttttcaactgtagtagtttaggcccctcaaggtcaattttgactcggtctacactaacatggcaccctaagtgaggtgcc 3192939  T
Q  535 acgtgttatt 544  Q
    || |||||||    
T  3192940 acatgttatt 3192949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 15978830 - 15978870
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  15978830 gctgatgtggcaccctaagtgaggtgccacgtgttattttt 15978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 32205021 - 32204981
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  32205021 gctgacgtggcaccctaagtgaggtgccacgtgtcattttt 32204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 257624 - 257577
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  257624 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 257577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 787224 - 787271
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  787224 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 787271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 3212340 - 3212293
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  3212340 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 3212293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 5577058 - 5577105
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  5577058 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 5577105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 469 - 536
Target Start/End: Complemental strand, 14992844 - 14992777
Alignment:
Q  469 tagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    |||||||| ||||||| | |||||||||| | ||||| |||||| ||||||| || ||||||||||||    
T  14992844 tagttttgtcccccaaggtcaattttgactcagtctacgctgacatggcaccttaagtgaggtgccac 14992777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 27748369 - 27748416
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  27748369 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 27748416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 27857323 - 27857276
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  27857323 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 27857276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 28097612 - 28097565
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28097612 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28097565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 28944058 - 28944154
Alignment:
Q  399 aggcttaatagcagttttagccccctaagnnnnnnnt-tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaatttt 494  Q
    |||||||||||||||||||||||||||||         |||| ||  ||| |||||||||||||||||| | ||||||| ||||||| |||||||||    
T  28944058 aggcttaatagcagttttagccccctaagaaaaaaaactacataattgccccctaagttttgcacatgtagcagttttggcccccaaggccaatttt 28944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 28964342 - 28964295
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28964342 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28964295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 30200602 - 30200555
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  30200602 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 30200555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 30760956 - 30761003
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  30760956 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 30761003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 31577544 - 31577591
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  31577544 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 31577591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 32458971 - 32458924
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  32458971 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 32458924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 33252673 - 33252626
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  33252673 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 33252626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 33576597 - 33576550
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  33576597 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 33576550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 33933492 - 33933539
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  33933492 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 33933539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 41223637 - 41223684
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41223637 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41223684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 41282035 - 41281988
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41282035 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41281988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 47530464 - 47530511
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  47530464 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 47530511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 50033429 - 50033382
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  50033429 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 50033382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Original strand, 50802726 - 50802773
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgaccccca 483  Q
    ||||||||  || |||||||||||||||||||| ||||||||||||||    
T  50802726 tacaaaactaccccctaagttttgcacatgtggcagttttgaccccca 50802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 483
Target Start/End: Complemental strand, 50873151 - 50873104
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgaccccca 483  Q
    ||||||||  || |||||||||||||||||||| ||||||||||||||    
T  50873151 tacaaaactaccccctaagttttgcacatgtggcagttttgaccccca 50873104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 51842926 - 51842973
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  51842926 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 51842973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 53191086 - 53191133
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  53191086 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 53191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 53531994 - 53531947
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  53531994 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 53531947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 4474150 - 4474246
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||  ||||| |||||||||||| ||  ||||||||||  ||||||| |||||| || || |||| |||||||| |  |||||||||||    
T  4474150 ctaagttttgcatttgtggcagttttgacccctaagaccaattttgattcggtctacgctgacatgaca-cctaagtgaggtgtcgtgtgttattttt 4474246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 17773163 - 17773196
Alignment:
Q  393 aaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||| |||||||||    
T  17773163 aaataaaggcttaatagcagttttcgccccctaa 17773196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 426
Target Start/End: Original strand, 19074464 - 19074497
Alignment:
Q  393 aaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||| |||||||||    
T  19074464 aaataaaggcttaatagcagttttcgccccctaa 19074497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 25154299 - 25154348
Alignment:
Q  486 gccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| || |||| |||||||||||||| || |||||||||||    
T  25154299 gccaattttgactcgatctacgctgacgtggcaccttaagtgaggtgcca 25154348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 32508093 - 32508060
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  32508093 gctgacgtggcaccctaagtgaggtgccacgtgt 32508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 43586756 - 43586698
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  |||||| ||||||||||||||||| ||||  || ||||||||||||||    
T  43586756 ccaattttgacttggtctacgctgacgtggcaccctaagtga--tgtcacgtgttattttt 43586698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 51214333 - 51214300
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  51214333 gctgacgtggcaccctaagtgaggtgccacgtgt 51214300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 497
Target Start/End: Original strand, 15976318 - 15976366
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgac 497  Q
    |||||||||||||| ||||| ||||||| ||  ||||||||||||||||    
T  15976318 cctaagttttgcacttgtggcagttttggccatcaaagccaattttgac 15976366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 17483731 - 17483699
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||||||| ||||||||||||||||    
T  17483731 ctgacgtggcaccctaagtgaggtgccacgtgt 17483699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 19914615 - 19914655
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  19914615 gctgacgtggcaccttaagtgaggtgccacgtgtcattttt 19914655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 27984306 - 27984274
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||||||| ||||||||||||||||    
T  27984306 ctgacgtggcaccctaagtgaggtgccacgtgt 27984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 37182173 - 37182133
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  37182173 gctgacgtgacaccctaagtgaggtgccacgtgtcattttt 37182133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 38957835 - 38957871
Alignment:
Q  390 ttaaaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||| |||||||||||||||||||||||| |||||    
T  38957835 ttaaaaaaaaggcttaatagcagttttagcctcctaa 38957871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 427
Target Start/End: Original strand, 44436418 - 44436446
Alignment:
Q  399 aggcttaatagcagttttagccccctaag 427  Q
    |||||||||||||||||||||||||||||    
T  44436418 aggcttaatagcagttttagccccctaag 44436446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 399 - 541
Target Start/End: Complemental strand, 39642491 - 39642349
Alignment:
Q  399 aggcttaatagcagttttagccccctaagnnnnnnnttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgaca 498  Q
    |||||||||||||||||||||||||||||        |||||||||||| |||||||||||||  ||||| ||||||| ||||||||||||||||||||     
T  39642491 aggcttaatagcagttttagccccctaagaaaaaaactacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagccaattttgact 39642392  T
Q  499 cggtctatgctgacgtggcaccctacgtgaggtgccacgtgtt 541  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||    
T  39642391 cggtctatgctgacgcggcaccctaagtgaagtgccacgtgtt 39642349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 16874749 - 16874640
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||  ||||| ||||||| | ||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  16874749 tacaaaaccgccccataagttttgcatctgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 16874650  T
Q  536 cgtgttattt 545  Q
    |||| |||||    
T  16874649 cgtgatattt 16874640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 44672379 - 44672491
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| ||||||||||||| |||||| ||||||| | |||||   |||||||||  ||||||| ||||||||||||||||| |||| |||||    
T  44672379 ttacaaaaccgccccctaagttttgcatatgtggcagttttggcgcccaagatcaattttgattcggtctacgctgacgtggcaccctaagtgaagtgcc 44672478  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  44672479 acgtgttattttt 44672491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 14978864 - 14978975
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| ||| |||||||||||||| ||||||||||||| |||| || |||||||||||   |||||| ||||| ||||||||||| |||||||||||    
T  14978864 tacaaaactgccccctaagttttgcacctgtggtagttttggccccaaaggccaattttgaattggtctacgctgatgtggcaccctaagtgaggtgcca 14978963  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  14978964 catgttattttt 14978975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 23220634 - 23220745
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | ||||||||||||||||||  |||||| |||||||  ||||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  23220634 tacaaaaccgccccttaagttttgcacatgtggcggttttggcccccaagaccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcca 23220733  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  23220734 catgtttttttt 23220745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 45739003 - 45739114
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||  | ||| ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  45739003 tacaaaaccgccccttaagttttgcatctatggcagttttggcccccaaagtcaattttgactcggtctatgctaacgtggcaccctaagtgaggtgcca 45739102  T
Q  536 cgtgttattttt 547  Q
    ||| || |||||    
T  45739103 cgtttttttttt 45739114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 3377569 - 3377680
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||| | ||||| |||||||| ||    
T  3377569 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtgacgccctaagtgaggtgtca 3377668  T
Q  536 cgtgttattttt 547  Q
      ||||||||||    
T  3377669 tatgttattttt 3377680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 7579732 - 7579843
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||  ||||||||||||| ||||| | ||||  |||||||||| ||||||||| ||||||| |||||| |||||||||| |||||||||||    
T  7579732 tacaaaaccgcccgctaagttttgcacttgtggcaatttttgcccccaaagctaattttgactcggtctacgctgacatggcaccctaagtgaggtgcca 7579831  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  7579832 catgtttttttt 7579843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 30849476 - 30849365
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | |||||||||||||  |||| |||||||| ||| ||| ||||||||| ||  |||||||||||||||  ||||||| |||||||||||    
T  30849476 tacaaaaccgtcccctaagttttgcatctgtgatagttttggcccacaaggccaattttaacttggtctatgctgacgtaacaccctaagtgaggtgcca 30849377  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  30849376 cgtgttattttt 30849365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 17760752 - 17760862
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || ||||||||||||| |||||| ||||||| || ||||   |||||||||| |||||||  ||||||||||||||||  ||||||||||    
T  17760752 tacaaaaccaccccctaagttttgcatatgtggcagttttggccaccaagatcaattttgactcggtctacactgacgtggcaccctaaatgaggtgcca 17760851  T
Q  536 cgtgttatttt 546  Q
    |||||||||||    
T  17760852 cgtgttatttt 17760862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 435 - 547
Target Start/End: Complemental strand, 32295200 - 32295088
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||| || |||||||||| ||  ||||  ||||||| ||||||||||||||||| || |||||||  | ||||||||||||||  |||||||||    
T  32295200 ttacaaaaccaccacctaagttttacatttgtgacagttttggcccccaaagccaattttaactcggtctacccggacgtggcaccctaaatgaggtgcc 32295101  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  32295100 acgtgttattttt 32295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 440 - 544
Target Start/End: Complemental strand, 50226633 - 50226529
Alignment:
Q  440 aaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtg 539  Q
    ||||||||  ||||||||||||| ||| | ||||||| |||| || || ||| ||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  50226633 aaaccgccctctaagttttgcacctgtagcagttttggccccgaaggctaatattgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtg 50226534  T
Q  540 ttatt 544  Q
    |||||    
T  50226533 ttatt 50226529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 5287457 - 5287362
Alignment:
Q  452 aagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||| ||||||  |||||| |||| || | |||||||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||||    
T  5287457 aagttttgcatatgtggatgttttggccccgaaggtcaattttgactcggtccacgctgacgtggcaccctaagtgaggtgccaagtgttattttt 5287362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 25085623 - 25085530
Alignment:
Q  452 aagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||| || ||||| ||||||| ||| |||   |||||||||| |||||||  |||||||||||||||| |||||||||||||||||||||    
T  25085623 aagttttgtacctgtggcagttttggccctcaagatcaattttgacccggtctacactgacgtggcaccctaagtgaggtgccacgtgttattt 25085530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 544
Target Start/End: Original strand, 44436825 - 44436932
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| | | |||||||||||||| ||||  ||||||| ||||||| | |||||||||| || |||| ||| |||| |||||||| |||||||||||    
T  44436825 tacaaaactgtcccctaagttttgcacttgtgacagttttg-cccccaaggtcaattttgactcgatctacgcttacgtcgcaccctaagtgaggtgcca 44436923  T
Q  536 cgtgttatt 544  Q
    |||||||||    
T  44436924 cgtgttatt 44436932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 547
Target Start/End: Original strand, 25486333 - 25486392
Alignment:
Q  488 caattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  25486333 caattttgactcggtctacgctgacgtggcaccctaaatgaggtgccacgtgttattttt 25486392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 449 - 536
Target Start/End: Complemental strand, 41997874 - 41997787
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    |||||| ||||||  ||||| ||||||| || |||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  41997874 cctaagctttgcatctgtggcagttttggcctccaaggccaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccac 41997787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 470 - 547
Target Start/End: Original strand, 48319505 - 48319582
Alignment:
Q  470 agttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||| | |||||||||| |  || | |||||||||||| |||| |||||||||||||||||||||||    
T  48319505 agttttgacccccaaggtcaattttgactctatcaacgctgacgtggcatcctaagtgaggtgccacgtgttattttt 48319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 50401439 - 50401547
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||| || |||||||||||| |||||||  |||||||| |||| ||  ||||||||||    
T  50401439 tacaaaaccgccccctaagttttgcatttgtgacagttttggcccc-aaggccaattttgactcggtctactctgacgtgacaccttaaatgaggtgcca 50401537  T
Q  536 cgtgttattt 545  Q
    ||| ||||||    
T  50401538 cgtattattt 50401547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 6320631 - 6320740
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||| |||||||  ||||||||||||||||||  |  ||||||| ||| ||||||| |||||||||  || ||| |||||||||||    
T  6320631 tacaaaaccgtcccctaaattttgcatctgtggtagttttgaccccttagaccaatttcgactcggtctacgctgacgtg--acactaagtgaggtgcca 6320728  T
Q  536 cgtgttattttt 547  Q
    ||||| ||||||    
T  6320729 cgtgtgattttt 6320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 46572894 - 46573003
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | |||||||||||||  ||||| ||||| |  |||||| ||||||||||||  |||||| ||||| |||  |||||| |||||||||||    
T  46572894 tacaaaaccgtcccctaagttttgcatttgtggcagtttgg--ccccaaggccaattttgacttggtctacgctgatgtgagaccctaagtgaggtgcca 46572991  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  46572992 cgtgttaatttt 46573003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 46912422 - 46912326
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  | ||| ||||||| |||| || |||||||||||| | || || |||||||||||||||||  |||||||||||||||| |||||    
T  46912422 taagttttgcatctatggcagttttggcccctaatgccaattttgactctgtttacgctgacgtggcaccctaaatgaggtgccacgtgtttttttt 46912326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 49426223 - 49426128
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  ||||| ||||||| |||| || ||||||||||||  |||||| ||||||||| ||||||| || ||||| ||||||||||||||    
T  49426223 taagttttgcatttgtggcagttttggcccc-aatgccaattttgacttggtctacgctgacgtgacaccctaagtaaggtgtcacgtgttattttt 49426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 547
Target Start/End: Complemental strand, 20224749 - 20224666
Alignment:
Q  464 tgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||| ||| ||| | |||||||||| | ||||| |||||||||||||||||  |||||| |||||||||||||||    
T  20224749 tgtggcagttttggccctcaatgacaattttgactctgtctacgctgacgtggcaccctaaatgaggtaccacgtgttattttt 20224666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 12961078 - 12960980
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| |||||||  ||||| ||||||| | || || |||||||||||| ||||||| ||||||||| ||||||| ||||| |||||| |||| |||||    
T  12961078 cctaaattttgcaactgtggcagttttggctccaaaggccaattttgactcggtctacgctgacgtgacaccctaagtgagatgccacatgttcttttt 12960980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 452 - 538
Target Start/End: Complemental strand, 14190772 - 14190686
Alignment:
Q  452 aagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||||||||  ||||| ||||||| || |||| |||||||||||| ||||||| ||||| ||||||| ||| || |||||||||||    
T  14190772 aagttttgcatctgtggcagttttggcctccaatgccaattttgactcggtctacgctgatgtggcactctaagtaaggtgccacgt 14190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 16298290 - 16298192
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||| ||||||||  ||||| ||||||| | |||||   ||||||||||  |||||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  16298290 cctatgttttgcatctgtggcagttttggctcccaatatcaattttgacttggtctacgctgacgtgacactctaagtgaggtgccacgtgttattttt 16298192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 545
Target Start/End: Complemental strand, 7060833 - 7060776
Alignment:
Q  488 caattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||||| |||||||  |||||||||||||||| |||||||||| ||||||||||    
T  7060833 caattttgactcggtctacactgacgtggcaccctaagtgaggtgccgcgtgttattt 7060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 531
Target Start/End: Complemental strand, 6569753 - 6569658
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggt 531  Q
    |||||||||||| | |||||||| ||  ||||| ||||||| ||| |||  ||||||||||  ||||||| ||||||||||||| ||| |||||||    
T  6569753 tacaaaaccgccccttaagttttacatttgtggcagttttggccctcaagaccaattttgattcggtctacgctgacgtggcactctaagtgaggt 6569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 523
Target Start/End: Complemental strand, 8301591 - 8301504
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacccta 523  Q
    |||||||||| | ||||| |||||||  ||||| |||||||||||||||  ||||||||||| |  |||| ||||||||| |||||||    
T  8301591 tacaaaaccgtcccctaaattttgcatctgtggcagttttgacccccaagaccaattttgactcaatctacgctgacgtgacacccta 8301504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 531
Target Start/End: Original strand, 1096536 - 1096630
Alignment:
Q  437 acaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggt 531  Q
    |||||||||||  |||||||| |||  ||||| ||||||| |||| |  | |||||||||| ||||||| |||||||||||| |||| |||||||    
T  1096536 acaaaaccgccctctaagtttcgcatctgtggcagttttggcccctagggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggt 1096630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 4243255 - 4243309
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  4243255 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 4243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 547
Target Start/End: Complemental strand, 18216860 - 18216814
Alignment:
Q  501 gtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  18216860 gtctacgctgacgtggcaccctaagtgaggtgccacgtgtttttttt 18216814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 23208494 - 23208440
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| || |||||||||||||||| |||||||||||||||||| ||||    
T  23208494 ttgactcggtcaatactgacgtggcaccctaagtgaggtgccacgtgttaatttt 23208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 33871019 - 33871073
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  33871019 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 33871073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 489 - 534
Target Start/End: Original strand, 16545681 - 16545726
Alignment:
Q  489 aattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||    
T  16545681 aattttgactcggtctatgctgacgtagcaccctaagtgaggtgcc 16545726  T

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Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 493 - 546
Target Start/End: Original strand, 20017507 - 20017560
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| |||||    
T  20017507 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtaatttt 20017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 547
Target Start/End: Complemental strand, 23480118 - 23480050
Alignment:
Q  478 cccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||| |||||||||||| ||||||| ||||| ||||||||| |  ||||||| ||||||||||||||    
T  23480118 cccccaaggccaattttgactcggtctacgctgatgtggcaccc-aaatgaggtgtcacgtgttattttt 23480050  T

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Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 544
Target Start/End: Complemental strand, 46880937 - 46880880
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    ||||||| ||| ||||||| ||||||||||||||||| |||| |||||| ||||||||    
T  46880937 ccaatttcgactcggtctacgctgacgtggcaccctaagtgatgtgccatgtgttatt 46880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 7598780 - 7598740
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  7598780 gctgacgtggcaccctaagtgaggtgccacgtgtttttttt 7598740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 39427550 - 39427590
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  39427550 gctgacgtggcaccctaagtgaggtgccacgtgtcattttt 39427590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 2371301 - 2371348
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  2371301 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 2371348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 546
Target Start/End: Complemental strand, 9517420 - 9517381
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  9517420 gctgacgtggcaccctaagtgaggtgccacgtgtcatttt 9517381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 15659237 - 15659126
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| || |||||||||| ||||||   ||||| ||| |||  ||||||||||| || |||| | | ||| | ||||||| ||||||| |||    
T  15659237 tacaaaatcgcccccaaagttttgcatatgtggcgattttggccctcaagaccaattttgactcgatctacgttaacgagacaccctaagtgaggttcca 15659138  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  15659137 cgtgttattttt 15659126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 28503260 - 28503307
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28503260 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28503307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 31797253 - 31797206
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  31797253 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 31797206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 34867669 - 34867622
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  34867669 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 34867622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 37029053 - 37029100
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  37029053 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 37029100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 41585410 - 41585457
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41585410 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41585457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 42407008 - 42407055
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  42407008 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 42407055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 45885137 - 45885090
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  45885137 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 45885090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 47113513 - 47113560
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  47113513 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 47113560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 426
Target Start/End: Original strand, 3377497 - 3377527
Alignment:
Q  396 taaaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||||||    
T  3377497 taaaggcttaatagcagttttagccccctaa 3377527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 545
Target Start/End: Complemental strand, 7061403 - 7061365
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  7061403 gctgacgtggcaccctaagtgcggtgccacgtgttattt 7061365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 540
Target Start/End: Complemental strand, 32341707 - 32341633
Alignment:
Q  466 tggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||| |||| |  ||| | ||||| ||||| | ||||||||||||||||| ||||| ||||||||||    
T  32341707 tggtagttttgaacccccattccattgttgactcggtcaacgctgacgtggcaccctaagtgagatgccacgtgt 32341633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 536
Target Start/End: Original strand, 49056222 - 49056292
Alignment:
Q  466 tggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    |||||||||||  |||| || ||| | ||||| ||||| | ||||||||||||||||| ||||||||||||    
T  49056222 tggtagttttggacccccaatccattgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccac 49056292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 52149642 - 52149696
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | |||||| |||||||||| |||||||||||||||||| ||||    
T  52149642 ttgactcggtcaacgctgacatggcaccctaagtgaggtgccacgtgttaatttt 52149696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 520
Target Start/End: Original strand, 8009795 - 8009880
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacc 520  Q
    ||||||||||||  || ||||||||||  ||||  |||||||||| ||||  ||||||||||| || |||| ||||||||| ||||    
T  8009795 ttacaaaaccgctcccgaagttttgcatctgtgacagttttgaccaccaagaccaattttgactcgttctacgctgacgtgacacc 8009880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 12690159 - 12690192
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  12690159 gctgacgtggcaccctaagtgaggtgccacgtgt 12690192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 21727751 - 21727784
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  21727751 gctgacgtggcaccctaagtgaggtgccacgtgt 21727784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 46320814 - 46320847
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  46320814 gctgacgtggcaccctaagtgaggtgccacgtgt 46320847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 46505401 - 46505305
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  || || |||| || |||||||  ||||||||| | |||| || | ||||||| ||||||| |||||||||||| |||| |||||    
T  46505401 taagttttgcatttgcggcagttctggcccccaagaccaattttggctcggtttacgttgacgtgacaccctaagtgaggtgccacatgtttttttt 46505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Complemental strand, 49227289 - 49227257
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||||||| ||||||||||||||||    
T  49227289 ctgacgtggcaccctaagtgaggtgccacgtgt 49227257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 27904729 - 27904620
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||| ||||| ||||||| |||||||  ||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  27904729 tacaaaaccgccccctaagttttgcacttgtggcagttttgtcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 27904630  T
Q  536 cgtgttattt 545  Q
    ||||||||||    
T  27904629 cgtgttattt 27904620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 20512264 - 20512374
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||| ||| || |||||||||| |||||||||||    
T  20512264 tacaaaactgccccctaagttttgcacctgtggtagttttgacccccaagaccaattttgactcggtctacgctaacatggcaccctaagtgaggtgcca 20512363  T
Q  536 cgtgttatttt 546  Q
    |||||||||||    
T  20512364 cgtgttatttt 20512374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 31080544 - 31080654
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| ||||||| ||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  31080544 tacaaaaccaccccctaagttttgcatctgtggcagttttggcccccaaggccaattttaactcggtctatgctgacgtggcaccctaagtgaggtgcca 31080643  T
Q  536 cgtgttatttt 546  Q
    |||||||||||    
T  31080644 cgtgttatttt 31080654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 2974663 - 2974812
Alignment:
Q  399 aggcttaatagcagttttagccccctaagnnnnnnntta-caaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgac 497  Q
    |||||||||||||||||||||||||||||         | |||||||||| |||||||||||||  ||||| ||||||| ||||||| ||||||||||||    
T  2974663 aggcttaatagcagttttagccccctaagaaaaaaaaaaacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaatgccaattttgac 2974762  T
Q  498 acggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
     ||||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  2974763 tcggtctacgctgacgtggcaccctaagtgaggtgccacatgtaattttt 2974812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 437 - 547
Target Start/End: Complemental strand, 12406285 - 12406175
Alignment:
Q  437 acaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||||||||| |||||||||| ||  ||||| ||||||| ||||||| |||||||||||| | ||||| ||||||||||||||||| ||||||||||||    
T  12406285 acaaaaccgccccctaagttttacatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccac 12406186  T
Q  537 gtgttattttt 547  Q
    |||||||||||    
T  12406185 gtgttattttt 12406175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 3333947 - 3333840
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  | ||||||||||| |||||| ||||||| ||||||| | |||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3333947 tacaaaaccgctccataagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 3333848  T
Q  536 cgtgttat 543  Q
     |||||||    
T  3333847 tgtgttat 3333840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 9852854 - 9852965
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| |||||||||||||  ||||| ||||||| | ||||| ||||||||||||  | |||| ||||||||||||||||| |||||||||||    
T  9852854 tacaaaatcgccccctaagttttgcatctgtggcagttttggctcccaaggccaattttgacttgatctacgctgacgtggcaccctaagtgaggtgcca 9852953  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  9852954 cgtgttattttt 9852965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 20629990 - 20629879
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||| || |||   ||||||||||| || |||| ||||||||||||||||| |||||||||||    
T  20629990 tacaaaaccgccccctaagttttgcatttgtggaagttttggcctccaggaccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgcca 20629891  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  20629890 cgtgttattttt 20629879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 435 - 546
Target Start/End: Original strand, 26702503 - 26702613
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| || ||||||||||  ||||| ||||||| |||||||  ||||||||||  |||||||| |||||||||||||||| ||||||||||    
T  26702503 ttacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcc 26702601  T
Q  535 acgtgttatttt 546  Q
    ||||||||||||    
T  26702602 acgtgttatttt 26702613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 435 - 546
Target Start/End: Original strand, 26972236 - 26972346
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| || ||||||||||  ||||| ||||||| |||||||  ||||||||||  |||||||| |||||||||||||||| ||||||||||    
T  26972236 ttacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcc 26972334  T
Q  535 acgtgttatttt 546  Q
    ||||||||||||    
T  26972335 acgtgttatttt 26972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 40276275 - 40276164
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||||||||||| |||||| | ||||||||||||| || ||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  40276275 tacaaaaccgtcccctaagttttgcatatgtggcaattttgacccccaaggctaattttgacccggtctacgctgacgtgacaccctaagtgaggtgcca 40276176  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  40276175 catgtttttttt 40276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 439 - 547
Target Start/End: Complemental strand, 3999341 - 3999233
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    |||||||  ||||||||||| || |||||| ||||||| ||||||| ||||||||||||  |||||| |||||||||||||| || |||||||||||| |    
T  3999341 aaaaccgtatcctaagttttacatatgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccttaagtgaggtgccacat 3999242  T
Q  539 gttattttt 547  Q
    |||||||||    
T  3999241 gttattttt 3999233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 19341010 - 19340899
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||  ||||||||||||||  ||||| ||||||   ||||||||||||||||||| ||||| | | |||||||||||||||  ||||||||||    
T  19341010 tacaaaaccgtttcctaagttttgcatctgtggcagttttagtccccaaagccaattttgactcggtcaacgttgacgtggcaccctaaatgaggtgcca 19340911  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  19340910 cgtgttattttt 19340899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 25910791 - 25910902
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| ||  |||| |||||||| ||||| ||||||| ||||||| | |||||||||| ||||||| ||||||||||||||||| |||||||| ||    
T  25910791 tacaaaaccaccctctaaattttgcacctgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtca 25910890  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  25910891 catgttattttt 25910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 32391965 - 32391854
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||  ||||  |||||||||  ||||  ||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  32391965 tacaaaaccgccccttaagttttgcatgtgtgacagttttgacatccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 32391866  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  32391865 catgttattttt 32391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 16132811 - 16132923
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| |||||||||||||| | ||| |||||||  |||||| ||||||||||||   ||||| ||||| |||||| |||| ||||||||||    
T  16132811 ttacaaaaccgccccctaagttttgcacctatggcagttttggtccccaaggccaattttgactttgtctacgctgatgtggcatcctaagtgaggtgcc 16132910  T
Q  535 acgtgttattttt 547  Q
    | |||||||||||    
T  16132911 atgtgttattttt 16132923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 22300668 - 22300779
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | | ||||||||| | |||||| |||||||||  ||||  ||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  22300668 tacaaaaccgtcccttaagttttgtatatgtggcagttttgacttccaagaccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgcca 22300767  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  22300768 catgttattttt 22300779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 30604333 - 30604222
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||| ||||| |||||||  ||   | |||||||||||| | ||||| ||||||||||||||||| ||||||||||     
T  30604333 tacaaaaccgccccctaagttttgcacctgtggcagttttgcacctgtaggccaattttgactctgtctacgctgacgtggcaccctaagtgaggtgccc 30604234  T
Q  536 cgtgttattttt 547  Q
     |||||||||||    
T  30604233 agtgttattttt 30604222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 37897963 - 37897853
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| |||||| ||||||| || ||||  ||||||||||| |||||||||||||||| ||||| || |||||| ||||    
T  37897963 tacaaaaccgcc-cctaagttttgcatatgtggcagttttggcctccaagaccaattttgactcggtctatgctgacgtagcaccttaagtgaggcgcca 37897865  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  37897864 catgtttttttt 37897853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 436 - 544
Target Start/End: Original strand, 35166363 - 35166471
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| ||||||||||||||||||||  |||||| ||  ||| | |||||||||| ||||||| |||||| || ||||||| |||||||||||    
T  35166363 tacaaaatcgccccctaagttttgcacatgtggcggttttggccttcaatgtcaattttgactcggtctacgctgacatgacaccctaagtgaggtgcca 35166462  T
Q  536 cgtgttatt 544  Q
    | |||||||    
T  35166463 catgttatt 35166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 36798239 - 36798349
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| ||||||| |||||||  ||||||| ||| |||||||  |||||||||||| ||| |||||||||||    
T  36798239 tacaaaaccaccccctaagttttgcatctgtggcagttttggcccccaagaccaattt-gactcggtctacactgacgtggcactctaagtgaggtgcca 36798337  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  36798338 catgttattttt 36798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 43098272 - 43098162
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  |||||||||||||| ||| | ||||||| ||||| |   |||||||||| | ||||| ||||||||||||||||| ||||||||||     
T  43098272 tacaaaaccgcg-cctaagttttgcacctgtagcagttttggcccccgatatcaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccg 43098174  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  43098173 cgtgttattttt 43098162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 18403067 - 18403165
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  | ||| |||||||||||||||  ||||||||||| | ||||| | ||||||||||||||| |||||||| |||||| |||||||    
T  18403067 cctaagttttgcatctctggcagttttgacccccaagaccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgtcacgtgctattttt 18403165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 436 - 521
Target Start/End: Complemental strand, 19131746 - 19131661
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccc 521  Q
    |||||||||||| |||||||||||||  ||||  ||||||| |||| || |||||||||||| ||||||| |||||||||||||||    
T  19131746 tacaaaaccgccccctaagttttgcatctgtgacagttttggccccgaaggccaattttgactcggtctacgctgacgtggcaccc 19131661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 25363892 - 25364004
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| | | |||||||||||||  ||||||||||||| |||| |||| |||||||||  ||||||| ||||||||| |||||||  ||||||| |    
T  25363892 ttacaaaactgtcccctaagttttgcaattgtggtagttttggccccaaaagtcaattttgattcggtctacgctgacgtgacaccctaaatgaggtgtc 25363991  T
Q  535 acgtgttattttt 547  Q
      |||||||||||    
T  25363992 ttgtgttattttt 25364004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 455 - 547
Target Start/End: Original strand, 26563075 - 26563167
Alignment:
Q  455 ttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||  ||||| | ||||| ||||||| | |||||||||| |||| |  |||||||||||||||||||||||||||||||||||| ||||    
T  26563075 ttttgcatctgtggcaattttggcccccaaggtcaattttgactcggtttccgctgacgtggcaccctacgtgaggtgccacgtgttaatttt 26563167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 538
Target Start/End: Original strand, 24405558 - 24405659
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||  ||||||||||||  | ||| ||||||| |||| |  |||||||||||| ||||||||||| ||||||| ||||| |||||||||||    
T  24405558 tacaaaaccgccaactaagttttgcatctttggcagttttggcccc-atggccaattttgactcggtctatgctaacgtggctccctaagtgaggtgcca 24405656  T
Q  536 cgt 538  Q
    |||    
T  24405657 cgt 24405659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 479 - 547
Target Start/End: Complemental strand, 6130461 - 6130393
Alignment:
Q  479 ccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||| | |||||||||| ||||||||| ||||||| ||||||| |||||||||||| ||||||||||    
T  6130461 ccccaaggtcaattttgactcggtctatgttgacgtgacaccctaagtgaggtgccacatgttattttt 6130393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 547
Target Start/End: Complemental strand, 34320226 - 34320082
Alignment:
Q  402 cttaatagcagttttagccccctaagnnnnnnnttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacgg 501  Q
    |||||||| |||||||||||||||||        || ||||| ||| |||||||||| ||  ||||| ||||||| ||||||||| ||||||||||  ||    
T  34320226 cttaatagtagttttagccccctaagaaaaaaaatagaaaac-gccccctaagttttacatttgtggcagttttggcccccaaagtcaattttgacttgg 34320128  T
Q  502 tctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||  |||||||||||||||  ||| ||||| || ||||||||||    
T  34320127 tctacactgacgtggcacccttagtggggtgctacatgttattttt 34320082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 547
Target Start/End: Original strand, 24779385 - 24779452
Alignment:
Q  480 cccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| | ||||| || ||||||||||||||    
T  24779385 cccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgttattttt 24779452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 451 - 545
Target Start/End: Original strand, 28446087 - 28446181
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||||||  ||||  || |||| |||| || |||||||||||| |||| || |||||| || |||||||||||||||| ||||||||||||    
T  28446087 taagttttgcatttgtgacagctttggcccctaaggccaattttgactcggtatacgctgacctgacaccctacgtgaggtgtcacgtgttattt 28446181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 540
Target Start/End: Complemental strand, 40297847 - 40297807
Alignment:
Q  500 ggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  40297847 ggtcaatgctgacgtggcaccctacgtgaggtgccacgtgt 40297807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 25566791 - 25566744
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  25566791 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 25566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 8340171 - 8340101
Alignment:
Q  470 agttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||| |||| |  ||||| ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  8340171 agttttgaacccccagtccaatgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 8340101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 547
Target Start/End: Original strand, 21066472 - 21066518
Alignment:
Q  501 gtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  21066472 gtctacgctgatgtggcaccctaagtgaggtgccacgtgttattttt 21066518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 536
Target Start/End: Original strand, 24134435 - 24134536
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| ||| |||||||||| ||| ||||||||||||  ||| ||| |  || |||||| |||||||||||||| ||| ||  || ||||||||||    
T  24134435 ttacaaaactgccccctaagttttccacttgtggtagttttagccctcaatgttaactttgactcggtctatgctgacatggtactttaagtgaggtgcc 24134534  T
Q  535 ac 536  Q
    ||    
T  24134535 ac 24134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 540
Target Start/End: Original strand, 28736559 - 28736612
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28736559 ccaatgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 545
Target Start/End: Complemental strand, 7623708 - 7623656
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||    
T  7623708 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattt 7623656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 3020782 - 3020735
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  3020782 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 3020735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 4125632 - 4125585
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  4125632 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 4125585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 8755138 - 8755185
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  8755138 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 8755185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 11480223 - 11480176
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  11480223 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 11480176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 16666698 - 16666745
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  16666698 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 16666745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 22925763 - 22925810
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  22925763 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 22925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 28388169 - 28388122
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28388169 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28388122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 28620164 - 28620211
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28620164 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28620211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 33825725 - 33825772
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  33825725 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 33825772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 34168976 - 34168929
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  34168976 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 34168929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 34606558 - 34606511
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  34606558 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 34606511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 35055902 - 35055949
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  35055902 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 35055949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 40768013 - 40768060
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  40768013 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 40768060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 42739775 - 42739728
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  42739775 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 42739728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 19849731 - 19849677
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||| ||||||||||| |||||||||||||||| ||||||    
T  19849731 ttgactcggtcaacgctgatgtggcaccctaagtgaggtgccacgtgtcattttt 19849677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 540
Target Start/End: Complemental strand, 29183346 - 29183276
Alignment:
Q  470 agttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||| ||||||  ||| | ||||| ||||| | ||||| ||||||||||| ||||||||||||||||    
T  29183346 agttttgaaccccaagtccattgttgactcggtcaacgctgatgtggcaccctaggtgaggtgccacgtgt 29183276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 22052578 - 22052611
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  22052578 gctgacgtggcaccctaagtgaggtgccacgtgt 22052611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 26323549 - 26323516
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  26323549 gctgacgtggcaccctaagtgaggtgccacgtgt 26323516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 33204113 - 33204080
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  33204113 gctgacgtggcaccctaagtgaggtgccacgtgt 33204080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 542
Target Start/End: Complemental strand, 34734261 - 34734212
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgtta 542  Q
    ||||| ||||| | ||||||||| ||||||| ||||||||||||||||||    
T  34734261 ttgactcggtcaacgctgacgtgacaccctaggtgaggtgccacgtgtta 34734212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 15526871 - 15526831
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| ||||||||||| |||| ||||||    
T  15526871 gctgacgtggcaccctaagtgaggtgccatgtgtcattttt 15526831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 426
Target Start/End: Complemental strand, 36798492 - 36798464
Alignment:
Q  398 aaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||||    
T  36798492 aaggcttaatagcagttttagccccctaa 36798464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 19275 - 19164
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||| |||||| | |||||||||||||||| |||    
T  19275 tacaaaaccgccccctaagttttgcacatgtggtagttttggcccccaaggccaattttggctcggtctacgctgacatagcaccctacgtgaggtacca 19176  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  19175 cgtgtttttttt 19164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 1e-30; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 436 - 544
Target Start/End: Complemental strand, 20112396 - 20112288
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| || |||||||||| |||||| ||||||| |||||||||||||||||||| ||||| | ||||||||||||| ||| |||||||||||    
T  20112396 tacaaaaccgcccccaaagttttgcatatgtggcagttttggcccccaaagccaattttgactcggtcaacgctgacgtggcactctaagtgaggtgcca 20112297  T
Q  536 cgtgttatt 544  Q
    |||||||||    
T  20112296 cgtgttatt 20112288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 2016859 - 2016969
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| ||| |||||||||||||||||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||| |||    
T  2016859 tacaaaactgccccctaagttttgcacatgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggt-cca 2016957  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  2016958 cgtgtttttttt 2016969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 27978774 - 27978870
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  ||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  27978774 taagttttgcatttgtggcagttttgacccccaaggccaattttgactcggtctacgctgacgtggcaccccacgtgaagtgccacgtgttattttt 27978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 1420790 - 1420679
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||  ||||| |||| |||||||||| |||||||||||| ||||| | ||||||||||||||||| |||||||||||    
T  1420790 tacaaaaccgccccataagttttgcatttgtggcagttatgacccccaaggccaattttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 1420691  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  1420690 cgtgttagtttt 1420679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 2654215 - 2654104
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| ||| ||||||||||||| |||||| ||||||||||||||| ||||||||||||  |||||| ||||||||||||||||| || ||| ||||    
T  2654215 tacaaaactgccccctaagttttgcatatgtggcagttttgacccccaaggccaattttgacttggtctacgctgacgtggcaccctaagtcaggagcca 2654116  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  2654115 catgttattttt 2654104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 2836967 - 2837078
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||  ||||||| ||||||| |||||||||||| | |||||  |||||||||||||||| |||||||||||    
T  2836967 tacaaaaccgccccctaagttttgcatgtgtgagagttttggcccccaaggccaattttgactcagtctacactgacgtggcaccctaagtgaggtgcca 2837066  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  2837067 cgtgttattttt 2837078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 14449530 - 14449419
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  |||||||||||||  ||||| ||||||| ||||||| |||||||||||| |||| || |||||||||||||| || |||||||||||    
T  14449530 tacaaaaccgctccctaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtttacgctgacgtggcaccataagtgaggtgcca 14449431  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  14449430 cgtgttattttt 14449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 21597648 - 21597537
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||| ||||||| |||||| ||||||| |||||||| | ||||||||| ||||||| |||||||||||||||||  ||||||||||    
T  21597648 tacaaaaccgtcccctaaattttgcatatgtggcagttttggcccccaaaactaattttgactcggtctacgctgacgtggcaccctaaatgaggtgcca 21597549  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  21597548 cgtgttattttt 21597537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 53312355 - 53312466
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || ||||| |||||||||||||| ||||||| ||||||| |||||||| ||| | ||||| ||||||||||||||||| |||||||||||    
T  53312355 tacaaaaccaccccctaaattttgcacatgtggcagttttggcccccaaggccaatttggactcagtctacgctgacgtggcaccctaagtgaggtgcca 53312454  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  53312455 cgtgtttttttt 53312466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 43074821 - 43074723
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  ||||| ||||||| ||||||| |||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  43074821 cctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgttattttt 43074723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 439 - 547
Target Start/End: Original strand, 25909558 - 25909666
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||||||| |||||||||||||| |||||  |||||| ||||||| |||||||||||| ||||||| |||||||||||||| || || || ||||||||    
T  25909558 aaaaccgccccctaagttttgcacttgtggaggttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccttaagtaagatgccacgt 25909657  T
Q  539 gttattttt 547  Q
    |||||||||    
T  25909658 gttattttt 25909666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 435 - 547
Target Start/End: Complemental strand, 44356645 - 44356533
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| ||||||||||||| |||||| ||||||| |||||||  |||||||||||  |||||| | | ||||||||||||| |||||||| |    
T  44356645 ttacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacttggtctacgataacgtggcaccctaagtgaggtgtc 44356546  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  44356545 acgtgttattttt 44356533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 51362607 - 51362718
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| |||||| ||||||| |||||||  ||||||||||| | |||||  |||||||||||||||| ||||||| | |    
T  51362607 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgactcagtctacactgacgtggcaccctaagtgaggttcaa 51362706  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  51362707 cgtgttattttt 51362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 451 - 544
Target Start/End: Complemental strand, 4796271 - 4796178
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||||||||| ||||| ||||||| ||||||||  |||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  4796271 taagttttgcacctgtggcagttttggcccccaaaatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgttatt 4796178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 437 - 545
Target Start/End: Original strand, 54855373 - 54855480
Alignment:
Q  437 acaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||||| ||| | |||||||||||  | |||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  54855373 acaaaactgccccttaagttttgcatct-tggtagttttggtccccaaagccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccac 54855471  T
Q  537 gtgttattt 545  Q
     ||||||||    
T  54855472 ttgttattt 54855480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 10059943 - 10059828
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgag----gt 531  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||| ||| |||||||||||| ||||||| | ||||||||||||||| |||||    ||    
T  10059943 tacaaaaccgccccctaagttttgcatctgtggcagttttggccctcaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgcgt 10059844  T
Q  532 gccacgtgttattttt 547  Q
    ||||||||||||||||    
T  10059843 gccacgtgttattttt 10059828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 29697589 - 29697700
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| |||||||||||||  ||||| |||||||    |||| |||||||||||| | ||||| ||||||||||||||||| |||||||| |    
T  29697589 ttacaaaaccgccccctaagttttgcatctgtggcagttttg-gttccaaggccaattttgacccagtctacgctgacgtggcaccctaagtgaggtgtc 29697687  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  29697688 acgtgttattttt 29697700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 51233548 - 51233659
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggt-agttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||| |||||||||||||||||||||  ||||  ||||||| ||||||| |||||||| |||  |||||| ||||||||||||||||| ||||||||||    
T  51233548 tacaataccgcctcctaagttttgcactcgtggacagttttggcccccaa-gccaatttggacttggtctacgctgacgtggcaccctaagtgaggtgcc 51233646  T
Q  535 acgtgttattttt 547  Q
    ||||| |||||||    
T  51233647 acgtggtattttt 51233659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 12719691 - 12719580
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| ||||||| || ||||  ||||||||||| ||||||| ||||| ||||||||| | |||||||||||    
T  12719691 tacaaaaccaccccctaagttttgcatctgtggcagttttggcctccaagaccaattttgactcggtctacgctgatgtggcaccccaagtgaggtgcca 12719592  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  12719591 catgttattttt 12719580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 16292336 - 16292447
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| ||||  ||||||||||||||||||| ||||||| |||||| |   ||||||||| |||||||  |||||||||| ||||| |||||||| ||    
T  16292336 tacaaaatcgccctctaagttttgcacatgtggcagttttggcccccatatgtaattttgactcggtctacactgacgtggccccctaagtgaggtgtca 16292435  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  16292436 cgtgttattttt 16292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 21871633 - 21871522
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||||||||||||||||  | ||||||||||| ||||||||  ||||||| || ||||||| |||||| || ||| ||| ||| |||| ||    
T  21871633 tacaaaaccgcctcctaagttttgcatctttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtca 21871534  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  21871533 cgtgttattttt 21871522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 21927494 - 21927383
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||||||||||||||||  | ||||||||||| ||||||||  ||||||| || ||||||| |||||| || ||| ||| ||| |||| ||    
T  21927494 tacaaaaccgcctcctaagttttgcatctttggtagttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtca 21927395  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  21927394 cgtgttattttt 21927383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 451 - 541
Target Start/End: Original strand, 51371546 - 51371636
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgtt 541  Q
    ||||||||||| || ||| ||||||||||||||| | |||||||||| |||||||  ||||||||||||||||  ||||||||||||||||    
T  51371546 taagttttgcatatatggcagttttgacccccaatgtcaattttgactcggtctacactgacgtggcaccctaaatgaggtgccacgtgtt 51371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 436 - 541
Target Start/End: Complemental strand, 23759820 - 23759715
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||||||||| |  ||||  ||||||| || |||| |||||||||||| || |||| ||||||||||||||||| |||||||||||    
T  23759820 tacaaaaccgtcccctaagttttgtatctgtgacagttttggcctccaaggccaattttgactcgatctaagctgacgtggcaccctaagtgaggtgcca 23759721  T
Q  536 cgtgtt 541  Q
    ||||||    
T  23759720 cgtgtt 23759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 450 - 547
Target Start/End: Complemental strand, 34567848 - 34567751
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||| |||||| ||||||| ||||||| | |||||| ||| ||||| ||||||||||| ||||| | |||| ||||||||||||||||||    
T  34567848 ctaagttttgcatatgtggcagttttggcccccaatgtcaatttcgactcggtcaatgctgacgtgacacccaaagtgaagtgccacgtgttattttt 34567751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 6637309 - 6637198
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| | |||||||||||  | ||| ||||||| ||| ||| |||||||||||| |||||||  ||||| |||||||||| |||||||||||    
T  6637309 tacaaaatcgccccttaagttttgcatttctggcagttttggcccacaatgccaattttgactcggtctacactgacatggcaccctaagtgaggtgcca 6637210  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  6637209 catgttattttt 6637198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 401 - 545
Target Start/End: Complemental strand, 21322992 - 21322848
Alignment:
Q  401 gcttaatagcagttttagccccctaagnnnnnnnttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacg 500  Q
    ||||||||||||||||| ||||| |||        || ||||| ||||||||||||||||| |||||  ||||||||||||||| |||||||||||| ||    
T  21322992 gcttaatagcagttttaacccccaaagaaaaaaactataaaactgcctcctaagttttgcatatgtgacagttttgacccccaatgccaattttgactcg 21322893  T
Q  501 gtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    ||||| ||| ||| | ||| |||  |||| |||||||| ||||||    
T  21322892 gtctacgctaacgcgacactctaaatgagatgccacgtattattt 21322848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 444 - 547
Target Start/End: Complemental strand, 35383997 - 35383894
Alignment:
Q  444 cgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttat 543  Q
    |||||||||||||||||||   ||| ||||||| ||||||| |||||||||||  ||||||| | |||||||||||| || ||||||||||||| ||||     
T  35383997 cgcctcctaagttttgcactattggcagttttggcccccaaggccaattttgattcggtctacgttgacgtggcaccgtaagtgaggtgccacgcgttaa 35383898  T
Q  544 tttt 547  Q
    ||||    
T  35383897 tttt 35383894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 464 - 547
Target Start/End: Original strand, 49185665 - 49185748
Alignment:
Q  464 tgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||| ||||||| ||||||||||||  |||||| ||||||||||||||||| | |||||||||| ||||||||||    
T  49185665 tgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccctaagcgaggtgccacatgttattttt 49185748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 54984079 - 54983969
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| ||||| |||||||||||||  ||||||| | ||||| | |||||||| |  |||||| ||||||||||||||||| ||||||||||     
T  54984079 tacaaaatcgccccctaaattttgcacatgtgtcagttttggcacccaatgtcaattttggcttggtctacgctgacgtggcaccctaagtgaggtgccc 54983980  T
Q  536 cgtgttatttt 546  Q
    | |||||||||    
T  54983979 catgttatttt 54983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 436 - 536
Target Start/End: Original strand, 47999597 - 47999697
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  | |||||||| ||  ||||| |||||||||||| || |||||||||||  ||||||| |||||||||||||| || |||||||||||    
T  47999597 tacaaaaccgctccataagttttacatctgtggcagttttgacccctaaggccaattttgattcggtctacgctgacgtggcaccttaagtgaggtgcca 47999696  T
Q  536 c 536  Q
    |    
T  47999697 c 47999697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 11824257 - 11824366
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| |||||||  ||| || |||||||||||| | ||||| ||||| ||||||||||| |||||||||||    
T  11824257 tacaaaaccgcc-cctaagttttgcatgtgtggcagttttggtccc-aaggccaattttgactcagtctacgctgatgtggcaccctaagtgaggtgcca 11824354  T
Q  536 cgtgttattttt 547  Q
      ||||||||||    
T  11824355 attgttattttt 11824366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 21451526 - 21451636
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| || ||||||| |||||||| ||||| ||||||| || | || || ||||||||| |||||||  |||||||| ||||||| |||||||||||    
T  21451526 tacaaaaacgtctcctaaattttgcacttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgcca 21451624  T
Q  536 cgtgttattttt 547  Q
    ||| ||||||||    
T  21451625 cgtattattttt 21451636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 31553488 - 31553377
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| |||| ||||| |||| ||  | ||| ||||||| ||||||| |||||||||||| ||||||| ||| ||| ||||||||| ||||||||| |    
T  31553488 tacaaaatcgccccctaaattttacatctatggcagttttggcccccaaggccaattttgactcggtctacgctaacgcggcaccctaagtgaggtgcta 31553389  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  31553388 cgtgttaatttt 31553377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 50769432 - 50769542
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  | ||| ||||||  |||| || | |||||||||| ||| ||| |||||||| |||||||  |||||||||||    
T  50769432 tacaaaaccgcc-cctaagttttgcatctatggcagttttagcccctaaggtcaattttgactcggcctacgctgacgtagcaccctgagtgaggtgcca 50769530  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  50769531 cgtgttattttt 50769542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 469 - 547
Target Start/End: Original strand, 35393401 - 35393479
Alignment:
Q  469 tagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||| |||||||  |||||||||||  | |||||||||| ||||||||||| |||||||||||| ||||||||||    
T  35393401 tagttttggcccccaagcccaattttgacttgttctatgctgatgtggcaccctaagtgaggtgccacatgttattttt 35393479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 18937435 - 18937375
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||| || ||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  18937435 ccaatttttactcggtctatgctgacgtgccaccctaagtgaggtaccacgtgttattttt 18937375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 440 - 545
Target Start/End: Original strand, 1571467 - 1571571
Alignment:
Q  440 aaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtg 539  Q
    |||||||||| || |||||||| |||||| ||||||| |  ||||| ||||||| ||| ||| |||  |||||||||||||||| |||||||| || |||    
T  1571467 aaaccgcctcatatgttttgcatatgtggcagttttggcttccaaaaccaatttagactcggcctacactgacgtggcaccctaagtgaggtgtca-gtg 1571565  T
Q  540 ttattt 545  Q
    ||||||    
T  1571566 ttattt 1571571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 547
Target Start/End: Complemental strand, 34771468 - 34771407
Alignment:
Q  486 gccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||| | ||||| | ||| ||||||||||| |||||||||||||||||||||||    
T  34771468 gccaattttgactccgtctacgttgatgtggcaccctaagtgaggtgccacgtgttattttt 34771407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 8965759 - 8965675
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacccta 523  Q
    ||||||||| |||||||||||||  ||||| |||||||  |||||| | |||||||||| ||||||| | ||| |||||||||||    
T  8965759 aaaaccgccccctaagttttgcatctgtggcagttttggtccccaatgtcaattttgactcggtctacgttgatgtggcacccta 8965675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 545
Target Start/End: Complemental strand, 53924984 - 53924888
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||||||||  ||||  ||||||||||| ||| | |||||||||| ||||||| | ||| ||| ||||||| ||||| || ||||||||||||    
T  53924984 cctaagttttgcatttgtgacagttttgaccctcaaggtcaattttgactcggtctacgttgatgtgacaccctaagtgagatgtcacgtgttattt 53924888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 20472674 - 20472721
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  20472674 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 20472721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 26089587 - 26089646
Alignment:
Q  486 gccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||||||| | | ||| ||||||||||||||||| |||| ||||||||||||||||    
T  26089587 gccaattttgactcagactacgctgacgtggcaccctaagtgaagtgccacgtgttattt 26089646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 500 - 546
Target Start/End: Original strand, 8070757 - 8070803
Alignment:
Q  500 ggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||||    
T  8070757 ggtctacgctgacgtggcaccccaagtgaggtgccacgtgttatttt 8070803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 34158661 - 34158607
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  34158661 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 34158607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 529
Target Start/End: Complemental strand, 6207420 - 6207327
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgag 529  Q
    |||||||||||| |||||||||||||  ||||| | ||||| ||||||| | ||||||||||  |||||| ||| | ||||||| ||| |||||    
T  6207420 tacaaaaccgccccctaagttttgcatttgtggcaattttggcccccaaggtcaattttgacttggtctacgctaatgtggcactctaagtgag 6207327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 545
Target Start/End: Original strand, 14016793 - 14016902
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | ||||||||| |  ||||| ||||||| || |||| || |||||||||  |||||| ||||| ||||| ||||   ||||||| ||    
T  14016793 tacaaaaccgccccttaagttttgtatttgtggcagttttggcctccaaggctaattttgacttggtctaggctgatgtggctcccttaatgaggtgtca 14016892  T
Q  536 cgtgttattt 545  Q
    ||||||||||    
T  14016893 cgtgttattt 14016902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 490 - 547
Target Start/End: Complemental strand, 42526155 - 42526098
Alignment:
Q  490 attttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||| | |||||  |||||||| ||||||| |||||||||||||||||||||||    
T  42526155 attttgactcagtctacactgacgtgacaccctaagtgaggtgccacgtgttattttt 42526098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 543
Target Start/End: Complemental strand, 6615039 - 6614983
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttat 543  Q
    ||||||||||| ||||||| |||||| || ||||||| |||||||||||| ||||||    
T  6615039 ccaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgttat 6614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 512
Target Start/End: Complemental strand, 14060949 - 14060873
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgac 512  Q
    |||||||| | | |||||||||| ||  ||||| ||||||| ||||||| || ||||||||| ||||||||||||||    
T  14060949 tacaaaactgtcccctaagttttacatctgtggcagttttggcccccaaggctaattttgactcggtctatgctgac 14060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 532
Target Start/End: Complemental strand, 20118133 - 20118053
Alignment:
Q  452 aagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtg 532  Q
    |||||||||| |||||  ||||||| |||||||  ||||||||||  || |||| || |||||||||||||| ||||||||    
T  20118133 aagttttgcatatgtgccagttttggcccccaagaccaattttgattcgatctacgcggacgtggcaccctaagtgaggtg 20118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 104325 - 104372
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  104325 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 104372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 232880 - 232833
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  232880 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 232833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 6386856 - 6386903
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  6386856 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 6386903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 7119719 - 7119766
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  7119719 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 7119766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 7666386 - 7666339
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  7666386 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 7666339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 8891779 - 8891826
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  8891779 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 8891826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 17554170 - 17554217
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  17554170 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 17554217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 28982038 - 28982085
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28982038 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28982085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 29432235 - 29432188
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  29432235 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 29432188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 37973638 - 37973685
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  37973638 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 37973685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 39946266 - 39946219
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  39946266 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 39946219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 40350961 - 40351008
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  40350961 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 40351008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 41205684 - 41205637
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41205684 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41205637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 52114260 - 52114307
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  52114260 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 52114307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 52310990 - 52310943
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  52310990 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 52310943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 547
Target Start/End: Complemental strand, 6768968 - 6768930
Alignment:
Q  509 tgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  6768968 tgacgtggcaccctaagtgaggtgccacgtgtcattttt 6768930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 27751352 - 27751298
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||| ||||||| ||||||    
T  27751352 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgtcacgtgtgattttt 27751298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 38371452 - 38371398
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| ||||||||| |||||| ||||||    
T  38371452 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgcaacgtgtcattttt 38371398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 50513170 - 50513224
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||| ||| |||||||||||||||| ||||||    
T  50513170 ttgactcggtcaacgctgacgtggcacactaagtgaggtgccacgtgtcattttt 50513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 476
Target Start/End: Complemental strand, 13826257 - 13826220
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttg 476  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  13826257 aaaaccgcctcctaaattttgcccatgtggtagttttg 13826220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 21957713 - 21957668
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccc 481  Q
    ||||||||||||||||||||||||||  ||| | ||||||||||||    
T  21957713 tacaaaaccgcctcctaagttttgcaactgtagcagttttgacccc 21957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 37289594 - 37289627
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  37289594 gctgacgtggcaccctaagtgaggtgccacgtgt 37289627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 39136471 - 39136438
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  39136471 gctgacgtggcaccctaagtgaggtgccacgtgt 39136438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 1571389 - 1571425
Alignment:
Q  390 ttaaaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||| | ||||||    
T  1571389 ttaaaataaaggcttaatagcagttttaacaccctaa 1571425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 426
Target Start/End: Complemental strand, 12719770 - 12719734
Alignment:
Q  390 ttaaaataaaggcttaatagcagttttagccccctaa 426  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  12719770 ttaaaaaaaaggcttaatagcagttttaaccccctaa 12719734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 21537051 - 21537011
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||| ||||||| ||||||    
T  21537051 gctgacgtggcaccctaagtgaggtgtcacgtgtcattttt 21537011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 540
Target Start/End: Original strand, 30998251 - 30998355
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| |||||||| ||||||    | ||| |||||||| |||| |  ||| | ||||| ||||| | ||||| ||||||||||| |||||||||||    
T  30998251 tacaaaacagcctcctatgttttgattctttggcagttttgaacccccagtccagtgttgactcggtcaacgctgatgtggcaccctaagtgaggtgcca 30998350  T
Q  536 cgtgt 540  Q
    |||||    
T  30998351 cgtgt 30998355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 468
Target Start/End: Original strand, 35615382 - 35615414
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtgg 468  Q
    |||||||| ||||||||||||||||||||||||    
T  35615382 tacaaaactgcctcctaagttttgcacatgtgg 35615414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 540
Target Start/End: Complemental strand, 35835966 - 35835918
Alignment:
Q  492 tttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||| ||||| | |||||||||||||| || ||||||||||||||||    
T  35835966 tttgactcggtcaacgctgacgtggcaccttaagtgaggtgccacgtgt 35835918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 508
Target Start/End: Original strand, 52865448 - 52865520
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgc 508  Q
    |||| ||||||| |||||||||||| ||||||  ||||||| ||||  | |||||||||||| ||||| ||||    
T  52865448 tacagaaccgccccctaagttttgcccatgtgccagttttggccccgtaggccaattttgactcggtcaatgc 52865520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 30349416 - 30349527
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||  ||||||||||||||||||||| ||||||| |||| ||||||| | ||||||||||||||| |||||||||||    
T  30349416 tacaaaaccgccccttaagttttgcatctgtggtagttttgacccccaaggccaattatgactcggtctacgttgacgtggcaccctaagtgaggtgcca 30349515  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  30349516 catgttattttt 30349527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 543
Target Start/End: Complemental strand, 6036906 - 6036799
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| | | ||||||||||||| |||||| ||||||||||||||||||||||||||||  ||| |||||||||||| ||||||| |||||||||||    
T  6036906 tacaaaactgtcccctaagttttgcatatgtggcagttttgacccccaaagccaattttgacttggtttatgctgacgtgacaccctaagtgaggtgcca 6036807  T
Q  536 cgtgttat 543  Q
    | ||||||    
T  6036806 catgttat 6036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 436 - 540
Target Start/End: Complemental strand, 26311650 - 26311546
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || | ||||||||||| |||||| ||||||| ||||||| | |||||||||| ||||||| |||||||||||| |||| |||||||||||    
T  26311650 tacaaaaccaccccttaagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcca 26311551  T
Q  536 cgtgt 540  Q
    |||||    
T  26311550 cgtgt 26311546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 435 - 546
Target Start/End: Complemental strand, 266358 - 266248
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| | |||||||||||| ||||| ||||||| |||| ||| ||||||||||  ||||||| ||||||||| || |||| |||||||| |    
T  266358 ttacaaaaccgccccttaagttttgcacctgtggcagttttggccccaaaa-ccaattttgattcggtctacgctgacgtgacatcctaagtgaggtgtc 266260  T
Q  535 acgtgttatttt 546  Q
    ||||||||||||    
T  266259 acgtgttatttt 266248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 10727440 - 10727329
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||||||| ||||||||||||  | |||| |||||||||| |||||| ||||| |||||    
T  10727440 tacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgacttgatctacgctgacgtgggaccctaagtgagatgcca 10727341  T
Q  536 cgtgttattttt 547  Q
    | |||| |||||    
T  10727340 catgtttttttt 10727329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 17532319 - 17532429
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| | |||||||||||| ||||| ||||||| |||| ||||||| ||||||| ||||||| | |||| |||||||| | |||||||||||    
T  17532319 tacaaaaccgccccttaagttttgcacctgtggcagttttggcccctaaagccagttttgactcggtctacgatgacatggcaccc-aagtgaggtgcca 17532417  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  17532418 catgttattttt 17532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 3812821 - 3812918
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||| |||||| ||||||| |||| | | ||||||||||| ||||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  3812821 cctaagttttgcatatgtggcagttttggccccaaga-ccaattttgacccggtctacgctgacgtggcaccctaagtgaggtgctatgtgttattttt 3812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 435 - 545
Target Start/End: Original strand, 32143325 - 32143435
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||||| | |||||||||||| ||||| ||||||| |||||||  ||||||||||| ||||||| | ||| ||||||| ||| |||||||| |    
T  32143325 ttacaaaaccgccccttaagttttgcacctgtggcagttttggcccccaagaccaattttgactcggtctacgttgatgtggcactctaagtgaggtggc 32143424  T
Q  535 acgtgttattt 545  Q
    || ||||||||    
T  32143425 acatgttattt 32143435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 33399852 - 33399963
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||   |||||||||| ||  ||||| ||||||| |||| || | |||||||||| ||||||| ||||||||||||||||| |||| ||| ||    
T  33399852 tacaaaaccggaccctaagttttacatttgtggcagttttggcccctaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgatgtgtca 33399951  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  33399952 cgtgttattttt 33399963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 479 - 547
Target Start/End: Original strand, 11351746 - 11351814
Alignment:
Q  479 ccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||||| || |||||    
T  11351746 ccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtatttttttt 11351814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 1377274 - 1377386
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||| |||| ||||| |||||||  |||||  |||||| ||| ||| ||  |||||||| ||||||||||||| || |||||||| ||||||||||    
T  1377274 ttacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcc 1377373  T
Q  535 acgtgttattttt 547  Q
    || ||| ||||||    
T  1377374 acatgtcattttt 1377386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 547
Target Start/End: Original strand, 1385022 - 1385134
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||| |||| ||||| |||||||  |||||  |||||| ||| ||| ||  |||||||| ||||||||||||| || |||||||| ||||||||||    
T  1385022 ttacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcc 1385121  T
Q  535 acgtgttattttt 547  Q
    || ||| ||||||    
T  1385122 acatgtcattttt 1385134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 451 - 534
Target Start/End: Complemental strand, 239176 - 239093
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||| |||| ||| | ||||||| | ||||| |||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  239176 taagtttagcacctgttgcagttttggcacccaaggccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcc 239093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 515
Target Start/End: Complemental strand, 2853661 - 2853582
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtg 515  Q
    |||||||||||| |||||||||| || |||||| ||||||| ||||||| |||||||||||| |  |||| |||||||||    
T  2853661 tacaaaaccgccccctaagtttttcatatgtggcagttttggcccccaaggccaattttgactcattctacgctgacgtg 2853582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 18031188 - 18031077
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | | ||||||||| |  |||| |||||||| ||| |||   ||||||||||  |||||| ||||||||||||||||| |||||||| ||    
T  18031188 tacaaaaccgtcccttaagttttgtatttgtgatagttttggccctcaagatcaattttgacttggtctacgctgacgtggcaccctaagtgaggtgtca 18031089  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  18031088 cttgttattttt 18031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 5003312 - 5003214
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  ||||| ||||||| | ||||| | ||||||| ||  |||||| ||||||||| ||||||| |||||||| ||| ||||||||||    
T  5003312 cctaagttttgcaattgtggcagttttggctcccaatgtcaattttaacttggtctacgctgacgtgacaccctaagtgaggtgtcacatgttattttt 5003214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 30965814 - 30965863
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  30965814 ttttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 30965863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 444 - 543
Target Start/End: Complemental strand, 20474943 - 20474844
Alignment:
Q  444 cgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttat 543  Q
    |||| |||||||||||||  ||||| ||||||| ||||||| | |||| ||||| |||| || | ||||||||||  ||| |||||||||||||| ||||    
T  20474943 cgccccctaagttttgcatctgtggcagttttggcccccaatgtcaatgttgactcggtatacgttgacgtggcagtctatgtgaggtgccacgtattat 20474844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 7324780 - 7324834
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  7324780 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 7324834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 16765166 - 16765220
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  16765166 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 16765220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 547
Target Start/End: Original strand, 17248706 - 17248815
Alignment:
Q  438 caaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacg 537  Q
    ||||||||||  ||||||||||||  || |  ||||||| |||  ||  ||||||||||  ||||||| | ||||||||||||||| ||||||| || ||    
T  17248706 caaaaccgccctctaagttttgcatctgcgacagttttggcccttaagaccaattttgattcggtctacgttgacgtggcaccctaagtgaggtaccccg 17248805  T
Q  538 tgttattttt 547  Q
    ||||||||||    
T  17248806 tgttattttt 17248815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 435 - 544
Target Start/End: Original strand, 26601527 - 26601636
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||| || |||||||||||||  ||||  || ||||  ||||||  ||||||||||| ||||||| ||||| || |||||||  |||||||| |    
T  26601527 ttacaaaaccaccccctaagttttgcatctgtgacagctttggtccccaagaccaattttgactcggtctacgctgatgtagcacccttagtgaggtgtc 26601626  T
Q  535 acgtgttatt 544  Q
    ||||| ||||    
T  26601627 acgtgctatt 26601636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 2841039 - 2840967
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacccta 523  Q
    |||||||||||  ||||| ||||||| ||| |||| ||||||||||| || |||| | |||||||||||||||    
T  2841039 taagttttgcatttgtggcagttttggcccgcaaaaccaattttgactcgctctacgttgacgtggcacccta 2840967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 2565267 - 2565220
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  2565267 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 2565220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 5606421 - 5606468
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  5606421 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 5606468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 6261506 - 6261553
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  6261506 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 6261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 7391665 - 7391618
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  7391665 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 7391618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 11615023 - 11615070
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  11615023 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 11615070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 21008934 - 21008887
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  21008934 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 21008887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 22279686 - 22279639
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| |||||||||||||| |||| ||||||||||||||||    
T  22279686 ttgactcggtcaatgctgacgtggcatcctaagtgaggtgccacgtgt 22279639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 23291444 - 23291397
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  23291444 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 23291397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 27223497 - 27223450
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  27223497 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 27223450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 31951330 - 31951377
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  31951330 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 31951377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 509 - 547
Target Start/End: Original strand, 12766356 - 12766394
Alignment:
Q  509 tgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  12766356 tgacgtggcactctaagtgaggtgccacgtgttattttt 12766394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 1815150 - 1815117
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  1815150 gctgacgtggcaccctaagtgaggtgccacgtgt 1815117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 2100556 - 2100523
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  2100556 gctgacgtggcaccctaagtgaggtgccacgtgt 2100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 536
Target Start/End: Original strand, 2203286 - 2203331
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||||| ||||||| ||||||||||||||||| || |||||||||    
T  2203286 ttttgactcggtctacgctgacgtggcaccctaagtcaggtgccac 2203331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 6036725 - 6036770
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaatttt 494  Q
    ||||||||||||| |||||| ||||||| ||||||| |||||||||    
T  6036725 cctaagttttgcatatgtggcagttttggcccccaaggccaatttt 6036770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 11277765 - 11277798
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  11277765 gctgacgtggcaccctaagtgaggtgccacgtgt 11277798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 11446151 - 11446118
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  11446151 gctgacgtggcaccctaagtgaggtgccacgtgt 11446118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 13042547 - 13042580
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  13042547 gctgacgtggcaccctaagtgaggtgccacgtgt 13042580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 16735690 - 16735739
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||| ||||| | ||||||||||||||||| |||||||| |||||||    
T  16735690 ttttgactcggtcaacgctgacgtggcaccctaagtgaggtgtcacgtgt 16735739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 18683184 - 18683151
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  18683184 gctgacgtggcaccctaagtgaggtgccacgtgt 18683151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 23883228 - 23883261
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  23883228 gctgacgtggcaccctaagtgaggtgccacgtgt 23883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 536
Target Start/End: Complemental strand, 26171390 - 26171353
Alignment:
Q  499 cggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  26171390 cggtcaatgctgacgtggcaccctaagtgaggtgccac 26171353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 540
Target Start/End: Complemental strand, 27771404 - 27771355
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||| ||||| | ||||||||||||||||| |||||||| |||||||    
T  27771404 ttttgactcggtcaacgctgacgtggcaccctaagtgaggtgtcacgtgt 27771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 28930603 - 28930636
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  28930603 gctgacgtggcaccctaagtgaggtgccacgtgt 28930636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 34705550 - 34705517
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  34705550 gctgacgtggcaccctaagtgaggtgccacgtgt 34705517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 547
Target Start/End: Complemental strand, 8223935 - 8223887
Alignment:
Q  499 cggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||| |||||||||||| ||||  |||||||||||||||| |||||    
T  8223935 cggtctacgctgacgtggcatcctaattgaggtgccacgtgtttttttt 8223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 76930 - 77040
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||| ||||| |||||||||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||| ||    
T  76930 tacaaagccgccccctaagttttgcatttgtggcagttttg-cccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtca 77028  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  77029 cgtgttattttt 77040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 3676374 - 3676263
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||||||  ||||||||||||  ||||| |||||||  ||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  3676374 tacaaaaccgcccactaagttttgcatctgtggcagttttggtccccaaaaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcca 3676275  T
Q  536 cgtgttattttt 547  Q
     |||||||||||    
T  3676274 tgtgttattttt 3676263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 30539237 - 30539126
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | |||||||||||||  ||||| ||||||| ||||||| | |||||||||  ||||||||||||||||||||||||| |||||||||||    
T  30539237 tacaaaaccgtcccctaagttttgcatctgtggcagttttggcccccaatgtcaattttgattcggtctatgctgacgtggcaccctaagtgaggtgcca 30539138  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  30539137 cgtgtttttttt 30539126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 6807415 - 6807304
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| ||||||| ||| ||| | |||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  6807415 tacaaaaccaccccctaagttttgcatttgtggcagttttgtccctcaaggtcaattttgactctgtctacgctgacgtggcaccctaagtgaggtgcca 6807316  T
Q  536 cgtgttattttt 547  Q
    ||||| ||||||    
T  6807315 cgtgtaattttt 6807304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 16982856 - 16982746
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||  ||||||| ||||||| ||||||||||||   ||||| ||||||||||||||| | |||||||||||    
T  16982856 tacaaaaccgccccctaagttttgcatctgtgccagttttg-cccccaaggccaattttgacttagtctacgctgacgtggcaccccaagtgaggtgcca 16982758  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  16982757 cgtgttattttt 16982746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 523
Target Start/End: Complemental strand, 37813337 - 37813250
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacccta 523  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||    
T  37813337 tacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcacccta 37813250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 29044778 - 29044682
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| |||||||||| ||||||  |||||||||||| |||||||||    
T  29044778 taagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggtaccctaaatgaggtgccacgcgttattttt 29044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 29657771 - 29657883
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgaccccc-aaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    |||||||||||| ||||| ||||||| |||||| ||||||| ||||| |||| |||||||||  |||||||  |||||||| ||||||| ||||||||||    
T  29657771 tacaaaaccgccccctaaattttgcatatgtggcagttttggccccccaaagtcaattttgattcggtctacactgacgtgacaccctaagtgaggtgcc 29657870  T
Q  535 acgtgttattttt 547  Q
    ||||||| |||||    
T  29657871 acgtgtttttttt 29657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 21486722 - 21486833
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||| ||||| | ||||| || ||||   ||||||||||  |||||| ||||||||| ||||||| |||||||| ||    
T  21486722 tacaaaaccgccccctaagttttgcacctgtggcatttttggcctccaagatcaattttgacttggtctacgctgacgtgacaccctaagtgaggtgtca 21486821  T
Q  536 cgtgttattttt 547  Q
    ||| ||||||||    
T  21486822 cgtattattttt 21486833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 14880416 - 14880513
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| |||||||  ||||| ||||||| ||||||| ||| |||||||| |||||||||||||||||||| |||| ||||  |||||||||||||||||    
T  14880416 cctaaattttgcatctgtggcagttttggcccccaaggccgattttgactcggtctatgctgacgtggcatcctaagtga-ttgccacgtgttattttt 14880513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 23702368 - 23702270
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  ||||  ||||||| || |||| | |||||||||| | |||||||||||| |||||||||| ||||| |||||||||||||||||    
T  23702368 cctaagttttgcatttgtgacagttttggcctccaaggtcaattttgactcagtctatgctgacatggcaccctaagtgagatgccacgtgttattttt 23702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 27545421 - 27545518
Alignment:
Q  449 cctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||  | ||| ||||||| |||| |||||||||||| || || |||| ||||||||||||||||| ||||||||||||||||| |||||    
T  27545421 cctaagttttgcatctatggcagttttggcccc-aaagccaattttaactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgttgttttt 27545518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 41487456 - 41487346
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||| |  |||||| |||||||  ||||||||||| ||||||| ||||||||| ||| ||| |||||||||||    
T  41487456 tacaaaaccgccccctaagttttgcaactgtagctgttttggcccccaagaccaattttgactcggtctacgctgacgtgacacgctaagtgaggtgcca 41487357  T
Q  536 cgtgttatttt 546  Q
      |||||||||    
T  41487356 tatgttatttt 41487346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 25144024 - 25144121
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||  ||||| ||||||| |  ||||||||||||||||| |||| || |||||||| |||||||| |||| ||||||| ||||||||||    
T  25144024 ctaagttttgcatctgtggcagttttggcatccaaagccaattttgactcggtttacgctgacgttgcaccctaagtgatgtgccacatgttattttt 25144121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 29790839 - 29790936
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||||| |||||||  |||| | | ||||||||||  |||||| ||||||||||||||||| |||| ||| ||| ||||||||||    
T  29790839 ctaagttttgcacatgtggcagttttggtccccgaggtcaattttgacttggtctacgctgacgtggcaccctatgtgaagtgtcacatgttattttt 29790936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 547
Target Start/End: Complemental strand, 17071094 - 17071042
Alignment:
Q  495 gacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  17071094 gacacggtctacgctgacgtggcaccctaagtgaggtgccacgtgttattttt 17071042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 495 - 547
Target Start/End: Original strand, 17577178 - 17577230
Alignment:
Q  495 gacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  17577178 gacacggtctacgctgacgtggcaccctaagtgaggtgccacgtgttattttt 17577230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 33298407 - 33298518
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| || ||| ||||||| |||  ||||| ||||||| | |||||  | ||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  33298407 tacaaaatcgtctcataagtttggcatctgtggcagttttggctcccaagtctaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcca 33298506  T
Q  536 cgtgttattttt 547  Q
    ||||| ||||||    
T  33298507 cgtgtaattttt 33298518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 45177269 - 45177380
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| || | |||||||||||||  ||||  ||||||| ||| ||| || ||||||||| |||||||  |||||||||||||||| |||||||| ||    
T  45177269 tacaaaatcgtcccctaagttttgcatctgtgacagttttggccctcaaggctaattttgactcggtctacactgacgtggcaccctaagtgaggtgtca 45177368  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  45177369 catgttattttt 45177380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 20853444 - 20853555
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || ||||||||||||| |||||| ||||||| |||||||   |||||||||   | |||| | ||||||||||||| |  ||||||||||    
T  20853444 tacaaaaccaccccctaagttttgcatatgtggcagttttggcccccaagatcaattttgaatagatctacgttgacgtggcacccaaaatgaggtgcca 20853543  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  20853544 cgtgtttttttt 20853555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 22192544 - 22192433
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| |||||||||||||||  ||| |  |||||| |  |||| | |||||||||| ||||||| ||| | ||||||||||| |||||||| ||    
T  22192544 tacaaaaccgtctcctaagttttgcaactgtagccgttttggctgccaaggtcaattttgactcggtctacgcttatgtggcaccctaagtgaggtgtca 22192445  T
Q  536 cgtgttattttt 547  Q
    |||||| |||||    
T  22192444 cgtgtttttttt 22192433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 547
Target Start/End: Complemental strand, 35213223 - 35213164
Alignment:
Q  488 caattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||| ||| ||| |||||||||||||| || |||||||||||||||||||||||    
T  35213223 caattttgactcggcctacgctgacgtggcaccttaagtgaggtgccacgtgttattttt 35213164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 502 - 544
Target Start/End: Complemental strand, 37263534 - 37263492
Alignment:
Q  502 tctatgctgacgtggcaccctacgtgaggtgccacgtgttatt 544  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  37263534 tctatgctgacgtggcaccctaagtgaggtgccacgtgttatt 37263492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 521
Target Start/End: Original strand, 37939979 - 37940063
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccc 521  Q
    ||||||||| || ||||||||||||| |||||| ||||||| | || | | ||||||||||| ||||||| |||||||||||||||    
T  37939979 tacaaaaccaccccctaagttttgcatatgtggcagttttggcaccaaga-ccaattttgactcggtctacgctgacgtggcaccc 37940063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 22846526 - 22846622
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||  | ||| ||||||| ||| ||| | |||||||||   |||||| |||||| |||||||||| ||||||||||||||||| |||||    
T  22846526 taagttttgcatctttggcagttttggccctcaagggcaattttgaattggtctacgctgacatggcaccctaagtgaggtgccacgtgtttttttt 22846622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 523
Target Start/End: Complemental strand, 44269350 - 44269278
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacccta 523  Q
    |||||||||||  ||||||||||||| ||||||| |||||||||||| ||  ||| ||||| |||||||||||    
T  44269350 taagttttgcatttgtggtagttttggcccccaatgccaattttgactcgacctacgctgatgtggcacccta 44269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 41602550 - 41602617
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtc 503  Q
    ||||||||| ||  ||||||||||| ||||||| ||||||| ||||| |||||||||||||| |||||    
T  41602550 tacaaaaccacccgctaagttttgcccatgtggcagttttggccccctaagccaattttgactcggtc 41602617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 995182 - 995128
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  995182 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 995128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 540
Target Start/End: Complemental strand, 20057173 - 20057120
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  20057173 ccaatgttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 20057120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 1985757 - 1985710
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  1985757 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 1985710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 536
Target Start/End: Original strand, 4132879 - 4132922
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  4132879 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccac 4132922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 6641786 - 6641739
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  6641786 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 6641739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 6745182 - 6745135
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  6745182 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 6745135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 8834115 - 8834080
Alignment:
Q  505 atgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8834115 atgctgacgtggcaccctaagtgaggtgccacgtgt 8834080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 20095875 - 20095828
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  20095875 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 20095828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 23233968 - 23233921
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  23233968 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 23233921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 28596055 - 28596102
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  28596055 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 28596102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 32318630 - 32318677
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  32318630 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 32318677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 35735628 - 35735675
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||| ||||||||||| ||||||||||||||||    
T  35735628 ttgactcggtcaatgctgatgtggcaccctaagtgaggtgccacgtgt 35735675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 37953499 - 37953546
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  37953499 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 37953546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 38166609 - 38166656
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  38166609 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 38166656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 39626156 - 39626109
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  39626156 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 39626109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 39635706 - 39635659
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  39635706 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 39635659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 41625585 - 41625632
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41625585 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41625632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 41788776 - 41788823
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  41788776 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 41788823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 8287792 - 8287738
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||| ||||||| |||||||||||||||| ||||||    
T  8287792 ttgactcggtcaacgctgacgtgacaccctaagtgaggtgccacgtgtcattttt 8287738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 540
Target Start/End: Complemental strand, 16531436 - 16531390
Alignment:
Q  494 tgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  16531436 tgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 16531390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 547
Target Start/End: Original strand, 37277585 - 37277639
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | |||||||||||| |||| |||||||||||||||| ||||||    
T  37277585 ttgactcggtcaacgctgacgtggcatcctaagtgaggtgccacgtgtcattttt 37277639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 2321655 - 2321688
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  2321655 gctgacgtggcaccctaagtgaggtgccacgtgt 2321688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 4167389 - 4167344
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  4167389 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgt 4167344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 6014592 - 6014559
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  6014592 gctgacgtggcaccctaagtgaggtgccacgtgt 6014559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 426
Target Start/End: Complemental strand, 29044862 - 29044833
Alignment:
Q  397 aaaggcttaatagcagttttagccccctaa 426  Q
    ||||||||||||||||||||||||||||||    
T  29044862 aaaggcttaatagcagttttagccccctaa 29044833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 32332315 - 32332282
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  32332315 gctgacgtggcaccctaagtgaggtgccacgtgt 32332282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 36788448 - 36788403
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  36788448 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgt 36788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 42524882 - 42524849
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  42524882 gctgacgtggcaccctaagtgaggtgccacgtgt 42524849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 44886078 - 44886045
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  44886078 gctgacgtggcaccctaagtgaggtgccacgtgt 44886045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 45209115 - 45209148
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  45209115 gctgacgtggcaccctaagtgaggtgccacgtgt 45209148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 519
Target Start/End: Complemental strand, 521690 - 521607
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcac 519  Q
    ||||||||||||| | |||||||||||| ||| | | ||||| || |||| ||| |||||||| ||| ||| |||||||||||||    
T  521690 ttacaaaaccgcc-cataagttttgcacttgtagcaattttggcctccaaggccgattttgactcggactacgctgacgtggcac 521607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 426
Target Start/End: Complemental strand, 23702450 - 23702422
Alignment:
Q  398 aaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||||    
T  23702450 aaggcttaatagcagttttagccccctaa 23702422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 30358982 - 30359022
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||||||||||||||  ||||||||||||||| ||||||    
T  30358982 gctgacgtggcaccctaaatgaggtgccacgtgtcattttt 30359022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 39515728 - 39515688
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  39515728 gctgatgtggcaccctaagtgaggtgccacgtgtcattttt 39515688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 41602926 - 41602898
Alignment:
Q  399 aggcttaatagcagttttagccccctaag 427  Q
    |||||||||||||||||||||||||||||    
T  41602926 aggcttaatagcagttttagccccctaag 41602898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 18504311 - 18504422
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| |||||| ||||||| || | || |||||||||||| | ||||| ||||||||||||||||| ||||||| |||    
T  18504311 tacaaaaccgccccctaagttttgcatatgtggcagttttggcctctaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggttcca 18504410  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  18504411 cgtgttattttt 18504422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 36580521 - 36580410
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||| ||||||||| |||||||||| ||||||| |||||||||||||||||  ||||||| ||    
T  36580521 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagtcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtca 36580422  T
Q  536 cgtgttattttt 547  Q
    ||||||| ||||    
T  36580421 cgtgttaatttt 36580410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 28786001 - 28785890
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| ||| | |||||||||||  | ||| ||||||||||||||| || ||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  28786001 tacaaaactgccccataagttttgcatttatggcagttttgacccccaaggctaattttgactcggtctacgctgacgtgacaccctaagtgaggtgcca 28785902  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  28785901 cgtgttattttt 28785890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 15029129 - 15029239
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||| | |||||||||| | ||| ||||||||||| |||| || ||||  |||||    
T  15029129 tacaaaaccgccccctaagttttgcacatgtggcagttttggcccccaaggtcaattttgactc-gtccatgctgacgtgacaccttaagtgaaatgcca 15029227  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  15029228 cgtgttattttt 15029239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 15107238 - 15107127
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||  |||||||||||||  ||||| ||||||| || |||| |||||||||||| |||||||  |||| ||||||||||| |||||||||||    
T  15107238 tacaaaaccgctccctaagttttgcatttgtggcagttttggcctccaatgccaattttgactcggtctacactgatgtggcaccctaagtgaggtgcca 15107139  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  15107138 catgttattttt 15107127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 36903331 - 36903441
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||| ||  ||||| ||||||| ||| ||| |||||||||||| ||||||| |||||| |||||||||| |||||||||||    
T  36903331 tacaaaaccgcc-cctaagttttccatctgtggcagttttggccctcaaggccaattttgactcggtctacgctgacatggcaccctaagtgaggtgcca 36903429  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  36903430 catgttattttt 36903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 436 - 545
Target Start/End: Complemental strand, 6726500 - 6726392
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| | || |||||||||||||||||||| ||||||| ||||||| | |||||||||| | || || ||||||||||||||||| |||||||||||    
T  6726500 tacaaaatcaccccctaagttttgcacatgtggcagttttg-cccccaaggacaattttgactcagtttacgctgacgtggcaccctaagtgaggtgcca 6726402  T
Q  536 cgtgttattt 545  Q
    |||| |||||    
T  6726401 cgtgatattt 6726392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 4049776 - 4049888
Alignment:
Q  436 tacaaaaccgcctcctaagt-tttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||||   ||||||| ||||||  ||||| ||||||||||| ||| |||||||||||| || |||| ||||||||||||||||| ||||||||||    
T  4049776 tacaaaaccgttccctaagtctttgcatctgtggcagttttgaccctcaaggccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgcc 4049875  T
Q  535 acgtgttattttt 547  Q
    ||||||| |||||    
T  4049876 acgtgtttttttt 4049888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 8073957 - 8074053
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| |||||| ||||||| ||||||| |||||||||||  ||||||  ||||||||||||| ||| ||||||||||||||||| |||||    
T  8073957 taagttttgcatatgtggcagttttggcccccaaggccaattttgattcggtcttcgctgacgtggcactctaagtgaggtgccacgtgtttttttt 8074053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 41243711 - 41243821
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||  ||||| ||||||   |||||| |||||||||||| ||||||| | ||||||||||||||| |||||||| ||    
T  41243711 tacaaaaccgcc-cctaagttttgcatttgtggcagtttttgtccccaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgtca 41243809  T
Q  536 cgtgttattttt 547  Q
     |||||||||||    
T  41243810 tgtgttattttt 41243821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 439 - 547
Target Start/End: Original strand, 35250189 - 35250297
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    |||||||||  ||||||||||||  | ||  |||||||  |||||| |||||||||||| |||||||  ||||||||||||| || ||||||||||||||    
T  35250189 aaaaccgccctctaagttttgcatctttgacagttttggaccccaaggccaattttgactcggtctacactgacgtggcaccttaagtgaggtgccacgt 35250288  T
Q  539 gttattttt 547  Q
    |||||||||    
T  35250289 gttattttt 35250297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 20184985 - 20185095
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||||| ||||||||||| |||||  ||||||| ||||||| | |||||||||| ||||||| ||||| || ||| |||| |||||||| |     
T  20184985 tacaaaaccgcctcttaagttttgcatatgtgccagttttggcccccaaggtcaattttgactcggtctacgctgatgtagca-cctaagtgaggtgtcg 20185083  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  20185084 cgtgttattttt 20185095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 29834397 - 29834286
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| |||||||||||||| ||||  | ||||  ||||||| | |||||| ||| ||||| | ||||||||| ||||||| |||||||||||    
T  29834397 tacaaaaccgccccctaagttttgcacctgtgacaattttctcccccaaggtcaatttagactcggtccacgctgacgtgacaccctaagtgaggtgcca 29834298  T
Q  536 cgtgttattttt 547  Q
    | ||||||||||    
T  29834297 catgttattttt 29834286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 451 - 545
Target Start/End: Complemental strand, 18186682 - 18186588
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattt 545  Q
    |||||||||||  ||||| |||||||  |||||| |||||||||||| | ||||| | ||||||||||||||| ||||||||||||| |||||||    
T  18186682 taagttttgcatctgtggcagttttggtccccaaggccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgccacgggttattt 18186588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 547
Target Start/End: Complemental strand, 44312989 - 44312878
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| |||||||||||||||||  ||||  ||||||| |  | | | ||||||||||| |||||||||||||| || ||||||| ||||||||||    
T  44312989 ttacaaaactgcctcctaagttttgcatttgtgacagttttggcttcaaga-ccaattttgactcggtctatgctgacatgtcaccctaagtgaggtgcc 44312891  T
Q  535 acgtgttattttt 547  Q
    || ||||||||||    
T  44312890 acatgttattttt 44312878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 14247551 - 14247440
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| |  ||||||||||||||||||| ||||||| |  |||||||||||||| || || |||| ||||| ||||||||||| | ||||||       
T  14247551 tacaaaaccgtccgctaagttttgcacatgtggcagttttggcatccaaagccaattttaactcgatctacgctgatgtggcaccctaagggaggtgttg 14247452  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  14247451 cgtgttattttt 14247440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 436 - 542
Target Start/End: Original strand, 15348019 - 15348124
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||||||  ||||| |||| || ||||||| | |||||||||| ||||||| ||||| ||||||||||| ||||||| |||    
T  15348019 tacaaaaccacc-cctaagttttgcatctgtggaagttatggcccccaaggtcaattttgactcggtctacgctgatgtggcaccctaagtgaggttcca 15348117  T
Q  536 cgtgtta 542  Q
    | |||||    
T  15348118 catgtta 15348124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 436 - 519
Target Start/End: Original strand, 28350184 - 28350267
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcac 519  Q
    |||||||||||| |||||||||||| | ||||| ||||||| |||||||  ||||||||||| || |||| ||||| |||||||    
T  28350184 tacaaaaccgccccctaagttttgcccctgtggcagttttggcccccaagaccaattttgactcgatctacgctgatgtggcac 28350267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 450 - 547
Target Start/End: Original strand, 5172593 - 5172690
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||  ||||| ||||||  | |||||| |||||| |||| ||||||| | |||| | |||||||| ||||||||||| |||||||||||    
T  5172593 ctaagttttgcatctgtggcagttttagctcccaaaaccaattatgactcggtctacgttgacattgcaccctaagtgaggtgccatgtgttattttt 5172690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 436 - 497
Target Start/End: Complemental strand, 9500147 - 9500086
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgac 497  Q
    |||||||||||| |||||||||||  | ||||||||||||| ||||||| ||||||||||||    
T  9500147 tacaaaaccgccccctaagttttgaccttgtggtagttttggcccccaaggccaattttgac 9500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 3319181 - 3319221
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  3319181 gctgacgtggcaccctaagtgaggtgccacgtgttattttt 3319221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 547
Target Start/End: Complemental strand, 40872357 - 40872301
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  40872357 ttttgactcggtctacgctgacgtggcaccctaagtgaggtactacgtgttattttt 40872301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 436 - 540
Target Start/End: Original strand, 47731770 - 47731874
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||| |||||||| ||||||   || ||| |||||||| |||| |  ||| | ||||| ||||| | ||||||||||||||||| |||||||||||    
T  47731770 tacaaaacagcctcctatgttttgattatttggcagttttgaacccctagtccagtgttgactcggtcaacgctgacgtggcaccctaagtgaggtgcca 47731869  T
Q  536 cgtgt 540  Q
    |||||    
T  47731870 cgtgt 47731874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 21782791 - 21782744
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  21782791 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 497300 - 497246
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  497300 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 497246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 23740453 - 23740399
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| |||||||||||||||| ||||||    
T  23740453 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtcattttt 23740399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 547
Target Start/End: Complemental strand, 25987111 - 25987057
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||| |||||    
T  25987111 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtttttttt 25987057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 11374213 - 11374096
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtgg--------caccctacgtg 527  Q
    ||||||||  || |||||||||||||  |||| |||||||| | || || |||||||||||| ||||||| ||||||||||        ||||||| |||    
T  11374213 tacaaaactaccccctaagttttgcatttgtgctagttttggcgcc-aaggccaattttgacccggtctacgctgacgtggcaccttggcaccctaagtg 11374115  T
Q  528 aggtgccacgtgttatttt 546  Q
    |||||||||||||||||||    
T  11374114 aggtgccacgtgttatttt 11374096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 547
Target Start/End: Complemental strand, 10097750 - 10097690
Alignment:
Q  487 ccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| ||||||| | |||||||||||| ||  ||||||| ||||||||||||||    
T  10097750 ccaattttgacccggtctacgttgacgtggcaccataaatgaggtgtcacgtgttattttt 10097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 515
Target Start/End: Original strand, 17876236 - 17876316
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtg 515  Q
    ||||||||| ||| ||||| |||||||  |||||  |||||| || |||| |||||||||||| || ||||||||||||||    
T  17876236 ttacaaaactgccccctaaattttgcatctgtggcggttttggcctccaaggccaattttgactcgatctatgctgacgtg 17876316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 436 - 520
Target Start/End: Complemental strand, 28350389 - 28350307
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcacc 520  Q
    |||||||||||| |||||||||||||| ||||| |||||||  |||||| |||||||||||| | ||||| ||| ||||| ||||    
T  28350389 tacaaaaccgcc-cctaagttttgcacctgtggcagttttg-gccccaaggccaattttgactctgtctacgctaacgtgacacc 28350307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 930833 - 930880
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  930833 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 930880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 7974514 - 7974561
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  7974514 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 7974561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 10319080 - 10319033
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  10319080 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 10319033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 17757951 - 17757904
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  17757951 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 17757904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 18074003 - 18073956
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  18074003 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 18073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 18295977 - 18296024
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  18295977 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 18296024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 21917275 - 21917228
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  21917275 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 21917228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 24236239 - 24236286
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  24236239 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 24236286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 26612467 - 26612514
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  26612467 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 26612514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 30757413 - 30757366
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  30757413 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 30757366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 32555429 - 32555476
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| |||||||||| |||||||| ||||||||||||||||    
T  32555429 ttgactcggtcaatgctgacgtagcaccctaagtgaggtgccacgtgt 32555476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 34288173 - 34288220
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  34288173 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 34288220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 35711845 - 35711798
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  35711845 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 35711798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 36376185 - 36376232
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  36376185 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 36376232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 39976854 - 39976901
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  39976854 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 39976901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 42997240 - 42997193
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  42997240 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 42997193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 45231696 - 45231661
Alignment:
Q  505 atgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||||| ||||||||||||||||    
T  45231696 atgctgacgtggcaccctaagtgaggtgccacgtgt 45231661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 3318383 - 3318453
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtcta 505  Q
    ||||||||||| | | |||||||||||| ||||  | |||||||| ||||| ||||||||||| |||||||    
T  3318383 ttacaaaaccgtcccttaagttttgcacctgtgacatttttgacctccaaaaccaattttgactcggtcta 3318453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 530
Target Start/End: Complemental strand, 24433195 - 24433108
Alignment:
Q  442 accgcctcctaag-ttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgagg 530  Q
    |||||||||| || ||||||| |||||||||||||| || | |||||||||||||||  |||||| ||| |  |||||||||| ||||||    
T  24433195 accgcctccttaggttttgcatatgtggtagttttggcctctaaagccaattttgacttggtctacgctta--tggcaccctaggtgagg 24433108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 426
Target Start/End: Original strand, 28350112 - 28350142
Alignment:
Q  396 taaaggcttaatagcagttttagccccctaa 426  Q
    |||||||||||||||||||||||||||||||    
T  28350112 taaaggcttaatagcagttttagccccctaa 28350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 477
Target Start/End: Original strand, 42256655 - 42256693
Alignment:
Q  439 aaaaccgcctcctaagttttgcacatgtggtagttttga 477  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  42256655 aaaaccgccccctaagttttgcacatgtggcagttttga 42256693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Original strand, 3381930 - 3381975
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccc 481  Q
    |||||||||||| ||||||||||||| |||||| ||||||| ||||    
T  3381930 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccc 3381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 4061163 - 4061130
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  4061163 gctgacgtggcaccctaagtgaggtgccacgtgt 4061130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 7195581 - 7195626
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgt 538  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  7195581 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgt 7195626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 34533387 - 34533354
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  34533387 gctgacgtggcaccctaagtgaggtgccacgtgt 34533354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 18852668 - 18852628
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||| ||||||| ||||||    
T  18852668 gctgacgtggcaccctaagtgaggtgtcacgtgtcattttt 18852628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 547
Target Start/End: Original strand, 28472470 - 28472566
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||  |||||| ||||||  |||||||  ||||||||||  ||||||| | ||||||| ||||||   ||||||||||| |||| |||||    
T  28472470 taagttttgcttatgtggcagttttcgcccccaagaccaattttgattcggtctacgttgacgtgacaccctgaatgaggtgccacatgtttttttt 28472566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 30699163 - 30699195
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||||||| ||||||||||||||||    
T  30699163 ctgacgtggcaccctaagtgaggtgccacgtgt 30699195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 540
Target Start/End: Original strand, 34404583 - 34404615
Alignment:
Q  508 ctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    |||||||||||||||| ||||||||||||||||    
T  34404583 ctgacgtggcaccctaagtgaggtgccacgtgt 34404615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 38879300 - 38879340
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||| |||||||| ||||||| ||||||    
T  38879300 gctgacgtggcaccctaagtgaggtgtcacgtgtcattttt 38879340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 9479 - 9590
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||| | ||||||||||||| |||||| ||||||  ||||||| |||||||||||| ||||||| ||||||||| || | ||  ||||||||||    
T  9479 tacaaaaccgtcccctaagttttgcatatgtggcagttttagcccccaaggccaattttgactcggtctaggctgacgtgacatcttaaatgaggtgcca 9578  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  9579 cgtgttattttt 9590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 145421 - 145532
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||| ||||| | ||| |||||||  ||||| ||||||| ||||||| |||||||||||| ||||||| |||||| ||| |||||| |||||||||||    
T  145421 tacaaagccgccccttaaattttgcatctgtggcagttttggcccccaaggccaattttgactcggtctaggctgacatggaaccctaagtgaggtgcca 145520  T
Q  536 cgtgttattttt 547  Q
    ||||||||||||    
T  145521 cgtgttattttt 145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 436 - 546
Target Start/End: Original strand, 471 - 581
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||||| || |||||||||| || |||||| ||||||| |||||||  ||||||||||| |||||||| ||||||||||||||||  ||||||| ||    
T  471 tacaaaaccaccccctaagttttacatatgtggcagttttggcccccaagaccaattttgactcggtctatactgacgtggcaccctaaatgaggtgtca 570  T
Q  536 cgtgttatttt 546  Q
     ||||||||||    
T  571 tgtgttatttt 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 450 - 546
Target Start/End: Original strand, 19995 - 20091
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttatttt 546  Q
    ||||||||||||  ||||| ||||||| |||||||||||||||||||| || |||| ||| ||||||||||||| |||||||| ||||| |||||||    
T  19995 ctaagttttgcatctgtggcagttttggcccccaaagccaattttgactcgatctacgctaacgtggcaccctaagtgaggtgtcacgttttatttt 20091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 9425 - 9516
Alignment:
Q  456 tttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||||||||||| |||||||   |||||||||| ||||||| |||||||||||| |||| |||||||| ||||||||| ||||    
T  9425 tttgcacatgtggtagttttggcccccaagatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgtcacgtgttaatttt 9516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 436 - 547
Target Start/End: Complemental strand, 25145 - 25035
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    |||||||||||| ||||||||||||| ||| |||||||||| |||| ||| ||||||||||| || |||  ||||||||||||| ||| |||||||||||    
T  25145 tacaaaaccgccccctaagttttgcatatgcggtagttttggccccaaaa-ccaattttgactcgatcttcgctgacgtggcactctaagtgaggtgcca 25047  T
Q  536 cgtgttattttt 547  Q
     ||||| |||||    
T  25046 tgtgtttttttt 25035  T

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Target: scaffold0062 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 435 - 547
Target Start/End: Complemental strand, 46322 - 46210
Alignment:
Q  435 ttacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcc 534  Q
    ||||||||| |||  ||||||||||||  ||||  ||||||| ||||||| | |||||||||| | ||||| ||||||||||||||||| |||||  ||     
T  46322 ttacaaaactgccctctaagttttgcatctgtgacagttttggcccccaaggtcaattttgactcagtctacgctgacgtggcaccctaagtgagacgct 46223  T
Q  535 acgtgttattttt 547  Q
    |||||||||||||    
T  46222 acgtgttattttt 46210  T

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Target: scaffold0372 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 436 - 547
Target Start/End: Original strand, 191 - 301
Alignment:
Q  436 tacaaaaccgcctcctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgcca 535  Q
    ||||||| || ||||||| |||||||| ||||| ||||||| || | || || ||||||||| |||||||  |||||||| ||||||| |||||||||||    
T  191 tacaaaaacgtctcctaaattttgcacttgtggcagttttggccac-aaggcgaattttgactcggtctacactgacgtgacaccctaagtgaggtgcca 289  T
Q  536 cgtgttattttt 547  Q
    ||| ||||||||    
T  290 cgtattattttt 301  T

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Target: scaffold0166 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 547
Target Start/End: Original strand, 21768 - 21835
Alignment:
Q  480 cccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    |||||| ||||||||||| ||||||| ||||||||||||||| | ||||| || ||||||||||||||    
T  21768 cccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgttattttt 21835  T

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Target: scaffold0578 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 450 - 536
Target Start/End: Original strand, 3157 - 3243
Alignment:
Q  450 ctaagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccac 536  Q
    ||||||||||||  ||||| | ||||| ||| ||| | |||||||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  3157 ctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccac 3243  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 547
Target Start/End: Original strand, 93925 - 93981
Alignment:
Q  491 ttttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||| ||||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  93925 ttttgactcggtctacgctgacgtggcaccctaagtgaggtactacgtgttattttt 93981  T

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Target: scaffold0951 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 3830 - 3877
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||    
T  3830 ttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacgtgt 3877  T

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Target: scaffold0864 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0864
Description:

Target: scaffold0864; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 2769 - 2816
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  2769 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 2816  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 10125 - 10078
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  10125 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 10078  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 20814 - 20767
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  20814 ttgactcggtccacgctgacgtggcaccctaagtgaggtgccacgtgt 20767  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 139363 - 139316
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  139363 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 139316  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 400830 - 400877
Alignment:
Q  493 ttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||    
T  400830 ttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgt 400877  T

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Target: scaffold0777 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 8 - 41
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  8 gctgacgtggcaccctaagtgaggtgccacgtgt 41  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Original strand, 1323 - 1356
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  1323 gctgacgtggcaccctaagtgaggtgccacgtgt 1356  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 12832 - 12799
Alignment:
Q  507 gctgacgtggcaccctacgtgaggtgccacgtgt 540  Q
    ||||||||||||||||| ||||||||||||||||    
T  12832 gctgacgtggcaccctaagtgaggtgccacgtgt 12799  T

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Target: scaffold0809 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 547
Target Start/End: Complemental strand, 2991 - 2896
Alignment:
Q  451 taagttttgcacatgtggtagttttgacccccaaagccaattttgacacggtctatgctgacgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||| |||||  ||||||| |||| ||||||||||||||| | |||||   ||||||| |||||||  |||| |||||||| || |||||    
T  2991 taagttttgcatatgtgacagttttggcccc-aaagccaattttgactcagtctactttgacgtgacaccctaaatgagatgccacgtttttttttt 2896  T

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Target: scaffold0725 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 6746 - 6718
Alignment:
Q  399 aggcttaatagcagttttagccccctaag 427  Q
    |||||||||||||||||||||||||||||    
T  6746 aggcttaatagcagttttagccccctaag 6718  T

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Target: scaffold0227 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 511 - 547
Target Start/End: Original strand, 899 - 935
Alignment:
Q  511 acgtggcaccctacgtgaggtgccacgtgttattttt 547  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  899 acgtggcaccctaagtgaggtgccacgtgtcattttt 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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